Multiple sequence alignment - TraesCS2B01G041900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G041900 chr2B 100.000 5484 0 0 1563 7046 19066169 19071652 0.000000e+00 10128.0
1 TraesCS2B01G041900 chr2B 94.002 1834 84 9 2326 4142 18932851 18931027 0.000000e+00 2754.0
2 TraesCS2B01G041900 chr2B 100.000 1308 0 0 1 1308 19064607 19065914 0.000000e+00 2416.0
3 TraesCS2B01G041900 chr2B 93.760 1234 58 7 5270 6489 18925508 18924280 0.000000e+00 1834.0
4 TraesCS2B01G041900 chr2B 92.321 586 19 16 734 1308 18934300 18933730 0.000000e+00 809.0
5 TraesCS2B01G041900 chr2B 85.571 797 50 25 4498 5280 18930425 18929680 0.000000e+00 774.0
6 TraesCS2B01G041900 chr2B 89.976 409 31 6 3974 4372 18927659 18927251 2.910000e-143 520.0
7 TraesCS2B01G041900 chr2B 93.750 336 20 1 4735 5069 18925904 18925569 2.930000e-138 503.0
8 TraesCS2B01G041900 chr2B 89.817 383 20 6 4000 4372 18931094 18930721 2.300000e-129 473.0
9 TraesCS2B01G041900 chr2B 88.839 224 18 3 4498 4721 18926898 18926682 1.160000e-67 268.0
10 TraesCS2B01G041900 chr2B 85.581 215 21 5 5221 5435 18929691 18929487 4.280000e-52 217.0
11 TraesCS2B01G041900 chr2B 92.857 126 9 0 2175 2300 18933104 18932979 4.340000e-42 183.0
12 TraesCS2B01G041900 chr2B 88.811 143 12 4 4359 4499 18930608 18930468 9.400000e-39 172.0
13 TraesCS2B01G041900 chr2B 85.526 152 11 6 4359 4500 18927090 18926940 1.580000e-31 148.0
14 TraesCS2B01G041900 chr2B 82.524 103 13 3 3255 3357 10774612 10774515 1.260000e-12 86.1
15 TraesCS2B01G041900 chr2B 100.000 40 0 0 6475 6514 18924278 18924239 2.730000e-09 75.0
16 TraesCS2B01G041900 chr2B 100.000 29 0 0 5077 5105 18925629 18925601 4.000000e-03 54.7
17 TraesCS2B01G041900 chr2D 92.321 1771 100 15 2175 3915 12574822 12576586 0.000000e+00 2484.0
18 TraesCS2B01G041900 chr2D 87.500 1632 163 30 4498 6118 12577259 12578860 0.000000e+00 1845.0
19 TraesCS2B01G041900 chr2D 93.185 719 43 5 3 719 137596828 137597542 0.000000e+00 1051.0
20 TraesCS2B01G041900 chr2D 92.458 716 47 5 3 715 137634978 137635689 0.000000e+00 1016.0
21 TraesCS2B01G041900 chr2D 92.211 719 50 4 3 719 372990690 372991404 0.000000e+00 1013.0
22 TraesCS2B01G041900 chr2D 92.275 712 48 7 3 712 373130425 373131131 0.000000e+00 1003.0
23 TraesCS2B01G041900 chr2D 92.058 554 32 4 3958 4500 12576665 12577217 0.000000e+00 769.0
24 TraesCS2B01G041900 chr2D 83.088 272 11 14 1041 1308 12573894 12574134 1.540000e-51 215.0
25 TraesCS2B01G041900 chr2D 78.462 195 35 6 3950 4142 12576585 12576774 3.450000e-23 121.0
26 TraesCS2B01G041900 chr2D 100.000 29 0 0 5142 5170 12577922 12577894 4.000000e-03 54.7
27 TraesCS2B01G041900 chr2A 92.270 1423 66 12 2175 3585 13030541 13031931 0.000000e+00 1978.0
28 TraesCS2B01G041900 chr2A 87.844 1670 122 29 4498 6118 13035002 13036639 0.000000e+00 1884.0
29 TraesCS2B01G041900 chr2A 88.858 1077 90 18 4498 5570 13033203 13034253 0.000000e+00 1297.0
30 TraesCS2B01G041900 chr2A 91.532 555 33 6 3958 4500 13032609 13033161 0.000000e+00 752.0
31 TraesCS2B01G041900 chr2A 88.235 408 39 4 3974 4372 13034250 13034657 4.940000e-131 479.0
32 TraesCS2B01G041900 chr2A 86.979 384 29 7 933 1308 13029665 13030035 5.090000e-111 412.0
33 TraesCS2B01G041900 chr2A 88.393 336 28 8 3591 3915 13032195 13032530 1.840000e-105 394.0
34 TraesCS2B01G041900 chr2A 85.417 144 17 4 4353 4494 13034813 13034954 5.700000e-31 147.0
35 TraesCS2B01G041900 chr2A 83.688 141 7 3 3250 3385 536453 536582 1.240000e-22 119.0
36 TraesCS2B01G041900 chr6B 95.984 772 30 1 2702 3472 49615995 49615224 0.000000e+00 1253.0
37 TraesCS2B01G041900 chr6B 92.629 719 43 8 3 719 316988055 316988765 0.000000e+00 1026.0
38 TraesCS2B01G041900 chr6B 92.629 719 43 8 3 719 316994844 316995554 0.000000e+00 1026.0
39 TraesCS2B01G041900 chr6B 94.264 523 23 1 6524 7046 671096705 671097220 0.000000e+00 793.0
40 TraesCS2B01G041900 chr7D 92.222 720 49 5 3 719 459027332 459028047 0.000000e+00 1013.0
41 TraesCS2B01G041900 chr4D 92.201 718 45 9 3 715 449997633 449998344 0.000000e+00 1005.0
42 TraesCS2B01G041900 chr1D 92.050 717 50 5 3 717 299227301 299226590 0.000000e+00 1002.0
