Multiple sequence alignment - TraesCS2B01G046600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G046600 chr2B 100.000 3828 0 0 3251 7078 23121119 23124946 0.000000e+00 7070.0
1 TraesCS2B01G046600 chr2B 100.000 3075 0 0 1 3075 23117869 23120943 0.000000e+00 5679.0
2 TraesCS2B01G046600 chr2B 83.673 98 12 4 3381 3476 58830699 58830794 9.780000e-14 89.8
3 TraesCS2B01G046600 chr2D 93.046 2157 117 20 4950 7078 12695060 12697211 0.000000e+00 3121.0
4 TraesCS2B01G046600 chr2D 94.082 1318 41 12 1774 3075 12692355 12693651 0.000000e+00 1967.0
5 TraesCS2B01G046600 chr2D 88.493 1347 75 27 3554 4863 12693756 12695059 0.000000e+00 1555.0
6 TraesCS2B01G046600 chr2D 93.556 450 21 3 1324 1773 12691801 12692242 0.000000e+00 664.0
7 TraesCS2B01G046600 chr2D 85.569 589 53 18 110 686 12690657 12691225 7.910000e-164 588.0
8 TraesCS2B01G046600 chr2D 87.613 444 34 8 809 1234 12691289 12691729 4.930000e-136 496.0
9 TraesCS2B01G046600 chr2D 97.727 88 2 0 1 88 12690384 12690471 1.230000e-32 152.0
10 TraesCS2B01G046600 chr2D 96.552 58 2 0 3251 3308 12693702 12693759 5.840000e-16 97.1
11 TraesCS2B01G046600 chr2A 90.596 2063 127 17 4869 6918 14817958 14819966 0.000000e+00 2673.0
12 TraesCS2B01G046600 chr2A 94.845 1358 48 12 1704 3053 14814984 14816327 0.000000e+00 2100.0
13 TraesCS2B01G046600 chr2A 86.459 1381 77 36 3554 4898 14816652 14817958 0.000000e+00 1413.0
14 TraesCS2B01G046600 chr2A 85.390 616 72 12 79 682 14813230 14813839 2.170000e-174 623.0
15 TraesCS2B01G046600 chr2A 88.054 519 43 12 6561 7078 14820284 14820784 1.310000e-166 597.0
16 TraesCS2B01G046600 chr2A 86.345 476 32 14 756 1211 14813869 14814331 8.250000e-134 488.0
17 TraesCS2B01G046600 chr2A 96.591 88 3 0 1 88 14812982 14813069 5.720000e-31 147.0
18 TraesCS2B01G046600 chr2A 96.552 58 2 0 3251 3308 14816598 14816655 5.840000e-16 97.1
19 TraesCS2B01G046600 chr2A 97.959 49 1 0 680 728 7784810 7784858 1.270000e-12 86.1
20 TraesCS2B01G046600 chr5B 89.931 437 21 6 880 1302 440779606 440780033 6.250000e-150 542.0
21 TraesCS2B01G046600 chr5B 92.708 96 6 1 4855 4950 295217364 295217270 3.440000e-28 137.0
22 TraesCS2B01G046600 chrUn 88.724 337 24 5 6743 7078 16236276 16235953 3.980000e-107 399.0
23 TraesCS2B01G046600 chr7B 88.782 312 13 10 975 1285 612595553 612595843 5.220000e-96 363.0
24 TraesCS2B01G046600 chr7B 94.898 98 5 0 1099 1196 629481551 629481454 3.420000e-33 154.0
25 TraesCS2B01G046600 chr7B 93.684 95 6 0 4856 4950 562993166 562993072 7.400000e-30 143.0
26 TraesCS2B01G046600 chr7B 91.176 102 8 1 4849 4950 588875023 588874923 3.440000e-28 137.0
27 TraesCS2B01G046600 chr7B 90.541 74 5 2 3404 3477 659734635 659734706 5.840000e-16 97.1
28 TraesCS2B01G046600 chr7B 80.153 131 19 6 3393 3522 513765010 513765134 2.720000e-14 91.6
29 TraesCS2B01G046600 chr7B 93.443 61 3 1 680 739 719465252 719465192 9.780000e-14 89.8
30 TraesCS2B01G046600 chr7B 100.000 28 0 0 3302 3329 721570828 721570801 1.300000e-02 52.8
31 TraesCS2B01G046600 chr5D 90.265 113 8 3 4840 4950 134782227 134782116 2.060000e-30 145.0
32 TraesCS2B01G046600 chr3D 96.471 85 3 0 4857 4941 360046458 360046542 2.660000e-29 141.0
33 TraesCS2B01G046600 chr3D 93.333 60 4 0 680 739 152672625 152672684 9.780000e-14 89.8
34 TraesCS2B01G046600 chr3D 84.337 83 10 2 680 762 475298875 475298796 2.120000e-10 78.7
35 TraesCS2B01G046600 chr1A 94.505 91 5 0 4860 4950 351606858 351606768 2.660000e-29 141.0
36 TraesCS2B01G046600 chr1A 90.385 104 8 2 4848 4950 49276362 49276260 1.240000e-27 135.0
37 TraesCS2B01G046600 chr6D 93.548 93 6 0 4858 4950 388727652 388727560 9.570000e-29 139.0
38 TraesCS2B01G046600 chr6D 94.828 58 3 0 680 737 4701368 4701311 2.720000e-14 91.6
39 TraesCS2B01G046600 chr6D 98.000 50 1 0 680 729 464673649 464673698 3.520000e-13 87.9
40 TraesCS2B01G046600 chr4B 78.298 235 28 16 3299 3515 145838229 145838458 5.760000e-26 130.0
41 TraesCS2B01G046600 chr4A 85.217 115 15 2 3383 3496 684608039 684607926 4.490000e-22 117.0
42 TraesCS2B01G046600 chr4A 100.000 28 0 0 3302 3329 190821421 190821394 1.300000e-02 52.8
43 TraesCS2B01G046600 chr4A 100.000 28 0 0 3302 3329 567488997 567488970 1.300000e-02 52.8
44 TraesCS2B01G046600 chr6B 96.429 56 2 0 680 735 343624695 343624640 7.560000e-15 93.5
45 TraesCS2B01G046600 chr7D 94.737 57 3 0 680 736 124168179 124168123 9.780000e-14 89.8
46 TraesCS2B01G046600 chr7D 94.737 57 3 0 672 728 631542823 631542767 9.780000e-14 89.8
47 TraesCS2B01G046600 chr3A 100.000 31 0 0 3300 3330 723893576 723893606 2.760000e-04 58.4
48 TraesCS2B01G046600 chr5A 100.000 28 0 0 3302 3329 64382100 64382127 1.300000e-02 52.8
49 TraesCS2B01G046600 chr1D 96.774 31 1 0 3299 3329 9887527 9887557 1.300000e-02 52.8
50 TraesCS2B01G046600 chr1D 100.000 28 0 0 3302 3329 10029061 10029034 1.300000e-02 52.8
51 TraesCS2B01G046600 chr1D 100.000 28 0 0 3302 3329 10062973 10062946 1.300000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G046600 chr2B 23117869 23124946 7077 False 6374.5000 7070 100.00000 1 7078 2 chr2B.!!$F2 7077
1 TraesCS2B01G046600 chr2D 12690384 12697211 6827 False 1080.0125 3121 92.07975 1 7078 8 chr2D.!!$F1 7077
2 TraesCS2B01G046600 chr2A 14812982 14820784 7802 False 1017.2625 2673 90.60400 1 7078 8 chr2A.!!$F2 7077

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
389 563 0.039256 CAACCAAACATGCCTGACGG 60.039 55.0 0.00 0.00 0.00 4.79 F
803 1007 0.107654 GGGGGATTCTGAACCTGACG 60.108 60.0 0.00 0.00 0.00 4.35 F
1293 1524 0.035739 TTTCCTACCTTGGTCACCGC 59.964 55.0 0.00 0.00 0.00 5.68 F
1385 1728 0.252696 TCATGGGCTAGGGTGTGAGT 60.253 55.0 0.00 0.00 0.00 3.41 F
1612 2034 0.253327 GGTCTGGAGGCTTGGGTAAG 59.747 60.0 0.00 0.00 36.97 2.34 F
2359 2916 0.678950 TCGTGCTCAGGTGATCACAA 59.321 50.0 26.47 10.87 40.18 3.33 F
3348 4000 0.249238 GTGCACATTGGTTTCCGCAA 60.249 50.0 13.17 0.00 0.00 4.85 F
3349 4001 0.461548 TGCACATTGGTTTCCGCAAA 59.538 45.0 0.00 0.00 0.00 3.68 F
3871 4527 1.072266 ATCCCTGTTGGCCTGTTGTA 58.928 50.0 3.32 0.00 0.00 2.41 F
5420 6138 0.985490 AAGATGGAGGGTGAGGCCTC 60.985 60.0 26.78 26.78 37.43 4.70 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1274 1505 0.035739 GCGGTGACCAAGGTAGGAAA 59.964 55.000 1.11 0.00 0.00 3.13 R
2187 2744 1.000233 CCCATAGGGCCAGTTTGCA 60.000 57.895 6.18 0.00 35.35 4.08 R
2229 2786 1.796796 GAATGGCCAAGCAGACGAC 59.203 57.895 10.96 0.00 0.00 4.34 R
3329 3981 0.249238 TTGCGGAAACCAATGTGCAC 60.249 50.000 10.75 10.75 31.16 4.57 R
3330 3982 0.461548 TTTGCGGAAACCAATGTGCA 59.538 45.000 0.00 0.00 0.00 4.57 R
3854 4510 0.958822 GTTACAACAGGCCAACAGGG 59.041 55.000 5.01 0.00 40.85 4.45 R
5160 5878 2.354704 CCAGTCTCCTTCACGCCATTTA 60.355 50.000 0.00 0.00 0.00 1.40 R
5250 5968 5.495640 AGGCCACAAATTTGAACAAAAGAA 58.504 33.333 24.64 0.00 33.56 2.52 R
5425 6143 1.081840 GCTCTTGAAACGTGGCTGC 60.082 57.895 0.00 0.00 0.00 5.25 R
6801 7542 1.468127 TGAAAGTGCCGTGCATACATG 59.532 47.619 1.90 0.00 41.91 3.21 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
66 67 6.704310 AGCCAATAAAGAAGTTCATTGCAAT 58.296 32.000 5.99 5.99 0.00 3.56
91 263 1.500108 GAGCTCATCCAAGATCTGCG 58.500 55.000 9.40 0.00 0.00 5.18
94 266 1.596727 GCTCATCCAAGATCTGCGAAC 59.403 52.381 0.00 0.00 0.00 3.95
107 279 3.123804 TCTGCGAACAAGTTGAGTCTTC 58.876 45.455 10.54 1.88 0.00 2.87
108 280 1.858458 TGCGAACAAGTTGAGTCTTCG 59.142 47.619 17.36 17.36 0.00 3.79
197 370 0.107410 TCCACGCCTTGTCACACTTT 60.107 50.000 0.00 0.00 0.00 2.66
198 371 0.738389 CCACGCCTTGTCACACTTTT 59.262 50.000 0.00 0.00 0.00 2.27
263 437 1.815003 AGCATGCCACACTTTCTTAGC 59.185 47.619 15.66 0.00 0.00 3.09
312 486 1.422024 TGCTAACCAACTTAGGCCACA 59.578 47.619 5.01 0.00 33.49 4.17
314 488 2.488153 GCTAACCAACTTAGGCCACAAG 59.512 50.000 5.01 10.74 33.49 3.16