43 TraesCS2B01G041900 chr1D 75.025 1005 157 47 2410 3342 492367349 492366367 5.160000e-101 379.0
44 TraesCS2B01G041900 chr1D 84.375 96 12 3 3711 3803 493030209 493030114 2.710000e-14 91.6
45 TraesCS2B01G041900 chr5B 90.909 528 38 2 6522 7046 706491195 706491715 0.000000e+00 701.0
46 TraesCS2B01G041900 chr5B 83.043 230 34 4 5896 6123 589116599 589116825 3.330000e-48 204.0
47 TraesCS2B01G041900 chr7B 91.406 512 28 3 6534 7045 741669232 741669727 0.000000e+00 688.0
48 TraesCS2B01G041900 chr4B 90.838 513 31 3 6534 7046 638534762 638534266 0.000000e+00 673.0
49 TraesCS2B01G041900 chr6A 88.814 447 43 1 6534 6980 27175093 27175532 6.220000e-150 542.0
50 TraesCS2B01G041900 chr6A 95.775 71 3 0 6976 7046 27178184 27178254 1.610000e-21 115.0
51 TraesCS2B01G041900 chr7A 86.172 499 68 1 6540 7038 96095237 96095734 8.040000e-149 538.0
52 TraesCS2B01G041900 chr1B 76.406 907 132 53 2700 3589 684675297 684676138 1.410000e-111 414.0
53 TraesCS2B01G041900 chr5D 86.339 366 41 8 3115 3476 404498452 404498092 2.380000e-104 390.0
54 TraesCS2B01G041900 chr5D 80.675 326 56 5 3761 4082 404498092 404497770 5.460000e-61 246.0
55 TraesCS2B01G041900 chr5D 84.753 223 29 4 5903 6123 480702079 480702298 1.190000e-52 219.0
56 TraesCS2B01G041900 chr5A 80.556 108 14 5 3092 3196 581626462 581626359 7.580000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G041900 chr2B 19064607 19071652 7045 False 6272.000000 10128 100.0000 1 7046 2 chr2B.!!$F1 7045
1 TraesCS2B01G041900 chr2B 18924239 18934300 10061 True 627.478571 2754 91.4865 734 6514 14 chr2B.!!$R2 5780
2 TraesCS2B01G041900 chr2D 12573894 12578860 4966 False 1086.800000 2484 86.6858 1041 6118 5 chr2D.!!$F5 5077
3 TraesCS2B01G041900 chr2D 137596828 137597542 714 False 1051.000000 1051 93.1850 3 719 1 chr2D.!!$F1 716
4 TraesCS2B01G041900 chr2D 137634978 137635689 711 False 1016.000000 1016 92.4580 3 715 1 chr2D.!!$F2 712
5 TraesCS2B01G041900 chr2D 372990690 372991404 714 False 1013.000000 1013 92.2110 3 719 1 chr2D.!!$F3 716
6 TraesCS2B01G041900 chr2D 373130425 373131131 706 False 1003.000000 1003 92.2750 3 712 1 chr2D.!!$F4 709
7 TraesCS2B01G041900 chr2A 13029665 13036639 6974 False 917.875000 1978 88.6910 933 6118 8 chr2A.!!$F2 5185
8 TraesCS2B01G041900 chr6B 49615224 49615995 771 True 1253.000000 1253 95.9840 2702 3472 1 chr6B.!!$R1 770
9 TraesCS2B01G041900 chr6B 316988055 316988765 710 False 1026.000000 1026 92.6290 3 719 1 chr6B.!!$F1 716
10 TraesCS2B01G041900 chr6B 316994844 316995554 710 False 1026.000000 1026 92.6290 3 719 1 chr6B.!!$F2 716
11 TraesCS2B01G041900 chr6B 671096705 671097220 515 False 793.000000 793 94.2640 6524 7046 1 chr6B.!!$F3 522
12 TraesCS2B01G041900 chr7D 459027332 459028047 715 False 1013.000000 1013 92.2220 3 719 1 chr7D.!!$F1 716
13 TraesCS2B01G041900 chr4D 449997633 449998344 711 False 1005.000000 1005 92.2010 3 715 1 chr4D.!!$F1 712
14 TraesCS2B01G041900 chr1D 299226590 299227301 711 True 1002.000000 1002 92.0500 3 717 1 chr1D.!!$R1 714
15 TraesCS2B01G041900 chr1D 492366367 492367349 982 True 379.000000 379 75.0250 2410 3342 1 chr1D.!!$R2 932
16 TraesCS2B01G041900 chr5B 706491195 706491715 520 False 701.000000 701 90.9090 6522 7046 1 chr5B.!!$F2 524
17 TraesCS2B01G041900 chr6A 27175093 27178254 3161 False 328.500000 542 92.2945 6534 7046 2 chr6A.!!$F1 512
18 TraesCS2B01G041900 chr1B 684675297 684676138 841 False 414.000000 414 76.4060 2700 3589 1 chr1B.!!$F1 889
19 TraesCS2B01G041900 chr5D 404497770 404498452 682 True 318.000000 390 83.5070 3115 4082 2 chr5D.!!$R1 967

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
34 35 0.037232 CCAAGGACTTGACGACTCCC 60.037 60.0 13.35 0.00 42.93 4.30 F
870 879 0.038892 TTTCGTGCCACCGACTAGAC 60.039 55.0 0.00 0.00 36.42 2.59 F
1736 1794 0.102300 ATGATGATTCACGCGTCGGA 59.898 50.0 9.86 0.62 33.85 4.55 F
1739 1797 0.248661 ATGATTCACGCGTCGGAGAG 60.249 55.0 9.86 0.00 36.95 3.20 F
2418 2664 0.259938 ATGCCTCCATTTCCTCCCAC 59.740 55.0 0.00 0.00 0.00 4.61 F
3998 4601 0.240145 TGAACGGAGTGTCTGTAGCG 59.760 55.0 0.00 0.00 45.00 4.26 F
5100 6041 0.332972 AAAGGTCAATCCCCAGGAGC 59.667 55.0 0.00 0.00 34.05 4.70 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1715 1767 0.157475 CGACGCGTGAATCATCATCG 59.843 55.000 20.70 5.75 38.01 3.84 R
2307 2553 1.065126 GGGAAGGCACAAGAGCTACAT 60.065 52.381 0.00 0.00 34.17 2.29 R
2567 2824 1.251251 AATGTTCCTGAAGCTGGTGC 58.749 50.000 0.00 0.00 40.05 5.01 R
3691 4285 1.267806 CAGCACGAAAAGAGTGGCATT 59.732 47.619 0.00 0.00 39.80 3.56 R
4111 4858 0.110486 TTTCAGCTGGGACCTTCCAC 59.890 55.000 15.13 0.00 38.64 4.02 R
5464 10783 0.036388 ATGTTGAGAATCGCACGGGT 60.036 50.000 0.00 0.00 38.61 5.28 R
6398 11722 0.102300 AAACAAACCTGTTGCCGCTC 59.898 50.000 0.00 0.00 45.25 5.03 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 0.037232 CCAAGGACTTGACGACTCCC 60.037 60.000 13.35 0.00 42.93 4.30
102 103 1.457346 CTTAGCCACCCAAAGCTCTG 58.543 55.000 0.00 0.00 40.56 3.35
148 149 3.193479 AGTGCTCGATCTACACATTCACA 59.807 43.478 10.89 0.00 36.76 3.58
164 165 5.687285 ACATTCACAAAAGCGAAAGTTGATC 59.313 36.000 0.00 0.00 0.00 2.92
168 169 2.558359 CAAAAGCGAAAGTTGATCCCCT 59.442 45.455 0.00 0.00 0.00 4.79
219 220 2.830651 GAGGTTGGAGACTCCTAGGA 57.169 55.000 22.14 11.98 37.46 2.94
265 266 0.970427 ACCATTGTGATTTCCCCCGC 60.970 55.000 0.00 0.00 0.00 6.13
284 285 3.506810 CGCAAAGTTTGTGAAGGTTTGA 58.493 40.909 21.96 0.00 43.66 2.69
446 448 2.028112 CCTCCAAGGAAGTGAACATCGA 60.028 50.000 0.00 0.00 37.67 3.59
504 506 6.438425 CCCTAACCCTAACTTACTACTTGTGA 59.562 42.308 0.00 0.00 0.00 3.58
551 553 6.563422 TCATATCATTTTGTGCTTGCTTACC 58.437 36.000 0.00 0.00 0.00 2.85
631 634 5.105106 TGTTAGGCTCACTTTCATATTCCGA 60.105 40.000 0.00 0.00 0.00 4.55
634 637 6.174720 AGGCTCACTTTCATATTCCGAATA 57.825 37.500 3.29 3.29 0.00 1.75
635 638 6.773638 AGGCTCACTTTCATATTCCGAATAT 58.226 36.000 7.69 7.69 34.46 1.28
637 640 7.173907 AGGCTCACTTTCATATTCCGAATATTG 59.826 37.037 10.43 7.04 31.83 1.90
638 641 6.798959 GCTCACTTTCATATTCCGAATATTGC 59.201 38.462 10.43 3.48 31.83 3.56
640 643 6.998074 TCACTTTCATATTCCGAATATTGCCT 59.002 34.615 10.43 0.00 31.83 4.75
707 714 2.491825 CCCCTCTAGGTCCATCTCGATT 60.492 54.545 0.00 0.00 0.00 3.34
719 726 3.064545 CCATCTCGATTCTTTCAGTTGGC 59.935 47.826 0.00 0.00 0.00 4.52
720 727 3.401033 TCTCGATTCTTTCAGTTGGCA 57.599 42.857 0.00 0.00 0.00 4.92
721 728 3.067106 TCTCGATTCTTTCAGTTGGCAC 58.933 45.455 0.00 0.00 0.00 5.01
722 729 3.070018 CTCGATTCTTTCAGTTGGCACT 58.930 45.455 0.00 0.00 0.00 4.40
742 749 5.575218 GCACTGTAATAAATTTTGGTTCGGG 59.425 40.000 0.00 0.00 0.00 5.14
752 759 1.626686 TTGGTTCGGGTGATTGCAAT 58.373 45.000 12.83 12.83 0.00 3.56
755 762 2.752354 TGGTTCGGGTGATTGCAATAAG 59.248 45.455 12.97 2.55 0.00 1.73
766 773 3.302365 TTGCAATAAGGCTCTTGTTGC 57.698 42.857 27.02 27.02 43.71 4.17
783 792 4.488790 CAGAGGTTGGCACTGCTT 57.511 55.556 0.00 0.00 0.00 3.91
787 796 1.912371 GAGGTTGGCACTGCTTACGC 61.912 60.000 0.00 0.00 0.00 4.42
788 797 1.966451 GGTTGGCACTGCTTACGCT 60.966 57.895 0.00 0.00 36.97 5.07
790 799 2.616330 TTGGCACTGCTTACGCTGC 61.616 57.895 0.00 0.00 38.51 5.25
791 800 2.743928 GGCACTGCTTACGCTGCT 60.744 61.111 0.00 0.00 37.45 4.24
792 801 2.477845 GCACTGCTTACGCTGCTG 59.522 61.111 0.00 0.00 38.51 4.41
793 802 2.477845 CACTGCTTACGCTGCTGC 59.522 61.111 5.34 5.34 38.51 5.25
794 803 2.031012 ACTGCTTACGCTGCTGCA 59.969 55.556 16.29 0.88 38.51 4.41
797 806 1.009078 CTGCTTACGCTGCTGCAATA 58.991 50.000 16.29 4.52 39.64 1.90
798 807 1.004185 CTGCTTACGCTGCTGCAATAG 60.004 52.381 16.29 9.45 39.64 1.73
799 808 1.290203 GCTTACGCTGCTGCAATAGA 58.710 50.000 16.29 0.00 39.64 1.98
800 809 1.869767 GCTTACGCTGCTGCAATAGAT 59.130 47.619 16.29 0.00 39.64 1.98
801 810 2.289002 GCTTACGCTGCTGCAATAGATT 59.711 45.455 16.29 0.00 39.64 2.40
840 849 4.565652 GCTCCATCCAACGGTCCATATAAT 60.566 45.833 0.00 0.00 0.00 1.28
858 867 1.298859 ATCTCGGCTGGTTTTCGTGC 61.299 55.000 0.00 0.00 0.00 5.34
870 879 0.038892 TTTCGTGCCACCGACTAGAC 60.039 55.000 0.00 0.00 36.42 2.59
889 904 1.703438 CGAGTCAGCAGCATCAAGGC 61.703 60.000 0.00 0.00 0.00 4.35