320 494 3.578688 CAACTTAGGCCACAAGCAATTC 58.421 45.455 15.13 0.00 46.50 2.17
329 503 1.112315 ACAAGCAATTCGGCCACCAA 61.112 50.000 2.24 0.00 0.00 3.67
330 504 0.388907 CAAGCAATTCGGCCACCAAG 60.389 55.000 2.24 0.00 0.00 3.61
334 508 1.066929 GCAATTCGGCCACCAAGAAAT 60.067 47.619 2.24 0.00 0.00 2.17
369 543 1.247419 TGTGGCAAAATGCGTAGGGG 61.247 55.000 0.00 0.00 46.21 4.79
388 562 0.664166 GCAACCAAACATGCCTGACG 60.664 55.000 0.00 0.00 36.56 4.35
389 563 0.039256 CAACCAAACATGCCTGACGG 60.039 55.000 0.00 0.00 0.00 4.79
392 566 0.888736 CCAAACATGCCTGACGGTGA 60.889 55.000 0.00 0.00 0.00 4.02
471 645 8.627428 GCGAAAAATATTATCTTGCGATTTACC 58.373 33.333 3.40 0.00 0.00 2.85
477 651 1.281419 TCTTGCGATTTACCCCCTCA 58.719 50.000 0.00 0.00 0.00 3.86
486 660 5.469084 GCGATTTACCCCCTCAGTAAATTAG 59.531 44.000 9.54 8.49 45.72 1.73
498 672 7.589221 CCCTCAGTAAATTAGTATACGACGTTC 59.411 40.741 5.50 0.00 0.00 3.95
513 687 4.275443 ACGACGTTCTAGAGACTTGAAGTT 59.725 41.667 0.00 0.00 0.00 2.66
518 692 7.486647 ACGTTCTAGAGACTTGAAGTTTACAA 58.513 34.615 0.00 0.00 0.00 2.41
525 699 4.822350 AGACTTGAAGTTTACAAAGGGAGC 59.178 41.667 0.00 0.00 0.00 4.70
526 700 4.532834 ACTTGAAGTTTACAAAGGGAGCA 58.467 39.130 0.00 0.00 0.00 4.26
537 711 2.363359 CAAAGGGAGCACTTTTGAAGCT 59.637 45.455 9.44 0.00 38.56 3.74
552 726 7.970614 ACTTTTGAAGCTTCTACACAAGAAAAG 59.029 33.333 26.53 26.53 43.66 2.27
555 729 4.706842 AGCTTCTACACAAGAAAAGGGA 57.293 40.909 0.00 0.00 43.66 4.20
556 730 4.646572 AGCTTCTACACAAGAAAAGGGAG 58.353 43.478 0.00 0.00 43.66 4.30
558 732 4.327680 CTTCTACACAAGAAAAGGGAGGG 58.672 47.826 0.00 0.00 43.66 4.30
568 743 2.165357 AAAGGGAGGGAATGGATTGC 57.835 50.000 0.00 0.00 0.00 3.56
613 796 6.754675 GGGGACAAAATAATGTGAAATTACGG 59.245 38.462 0.00 0.00 32.57 4.02
655 838 1.342076 TGAGACCTAGACCCGAGCAAT 60.342 52.381 0.00 0.00 0.00 3.56
659 842 0.249657 CCTAGACCCGAGCAATCTGC 60.250 60.000 0.00 0.00 45.46 4.26
669 852 3.422122 GCAATCTGCGCAAAATCCA 57.578 47.368 13.05 0.00 31.71 3.41
682 865 4.870426 CGCAAAATCCAGCTCTCTAAACTA 59.130 41.667 0.00 0.00 0.00 2.24
686 869 8.246871 GCAAAATCCAGCTCTCTAAACTAAAAT 58.753 33.333 0.00 0.00 0.00 1.82
689 872 8.669946 AATCCAGCTCTCTAAACTAAAATAGC 57.330 34.615 0.00 0.00 0.00 2.97
690 873 6.273825 TCCAGCTCTCTAAACTAAAATAGCG 58.726 40.000 0.00 0.00 34.01 4.26
693 876 7.115663 CCAGCTCTCTAAACTAAAATAGCGATC 59.884 40.741 0.00 0.00 34.01 3.69
694 877 7.865385 CAGCTCTCTAAACTAAAATAGCGATCT 59.135 37.037 0.00 0.00 34.01 2.75
721 904 9.530633 AAACGCTCTTATATTAGTTTACAGAGG 57.469 33.333 0.00 0.00 31.14 3.69
722 905 7.659186 ACGCTCTTATATTAGTTTACAGAGGG 58.341 38.462 8.36 8.36 42.53 4.30
723 906 7.504911 ACGCTCTTATATTAGTTTACAGAGGGA 59.495 37.037 14.96 0.00 40.49 4.20
724 907 8.024285 CGCTCTTATATTAGTTTACAGAGGGAG 58.976 40.741 4.76 0.00 40.49 4.30
725 908 8.862085 GCTCTTATATTAGTTTACAGAGGGAGT 58.138 37.037 0.00 0.00 0.00 3.85
732 915 7.693969 TTAGTTTACAGAGGGAGTAGTACAC 57.306 40.000 2.52 0.00 0.00 2.90
733 916 5.638133 AGTTTACAGAGGGAGTAGTACACA 58.362 41.667 2.52 0.00 0.00 3.72
734 917 6.073314 AGTTTACAGAGGGAGTAGTACACAA 58.927 40.000 2.52 0.00 0.00 3.33
735 918 6.208994 AGTTTACAGAGGGAGTAGTACACAAG 59.791 42.308 2.52 0.00 0.00 3.16
736 919 4.383931 ACAGAGGGAGTAGTACACAAGA 57.616 45.455 2.52 0.00 0.00 3.02
737 920 4.936802 ACAGAGGGAGTAGTACACAAGAT 58.063 43.478 2.52 0.00 0.00 2.40
738 921 5.334421 ACAGAGGGAGTAGTACACAAGATT 58.666 41.667 2.52 0.00 0.00 2.40
739 922 5.780793 ACAGAGGGAGTAGTACACAAGATTT 59.219 40.000 2.52 0.00 0.00 2.17
740 923 6.270231 ACAGAGGGAGTAGTACACAAGATTTT 59.730 38.462 2.52 0.00 0.00 1.82
741 924 7.453752 ACAGAGGGAGTAGTACACAAGATTTTA 59.546 37.037 2.52 0.00 0.00 1.52
742 925 7.976734 CAGAGGGAGTAGTACACAAGATTTTAG 59.023 40.741 2.52 0.00 0.00 1.85
743 926 7.124448 AGAGGGAGTAGTACACAAGATTTTAGG 59.876 40.741 2.52 0.00 0.00 2.69
744 927 6.156429 AGGGAGTAGTACACAAGATTTTAGGG 59.844 42.308 2.52 0.00 0.00 3.53
745 928 6.070366 GGGAGTAGTACACAAGATTTTAGGGT 60.070 42.308 2.52 0.00 0.00 4.34
746 929 7.124750 GGGAGTAGTACACAAGATTTTAGGGTA 59.875 40.741 2.52 0.00 0.00 3.69
747 930 8.534496 GGAGTAGTACACAAGATTTTAGGGTAA 58.466 37.037 2.52 0.00 0.00 2.85
787 970 3.728385 ATTTGACTGAAGGAGAAGGGG 57.272 47.619 0.00 0.00 0.00 4.79
788 971 1.362224 TTGACTGAAGGAGAAGGGGG 58.638 55.000 0.00 0.00 0.00 5.40
793 997 2.226013 ACTGAAGGAGAAGGGGGATTCT 60.226 50.000 0.00 0.00 42.23 2.40
794 998 2.172293 CTGAAGGAGAAGGGGGATTCTG 59.828 54.545 0.00 0.00 39.63 3.02
795 999 2.225882 TGAAGGAGAAGGGGGATTCTGA 60.226 50.000 0.00 0.00 39.63 3.27
796 1000 2.668850 AGGAGAAGGGGGATTCTGAA 57.331 50.000 0.00 0.00 39.63 3.02
797 1001 2.200955 AGGAGAAGGGGGATTCTGAAC 58.799 52.381 0.00 0.00 39.63 3.18
798 1002 1.213182 GGAGAAGGGGGATTCTGAACC 59.787 57.143 0.00 0.00 39.63 3.62
799 1003 2.200955 GAGAAGGGGGATTCTGAACCT 58.799 52.381 0.00 0.00 39.63 3.50
800 1004 1.918957 AGAAGGGGGATTCTGAACCTG 59.081 52.381 0.00 0.00 38.12 4.00
801 1005 1.916181 GAAGGGGGATTCTGAACCTGA 59.084 52.381 0.00 0.00 0.00 3.86
802 1006 1.290134 AGGGGGATTCTGAACCTGAC 58.710 55.000 0.00 0.00 0.00 3.51
803 1007 0.107654 GGGGGATTCTGAACCTGACG 60.108 60.000 0.00 0.00 0.00 4.35
804 1008 0.107654 GGGGATTCTGAACCTGACGG 60.108 60.000 0.00 0.00 0.00 4.79
806 1010 1.829222 GGGATTCTGAACCTGACGGTA 59.171 52.381 0.00 0.00 44.73 4.02
807 1011 2.159085 GGGATTCTGAACCTGACGGTAG 60.159 54.545 0.00 0.00 44.73 3.18
812 1016 1.887198 CTGAACCTGACGGTAGACACT 59.113 52.381 0.00 0.00 44.73 3.55
813 1017 2.296471 CTGAACCTGACGGTAGACACTT 59.704 50.000 0.00 0.00 44.73 3.16
846 1050 2.481009 GGCGGCGAGAAAAAGAGC 59.519 61.111 12.98 0.00 0.00 4.09
868 1072 6.596621 AGCAGGGAGAAAGAATATACCTTTC 58.403 40.000 16.67 16.67 45.91 2.62
871 1075 5.071923 AGGGAGAAAGAATATACCTTTCCCG 59.928 44.000 19.04 0.00 46.42 5.14
896 1100 2.514824 GGATCCCTTCCGTGCTGC 60.515 66.667 0.00 0.00 33.93 5.25
897 1101 2.514824 GATCCCTTCCGTGCTGCC 60.515 66.667 0.00 0.00 0.00 4.85
902 1106 4.659172 CTTCCGTGCTGCCCCCAA 62.659 66.667 0.00 0.00 0.00 4.12
904 1108 3.521765 TTCCGTGCTGCCCCCAAAT 62.522 57.895 0.00 0.00 0.00 2.32
906 1110 2.361610 CGTGCTGCCCCCAAATCT 60.362 61.111 0.00 0.00 0.00 2.40
909 1113 2.240918 TGCTGCCCCCAAATCTCCT 61.241 57.895 0.00 0.00 0.00 3.69
910 1114 1.454663 GCTGCCCCCAAATCTCCTC 60.455 63.158 0.00 0.00 0.00 3.71
911 1115 1.931007 GCTGCCCCCAAATCTCCTCT 61.931 60.000 0.00 0.00 0.00 3.69
912 1116 0.182299 CTGCCCCCAAATCTCCTCTC 59.818 60.000 0.00 0.00 0.00 3.20
913 1117 1.281925 TGCCCCCAAATCTCCTCTCC 61.282 60.000 0.00 0.00 0.00 3.71
921 1125 3.374098 CCAAATCTCCTCTCCTCTCCTCT 60.374 52.174 0.00 0.00 0.00 3.69
924 1128 0.108585 CTCCTCTCCTCTCCTCTCCG 59.891 65.000 0.00 0.00 0.00 4.63
930 1134 2.277072 CTCTCCTCTCCGCTCCCA 59.723 66.667 0.00 0.00 0.00 4.37
950 1154 3.106054 CAAATCAAATCCCCCATCACCA 58.894 45.455 0.00 0.00 0.00 4.17
1107 1338 3.432051 CTACGCCTTCCGCTCCCTG 62.432 68.421 0.00 0.00 41.76 4.45
1251 1482 4.806339 CCCTCGCCTTCCCCCTCT 62.806 72.222 0.00 0.00 0.00 3.69
1252 1483 2.282446 CCTCGCCTTCCCCCTCTA 59.718 66.667 0.00 0.00 0.00 2.43
1253 1484 1.834822 CCTCGCCTTCCCCCTCTAG 60.835 68.421 0.00 0.00 0.00 2.43
1254 1485 1.834822 CTCGCCTTCCCCCTCTAGG 60.835 68.421 0.00 0.00 0.00 3.02
1255 1486 2.041819 CGCCTTCCCCCTCTAGGT 60.042 66.667 0.00 0.00 0.00 3.08
1256 1487 1.232216 CGCCTTCCCCCTCTAGGTA 59.768 63.158 0.00 0.00 0.00 3.08
1257 1488 0.828343 CGCCTTCCCCCTCTAGGTAG 60.828 65.000 0.00 0.00 0.00 3.18
1258 1489 0.561680 GCCTTCCCCCTCTAGGTAGA 59.438 60.000 0.00 0.00 0.00 2.59
1270 1501 4.783055 CTCTAGGTAGAGGTAGAAGCACA 58.217 47.826 6.17 0.00 44.71 4.57
1271 1502 5.188988 TCTAGGTAGAGGTAGAAGCACAA 57.811 43.478 0.00 0.00 0.00 3.33
1272 1503 5.767670 TCTAGGTAGAGGTAGAAGCACAAT 58.232 41.667 0.00 0.00 0.00 2.71
1273 1504 5.828859 TCTAGGTAGAGGTAGAAGCACAATC 59.171 44.000 0.00 0.00 0.00 2.67