904 921 1.210204 AAGGCTGCAATCCTCCCTCA 61.210 55.000 7.56 0.00 32.45 3.86
915 932 5.509498 CAATCCTCCCTCAGGTTCAAATTA 58.491 41.667 0.00 0.00 43.95 1.40
927 944 5.126061 CAGGTTCAAATTATCCTTCCTGGTG 59.874 44.000 0.00 0.00 37.94 4.17
928 945 4.142160 GGTTCAAATTATCCTTCCTGGTGC 60.142 45.833 0.00 0.00 37.07 5.01
929 946 4.591321 TCAAATTATCCTTCCTGGTGCT 57.409 40.909 0.00 0.00 37.07 4.40
930 947 4.526970 TCAAATTATCCTTCCTGGTGCTC 58.473 43.478 0.00 0.00 37.07 4.26
931 948 3.584733 AATTATCCTTCCTGGTGCTCC 57.415 47.619 0.00 0.00 37.07 4.70
1625 1655 2.483538 GCTGTTGCCACTGAATTGGTTT 60.484 45.455 0.00 0.00 39.09 3.27
1667 1698 5.614923 TTTTGTTCGTTCAGTTGAGTTCA 57.385 34.783 0.00 0.00 0.00 3.18
1668 1699 4.857871 TTGTTCGTTCAGTTGAGTTCAG 57.142 40.909 0.00 0.00 0.00 3.02
1669 1700 3.857052 TGTTCGTTCAGTTGAGTTCAGT 58.143 40.909 0.00 0.00 0.00 3.41
1670 1701 4.250464 TGTTCGTTCAGTTGAGTTCAGTT 58.750 39.130 0.00 0.00 0.00 3.16
1671 1702 4.328983 TGTTCGTTCAGTTGAGTTCAGTTC 59.671 41.667 0.00 0.00 0.00 3.01
1672 1703 3.113322 TCGTTCAGTTGAGTTCAGTTCG 58.887 45.455 0.00 0.00 0.00 3.95
1715 1767 1.037030 TTCCGATGAATTGGCTGGGC 61.037 55.000 0.00 0.00 0.00 5.36
1730 1788 1.159713 TGGGCGATGATGATTCACGC 61.160 55.000 10.02 10.02 44.38 5.34
1735 1793 0.504384 GATGATGATTCACGCGTCGG 59.496 55.000 9.86 0.00 33.85 4.79
1736 1794 0.102300 ATGATGATTCACGCGTCGGA 59.898 50.000 9.86 0.62 33.85 4.55
1739 1797 0.248661 ATGATTCACGCGTCGGAGAG 60.249 55.000 9.86 0.00 36.95 3.20
1759 1817 3.393800 AGTCAACAGTTCGAATCCACAG 58.606 45.455 0.00 0.00 0.00 3.66
1761 1819 2.367241 TCAACAGTTCGAATCCACAGGA 59.633 45.455 0.00 0.00 35.55 3.86
1763 1821 1.336887 ACAGTTCGAATCCACAGGACG 60.337 52.381 0.00 0.00 32.98 4.79
1764 1822 1.067846 CAGTTCGAATCCACAGGACGA 60.068 52.381 0.00 0.00 32.98 4.20
1765 1823 1.825474 AGTTCGAATCCACAGGACGAT 59.175 47.619 0.00 0.00 31.96 3.73
1766 1824 2.233922 AGTTCGAATCCACAGGACGATT 59.766 45.455 0.00 0.00 31.96 3.34
1785 1843 7.805071 GGACGATTGATTGATTGGTTGATTATC 59.195 37.037 0.00 0.00 0.00 1.75
1788 1850 7.806487 CGATTGATTGATTGGTTGATTATCTGG 59.194 37.037 0.00 0.00 0.00 3.86
1791 1853 8.365060 TGATTGATTGGTTGATTATCTGGTTT 57.635 30.769 0.00 0.00 0.00 3.27
1793 1855 6.528537 TGATTGGTTGATTATCTGGTTTGG 57.471 37.500 0.00 0.00 0.00 3.28
1795 1857 6.896860 TGATTGGTTGATTATCTGGTTTGGAT 59.103 34.615 0.00 0.00 0.00 3.41
1799 1861 6.122277 GGTTGATTATCTGGTTTGGATCTCA 58.878 40.000 0.00 0.00 0.00 3.27
1821 1883 3.370978 AGAATAATCGTTCGTGCAACCTG 59.629 43.478 0.00 0.00 33.36 4.00
1846 1916 9.859152 TGTCTATCTAGTATATATGCTGCAGAT 57.141 33.333 20.43 14.73 0.00 2.90
1859 1929 5.414789 TGCTGCAGATTAGTACTTACCAA 57.585 39.130 20.43 0.00 0.00 3.67
1860 1930 5.800296 TGCTGCAGATTAGTACTTACCAAA 58.200 37.500 20.43 0.00 0.00 3.28
1861 1931 5.642063 TGCTGCAGATTAGTACTTACCAAAC 59.358 40.000 20.43 0.00 0.00 2.93
1862 1932 5.875359 GCTGCAGATTAGTACTTACCAAACT 59.125 40.000 20.43 0.00 0.00 2.66
1865 1935 9.431887 CTGCAGATTAGTACTTACCAAACTAAA 57.568 33.333 8.42 0.00 38.72 1.85
1915 1986 3.259123 ACCTGTTGCCCAATCTTCATTTC 59.741 43.478 0.00 0.00 0.00 2.17
1979 2050 1.335324 GCATTGCGCCATCTTGGTATC 60.335 52.381 4.18 0.00 40.46 2.24
1983 2054 2.016318 TGCGCCATCTTGGTATCTTTG 58.984 47.619 4.18 0.00 40.46 2.77
1990 2061 5.567423 GCCATCTTGGTATCTTTGCTGTTTT 60.567 40.000 0.00 0.00 40.46 2.43
2016 2087 2.682856 ACGTGTGCTGAAAAATGAGTGT 59.317 40.909 0.00 0.00 0.00 3.55
2017 2088 3.242739 ACGTGTGCTGAAAAATGAGTGTC 60.243 43.478 0.00 0.00 0.00 3.67
2018 2089 3.002656 CGTGTGCTGAAAAATGAGTGTCT 59.997 43.478 0.00 0.00 0.00 3.41
2019 2090 4.531332 GTGTGCTGAAAAATGAGTGTCTC 58.469 43.478 0.00 0.00 0.00 3.36
2040 2121 7.342026 TGTCTCAGGTAGTTTATCTGCATTCTA 59.658 37.037 0.00 0.00 36.84 2.10
2042 2123 7.342026 TCTCAGGTAGTTTATCTGCATTCTACA 59.658 37.037 0.00 0.00 36.84 2.74
2051 2132 8.830580 GTTTATCTGCATTCTACATTGCTTCTA 58.169 33.333 0.00 0.00 39.60 2.10
2054 2135 4.842574 TGCATTCTACATTGCTTCTACCA 58.157 39.130 0.00 0.00 39.60 3.25
2055 2136 4.635765 TGCATTCTACATTGCTTCTACCAC 59.364 41.667 0.00 0.00 39.60 4.16
2059 2140 5.073311 TCTACATTGCTTCTACCACACTC 57.927 43.478 0.00 0.00 0.00 3.51
2068 2149 4.383118 GCTTCTACCACACTCACACCATAT 60.383 45.833 0.00 0.00 0.00 1.78
2069 2150 5.163447 GCTTCTACCACACTCACACCATATA 60.163 44.000 0.00 0.00 0.00 0.86
2070 2151 5.847111 TCTACCACACTCACACCATATAC 57.153 43.478 0.00 0.00 0.00 1.47
2098 2179 1.019278 AAGCGGTCCGTTGTATGCAG 61.019 55.000 13.94 0.00 0.00 4.41
2104 2185 1.661112 GTCCGTTGTATGCAGCTTCTC 59.339 52.381 0.00 0.00 0.00 2.87
2126 2207 3.291809 TCGTCGTGAATAACTTCTGCA 57.708 42.857 0.00 0.00 32.29 4.41
2138 2232 9.234827 TGAATAACTTCTGCATTATCCATATGG 57.765 33.333 16.25 16.25 32.29 2.74
2173 2267 4.150451 GGTATTTCTGTTTGTTGCACATGC 59.850 41.667 0.00 0.00 42.50 4.06
2232 2363 7.676043 ACCTCCTTATTATAGATGCAGCTTCTA 59.324 37.037 11.02 17.90 0.00 2.10
2281 2412 4.997395 CACTAACAGCACCTGTGTTTCTAT 59.003 41.667 0.00 0.00 44.62 1.98
2284 2415 4.357918 ACAGCACCTGTGTTTCTATTCT 57.642 40.909 0.00 0.00 43.63 2.40
2353 2599 7.118680 CCAATTTTGACCTCCATTTTTCATCTG 59.881 37.037 0.00 0.00 0.00 2.90
2354 2600 5.726980 TTTGACCTCCATTTTTCATCTGG 57.273 39.130 0.00 0.00 0.00 3.86
2383 2629 1.760613 CAGGGATTTGGCTTGCATGAT 59.239 47.619 3.33 0.00 0.00 2.45
2418 2664 0.259938 ATGCCTCCATTTCCTCCCAC 59.740 55.000 0.00 0.00 0.00 4.61
2461 2707 4.673375 CCCCAGCAGCAGCAACCT 62.673 66.667 3.17 0.00 45.49 3.50
2470 2716 1.816835 CAGCAGCAACCTGTGATCATT 59.183 47.619 0.00 0.00 41.26 2.57
2552 2798 1.434696 CCCAAGCAATGCATCCGAC 59.565 57.895 8.35 0.00 0.00 4.79
2567 2824 3.127081 TCCGACTGATTTAACGTCTCG 57.873 47.619 0.00 0.00 0.00 4.04
2573 2830 2.333926 TGATTTAACGTCTCGCACCAG 58.666 47.619 0.00 0.00 0.00 4.00
2593 2850 5.221322 ACCAGCTTCAGGAACATTTTTCTTC 60.221 40.000 0.00 0.00 0.00 2.87
2637 2901 1.907807 TGGGCATGCAAACCAGACC 60.908 57.895 21.36 9.23 0.00 3.85
2984 3275 3.990469 TCTTCTTCTTCGACAACTGATGC 59.010 43.478 0.00 0.00 0.00 3.91
2985 3276 3.385193 TCTTCTTCGACAACTGATGCA 57.615 42.857 0.00 0.00 0.00 3.96
2986 3277 3.930336 TCTTCTTCGACAACTGATGCAT 58.070 40.909 0.00 0.00 0.00 3.96
3152 3476 8.720562 GCAAAGGCAACAAAGTTTGATATATTT 58.279 29.630 22.23 12.98 40.72 1.40
3483 3816 7.855904 GTGCACATAAGTAATTAATGTACCAGC 59.144 37.037 13.17 2.81 0.00 4.85
3587 3920 8.328758 TGTATCCAGATTCTTGAAATAACACCT 58.671 33.333 0.00 0.00 0.00 4.00
3607 4199 6.984474 ACACCTTGTATAATAATCCTGTCACG 59.016 38.462 0.00 0.00 0.00 4.35
3691 4285 4.019858 CTCAGTCCTGTCTATCAAGTGGA 58.980 47.826 0.00 0.00 0.00 4.02
3836 4439 1.810031 GCCGATGCTGCCAGTATGTTA 60.810 52.381 0.00 0.00 33.53 2.41
3904 4507 3.552273 GCCTCACTGTCTTTTCTGTCGTA 60.552 47.826 0.00 0.00 0.00 3.43
3915 4518 1.905637 TCTGTCGTAGCTGAAGGACA 58.094 50.000 10.67 10.67 40.80 4.02
3933 4536 3.265995 GGACAAGAACTTCTCCCCCAATA 59.734 47.826 0.00 0.00 0.00 1.90
3970 4573 1.693606 CCAAGTGGTGGCAAAAGGAAT 59.306 47.619 0.00 0.00 41.72 3.01
3998 4601 0.240145 TGAACGGAGTGTCTGTAGCG 59.760 55.000 0.00 0.00 45.00 4.26
4104 4851 1.848388 TGATCATCAACCAGGCTCCAT 59.152 47.619 0.00 0.00 0.00 3.41
4235 4991 5.519982 TGGAAGTCCCCATATGGAACAAATT 60.520 40.000 24.00 10.15 37.19 1.82
4274 5031 9.239002 CCGTAATATTCTAGTCTCAGTTTCTTG 57.761 37.037 0.00 0.00 0.00 3.02
4430 5312 6.018425 CGCTGTTATTTCAGTTCTATCAGCAT 60.018 38.462 12.47 0.00 43.61 3.79
4445 5327 7.857456 TCTATCAGCATGGTTTTCTTTACCTA 58.143 34.615 0.00 0.00 36.60 3.08
4465 5348 5.826737 ACCTAAATCTCATGAGCCAGATTTG 59.173 40.000 21.85 13.33 45.10 2.32
4686 5615 2.715046 CAGAGCTGGTTTAATGCTGGA 58.285 47.619 0.00 0.00 37.16 3.86
4693 5622 5.188359 AGCTGGTTTAATGCTGGAAATTCAT 59.812 36.000 0.00 0.00 35.54 2.57
4697 5626 8.537728 TGGTTTAATGCTGGAAATTCATATCT 57.462 30.769 0.00 0.00 0.00 1.98
4706 5635 8.533657 TGCTGGAAATTCATATCTTTGAAATGT 58.466 29.630 0.00 0.00 38.98 2.71
4743 5684 4.450757 GCTCCAAAACACTCTCTCTTTCTC 59.549 45.833 0.00 0.00 0.00 2.87
4780 5721 7.807977 ATTCATGACTTTTCAGTTGTACTGT 57.192 32.000 0.00 0.00 46.03 3.55
4861 5802 4.704057 AGATTTCTGGATTCTGACAAAGCC 59.296 41.667 0.00 0.00 35.23 4.35
5069 6010 3.012518 CCTGTGATACCTTGCTCCTTTG 58.987 50.000 0.00 0.00 0.00 2.77