1274 1505 4.615513 AGGTAGAGGTAGAAGCACAATCT 58.384 43.478 0.00 0.00 0.00 2.40
1275 1506 5.026790 AGGTAGAGGTAGAAGCACAATCTT 58.973 41.667 0.00 0.00 0.00 2.40
1276 1507 5.485708 AGGTAGAGGTAGAAGCACAATCTTT 59.514 40.000 0.00 0.00 0.00 2.52
1277 1508 5.813157 GGTAGAGGTAGAAGCACAATCTTTC 59.187 44.000 0.00 0.00 0.00 2.62
1280 1511 5.721960 AGAGGTAGAAGCACAATCTTTCCTA 59.278 40.000 0.00 0.00 33.38 2.94
1285 1516 5.006386 AGAAGCACAATCTTTCCTACCTTG 58.994 41.667 0.00 0.00 0.00 3.61
1293 1524 0.035739 TTTCCTACCTTGGTCACCGC 59.964 55.000 0.00 0.00 0.00 5.68
1298 1529 1.822990 CTACCTTGGTCACCGCTCTAA 59.177 52.381 0.00 0.00 0.00 2.10
1384 1727 1.135094 ATCATGGGCTAGGGTGTGAG 58.865 55.000 0.00 0.00 0.00 3.51
1385 1728 0.252696 TCATGGGCTAGGGTGTGAGT 60.253 55.000 0.00 0.00 0.00 3.41
1387 1730 0.252696 ATGGGCTAGGGTGTGAGTGA 60.253 55.000 0.00 0.00 0.00 3.41
1390 1733 2.330216 GGGCTAGGGTGTGAGTGATAT 58.670 52.381 0.00 0.00 0.00 1.63
1436 1798 2.693591 GGCCCCCTGTTAATTTAAGCTC 59.306 50.000 0.00 0.00 0.00 4.09
1475 1837 0.322322 TGCATCGGAGGTTTAACCGT 59.678 50.000 8.63 0.00 44.90 4.83
1477 1839 1.395954 GCATCGGAGGTTTAACCGTTC 59.604 52.381 8.63 1.66 44.90 3.95
1480 1842 2.758009 TCGGAGGTTTAACCGTTCAAG 58.242 47.619 8.63 1.00 44.90 3.02
1563 1978 9.632807 CTTGTTAGAGCCTATGATCATAGTAAC 57.367 37.037 31.44 29.18 39.23 2.50
1612 2034 0.253327 GGTCTGGAGGCTTGGGTAAG 59.747 60.000 0.00 0.00 36.97 2.34
1637 2059 6.342338 AGTTGGTACTCGAAAGTGAATACT 57.658 37.500 0.00 0.00 39.32 2.12
1638 2060 7.458409 AGTTGGTACTCGAAAGTGAATACTA 57.542 36.000 0.00 0.00 35.69 1.82
1639 2061 7.311408 AGTTGGTACTCGAAAGTGAATACTAC 58.689 38.462 0.00 0.00 35.69 2.73
1689 2111 4.400884 GGCAAATAACATGTGTGGGATGTA 59.599 41.667 0.00 0.00 32.74 2.29
1730 2174 8.942338 ATTTCTTACCTTTTGTTCTGGAAAAC 57.058 30.769 0.00 0.00 0.00 2.43
1868 2425 2.579684 TTTTTGGGTGTTGTGCGGGC 62.580 55.000 0.00 0.00 0.00 6.13
2229 2786 3.261643 TGGCTGGTAGATATGGTATGCAG 59.738 47.826 0.00 0.00 0.00 4.41
2359 2916 0.678950 TCGTGCTCAGGTGATCACAA 59.321 50.000 26.47 10.87 40.18 3.33
2360 2917 1.276138 TCGTGCTCAGGTGATCACAAT 59.724 47.619 26.47 12.26 40.18 2.71
2361 2918 1.395954 CGTGCTCAGGTGATCACAATG 59.604 52.381 26.47 22.41 40.18 2.82
2363 2920 2.816087 GTGCTCAGGTGATCACAATGTT 59.184 45.455 26.47 4.42 40.00 2.71
2365 2922 4.455533 GTGCTCAGGTGATCACAATGTTAA 59.544 41.667 26.47 11.27 40.00 2.01
2366 2923 5.124457 GTGCTCAGGTGATCACAATGTTAAT 59.876 40.000 26.47 0.00 40.00 1.40
2367 2924 5.124297 TGCTCAGGTGATCACAATGTTAATG 59.876 40.000 26.47 11.37 0.00 1.90
2374 2931 6.747280 GGTGATCACAATGTTAATGTACTTGC 59.253 38.462 26.47 0.00 0.00 4.01
2391 2948 8.437360 TGTACTTGCCTGTCATATCTTAATTG 57.563 34.615 0.00 0.00 0.00 2.32
2408 2965 9.754382 ATCTTAATTGTCAATCATAATGGTTGC 57.246 29.630 0.00 0.00 38.32 4.17
2412 2969 3.130869 TGTCAATCATAATGGTTGCTGGC 59.869 43.478 0.00 0.00 38.32 4.85
2540 3099 9.717942 GTCATCATTAGAGCCTTTAATATGTCT 57.282 33.333 0.00 0.00 0.00 3.41
2630 3189 2.905075 TGCTCACTTGCATATTACGCT 58.095 42.857 0.00 0.00 38.12 5.07
2631 3190 4.053469 TGCTCACTTGCATATTACGCTA 57.947 40.909 0.00 0.00 38.12 4.26
2671 3230 7.148137 CCCGTTGTTTATTGTCTATTTAGGCTT 60.148 37.037 0.00 0.00 0.00 4.35
2681 3252 5.480073 TGTCTATTTAGGCTTGTTTGGCATT 59.520 36.000 0.00 0.00 34.73 3.56
2895 3472 5.700832 TGCCTTTTCTACATTGAGTGTACAG 59.299 40.000 0.00 0.00 42.29 2.74
2897 3474 6.872020 GCCTTTTCTACATTGAGTGTACAGTA 59.128 38.462 2.39 0.00 42.29 2.74
3283 3935 3.320826 AGGTTGTGTTATTCTTTGCCACC 59.679 43.478 0.00 0.00 0.00 4.61
3315 3967 8.116679 AGGTTAATTAGTCTAGTACTCCCTCT 57.883 38.462 0.00 0.00 39.80 3.69
3316 3968 8.000127 AGGTTAATTAGTCTAGTACTCCCTCTG 59.000 40.741 0.00 0.00 39.80 3.35
3317 3969 7.779326 GGTTAATTAGTCTAGTACTCCCTCTGT 59.221 40.741 0.00 0.00 39.80 3.41
3318 3970 8.839343 GTTAATTAGTCTAGTACTCCCTCTGTC 58.161 40.741 0.00 0.00 39.80 3.51
3319 3971 3.937778 AGTCTAGTACTCCCTCTGTCC 57.062 52.381 0.00 0.00 30.33 4.02
3320 3972 2.510800 AGTCTAGTACTCCCTCTGTCCC 59.489 54.545 0.00 0.00 30.33 4.46
3321 3973 2.241685 GTCTAGTACTCCCTCTGTCCCA 59.758 54.545 0.00 0.00 0.00 4.37
3322 3974 3.117436 GTCTAGTACTCCCTCTGTCCCAT 60.117 52.174 0.00 0.00 0.00 4.00
3323 3975 4.104420 GTCTAGTACTCCCTCTGTCCCATA 59.896 50.000 0.00 0.00 0.00 2.74
3324 3976 4.730392 TCTAGTACTCCCTCTGTCCCATAA 59.270 45.833 0.00 0.00 0.00 1.90
3325 3977 4.561254 AGTACTCCCTCTGTCCCATAAT 57.439 45.455 0.00 0.00 0.00 1.28
3326 3978 5.681494 AGTACTCCCTCTGTCCCATAATA 57.319 43.478 0.00 0.00 0.00 0.98
3327 3979 6.234404 AGTACTCCCTCTGTCCCATAATAT 57.766 41.667 0.00 0.00 0.00 1.28
3328 3980 7.358255 AGTACTCCCTCTGTCCCATAATATA 57.642 40.000 0.00 0.00 0.00 0.86
3329 3981 7.415086 AGTACTCCCTCTGTCCCATAATATAG 58.585 42.308 0.00 0.00 0.00 1.31
3330 3982 6.234404 ACTCCCTCTGTCCCATAATATAGT 57.766 41.667 0.00 0.00 0.00 2.12
3331 3983 6.019748 ACTCCCTCTGTCCCATAATATAGTG 58.980 44.000 0.00 0.00 0.00 2.74
3332 3984 4.777896 TCCCTCTGTCCCATAATATAGTGC 59.222 45.833 0.00 0.00 0.00 4.40
3333 3985 4.532126 CCCTCTGTCCCATAATATAGTGCA 59.468 45.833 0.00 0.00 0.00 4.57
3334 3986 5.482908 CCTCTGTCCCATAATATAGTGCAC 58.517 45.833 9.40 9.40 0.00 4.57
3335 3987 5.012046 CCTCTGTCCCATAATATAGTGCACA 59.988 44.000 21.04 5.47 0.00 4.57
3336 3988 6.296087 CCTCTGTCCCATAATATAGTGCACAT 60.296 42.308 21.04 12.77 0.00 3.21
3337 3989 7.078249 TCTGTCCCATAATATAGTGCACATT 57.922 36.000 21.04 12.59 0.00 2.71
3338 3990 6.936335 TCTGTCCCATAATATAGTGCACATTG 59.064 38.462 21.04 5.80 0.00 2.82
3339 3991 6.003326 TGTCCCATAATATAGTGCACATTGG 58.997 40.000 21.04 13.41 0.00 3.16
3340 3992 6.003950 GTCCCATAATATAGTGCACATTGGT 58.996 40.000 21.04 0.00 0.00 3.67
3341 3993 6.490040 GTCCCATAATATAGTGCACATTGGTT 59.510 38.462 21.04 9.40 0.00 3.67
3342 3994 7.014230 GTCCCATAATATAGTGCACATTGGTTT 59.986 37.037 21.04 7.25 0.00 3.27
3343 3995 7.230510 TCCCATAATATAGTGCACATTGGTTTC 59.769 37.037 21.04 0.00 0.00 2.78
3344 3996 7.370383 CCATAATATAGTGCACATTGGTTTCC 58.630 38.462 21.04 0.00 0.00 3.13
3345 3997 5.499139 AATATAGTGCACATTGGTTTCCG 57.501 39.130 21.04 0.00 0.00 4.30
3346 3998 0.878416 TAGTGCACATTGGTTTCCGC 59.122 50.000 21.04 0.00 0.00 5.54
3347 3999 1.106351 AGTGCACATTGGTTTCCGCA 61.106 50.000 21.04 0.00 0.00 5.69
3348 4000 0.249238 GTGCACATTGGTTTCCGCAA 60.249 50.000 13.17 0.00 0.00 4.85
3349 4001 0.461548 TGCACATTGGTTTCCGCAAA 59.538 45.000 0.00 0.00 0.00 3.68
3350 4002 1.134699 TGCACATTGGTTTCCGCAAAA 60.135 42.857 0.00 0.00 0.00 2.44
3351 4003 1.526464 GCACATTGGTTTCCGCAAAAG 59.474 47.619 0.00 0.00 0.00 2.27
3352 4004 2.820330 CACATTGGTTTCCGCAAAAGT 58.180 42.857 0.00 0.00 0.00 2.66
3353 4005 2.794350 CACATTGGTTTCCGCAAAAGTC 59.206 45.455 0.00 0.00 0.00 3.01
3354 4006 2.428890 ACATTGGTTTCCGCAAAAGTCA 59.571 40.909 0.00 0.00 0.00 3.41
3355 4007 3.118956 ACATTGGTTTCCGCAAAAGTCAA 60.119 39.130 0.00 0.00 0.00 3.18
3356 4008 3.810310 TTGGTTTCCGCAAAAGTCAAT 57.190 38.095 0.00 0.00 0.00 2.57
3357 4009 3.363341 TGGTTTCCGCAAAAGTCAATC 57.637 42.857 0.00 0.00 0.00 2.67
3358 4010 2.955660 TGGTTTCCGCAAAAGTCAATCT 59.044 40.909 0.00 0.00 0.00 2.40
3359 4011 3.383185 TGGTTTCCGCAAAAGTCAATCTT 59.617 39.130 0.00 0.00 38.10 2.40
3360 4012 3.735746 GGTTTCCGCAAAAGTCAATCTTG 59.264 43.478 0.00 0.00 36.40 3.02
3361 4013 4.499019 GGTTTCCGCAAAAGTCAATCTTGA 60.499 41.667 0.00 0.00 36.40 3.02
3537 4189 8.687292 TCTTATACGCGATATATTATGGGAGT 57.313 34.615 15.93 0.00 0.00 3.85
3538 4190 9.783081 TCTTATACGCGATATATTATGGGAGTA 57.217 33.333 15.93 0.00 0.00 2.59
3541 4193 6.085555 ACGCGATATATTATGGGAGTATGG 57.914 41.667 15.93 0.00 0.00 2.74
3542 4194 5.010719 ACGCGATATATTATGGGAGTATGGG 59.989 44.000 15.93 0.00 0.00 4.00
3543 4195 5.243060 CGCGATATATTATGGGAGTATGGGA 59.757 44.000 0.00 0.00 0.00 4.37
3544 4196 6.456501 GCGATATATTATGGGAGTATGGGAC 58.543 44.000 0.00 0.00 0.00 4.46
3569 4221 3.639094 AGAGGGAGTAGTACATGCACATC 59.361 47.826 2.52 0.00 0.00 3.06
3579 4231 5.312895 AGTACATGCACATCCAAAAGTACA 58.687 37.500 0.00 0.00 34.58 2.90
3580 4232 4.503741 ACATGCACATCCAAAAGTACAC 57.496 40.909 0.00 0.00 0.00 2.90
3582 4234 5.312895 ACATGCACATCCAAAAGTACACTA 58.687 37.500 0.00 0.00 0.00 2.74
3586 4238 7.283625 TGCACATCCAAAAGTACACTATTTT 57.716 32.000 0.00 0.00 0.00 1.82
3589 4241 8.293867 GCACATCCAAAAGTACACTATTTTACA 58.706 33.333 0.00 0.00 0.00 2.41
3590 4242 9.607285 CACATCCAAAAGTACACTATTTTACAC 57.393 33.333 0.00 0.00 0.00 2.90
3591 4243 9.344772 ACATCCAAAAGTACACTATTTTACACA 57.655 29.630 0.00 0.00 0.00 3.72
3594 4246 9.398538 TCCAAAAGTACACTATTTTACACAAGT 57.601 29.630 0.00 0.00 0.00 3.16
3595 4247 9.445786 CCAAAAGTACACTATTTTACACAAGTG 57.554 33.333 0.00 0.00 43.90 3.16
3642 4294 9.778741 TCTTTTGATTAAATGAGTGAGTGTAGT 57.221 29.630 0.00 0.00 0.00 2.73
3662 4314 8.276325 GTGTAGTCAGATGTTTCTTTGTACAAG 58.724 37.037 8.56 3.78 0.00 3.16
3666 4318 7.012421 AGTCAGATGTTTCTTTGTACAAGTTCC 59.988 37.037 8.56 0.00 0.00 3.62
3669 4321 4.601084 TGTTTCTTTGTACAAGTTCCCCA 58.399 39.130 8.56 0.72 0.00 4.96
3677 4329 4.991776 TGTACAAGTTCCCCATGATCAAA 58.008 39.130 0.00 0.00 0.00 2.69
3678 4330 5.009631 TGTACAAGTTCCCCATGATCAAAG 58.990 41.667 0.00 0.00 0.00 2.77
3679 4331 4.118168 ACAAGTTCCCCATGATCAAAGT 57.882 40.909 0.00 0.00 0.00 2.66
3684 4336 5.892348 AGTTCCCCATGATCAAAGTAAGTT 58.108 37.500 0.00 0.00 0.00 2.66
3687 4339 4.044065 TCCCCATGATCAAAGTAAGTTGGT 59.956 41.667 0.00 0.00 0.00 3.67
3693 4345 8.335356 CCATGATCAAAGTAAGTTGGTAATACG 58.665 37.037 0.00 0.00 0.00 3.06
3697 4350 5.574055 TCAAAGTAAGTTGGTAATACGCTCG 59.426 40.000 0.00 0.00 0.00 5.03
3700 4353 5.338365 AGTAAGTTGGTAATACGCTCGAAG 58.662 41.667 0.00 0.00 0.00 3.79
3702 4355 4.445452 AGTTGGTAATACGCTCGAAGAA 57.555 40.909 0.00 0.00 34.09 2.52
3725 4378 8.507249 AGAAAAGTTGATAATAGCCATATTCGC 58.493 33.333 0.00 0.00 33.58 4.70
3726 4379 7.744087 AAAGTTGATAATAGCCATATTCGCA 57.256 32.000 0.00 0.00 33.58 5.10
3732 4385 8.969121 TGATAATAGCCATATTCGCATTTTTG 57.031 30.769 0.00 0.00 33.58 2.44
3733 4386 8.575589 TGATAATAGCCATATTCGCATTTTTGT 58.424 29.630 0.00 0.00 33.58 2.83
3782 4437 7.513856 TGGCTGCCATAGTTATTTATCTAACA 58.486 34.615 19.30 0.00 34.66 2.41
3827 4483 9.590451 CTTGACCACATTATGCATTATTTCTTT 57.410 29.630 3.54 0.00 0.00 2.52
3855 4511 8.150945 ACTTCATGTAGTATCACAATGGTATCC 58.849 37.037 2.74 0.00 30.84 2.59
3857 4513 6.787458 TCATGTAGTATCACAATGGTATCCCT 59.213 38.462 0.00 0.00 30.84 4.20
3860 4516 5.975988 AGTATCACAATGGTATCCCTGTT 57.024 39.130 0.00 0.00 0.00 3.16
3862 4518 3.364460 TCACAATGGTATCCCTGTTGG 57.636 47.619 0.00 0.00 33.82 3.77
3864 4520 1.341976 ACAATGGTATCCCTGTTGGCC 60.342 52.381 0.00 0.00 33.82 5.36
3871 4527 1.072266 ATCCCTGTTGGCCTGTTGTA 58.928 50.000 3.32 0.00 0.00 2.41
3886 4542 5.177327 GCCTGTTGTAACATTTTGTGATTGG 59.823 40.000 0.00 0.00 38.41 3.16
3887 4543 6.279882 CCTGTTGTAACATTTTGTGATTGGT 58.720 36.000 0.00 0.00 38.41 3.67
3888 4544 7.429633 CCTGTTGTAACATTTTGTGATTGGTA 58.570 34.615 0.00 0.00 38.41 3.25
3889 4545 8.087750 CCTGTTGTAACATTTTGTGATTGGTAT 58.912 33.333 0.00 0.00 38.41 2.73
3890 4546 9.128107 CTGTTGTAACATTTTGTGATTGGTATC 57.872 33.333 0.00 0.00 38.41 2.24
3891 4547 8.633561 TGTTGTAACATTTTGTGATTGGTATCA 58.366 29.630 0.00 0.00 34.67 2.15
3898 4554 7.118101 ACATTTTGTGATTGGTATCAAACATGC 59.882 33.333 1.68 0.00 42.23 4.06
3904 4560 3.431673 TGGTATCAAACATGCAGTCCA 57.568 42.857 0.00 0.00 0.00 4.02
3913 4569 8.978874 ATCAAACATGCAGTCCAATAGTTATA 57.021 30.769 0.00 0.00 0.00 0.98
3914 4570 8.978874 TCAAACATGCAGTCCAATAGTTATAT 57.021 30.769 0.00 0.00 0.00 0.86
3915 4571 9.407380 TCAAACATGCAGTCCAATAGTTATATT 57.593 29.630 0.00 0.00 31.51 1.28
3933 4589 9.578439 AGTTATATTGAAATTTCTTCTTGCTGC 57.422 29.630 18.64 0.00 0.00 5.25
3934 4590 9.357652 GTTATATTGAAATTTCTTCTTGCTGCA 57.642 29.630 18.64 0.00 0.00 4.41
3935 4591 9.577110 TTATATTGAAATTTCTTCTTGCTGCAG 57.423 29.630 18.64 10.11 0.00 4.41
3936 4592 3.645884 TGAAATTTCTTCTTGCTGCAGC 58.354 40.909 31.89 31.89 42.50 5.25
3962 4618 9.518906 CAATGCAGCAGTAATGATTTATGTAAA 57.481 29.630 0.00 0.00 0.00 2.01
4010 4673 7.499232 ACTTAGTACACATTCTTTCTTGTGCTT 59.501 33.333 0.00 0.00 45.59 3.91
4027 4690 6.524101 TGTGCTTCATGTAGTATCACAGTA 57.476 37.500 7.03 0.00 0.00 2.74
4028 4691 6.564328 TGTGCTTCATGTAGTATCACAGTAG 58.436 40.000 7.03 0.00 0.00 2.57
4029 4692 6.152831 TGTGCTTCATGTAGTATCACAGTAGT 59.847 38.462 7.03 0.00 0.00 2.73
4032 4716 8.914011 TGCTTCATGTAGTATCACAGTAGTAAT 58.086 33.333 1.02 0.00 0.00 1.89
4037 4721 7.356089 TGTAGTATCACAGTAGTAATTGGGG 57.644 40.000 0.00 0.00 0.00 4.96
4041 4725 5.772393 ATCACAGTAGTAATTGGGGTCAA 57.228 39.130 0.00 0.00 37.28 3.18
4048 4732 6.538742 CAGTAGTAATTGGGGTCAACATGTAG 59.461 42.308 0.00 0.00 35.48 2.74
4050 4734 5.887754 AGTAATTGGGGTCAACATGTAGTT 58.112 37.500 0.00 0.00 42.42 2.24
4099 4784 3.399330 TCCAGCATTAGGTAATAAGCGC 58.601 45.455 0.00 0.00 0.00 5.92
4120 4805 1.823041 GGCATCAGAGGAGCTTGCC 60.823 63.158 7.54 7.54 45.31 4.52
4154 4839 7.176865 GGGATAATAAAAGGCTAAATCCTGGAC 59.823 40.741 0.00 0.00 36.38 4.02
4211 4896 6.495181 TGGGCCTTTTTACTTGTCATTGATTA 59.505 34.615 4.53 0.00 0.00 1.75
4391 5076 1.679032 GGGATGTCTGGTGTAGTTGGC 60.679 57.143 0.00 0.00 0.00 4.52
4412 5097 6.591935 TGGCAAAGGGTAATACTTCTCATAG 58.408 40.000 0.00 0.00 0.00 2.23
4501 5186 5.425196 TCCTAATGGGTGTAACAACCTAC 57.575 43.478 4.11 0.00 42.67 3.18
4518 5203 4.104086 ACCTACAGGGAGATGACAAATGA 58.896 43.478 0.00 0.00 40.27 2.57
4537 5222 8.025445 ACAAATGAAGAGCAGTTCAAATATGAC 58.975 33.333 5.00 0.00 39.84 3.06
4538 5223 6.690194 ATGAAGAGCAGTTCAAATATGACC 57.310 37.500 5.00 0.00 39.84 4.02
4539 5224 4.943705 TGAAGAGCAGTTCAAATATGACCC 59.056 41.667 0.00 0.00 34.61 4.46
4540 5225 3.891049 AGAGCAGTTCAAATATGACCCC 58.109 45.455 0.00 0.00 34.61 4.95
4541 5226 2.952310 GAGCAGTTCAAATATGACCCCC 59.048 50.000 0.00 0.00 34.61 5.40
4864 5553 9.042008 CGTTTTATGTTGGTAGCATAATACTCT 57.958 33.333 0.00 0.00 37.96 3.24
4869 5558 5.009710 TGTTGGTAGCATAATACTCTCTCCG 59.990 44.000 0.00 0.00 0.00 4.63
5160 5878 4.645535 TGTTCTTGCACTTTATCAGAGCT 58.354 39.130 0.00 0.00 39.71 4.09
5250 5968 4.775780 TGTAACAGGTACTATGTCTTGGCT 59.224 41.667 0.00 0.00 36.02 4.75
5317 6035 5.249780 TGTGAAATTGCCCTTAGGTTCTA 57.750 39.130 0.00 0.00 34.57 2.10
5318 6036 5.253330 TGTGAAATTGCCCTTAGGTTCTAG 58.747 41.667 0.00 0.00 34.57 2.43
5414 6132 1.203300 TGGACTCAAGATGGAGGGTGA 60.203 52.381 0.00 0.00 39.27 4.02
5415 6133 1.484240 GGACTCAAGATGGAGGGTGAG 59.516 57.143 0.00 0.00 42.60 3.51
5420 6138 0.985490 AAGATGGAGGGTGAGGCCTC 60.985 60.000 26.78 26.78 37.43 4.70
5626 6346 3.570125 CCATGCATTGAGCTTCATCTCAT 59.430 43.478 0.00 0.00 45.94 2.90
5659 6387 8.205512 ACGTATAGAGAGTCTCATCTTGTCTTA 58.794 37.037 22.05 2.93 32.06 2.10
5733 6464 3.865745 GTCTATCTTGGTGTGATCGTTGG 59.134 47.826 0.00 0.00 0.00 3.77
5808 6540 6.318900 GGGTCAAGTTAGATCCAATAACCTTG 59.681 42.308 0.00 0.00 38.71 3.61
5809 6541 7.110155 GGTCAAGTTAGATCCAATAACCTTGA 58.890 38.462 0.00 0.00 34.34 3.02
5827 6559 7.814264 ACCTTGACCATATCAAATCTGATTC 57.186 36.000 2.92 0.00 46.80 2.52
5880 6612 7.461182 TGTGTATGGGTAGAAAGAAATTTGG 57.539 36.000 0.00 0.00 0.00 3.28
5934 6666 5.539582 TCCACGTAATAATGTTTCAGCAC 57.460 39.130 0.00 0.00 0.00 4.40
5989 6721 4.267349 TGCCTACTGTCTCCTGTTTTAC 57.733 45.455 0.00 0.00 0.00 2.01
6056 6789 3.242739 GCAAAACTGCGAAAGAGTCTTCA 60.243 43.478 5.70 0.00 0.00 3.02
6068 6801 0.905357 AGTCTTCAGTTCATCCGGGG 59.095 55.000 0.00 0.00 0.00 5.73
6111 6844 5.912396 TGCTTGTACTTTTGCGACTAAATTG 59.088 36.000 0.00 0.00 0.00 2.32
6119 6852 4.560136 TTGCGACTAAATTGTTGAAGCA 57.440 36.364 0.00 0.00 0.00 3.91