5070 6011 3.560025 CCTGTGATACCTTGCTCCTTTGT 60.560 47.826 0.00 0.00 0.00 2.83
5071 6012 3.674997 TGTGATACCTTGCTCCTTTGTC 58.325 45.455 0.00 0.00 0.00 3.18
5072 6013 3.010420 GTGATACCTTGCTCCTTTGTCC 58.990 50.000 0.00 0.00 0.00 4.02
5073 6014 2.912956 TGATACCTTGCTCCTTTGTCCT 59.087 45.455 0.00 0.00 0.00 3.85
5079 6020 3.691609 CCTTGCTCCTTTGTCCTGTAATC 59.308 47.826 0.00 0.00 0.00 1.75
5083 6024 5.136828 TGCTCCTTTGTCCTGTAATCAAAA 58.863 37.500 0.00 0.00 32.06 2.44
5086 6027 5.701224 TCCTTTGTCCTGTAATCAAAAGGT 58.299 37.500 10.79 0.00 32.06 3.50
5087 6028 5.768164 TCCTTTGTCCTGTAATCAAAAGGTC 59.232 40.000 10.79 0.00 32.06 3.85
5089 6030 6.040391 CCTTTGTCCTGTAATCAAAAGGTCAA 59.960 38.462 0.00 0.00 37.35 3.18
5090 6031 7.255942 CCTTTGTCCTGTAATCAAAAGGTCAAT 60.256 37.037 0.00 0.00 38.39 2.57
5091 6032 6.817765 TGTCCTGTAATCAAAAGGTCAATC 57.182 37.500 0.00 0.00 32.59 2.67
5092 6033 5.710099 TGTCCTGTAATCAAAAGGTCAATCC 59.290 40.000 0.00 0.00 32.59 3.01
5093 6034 5.125578 GTCCTGTAATCAAAAGGTCAATCCC 59.874 44.000 0.00 0.00 36.75 3.85
5094 6035 4.402474 CCTGTAATCAAAAGGTCAATCCCC 59.598 45.833 0.00 0.00 36.75 4.81
5095 6036 5.004361 TGTAATCAAAAGGTCAATCCCCA 57.996 39.130 0.00 0.00 36.75 4.96
5096 6037 5.016173 TGTAATCAAAAGGTCAATCCCCAG 58.984 41.667 0.00 0.00 36.75 4.45
5097 6038 2.603075 TCAAAAGGTCAATCCCCAGG 57.397 50.000 0.00 0.00 36.75 4.45
5098 6039 2.069775 TCAAAAGGTCAATCCCCAGGA 58.930 47.619 0.00 0.00 36.75 3.86
5099 6040 2.041620 TCAAAAGGTCAATCCCCAGGAG 59.958 50.000 0.00 0.00 34.05 3.69
5100 6041 0.332972 AAAGGTCAATCCCCAGGAGC 59.667 55.000 0.00 0.00 34.05 4.70
5101 6042 1.575447 AAGGTCAATCCCCAGGAGCC 61.575 60.000 0.00 0.00 34.05 4.70
5102 6043 2.308722 GGTCAATCCCCAGGAGCCA 61.309 63.158 0.00 0.00 34.05 4.75
5141 6082 3.117813 TGTTGTTGGCTAGTTTGGGTACT 60.118 43.478 0.00 0.00 0.00 2.73
5142 6083 3.868619 TGTTGGCTAGTTTGGGTACTT 57.131 42.857 0.00 0.00 0.00 2.24
5143 6084 3.746940 TGTTGGCTAGTTTGGGTACTTC 58.253 45.455 0.00 0.00 0.00 3.01
5144 6085 3.079578 GTTGGCTAGTTTGGGTACTTCC 58.920 50.000 0.00 0.00 0.00 3.46
5147 6088 3.396611 TGGCTAGTTTGGGTACTTCCTTT 59.603 43.478 0.00 0.00 36.25 3.11
5149 6090 5.073417 TGGCTAGTTTGGGTACTTCCTTTAA 59.927 40.000 0.00 0.00 36.25 1.52
5150 6091 5.413833 GGCTAGTTTGGGTACTTCCTTTAAC 59.586 44.000 0.00 0.00 36.25 2.01
5151 6092 6.236409 GCTAGTTTGGGTACTTCCTTTAACT 58.764 40.000 0.00 0.00 36.20 2.24
5152 6093 6.148976 GCTAGTTTGGGTACTTCCTTTAACTG 59.851 42.308 0.00 0.00 35.02 3.16
5155 6096 6.320418 AGTTTGGGTACTTCCTTTAACTGTTG 59.680 38.462 2.69 0.00 33.48 3.33
5158 6099 6.424883 TGGGTACTTCCTTTAACTGTTGAAA 58.575 36.000 2.69 0.07 36.25 2.69
5159 6100 6.544564 TGGGTACTTCCTTTAACTGTTGAAAG 59.455 38.462 2.69 8.83 36.25 2.62
5160 6101 6.436261 GGTACTTCCTTTAACTGTTGAAAGC 58.564 40.000 2.69 0.00 32.37 3.51
5161 6102 6.038936 GGTACTTCCTTTAACTGTTGAAAGCA 59.961 38.462 2.69 0.00 32.37 3.91
5163 6104 6.507023 ACTTCCTTTAACTGTTGAAAGCATG 58.493 36.000 2.69 0.00 32.37 4.06
5164 6105 6.321181 ACTTCCTTTAACTGTTGAAAGCATGA 59.679 34.615 2.69 1.27 32.37 3.07
5168 6109 8.203485 TCCTTTAACTGTTGAAAGCATGAAAAT 58.797 29.630 2.69 0.00 32.37 1.82
5169 6110 8.490355 CCTTTAACTGTTGAAAGCATGAAAATC 58.510 33.333 2.69 0.00 32.37 2.17
5176 6117 5.886715 TGAAAGCATGAAAATCAAACACG 57.113 34.783 0.00 0.00 0.00 4.49
5214 6155 0.482446 AAGTTCAGGGCCAATGTCCA 59.518 50.000 6.18 0.00 39.40 4.02
5254 6195 5.300286 CCACTGAGTTCTGGTTCTGAAAAAT 59.700 40.000 0.00 0.00 0.00 1.82
5262 6203 2.223688 TGGTTCTGAAAAATGCACACCG 60.224 45.455 0.00 0.00 0.00 4.94
5455 10774 8.204160 TCATCGGTTCAGATAATGACAGTAAAT 58.796 33.333 0.00 0.00 37.77 1.40
5464 10783 7.495606 CAGATAATGACAGTAAATGGTGCACTA 59.504 37.037 17.98 11.97 0.00 2.74
5478 10797 2.959275 CACTACCCGTGCGATTCTC 58.041 57.895 0.00 0.00 36.72 2.87
5513 10832 6.072452 CCAGGTAGAGTTCATTCCTTTTTGTC 60.072 42.308 0.00 0.00 0.00 3.18
5527 10846 8.655651 TTCCTTTTTGTCCATGATTTTTGTAC 57.344 30.769 0.00 0.00 0.00 2.90
5681 11004 6.870439 CCAAAGAACCAAGAAATCCTCATTTC 59.130 38.462 0.01 0.01 45.91 2.17