6138 6871 2.574399 GCGTGGAGTCTCCTGGTC 59.426 66.667 19.82 7.07 37.46 4.02
6167 6900 4.451150 GATCGGTCGCTGCCACCA 62.451 66.667 16.60 4.36 32.89 4.17
6199 6932 3.034635 TGTTATGTTTGTGGTTTGGCCT 58.965 40.909 3.32 0.00 38.35 5.19
6223 6956 4.012319 CAGTGCTTATGCTGCTGTTAAG 57.988 45.455 0.00 7.13 40.48 1.85
6231 6964 6.404074 GCTTATGCTGCTGTTAAGATTGTTCT 60.404 38.462 16.32 0.00 36.03 3.01
6232 6965 7.201644 GCTTATGCTGCTGTTAAGATTGTTCTA 60.202 37.037 16.32 0.00 36.03 2.10
6275 7010 5.543507 TGTGGGAGTTTGCATTTGTTTAT 57.456 34.783 0.00 0.00 0.00 1.40
6417 7157 6.624352 TGTAATGCTGGATCTATTTCAAGC 57.376 37.500 0.00 0.00 42.14 4.01
6419 7159 3.541996 TGCTGGATCTATTTCAAGCGA 57.458 42.857 0.00 0.00 44.32 4.93
6461 7201 7.081349 TGTTTTATGAATCGCTTTACCTTGTG 58.919 34.615 0.00 0.00 0.00 3.33
6463 7203 7.624360 TTTATGAATCGCTTTACCTTGTGAT 57.376 32.000 0.00 0.00 35.26 3.06
6520 7260 8.985694 CGTTGATATCGTTGTCATTTTAGAAAC 58.014 33.333 0.00 0.00 0.00 2.78
6539 7279 7.190920 AGAAACTTACTAAACATGTGACTGC 57.809 36.000 0.00 0.00 0.00 4.40
6557 7297 5.466728 TGACTGCTTTCAGACATGTTCTAAC 59.533 40.000 0.00 0.00 42.95 2.34
6594 7334 4.220693 TGCCATATCACAGCAGTAAGTT 57.779 40.909 0.00 0.00 31.65 2.66
6616 7356 7.182060 AGTTAATATTCAAACCATCACAGGGT 58.818 34.615 0.00 0.00 41.41 4.34
6675 7416 4.244425 TGAAGTACTCACAAGCAGTCTC 57.756 45.455 0.00 0.00 0.00 3.36
6680 7421 7.339466 TGAAGTACTCACAAGCAGTCTCATATA 59.661 37.037 0.00 0.00 0.00 0.86
6687 7428 8.032952 TCACAAGCAGTCTCATATAACAAAAG 57.967 34.615 0.00 0.00 0.00 2.27
6691 7432 9.499585 CAAGCAGTCTCATATAACAAAAGAATG 57.500 33.333 0.00 0.00 35.71 2.67
6693 7434 9.453572 AGCAGTCTCATATAACAAAAGAATGAA 57.546 29.630 2.68 0.00 34.84 2.57
6761 7502 8.306038 CAATTTGGTTTCAGAAAGTATGGATGA 58.694 33.333 0.00 0.00 0.00 2.92
6768 7509 9.358872 GTTTCAGAAAGTATGGATGAAATTTCC 57.641 33.333 15.48 1.58 40.72 3.13
6776 7517 5.824904 ATGGATGAAATTTCCGAACTGAG 57.175 39.130 15.48 0.00 35.94 3.35
6779 7520 5.181245 TGGATGAAATTTCCGAACTGAGTTC 59.819 40.000 15.12 15.12 38.97 3.01
6801 7542 0.108851 CGTATTTTTGCTGGTGCCCC 60.109 55.000 0.00 0.00 38.71 5.80
6812 7553 3.110139 GTGCCCCATGTATGCACG 58.890 61.111 13.48 0.00 44.95 5.34
6845 7586 4.882427 GGAAGGAAGTTTATACCCTGCTTC 59.118 45.833 7.99 7.99 35.81 3.86
6893 7637 7.885009 TCAGAGCATGATAAAATTGAATGGA 57.115 32.000 0.00 0.00 31.12 3.41
7048 8460 2.415090 GGTATAGTGAGCGACAACACGT 60.415 50.000 0.00 0.00 41.22 4.49
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 9.202273 GAGTCATCACAGGATAATAACAGAATC 57.798 37.037 0.00 0.00 30.87 2.52
66 67 1.361204 TCTTGGATGAGCTCCCACAA 58.639 50.000 12.15 11.95 44.23 3.33
91 263 5.048507 ACTTACCGAAGACTCAACTTGTTC 58.951 41.667 0.00 0.00 36.45 3.18
94 266 4.617959 TCACTTACCGAAGACTCAACTTG 58.382 43.478 0.00 0.00 36.45 3.16
107 279 1.586422 CCTGATGCCATCACTTACCG 58.414 55.000 2.53 0.00 35.06 4.02
108 280 1.312815 GCCTGATGCCATCACTTACC 58.687 55.000 2.53 0.00 35.06 2.85
133 305 2.021457 ACACTCCAACAAACTTTCCGG 58.979 47.619 0.00 0.00 0.00 5.14
197 370 1.595466 TTCCGCGCTTTGGTAGAAAA 58.405 45.000 5.56 0.00 0.00 2.29
198 371 1.595466 TTTCCGCGCTTTGGTAGAAA 58.405 45.000 5.56 0.00 0.00 2.52
204 377 0.248866 AACACTTTTCCGCGCTTTGG 60.249 50.000 5.56 0.00 0.00 3.28
210 383 1.196200 CAACCAAACACTTTTCCGCG 58.804 50.000 0.00 0.00 0.00 6.46
263 437 1.295792 ATAACAAGCGGCGTATGTGG 58.704 50.000 17.78 1.79 0.00 4.17
305 479 2.639327 GCCGAATTGCTTGTGGCCT 61.639 57.895 3.32 0.00 39.83 5.19
306 480 2.125952 GCCGAATTGCTTGTGGCC 60.126 61.111 0.00 0.00 39.83 5.36
312 486 0.539438 TCTTGGTGGCCGAATTGCTT 60.539 50.000 0.00 0.00 0.00 3.91
314 488 0.316841 TTTCTTGGTGGCCGAATTGC 59.683 50.000 0.00 0.00 0.00 3.56
320 494 1.605202 CCACAAATTTCTTGGTGGCCG 60.605 52.381 11.28 0.00 46.90 6.13
329 503 6.482973 CCACACTTTTTATGCCACAAATTTCT 59.517 34.615 0.00 0.00 0.00 2.52
330 504 6.657888 CCACACTTTTTATGCCACAAATTTC 58.342 36.000 0.00 0.00 0.00 2.17
334 508 3.118629 TGCCACACTTTTTATGCCACAAA 60.119 39.130 0.00 0.00 0.00 2.83
369 543 0.664166 CGTCAGGCATGTTTGGTTGC 60.664 55.000 0.00 0.00 38.14 4.17
382 556 1.557443 GAACAAGCGTCACCGTCAGG 61.557 60.000 0.00 0.00 45.13 3.86
388 562 2.650608 GACAATTGAACAAGCGTCACC 58.349 47.619 13.59 0.00 0.00 4.02
389 563 2.298300 CGACAATTGAACAAGCGTCAC 58.702 47.619 13.59 0.00 0.00 3.67
392 566 1.263217 GTCCGACAATTGAACAAGCGT 59.737 47.619 13.59 0.00 0.00 5.07
436 610 9.072294 CAAGATAATATTTTTCGCCGACTTTTT 57.928 29.630 0.00 0.00 0.00 1.94
437 611 7.220108 GCAAGATAATATTTTTCGCCGACTTTT 59.780 33.333 0.00 0.00 0.00 2.27
438 612 6.691388 GCAAGATAATATTTTTCGCCGACTTT 59.309 34.615 0.00 0.00 0.00 2.66
471 645 6.016777 ACGTCGTATACTAATTTACTGAGGGG 60.017 42.308 0.00 0.00 0.00 4.79
486 660 6.580963 TCAAGTCTCTAGAACGTCGTATAC 57.419 41.667 0.00 0.00 0.00 1.47
498 672 7.442656 TCCCTTTGTAAACTTCAAGTCTCTAG 58.557 38.462 0.00 0.00 0.00 2.43
500 674 6.248569 TCCCTTTGTAAACTTCAAGTCTCT 57.751 37.500 0.00 0.00 0.00 3.10
513 687 4.202111 GCTTCAAAAGTGCTCCCTTTGTAA 60.202 41.667 9.48 4.56 34.94 2.41
518 692 2.371658 AGCTTCAAAAGTGCTCCCTT 57.628 45.000 0.00 0.00 30.41 3.95
525 699 6.363577 TCTTGTGTAGAAGCTTCAAAAGTG 57.636 37.500 27.57 11.96 31.12 3.16
526 700 7.391148 TTTCTTGTGTAGAAGCTTCAAAAGT 57.609 32.000 27.57 9.68 43.52 2.66
537 711 3.977999 TCCCTCCCTTTTCTTGTGTAGAA 59.022 43.478 0.00 0.00 41.11 2.10
552 726 0.032217 TTGGCAATCCATTCCCTCCC 60.032 55.000 0.00 0.00 43.05 4.30
555 729 0.325577 GGGTTGGCAATCCATTCCCT 60.326 55.000 24.51 0.00 45.42 4.20
556 730 2.211375 GGGTTGGCAATCCATTCCC 58.789 57.895 24.51 14.69 44.01 3.97
558 732 3.493176 GCTATTGGGTTGGCAATCCATTC 60.493 47.826 31.49 16.82 43.05 2.67
568 743 1.453197 GGACCGGCTATTGGGTTGG 60.453 63.158 0.00 0.00 36.46 3.77
590 765 8.973835 TTCCGTAATTTCACATTATTTTGTCC 57.026 30.769 0.00 0.00 0.00 4.02
625 808 6.040616 TCGGGTCTAGGTCTCAAATTTAGATC 59.959 42.308 0.00 0.00 0.00 2.75
628 811 5.593010 CTCGGGTCTAGGTCTCAAATTTAG 58.407 45.833 0.00 0.00 0.00 1.85
638 821 1.067821 CAGATTGCTCGGGTCTAGGTC 59.932 57.143 0.00 0.00 0.00 3.85
643 826 2.185350 CGCAGATTGCTCGGGTCT 59.815 61.111 0.00 0.00 42.25 3.85
655 838 0.321919 AGAGCTGGATTTTGCGCAGA 60.322 50.000 11.31 2.14 0.00 4.26
659 842 3.686726 AGTTTAGAGAGCTGGATTTTGCG 59.313 43.478 0.00 0.00 0.00 4.85
660 843 6.743575 TTAGTTTAGAGAGCTGGATTTTGC 57.256 37.500 0.00 0.00 0.00 3.68
669 852 7.947282 AGATCGCTATTTTAGTTTAGAGAGCT 58.053 34.615 0.00 0.00 36.56 4.09
698 881 7.883217 TCCCTCTGTAAACTAATATAAGAGCG 58.117 38.462 0.00 0.00 0.00 5.03
699 882 8.862085 ACTCCCTCTGTAAACTAATATAAGAGC 58.138 37.037 0.00 0.00 0.00 4.09
706 889 9.401058 GTGTACTACTCCCTCTGTAAACTAATA 57.599 37.037 0.00 0.00 0.00 0.98
707 890 7.892241 TGTGTACTACTCCCTCTGTAAACTAAT 59.108 37.037 0.00 0.00 0.00 1.73
709 892 6.782986 TGTGTACTACTCCCTCTGTAAACTA 58.217 40.000 0.00 0.00 0.00 2.24
711 894 5.972107 TGTGTACTACTCCCTCTGTAAAC 57.028 43.478 0.00 0.00 0.00 2.01
712 895 6.309357 TCTTGTGTACTACTCCCTCTGTAAA 58.691 40.000 0.00 0.00 0.00 2.01
713 896 5.884322 TCTTGTGTACTACTCCCTCTGTAA 58.116 41.667 0.00 0.00 0.00 2.41
714 897 5.509832 TCTTGTGTACTACTCCCTCTGTA 57.490 43.478 0.00 0.00 0.00 2.74
715 898 4.383931 TCTTGTGTACTACTCCCTCTGT 57.616 45.455 0.00 0.00 0.00 3.41
716 899 5.923733 AATCTTGTGTACTACTCCCTCTG 57.076 43.478 0.00 0.00 0.00 3.35
717 900 6.936968 AAAATCTTGTGTACTACTCCCTCT 57.063 37.500 0.00 0.00 0.00 3.69
718 901 7.266400 CCTAAAATCTTGTGTACTACTCCCTC 58.734 42.308 0.00 0.00 0.00 4.30
719 902 6.156429 CCCTAAAATCTTGTGTACTACTCCCT 59.844 42.308 0.00 0.00 0.00 4.20
720 903 6.070366 ACCCTAAAATCTTGTGTACTACTCCC 60.070 42.308 0.00 0.00 0.00 4.30
721 904 6.944096 ACCCTAAAATCTTGTGTACTACTCC 58.056 40.000 0.00 0.00 0.00 3.85
766 949 3.245407 CCCCCTTCTCCTTCAGTCAAATT 60.245 47.826 0.00 0.00 0.00 1.82
781 964 1.916181 TCAGGTTCAGAATCCCCCTTC 59.084 52.381 0.00 0.00 0.00 3.46
797 1001 0.732880 CGCAAGTGTCTACCGTCAGG 60.733 60.000 0.00 0.00 45.13 3.86
798 1002 0.240145 TCGCAAGTGTCTACCGTCAG 59.760 55.000 0.00 0.00 39.48 3.51
799 1003 0.240145 CTCGCAAGTGTCTACCGTCA 59.760 55.000 0.00 0.00 39.48 4.35
800 1004 0.456312 CCTCGCAAGTGTCTACCGTC 60.456 60.000 0.00 0.00 39.48 4.79
801 1005 1.585006 CCTCGCAAGTGTCTACCGT 59.415 57.895 0.00 0.00 39.48 4.83
802 1006 1.805945 GCCTCGCAAGTGTCTACCG 60.806 63.158 0.00 0.00 39.48 4.02
803 1007 1.448013 GGCCTCGCAAGTGTCTACC 60.448 63.158 0.00 0.00 39.48 3.18
804 1008 1.805945 CGGCCTCGCAAGTGTCTAC 60.806 63.158 0.00 0.00 39.48 2.59
805 1009 2.571757 CGGCCTCGCAAGTGTCTA 59.428 61.111 0.00 0.00 39.48 2.59
806 1010 4.379243 CCGGCCTCGCAAGTGTCT 62.379 66.667 0.00 0.00 39.48 3.41
807 1011 4.373116 TCCGGCCTCGCAAGTGTC 62.373 66.667 0.00 0.00 39.48 3.67
830 1034 1.133458 CTGCTCTTTTTCTCGCCGC 59.867 57.895 0.00 0.00 0.00 6.53
832 1036 0.321653 TCCCTGCTCTTTTTCTCGCC 60.322 55.000 0.00 0.00 0.00 5.54
834 1038 2.751166 TCTCCCTGCTCTTTTTCTCG 57.249 50.000 0.00 0.00 0.00 4.04
836 1040 4.713792 TCTTTCTCCCTGCTCTTTTTCT 57.286 40.909 0.00 0.00 0.00 2.52
838 1042 7.558081 GGTATATTCTTTCTCCCTGCTCTTTTT 59.442 37.037 0.00 0.00 0.00 1.94
839 1043 7.057264 GGTATATTCTTTCTCCCTGCTCTTTT 58.943 38.462 0.00 0.00 0.00 2.27
846 1050 6.299922 GGGAAAGGTATATTCTTTCTCCCTG 58.700 44.000 20.80 0.00 45.49 4.45
871 1075 2.141448 GGAAGGGATCCGGGGAGAC 61.141 68.421 5.45 0.00 38.79 3.36
895 1099 0.990818 AGGAGAGGAGATTTGGGGGC 60.991 60.000 0.00 0.00 0.00 5.80
896 1100 1.135960 GAGGAGAGGAGATTTGGGGG 58.864 60.000 0.00 0.00 0.00 5.40
897 1101 2.046292 GAGAGGAGAGGAGATTTGGGG 58.954 57.143 0.00 0.00 0.00 4.96
899 1103 2.965147 GAGGAGAGGAGAGGAGATTTGG 59.035 54.545 0.00 0.00 0.00 3.28
900 1104 3.891366 GAGAGGAGAGGAGAGGAGATTTG 59.109 52.174 0.00 0.00 0.00 2.32
901 1105 3.117131 GGAGAGGAGAGGAGAGGAGATTT 60.117 52.174 0.00 0.00 0.00 2.17
902 1106 2.447047 GGAGAGGAGAGGAGAGGAGATT 59.553 54.545 0.00 0.00 0.00 2.40
904 1108 1.518367 GGAGAGGAGAGGAGAGGAGA 58.482 60.000 0.00 0.00 0.00 3.71
906 1110 1.990160 GCGGAGAGGAGAGGAGAGGA 61.990 65.000 0.00 0.00 0.00 3.71
909 1113 1.529796 GAGCGGAGAGGAGAGGAGA 59.470 63.158 0.00 0.00 0.00 3.71
910 1114 1.528309 GGAGCGGAGAGGAGAGGAG 60.528 68.421 0.00 0.00 0.00 3.69
911 1115 2.598467 GGAGCGGAGAGGAGAGGA 59.402 66.667 0.00 0.00 0.00 3.71
912 1116 2.520741 GGGAGCGGAGAGGAGAGG 60.521 72.222 0.00 0.00 0.00 3.69
913 1117 0.972983 TTTGGGAGCGGAGAGGAGAG 60.973 60.000 0.00 0.00 0.00 3.20
921 1125 1.684869 GGGATTTGATTTGGGAGCGGA 60.685 52.381 0.00 0.00 0.00 5.54
924 1128 1.123077 GGGGGATTTGATTTGGGAGC 58.877 55.000 0.00 0.00 0.00 4.70
930 1134 3.106827 GTGGTGATGGGGGATTTGATTT 58.893 45.455 0.00 0.00 0.00 2.17
950 1154 4.688302 GTGGGGGTAGGTGGGGGT 62.688 72.222 0.00 0.00 0.00 4.95
1235 1466 1.834822 CTAGAGGGGGAAGGCGAGG 60.835 68.421 0.00 0.00 0.00 4.63
1236 1467 1.834822 CCTAGAGGGGGAAGGCGAG 60.835 68.421 0.00 0.00 0.00 5.03
1237 1468 1.291459 TACCTAGAGGGGGAAGGCGA 61.291 60.000 0.00 0.00 40.27 5.54
1238 1469 0.828343 CTACCTAGAGGGGGAAGGCG 60.828 65.000 0.00 0.00 40.27 5.52
1239 1470 0.561680 TCTACCTAGAGGGGGAAGGC 59.438 60.000 0.00 0.00 40.27 4.35
1240 1471 2.687003 CTCTACCTAGAGGGGGAAGG 57.313 60.000 0.00 0.00 44.71 3.46
1249 1480 4.857130 TGTGCTTCTACCTCTACCTAGA 57.143 45.455 0.00 0.00 0.00 2.43
1250 1481 5.830991 AGATTGTGCTTCTACCTCTACCTAG 59.169 44.000 0.00 0.00 0.00 3.02
1251 1482 5.767670 AGATTGTGCTTCTACCTCTACCTA 58.232 41.667 0.00 0.00 0.00 3.08
1252 1483 4.615513 AGATTGTGCTTCTACCTCTACCT 58.384 43.478 0.00 0.00 0.00 3.08
1253 1484 5.346181 AAGATTGTGCTTCTACCTCTACC 57.654 43.478 0.00 0.00 0.00 3.18
1254 1485 5.813157 GGAAAGATTGTGCTTCTACCTCTAC 59.187 44.000 0.00 0.00 0.00 2.59
1255 1486 5.721960 AGGAAAGATTGTGCTTCTACCTCTA 59.278 40.000 0.00 0.00 29.84 2.43
1256 1487 4.534103 AGGAAAGATTGTGCTTCTACCTCT 59.466 41.667 0.00 0.00 29.84 3.69
1257 1488 4.837972 AGGAAAGATTGTGCTTCTACCTC 58.162 43.478 0.00 0.00 29.84 3.85
1258 1489 4.917906 AGGAAAGATTGTGCTTCTACCT 57.082 40.909 0.00 0.00 0.00 3.08
1259 1490 4.876679 GGTAGGAAAGATTGTGCTTCTACC 59.123 45.833 0.00 0.00 37.78 3.18
1260 1491 5.735766 AGGTAGGAAAGATTGTGCTTCTAC 58.264 41.667 0.00 0.00 30.41 2.59
1261 1492 6.173339 CAAGGTAGGAAAGATTGTGCTTCTA 58.827 40.000 0.00 0.00 0.00 2.10
1262 1493 4.917906 AGGTAGGAAAGATTGTGCTTCT 57.082 40.909 0.00 0.00 0.00 2.85
1263 1494 4.156739 CCAAGGTAGGAAAGATTGTGCTTC 59.843 45.833 0.00 0.00 0.00 3.86
1264 1495 4.082125 CCAAGGTAGGAAAGATTGTGCTT 58.918 43.478 0.00 0.00 0.00 3.91
1265 1496 3.074538 ACCAAGGTAGGAAAGATTGTGCT 59.925 43.478 0.00 0.00 0.00 4.40
1266 1497 3.421844 ACCAAGGTAGGAAAGATTGTGC 58.578 45.455 0.00 0.00 0.00 4.57
1267 1498 4.455877 GTGACCAAGGTAGGAAAGATTGTG 59.544 45.833 0.00 0.00 0.00 3.33
1268 1499 4.506802 GGTGACCAAGGTAGGAAAGATTGT 60.507 45.833 0.00 0.00 0.00 2.71
1269 1500 4.010349 GGTGACCAAGGTAGGAAAGATTG 58.990 47.826 0.00 0.00 0.00 2.67
1270 1501 3.307480 CGGTGACCAAGGTAGGAAAGATT 60.307 47.826 1.11 0.00 0.00 2.40
1271 1502 2.236395 CGGTGACCAAGGTAGGAAAGAT 59.764 50.000 1.11 0.00 0.00 2.40
1272 1503 1.621814 CGGTGACCAAGGTAGGAAAGA 59.378 52.381 1.11 0.00 0.00 2.52
1273 1504 1.944430 GCGGTGACCAAGGTAGGAAAG 60.944 57.143 1.11 0.00 0.00 2.62
1274 1505 0.035739 GCGGTGACCAAGGTAGGAAA 59.964 55.000 1.11 0.00 0.00 3.13
1275 1506 0.834687 AGCGGTGACCAAGGTAGGAA 60.835 55.000 1.11 0.00 0.00 3.36
1276 1507 1.229082 AGCGGTGACCAAGGTAGGA 60.229 57.895 1.11 0.00 0.00 2.94
1277 1508 1.218316 GAGCGGTGACCAAGGTAGG 59.782 63.158 1.11 0.00 0.00 3.18
1280 1511 1.066143 CATTAGAGCGGTGACCAAGGT 60.066 52.381 1.11 0.00 0.00 3.50
1285 1516 3.531538 TGATTTCATTAGAGCGGTGACC 58.468 45.455 0.00 0.00 0.00 4.02
1293 1524 6.054295 CCCTCTCCACTTGATTTCATTAGAG 58.946 44.000 0.00 0.00 0.00 2.43
1298 1529 4.934797 TTCCCTCTCCACTTGATTTCAT 57.065 40.909 0.00 0.00 0.00 2.57
1360 1703 3.056080 ACACCCTAGCCCATGATACAAT 58.944 45.455 0.00 0.00 0.00 2.71
1384 1727 1.016130 CGGCGCCCATCTCATATCAC 61.016 60.000 23.46 0.00 0.00 3.06
1385 1728 1.184970 TCGGCGCCCATCTCATATCA 61.185 55.000 23.46 0.00 0.00 2.15
1387 1730 0.107993 CATCGGCGCCCATCTCATAT 60.108 55.000 23.46 0.00 0.00 1.78
1390 1733 4.916293 GCATCGGCGCCCATCTCA 62.916 66.667 23.46 0.00 0.00 3.27
1417 1777 3.377172 CACGAGCTTAAATTAACAGGGGG 59.623 47.826 0.00 0.00 0.00 5.40
1436 1798 2.352915 GCGCCGAGAGAGATCACG 60.353 66.667 0.00 0.00 0.00 4.35
1592 2014 0.178873 TTACCCAAGCCTCCAGACCT 60.179 55.000 0.00 0.00 0.00 3.85
1612 2034 7.362401 TAGTATTCACTTTCGAGTACCAACTCC 60.362 40.741 0.18 0.00 41.40 3.85
1667 2089 4.454728 ACATCCCACACATGTTATTTGC 57.545 40.909 0.00 0.00 29.75 3.68
1689 2111 5.615925 AAGAAATTACTAGCACGGATCCT 57.384 39.130 10.75 0.00 0.00 3.24
2187 2744 1.000233 CCCATAGGGCCAGTTTGCA 60.000 57.895 6.18 0.00 35.35 4.08
2229 2786 1.796796 GAATGGCCAAGCAGACGAC 59.203 57.895 10.96 0.00 0.00 4.34
2359 2916 8.213679 AGATATGACAGGCAAGTACATTAACAT 58.786 33.333 0.00 0.00 0.00 2.71
2360 2917 7.564793 AGATATGACAGGCAAGTACATTAACA 58.435 34.615 0.00 0.00 0.00 2.41
2361 2918 8.438676 AAGATATGACAGGCAAGTACATTAAC 57.561 34.615 0.00 0.00 0.00 2.01
2365 2922 9.060347 CAATTAAGATATGACAGGCAAGTACAT 57.940 33.333 0.00 0.00 0.00 2.29
2366 2923 8.046708 ACAATTAAGATATGACAGGCAAGTACA 58.953 33.333 0.00 0.00 0.00 2.90
2367 2924 8.438676 ACAATTAAGATATGACAGGCAAGTAC 57.561 34.615 0.00 0.00 0.00 2.73
2391 2948 3.130869 TGCCAGCAACCATTATGATTGAC 59.869 43.478 3.03 0.00 0.00 3.18
2412 2969 5.902613 TTCAGAAGGCAGGACAATATTTG 57.097 39.130 0.00 0.00 0.00 2.32
2540 3099 8.571461 AGATGATAAGAAAAGCAACAAGATCA 57.429 30.769 0.00 0.00 0.00 2.92
2612 3171 8.299262 AGTTATTAGCGTAATATGCAAGTGAG 57.701 34.615 7.26 0.00 31.27 3.51
2630 3189 5.245584 ACAACGGGGAAGGAAAGTTATTA 57.754 39.130 0.00 0.00 0.00 0.98