5693 11016 5.750352 ATCCTCATTTCCAGCACAAAAAT 57.250 34.783 0.00 0.00 0.00 1.82
5694 11017 4.885413 TCCTCATTTCCAGCACAAAAATG 58.115 39.130 0.00 0.00 40.23 2.32
5697 11020 5.935789 CCTCATTTCCAGCACAAAAATGATT 59.064 36.000 13.43 0.00 44.18 2.57
5702 11025 9.384682 CATTTCCAGCACAAAAATGATTTAAAC 57.615 29.630 7.64 0.00 40.97 2.01
5778 11101 2.569134 GAAGTCGGCAGCGAGTCT 59.431 61.111 0.00 0.00 0.00 3.24
5786 11109 4.767255 CAGCGAGTCTGGCCCACC 62.767 72.222 0.00 0.00 39.15 4.61
5995 11319 1.663379 CGCGACCTGTGGATCACCTA 61.663 60.000 0.00 0.00 37.04 3.08
6043 11367 1.102978 GCCGGGCACACTGATAAAAT 58.897 50.000 15.62 0.00 0.00 1.82
6104 11428 4.028131 AGTATCGTTTCACCTATGACCCA 58.972 43.478 0.00 0.00 33.38 4.51
6181 11505 5.029807 TGTTTACACATGAGGAACTGACA 57.970 39.130 0.00 0.00 41.55 3.58
6279 11603 2.733956 TGATATCCCCACCTGCAAAAC 58.266 47.619 0.00 0.00 0.00 2.43
6280 11604 2.311542 TGATATCCCCACCTGCAAAACT 59.688 45.455 0.00 0.00 0.00 2.66
6292 11616 2.076100 TGCAAAACTCGATAGGTGCAG 58.924 47.619 9.20 0.00 35.48 4.41
6396 11720 8.998377 GCCAAACATACATTTTCTTTTGGTAAT 58.002 29.630 11.46 0.00 43.24 1.89
6401 11725 8.034804 ACATACATTTTCTTTTGGTAATGGAGC 58.965 33.333 0.00 0.00 33.41 4.70
6403 11727 4.513198 TTTTCTTTTGGTAATGGAGCGG 57.487 40.909 0.00 0.00 0.00 5.52
6404 11728 1.459450 TCTTTTGGTAATGGAGCGGC 58.541 50.000 0.00 0.00 0.00 6.53
6405 11729 1.173043 CTTTTGGTAATGGAGCGGCA 58.827 50.000 1.45 0.00 0.00 5.69
6406 11730 1.543802 CTTTTGGTAATGGAGCGGCAA 59.456 47.619 1.45 0.00 0.00 4.52
6407 11731 0.885196 TTTGGTAATGGAGCGGCAAC 59.115 50.000 1.45 0.00 0.00 4.17
6459 11794 3.896272 AGACCCTCCGACTTTATGGATAC 59.104 47.826 0.00 0.00 32.83 2.24
6514 11865 4.458989 GCACTTCTGATTATGACCACCAAA 59.541 41.667 0.00 0.00 0.00 3.28
6515 11866 5.392380 GCACTTCTGATTATGACCACCAAAG 60.392 44.000 0.00 0.00 0.00 2.77
6516 11867 5.124457 CACTTCTGATTATGACCACCAAAGG 59.876 44.000 0.00 0.00 0.00 3.11
6517 11868 4.927267 TCTGATTATGACCACCAAAGGT 57.073 40.909 0.00 0.00 46.82 3.50
6618 11969 1.925888 GGCCACCTCTGATCCCAAT 59.074 57.895 0.00 0.00 0.00 3.16
6619 11970 0.259938 GGCCACCTCTGATCCCAATT 59.740 55.000 0.00 0.00 0.00 2.32
6620 11971 1.685148 GCCACCTCTGATCCCAATTC 58.315 55.000 0.00 0.00 0.00 2.17
6621 11972 1.752084 GCCACCTCTGATCCCAATTCC 60.752 57.143 0.00 0.00 0.00 3.01
6622 11973 1.133668 CCACCTCTGATCCCAATTCCC 60.134 57.143 0.00 0.00 0.00 3.97
6623 11974 1.565759 CACCTCTGATCCCAATTCCCA 59.434 52.381 0.00 0.00 0.00 4.37
6624 11975 2.025037 CACCTCTGATCCCAATTCCCAA 60.025 50.000 0.00 0.00 0.00 4.12
6755 12106 1.315257 ACGCCATGGGTGCTGATTTC 61.315 55.000 15.13 0.00 36.54 2.17
6855 12206 0.673333 AATTGAGCGTGCCGTCATGA 60.673 50.000 0.00 0.00 0.00 3.07
6883 12234 1.226974 GCCTCATGCTTGCATGCTG 60.227 57.895 25.53 19.76 36.87 4.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
16 17 0.969894 AGGGAGTCGTCAAGTCCTTG 59.030 55.000 0.47 0.47 45.64 3.61
34 35 5.411053 GTCTGAAAATGGAGGTGAGAGAAAG 59.589 44.000 0.00 0.00 0.00 2.62
102 103 1.745653 CCTTCGCTTCCCAAAAGATCC 59.254 52.381 0.00 0.00 0.00 3.36
148 149 2.820197 GAGGGGATCAACTTTCGCTTTT 59.180 45.455 0.00 0.00 0.00 2.27
164 165 1.202521 GCACCACAAAAACAAGAGGGG 60.203 52.381 0.00 0.00 0.00 4.79
168 169 4.081752 ACAAGATGCACCACAAAAACAAGA 60.082 37.500 0.00 0.00 0.00 3.02
265 266 5.576774 GGTCTTCAAACCTTCACAAACTTTG 59.423 40.000 0.00 0.00 36.32 2.77
310 311 1.491563 CGAAGGCGTTTCTCAACCG 59.508 57.895 0.00 0.00 33.44 4.44
354 355 2.032681 GCCACGAAAGCTCACCCT 59.967 61.111 0.00 0.00 0.00 4.34
355 356 3.423154 CGCCACGAAAGCTCACCC 61.423 66.667 0.00 0.00 0.00 4.61
399 400 1.546961 ACGTCACTGTTAGAGAGGGG 58.453 55.000 0.00 0.00 0.00 4.79
400 401 2.097791 GCTACGTCACTGTTAGAGAGGG 59.902 54.545 0.00 0.00 0.00 4.30
446 448 2.158798 TCCGAGAGACGAGGATGTATGT 60.159 50.000 0.00 0.00 45.77 2.29
528 530 5.750067 GGGTAAGCAAGCACAAAATGATATG 59.250 40.000 0.00 0.00 0.00 1.78
719 726 6.584563 CACCCGAACCAAAATTTATTACAGTG 59.415 38.462 0.00 0.00 0.00 3.66
720 727 6.490721 TCACCCGAACCAAAATTTATTACAGT 59.509 34.615 0.00 0.00 0.00 3.55