2631 3190 4.108501 ACAACGGGGAAGGAAAGTTATT 57.891 40.909 0.00 0.00 0.00 1.40
2718 3289 9.934190 GTTAACCAAACAGTAAAATACGAAGAA 57.066 29.630 0.00 0.00 38.05 2.52
2719 3290 8.558700 GGTTAACCAAACAGTAAAATACGAAGA 58.441 33.333 20.12 0.00 40.08 2.87
2720 3291 8.344098 TGGTTAACCAAACAGTAAAATACGAAG 58.656 33.333 25.19 0.00 44.35 3.79
2721 3292 8.218338 TGGTTAACCAAACAGTAAAATACGAA 57.782 30.769 25.19 0.00 44.35 3.85
2722 3293 7.798596 TGGTTAACCAAACAGTAAAATACGA 57.201 32.000 25.19 0.00 44.35 3.43
2832 3409 6.092807 CCAAAACTAGAGTTCATGTCTAAGGC 59.907 42.308 0.00 0.00 37.25 4.35
3316 3968 6.003950 ACCAATGTGCACTATATTATGGGAC 58.996 40.000 19.41 0.00 0.00 4.46
3317 3969 6.199557 ACCAATGTGCACTATATTATGGGA 57.800 37.500 19.41 0.00 0.00 4.37
3318 3970 6.899393 AACCAATGTGCACTATATTATGGG 57.101 37.500 19.41 11.20 0.00 4.00
3319 3971 7.370383 GGAAACCAATGTGCACTATATTATGG 58.630 38.462 19.41 16.08 0.00 2.74
3320 3972 7.077605 CGGAAACCAATGTGCACTATATTATG 58.922 38.462 19.41 6.92 0.00 1.90
3321 3973 6.293955 GCGGAAACCAATGTGCACTATATTAT 60.294 38.462 19.41 0.00 0.00 1.28
3322 3974 5.008217 GCGGAAACCAATGTGCACTATATTA 59.992 40.000 19.41 0.00 0.00 0.98
3323 3975 4.202010 GCGGAAACCAATGTGCACTATATT 60.202 41.667 19.41 6.74 0.00 1.28
3324 3976 3.315191 GCGGAAACCAATGTGCACTATAT 59.685 43.478 19.41 0.00 0.00 0.86
3325 3977 2.680841 GCGGAAACCAATGTGCACTATA 59.319 45.455 19.41 0.00 0.00 1.31
3326 3978 1.472480 GCGGAAACCAATGTGCACTAT 59.528 47.619 19.41 7.17 0.00 2.12
3327 3979 0.878416 GCGGAAACCAATGTGCACTA 59.122 50.000 19.41 4.84 0.00 2.74
3328 3980 1.106351 TGCGGAAACCAATGTGCACT 61.106 50.000 19.41 0.15 0.00 4.40
3329 3981 0.249238 TTGCGGAAACCAATGTGCAC 60.249 50.000 10.75 10.75 31.16 4.57
3330 3982 0.461548 TTTGCGGAAACCAATGTGCA 59.538 45.000 0.00 0.00 0.00 4.57
3331 3983 1.526464 CTTTTGCGGAAACCAATGTGC 59.474 47.619 0.00 0.00 0.00 4.57
3332 3984 2.794350 GACTTTTGCGGAAACCAATGTG 59.206 45.455 0.00 0.00 0.00 3.21
3333 3985 2.428890 TGACTTTTGCGGAAACCAATGT 59.571 40.909 0.00 0.00 0.00 2.71
3334 3986 3.090952 TGACTTTTGCGGAAACCAATG 57.909 42.857 0.00 0.00 0.00 2.82
3335 3987 3.810310 TTGACTTTTGCGGAAACCAAT 57.190 38.095 0.00 0.00 0.00 3.16
3336 3988 3.383185 AGATTGACTTTTGCGGAAACCAA 59.617 39.130 0.00 7.47 0.00 3.67
3337 3989 2.955660 AGATTGACTTTTGCGGAAACCA 59.044 40.909 0.00 0.00 0.00 3.67
3338 3990 3.643159 AGATTGACTTTTGCGGAAACC 57.357 42.857 0.00 0.00 0.00 3.27
3339 3991 4.606961 TCAAGATTGACTTTTGCGGAAAC 58.393 39.130 0.00 0.00 36.61 2.78
3340 3992 4.909696 TCAAGATTGACTTTTGCGGAAA 57.090 36.364 0.00 0.00 36.61 3.13
3511 4163 9.298250 ACTCCCATAATATATCGCGTATAAGAT 57.702 33.333 5.77 3.60 0.00 2.40
3512 4164 8.687292 ACTCCCATAATATATCGCGTATAAGA 57.313 34.615 5.77 1.50 0.00 2.10
3515 4167 8.953313 CCATACTCCCATAATATATCGCGTATA 58.047 37.037 5.77 8.35 0.00 1.47
3516 4168 7.093902 CCCATACTCCCATAATATATCGCGTAT 60.094 40.741 5.77 6.23 0.00 3.06
3517 4169 6.208007 CCCATACTCCCATAATATATCGCGTA 59.792 42.308 5.77 0.00 0.00 4.42
3518 4170 5.010719 CCCATACTCCCATAATATATCGCGT 59.989 44.000 5.77 0.00 0.00 6.01
3519 4171 5.243060 TCCCATACTCCCATAATATATCGCG 59.757 44.000 0.00 0.00 0.00 5.87
3520 4172 6.041637 TGTCCCATACTCCCATAATATATCGC 59.958 42.308 0.00 0.00 0.00 4.58
3521 4173 7.505923 TCTGTCCCATACTCCCATAATATATCG 59.494 40.741 0.00 0.00 0.00 2.92
3522 4174 8.783660 TCTGTCCCATACTCCCATAATATATC 57.216 38.462 0.00 0.00 0.00 1.63
3523 4175 8.578376 TCTCTGTCCCATACTCCCATAATATAT 58.422 37.037 0.00 0.00 0.00 0.86
3524 4176 7.950803 TCTCTGTCCCATACTCCCATAATATA 58.049 38.462 0.00 0.00 0.00 0.86
3525 4177 6.815880 TCTCTGTCCCATACTCCCATAATAT 58.184 40.000 0.00 0.00 0.00 1.28
3526 4178 6.227624 TCTCTGTCCCATACTCCCATAATA 57.772 41.667 0.00 0.00 0.00 0.98
3527 4179 5.090139 CTCTCTGTCCCATACTCCCATAAT 58.910 45.833 0.00 0.00 0.00 1.28
3528 4180 4.483950 CTCTCTGTCCCATACTCCCATAA 58.516 47.826 0.00 0.00 0.00 1.90
3529 4181 3.181417 CCTCTCTGTCCCATACTCCCATA 60.181 52.174 0.00 0.00 0.00 2.74
3530 4182 2.427002 CCTCTCTGTCCCATACTCCCAT 60.427 54.545 0.00 0.00 0.00 4.00
3531 4183 1.062886 CCTCTCTGTCCCATACTCCCA 60.063 57.143 0.00 0.00 0.00 4.37
3532 4184 1.710816 CCTCTCTGTCCCATACTCCC 58.289 60.000 0.00 0.00 0.00 4.30
3533 4185 1.218196 TCCCTCTCTGTCCCATACTCC 59.782 57.143 0.00 0.00 0.00 3.85
3534 4186 2.091555 ACTCCCTCTCTGTCCCATACTC 60.092 54.545 0.00 0.00 0.00 2.59
3535 4187 1.933765 ACTCCCTCTCTGTCCCATACT 59.066 52.381 0.00 0.00 0.00 2.12
3536 4188 2.463047 ACTCCCTCTCTGTCCCATAC 57.537 55.000 0.00 0.00 0.00 2.39
3537 4189 3.132056 ACTACTCCCTCTCTGTCCCATA 58.868 50.000 0.00 0.00 0.00 2.74
3538 4190 1.933765 ACTACTCCCTCTCTGTCCCAT 59.066 52.381 0.00 0.00 0.00 4.00
3539 4191 1.383963 ACTACTCCCTCTCTGTCCCA 58.616 55.000 0.00 0.00 0.00 4.37
3540 4192 2.241685 TGTACTACTCCCTCTCTGTCCC 59.758 54.545 0.00 0.00 0.00 4.46
3541 4193 3.648507 TGTACTACTCCCTCTCTGTCC 57.351 52.381 0.00 0.00 0.00 4.02
3542 4194 3.316868 GCATGTACTACTCCCTCTCTGTC 59.683 52.174 0.00 0.00 0.00 3.51
3543 4195 3.292460 GCATGTACTACTCCCTCTCTGT 58.708 50.000 0.00 0.00 0.00 3.41
3544 4196 3.067461 GTGCATGTACTACTCCCTCTCTG 59.933 52.174 6.69 0.00 0.00 3.35
3545 4197 3.292460 GTGCATGTACTACTCCCTCTCT 58.708 50.000 6.69 0.00 0.00 3.10
3546 4198 3.024547 TGTGCATGTACTACTCCCTCTC 58.975 50.000 15.25 0.00 0.00 3.20
3547 4199 3.101643 TGTGCATGTACTACTCCCTCT 57.898 47.619 15.25 0.00 0.00 3.69
3548 4200 3.243907 GGATGTGCATGTACTACTCCCTC 60.244 52.174 15.25 1.42 0.00 4.30
3549 4201 2.700897 GGATGTGCATGTACTACTCCCT 59.299 50.000 15.25 0.00 0.00 4.20
3550 4202 2.434336 TGGATGTGCATGTACTACTCCC 59.566 50.000 15.25 8.98 0.00 4.30
3551 4203 3.819564 TGGATGTGCATGTACTACTCC 57.180 47.619 15.25 16.59 0.00 3.85
3552 4204 5.643777 ACTTTTGGATGTGCATGTACTACTC 59.356 40.000 15.25 8.87 0.00 2.59
3553 4205 5.560724 ACTTTTGGATGTGCATGTACTACT 58.439 37.500 15.25 0.00 0.00 2.57
3554 4206 5.880054 ACTTTTGGATGTGCATGTACTAC 57.120 39.130 15.25 8.60 0.00 2.73
3555 4207 6.370442 GTGTACTTTTGGATGTGCATGTACTA 59.630 38.462 15.25 2.28 32.07 1.82
3556 4208 5.181245 GTGTACTTTTGGATGTGCATGTACT 59.819 40.000 15.25 0.72 32.07 2.73
3569 4221 9.445786 CACTTGTGTAAAATAGTGTACTTTTGG 57.554 33.333 0.00 0.00 34.68 3.28
3586 4238 9.883142 TTGATGTATCACATATTCACTTGTGTA 57.117 29.630 0.46 0.00 39.27 2.90
3589 4241 9.617523 TGATTGATGTATCACATATTCACTTGT 57.382 29.630 0.00 0.00 39.27 3.16
3619 4271 9.208022 CTGACTACACTCACTCATTTAATCAAA 57.792 33.333 0.00 0.00 0.00 2.69
3620 4272 8.585018 TCTGACTACACTCACTCATTTAATCAA 58.415 33.333 0.00 0.00 0.00 2.57
3621 4273 8.122472 TCTGACTACACTCACTCATTTAATCA 57.878 34.615 0.00 0.00 0.00 2.57
3628 4280 5.991933 AACATCTGACTACACTCACTCAT 57.008 39.130 0.00 0.00 0.00 2.90
3629 4281 5.536538 AGAAACATCTGACTACACTCACTCA 59.463 40.000 0.00 0.00 0.00 3.41
3631 4283 6.412362 AAGAAACATCTGACTACACTCACT 57.588 37.500 0.00 0.00 0.00 3.41
3632 4284 6.480320 ACAAAGAAACATCTGACTACACTCAC 59.520 38.462 0.00 0.00 0.00 3.51
3633 4285 6.582636 ACAAAGAAACATCTGACTACACTCA 58.417 36.000 0.00 0.00 0.00 3.41
3634 4286 7.652105 TGTACAAAGAAACATCTGACTACACTC 59.348 37.037 0.00 0.00 0.00 3.51
3635 4287 7.497595 TGTACAAAGAAACATCTGACTACACT 58.502 34.615 0.00 0.00 0.00 3.55
3636 4288 7.709269 TGTACAAAGAAACATCTGACTACAC 57.291 36.000 0.00 0.00 0.00 2.90
3642 4294 6.262273 GGGAACTTGTACAAAGAAACATCTGA 59.738 38.462 10.03 0.00 0.00 3.27
3662 4314 5.105756 CCAACTTACTTTGATCATGGGGAAC 60.106 44.000 0.00 0.00 0.00 3.62
3666 4318 7.645058 ATTACCAACTTACTTTGATCATGGG 57.355 36.000 11.39 0.00 0.00 4.00
3669 4321 7.769044 AGCGTATTACCAACTTACTTTGATCAT 59.231 33.333 0.00 0.00 0.00 2.45
3677 4329 4.970662 TCGAGCGTATTACCAACTTACT 57.029 40.909 0.00 0.00 0.00 2.24
3678 4330 5.335127 TCTTCGAGCGTATTACCAACTTAC 58.665 41.667 0.00 0.00 0.00 2.34
3679 4331 5.565592 TCTTCGAGCGTATTACCAACTTA 57.434 39.130 0.00 0.00 0.00 2.24
3684 4336 4.813027 ACTTTTCTTCGAGCGTATTACCA 58.187 39.130 0.00 0.00 0.00 3.25
3687 4339 8.692110 TTATCAACTTTTCTTCGAGCGTATTA 57.308 30.769 0.00 0.00 0.00 0.98
3693 4345 6.037172 TGGCTATTATCAACTTTTCTTCGAGC 59.963 38.462 0.00 0.00 0.00 5.03
3700 4353 8.289618 TGCGAATATGGCTATTATCAACTTTTC 58.710 33.333 0.00 0.00 0.00 2.29
3702 4355 7.744087 TGCGAATATGGCTATTATCAACTTT 57.256 32.000 0.00 0.00 0.00 2.66
3724 4377 7.641020 CAGATCCAGAAAACAAAACAAAAATGC 59.359 33.333 0.00 0.00 0.00 3.56
3725 4378 8.667463 ACAGATCCAGAAAACAAAACAAAAATG 58.333 29.630 0.00 0.00 0.00 2.32
3726 4379 8.791327 ACAGATCCAGAAAACAAAACAAAAAT 57.209 26.923 0.00 0.00 0.00 1.82
3732 4385 4.507756 GCCAACAGATCCAGAAAACAAAAC 59.492 41.667 0.00 0.00 0.00 2.43
3733 4386 4.405358 AGCCAACAGATCCAGAAAACAAAA 59.595 37.500 0.00 0.00 0.00 2.44
3782 4437 9.699410 TGGTCAAGAAAATAAATGATGGACTAT 57.301 29.630 0.00 0.00 0.00 2.12
3829 4485 8.150945 GGATACCATTGTGATACTACATGAAGT 58.849 37.037 0.00 0.00 0.00 3.01
3830 4486 8.539770 GGATACCATTGTGATACTACATGAAG 57.460 38.462 0.00 0.00 0.00 3.02
3854 4510 0.958822 GTTACAACAGGCCAACAGGG 59.041 55.000 5.01 0.00 40.85 4.45
3855 4511 1.686355 TGTTACAACAGGCCAACAGG 58.314 50.000 5.01 0.00 34.30 4.00
3857 4513 4.081420 ACAAAATGTTACAACAGGCCAACA 60.081 37.500 5.01 5.95 43.04 3.33
3860 4516 3.701542 TCACAAAATGTTACAACAGGCCA 59.298 39.130 5.01 0.00 43.04 5.36
3862 4518 5.177327 CCAATCACAAAATGTTACAACAGGC 59.823 40.000 0.84 0.00 43.04 4.85
3864 4520 9.128107 GATACCAATCACAAAATGTTACAACAG 57.872 33.333 0.84 0.00 35.81 3.16
3871 4527 8.991026 CATGTTTGATACCAATCACAAAATGTT 58.009 29.630 0.00 0.00 41.87 2.71
3886 4542 6.683974 ACTATTGGACTGCATGTTTGATAC 57.316 37.500 0.00 0.00 0.00 2.24
3887 4543 8.978874 ATAACTATTGGACTGCATGTTTGATA 57.021 30.769 0.00 0.00 0.00 2.15
3888 4544 7.886629 ATAACTATTGGACTGCATGTTTGAT 57.113 32.000 0.00 0.00 0.00 2.57
3889 4545 8.978874 ATATAACTATTGGACTGCATGTTTGA 57.021 30.769 0.00 0.00 0.00 2.69
3890 4546 9.454585 CAATATAACTATTGGACTGCATGTTTG 57.545 33.333 0.00 0.00 40.30 2.93
3891 4547 9.407380 TCAATATAACTATTGGACTGCATGTTT 57.593 29.630 0.00 0.00 42.96 2.83
3913 4569 4.689345 GCTGCAGCAAGAAGAAATTTCAAT 59.311 37.500 33.36 8.46 41.59 2.57
3914 4570 4.053295 GCTGCAGCAAGAAGAAATTTCAA 58.947 39.130 33.36 0.00 41.59 2.69
3915 4571 3.645884 GCTGCAGCAAGAAGAAATTTCA 58.354 40.909 33.36 0.00 41.59 2.69
3933 4589 3.710326 ATCATTACTGCTGCATTGCTG 57.290 42.857 10.49 10.68 37.79 4.41
3934 4590 4.730949 AAATCATTACTGCTGCATTGCT 57.269 36.364 10.49 0.00 0.00 3.91
3935 4591 5.981315 ACATAAATCATTACTGCTGCATTGC 59.019 36.000 1.31 0.46 0.00 3.56
3936 4592 9.518906 TTTACATAAATCATTACTGCTGCATTG 57.481 29.630 1.31 0.00 0.00 2.82
4010 4673 8.638873 CCCAATTACTACTGTGATACTACATGA 58.361 37.037 0.00 0.00 0.00 3.07
4027 4690 5.514500 ACTACATGTTGACCCCAATTACT 57.486 39.130 14.37 0.00 34.39 2.24
4028 4691 6.584185 AAACTACATGTTGACCCCAATTAC 57.416 37.500 14.37 0.00 39.13 1.89
4029 4692 8.887264 ATTAAACTACATGTTGACCCCAATTA 57.113 30.769 14.37 0.21 39.13 1.40
4032 4716 7.463431 ACTATTAAACTACATGTTGACCCCAA 58.537 34.615 14.37 1.64 39.13 4.12
4034 4718 7.933215 AACTATTAAACTACATGTTGACCCC 57.067 36.000 14.37 0.00 39.13 4.95
4061 4745 4.279169 TGCTGGAACAAGAAGAATTTCAGG 59.721 41.667 0.00 0.00 38.70 3.86
4068 4752 4.985538 ACCTAATGCTGGAACAAGAAGAA 58.014 39.130 0.00 0.00 38.70 2.52
4079 4764 3.403038 AGCGCTTATTACCTAATGCTGG 58.597 45.455 2.64 0.00 32.64 4.85
4099 4784 1.380524 CAAGCTCCTCTGATGCCAAG 58.619 55.000 0.00 0.00 0.00 3.61
4120 4805 6.966534 AGCCTTTTATTATCCCAGTCATTG 57.033 37.500 0.00 0.00 0.00 2.82
4211 4896 7.506599 TCAATGCCATGTGATAATCAGGTAAAT 59.493 33.333 0.00 0.00 0.00 1.40
4219 4904 8.827177 AAATGAATCAATGCCATGTGATAATC 57.173 30.769 0.00 0.00 33.31 1.75
4501 5186 3.626670 GCTCTTCATTTGTCATCTCCCTG 59.373 47.826 0.00 0.00 0.00 4.45
4518 5203 4.273318 GGGGTCATATTTGAACTGCTCTT 58.727 43.478 1.08 0.00 39.66 2.85
4864 5553 3.581332 AGACACTTATTTTGGGACGGAGA 59.419 43.478 0.00 0.00 0.00 3.71
4869 5558 6.635030 AAGTTGAGACACTTATTTTGGGAC 57.365 37.500 0.00 0.00 35.10 4.46
4941 5655 5.014755 ACCCATTTAAGTTGTACTCCATCCA 59.985 40.000 0.00 0.00 0.00 3.41
4945 5659 6.469410 CAGTACCCATTTAAGTTGTACTCCA 58.531 40.000 6.96 0.00 39.92 3.86
5160 5878 2.354704 CCAGTCTCCTTCACGCCATTTA 60.355 50.000 0.00 0.00 0.00 1.40
5250 5968 5.495640 AGGCCACAAATTTGAACAAAAGAA 58.504 33.333 24.64 0.00 33.56 2.52
5317 6035 5.975988 TGCATTCTATAAAGGGGAAGACT 57.024 39.130 0.00 0.00 0.00 3.24
5318 6036 7.428826 CAAATGCATTCTATAAAGGGGAAGAC 58.571 38.462 13.38 0.00 0.00 3.01
5420 6138 4.389576 GAAACGTGGCTGCCAGCG 62.390 66.667 29.02 29.02 43.62 5.18
5425 6143 1.081840 GCTCTTGAAACGTGGCTGC 60.082 57.895 0.00 0.00 0.00 5.25
5434 6152 2.705658 TCTCCAAGTCCTGCTCTTGAAA 59.294 45.455 7.16 0.00 43.17 2.69
5574 6294 8.316946 TGTGATATTTTTGCCATTATGTTGGAA 58.683 29.630 0.18 0.00 39.25 3.53
5774 6505 6.789457 TGGATCTAACTTGACCCATAGATGAT 59.211 38.462 0.00 0.00 35.74 2.45
5827 6559 7.517417 GCACAGATTTCGGTTGAGTTAGATATG 60.517 40.741 0.00 0.00 0.00 1.78
5934 6666 7.093814 TGGTTAAAATGATGAAGACAGGATTGG 60.094 37.037 0.00 0.00 0.00 3.16
5989 6721 1.574428 CGGTCAAAACCAGCTTCCG 59.426 57.895 0.00 0.00 46.86 4.30
6111 6844 1.569479 GACTCCACGCCTGCTTCAAC 61.569 60.000 0.00 0.00 0.00 3.18
6119 6852 2.681778 CCAGGAGACTCCACGCCT 60.682 66.667 23.60 0.00 39.61 5.52
6167 6900 5.221422 CCACAAACATAACAACAATCCTGGT 60.221 40.000 0.00 0.00 0.00 4.00
6231 6964 9.599866 CCACAAACAATATTAGACTCTGACATA 57.400 33.333 0.00 0.00 0.00 2.29
6232 6965 7.554118 CCCACAAACAATATTAGACTCTGACAT 59.446 37.037 0.00 0.00 0.00 3.06
6275 7010 4.513442 ACATTTTATTCTAGTGCTCGGCA 58.487 39.130 0.00 0.00 35.60 5.69
6331 7070 3.312828 GTTGCACACTCACACACAAAAA 58.687 40.909 0.00 0.00 0.00 1.94
6343 7083 2.622942 ACCAATCAAATCGTTGCACACT 59.377 40.909 0.00 0.00 34.50 3.55
6417 7157 6.949578 AAACAATAAAATCCAGCATTGTCG 57.050 33.333 0.00 0.00 39.92 4.35
6419 7159 9.941325 TCATAAAACAATAAAATCCAGCATTGT 57.059 25.926 0.00 0.00 41.98 2.71
6453 7193 6.384015 ACAGGATTACAGATCATCACAAGGTA 59.616 38.462 0.00 0.00 0.00 3.08
6461 7201 4.811024 TGCGAAACAGGATTACAGATCATC 59.189 41.667 0.00 0.00 0.00 2.92
6463 7203 4.183865 CTGCGAAACAGGATTACAGATCA 58.816 43.478 0.00 0.00 43.19 2.92
6520 7260 7.171508 TCTGAAAGCAGTCACATGTTTAGTAAG 59.828 37.037 0.00 0.00 42.84 2.34
6524 7264 5.237127 TGTCTGAAAGCAGTCACATGTTTAG 59.763 40.000 0.00 0.00 42.84 1.85
6557 7297 7.592533 GTGATATGGCATGTTAGCTTTTATGTG 59.407 37.037 10.98 0.00 34.17 3.21
6565 7305 3.144506 GCTGTGATATGGCATGTTAGCT 58.855 45.455 10.98 0.00 34.17 3.32
6594 7334 9.349713 GATTACCCTGTGATGGTTTGAATATTA 57.650 33.333 0.00 0.00 37.31 0.98
6655 7396 4.244425 TGAGACTGCTTGTGAGTACTTC 57.756 45.455 0.00 0.00 0.00 3.01
6680 7421 9.419297 CAGACATGATGAATTCATTCTTTTGTT 57.581 29.630 21.57 0.00 42.62 2.83
6687 7428 8.218338 ACCTTACAGACATGATGAATTCATTC 57.782 34.615 21.57 14.69 42.62 2.67
6691 7432 7.500992 TCCTACCTTACAGACATGATGAATTC 58.499 38.462 0.00 0.00 0.00 2.17
6693 7434 7.448420 CATCCTACCTTACAGACATGATGAAT 58.552 38.462 0.00 0.00 31.12 2.57
6694 7435 6.686378 GCATCCTACCTTACAGACATGATGAA 60.686 42.308 0.00 0.00 31.12 2.57
6776 7517 3.223157 CACCAGCAAAAATACGTCGAAC 58.777 45.455 0.00 0.00 0.00 3.95
6779 7520 1.602191 GCACCAGCAAAAATACGTCG 58.398 50.000 0.00 0.00 41.58 5.12
6801 7542 1.468127 TGAAAGTGCCGTGCATACATG 59.532 47.619 1.90 0.00 41.91 3.21
6812 7553 2.278332 ACTTCCTTCCTGAAAGTGCC 57.722 50.000 0.00 0.00 32.69 5.01
6845 7586 9.098355 TGATATTTTTCTCATTCAGTAGTTCCG 57.902 33.333 0.00 0.00 0.00 4.30
6893 7637 4.474651 TGTGGTGGGATTCTGATAACATCT 59.525 41.667 0.00 0.00 0.00 2.90
7048 8460 1.685224 GGGAAGATGTGCCCACAGA 59.315 57.895 0.00 0.00 45.48 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.