721 728 6.915349 TCACCCGAACCAAAATTTATTACAG 58.085 36.000 0.00 0.00 0.00 2.74
722 729 6.896021 TCACCCGAACCAAAATTTATTACA 57.104 33.333 0.00 0.00 0.00 2.41
723 730 7.201487 GCAATCACCCGAACCAAAATTTATTAC 60.201 37.037 0.00 0.00 0.00 1.89
724 731 6.814146 GCAATCACCCGAACCAAAATTTATTA 59.186 34.615 0.00 0.00 0.00 0.98
725 732 5.641636 GCAATCACCCGAACCAAAATTTATT 59.358 36.000 0.00 0.00 0.00 1.40
726 733 5.175127 GCAATCACCCGAACCAAAATTTAT 58.825 37.500 0.00 0.00 0.00 1.40
727 734 4.039245 TGCAATCACCCGAACCAAAATTTA 59.961 37.500 0.00 0.00 0.00 1.40
728 735 3.181461 TGCAATCACCCGAACCAAAATTT 60.181 39.130 0.00 0.00 0.00 1.82
729 736 2.366916 TGCAATCACCCGAACCAAAATT 59.633 40.909 0.00 0.00 0.00 1.82
730 737 1.967066 TGCAATCACCCGAACCAAAAT 59.033 42.857 0.00 0.00 0.00 1.82
731 738 1.403814 TGCAATCACCCGAACCAAAA 58.596 45.000 0.00 0.00 0.00 2.44
732 739 1.403814 TTGCAATCACCCGAACCAAA 58.596 45.000 0.00 0.00 0.00 3.28
742 749 4.708726 ACAAGAGCCTTATTGCAATCAC 57.291 40.909 16.86 4.05 0.00 3.06
752 759 1.699634 ACCTCTGCAACAAGAGCCTTA 59.300 47.619 0.00 0.00 42.08 2.69
755 762 0.595095 CAACCTCTGCAACAAGAGCC 59.405 55.000 0.00 0.00 42.08 4.70
766 773 1.160137 GTAAGCAGTGCCAACCTCTG 58.840 55.000 12.58 0.00 37.94 3.35
783 792 2.158971 TCCAATCTATTGCAGCAGCGTA 60.159 45.455 0.00 0.00 46.23 4.42
787 796 1.600957 CCGTCCAATCTATTGCAGCAG 59.399 52.381 0.00 0.00 36.48 4.24
788 797 1.667236 CCGTCCAATCTATTGCAGCA 58.333 50.000 0.00 0.00 36.48 4.41
790 799 1.959042 AGCCGTCCAATCTATTGCAG 58.041 50.000 0.00 0.00 36.48 4.41
791 800 3.557054 GGATAGCCGTCCAATCTATTGCA 60.557 47.826 0.27 0.00 38.20 4.08
792 801 3.003480 GGATAGCCGTCCAATCTATTGC 58.997 50.000 0.27 0.00 38.20 3.56
793 802 4.271696 TGGATAGCCGTCCAATCTATTG 57.728 45.455 5.25 0.00 45.03 1.90
840 849 1.959226 GCACGAAAACCAGCCGAGA 60.959 57.895 0.00 0.00 0.00 4.04
870 879 1.703438 GCCTTGATGCTGCTGACTCG 61.703 60.000 0.00 0.00 0.00 4.18
889 904 0.622665 AACCTGAGGGAGGATTGCAG 59.377 55.000 2.38 0.00 46.33 4.41
895 910 4.166144 GGATAATTTGAACCTGAGGGAGGA 59.834 45.833 2.38 0.00 46.33 3.71
904 921 5.264395 CACCAGGAAGGATAATTTGAACCT 58.736 41.667 0.00 0.00 41.22 3.50
915 932 3.313874 CGGAGCACCAGGAAGGAT 58.686 61.111 0.00 0.00 41.22 3.24
1082 1106 4.576374 ACGGGGATAGGGGGAGGC 62.576 72.222 0.00 0.00 0.00 4.70
1596 1625 2.597217 TGGCAACAGCGGGGAAAG 60.597 61.111 0.00 0.00 46.17 2.62
1661 1692 2.795175 TCCACTGACGAACTGAACTC 57.205 50.000 0.00 0.00 0.00 3.01
1667 1698 3.870633 GGAGTTATCCACTGACGAACT 57.129 47.619 0.00 0.00 45.87 3.01
1715 1767 0.157475 CGACGCGTGAATCATCATCG 59.843 55.000 20.70 5.75 38.01 3.84
1730 1788 1.687628 GAACTGTTGACTCTCCGACG 58.312 55.000 0.00 0.00 0.00 5.12
1735 1793 3.675698 GTGGATTCGAACTGTTGACTCTC 59.324 47.826 0.00 0.00 0.00 3.20
1736 1794 3.069586 TGTGGATTCGAACTGTTGACTCT 59.930 43.478 0.00 0.00 0.00 3.24
1739 1797 2.480419 CCTGTGGATTCGAACTGTTGAC 59.520 50.000 0.00 0.00 0.00 3.18
1759 1817 4.963276 TCAACCAATCAATCAATCGTCC 57.037 40.909 0.00 0.00 0.00 4.79
1761 1819 8.347771 CAGATAATCAACCAATCAATCAATCGT 58.652 33.333 0.00 0.00 0.00 3.73
1763 1821 8.636213 ACCAGATAATCAACCAATCAATCAATC 58.364 33.333 0.00 0.00 0.00 2.67
1764 1822 8.543293 ACCAGATAATCAACCAATCAATCAAT 57.457 30.769 0.00 0.00 0.00 2.57
1765 1823 7.959658 ACCAGATAATCAACCAATCAATCAA 57.040 32.000 0.00 0.00 0.00 2.57
1766 1824 7.959658 AACCAGATAATCAACCAATCAATCA 57.040 32.000 0.00 0.00 0.00 2.57
1785 1843 6.051717 ACGATTATTCTGAGATCCAAACCAG 58.948 40.000 0.00 0.00 0.00 4.00
1788 1850 6.255887 ACGAACGATTATTCTGAGATCCAAAC 59.744 38.462 0.14 0.00 0.00 2.93
1791 1853 5.281727 CACGAACGATTATTCTGAGATCCA 58.718 41.667 0.14 0.00 0.00 3.41
1793 1855 4.740205 TGCACGAACGATTATTCTGAGATC 59.260 41.667 0.14 0.00 0.00 2.75
1795 1857 4.104696 TGCACGAACGATTATTCTGAGA 57.895 40.909 0.14 0.00 0.00 3.27
1799 1861 3.370978 CAGGTTGCACGAACGATTATTCT 59.629 43.478 0.14 0.00 35.12 2.40
1853 1923 8.294954 TGAACCAGTTTCATTTAGTTTGGTAA 57.705 30.769 0.00 0.00 39.45 2.85
1854 1924 7.013846 CCTGAACCAGTTTCATTTAGTTTGGTA 59.986 37.037 0.00 0.00 43.54 3.25
1856 1926 6.040391 TCCTGAACCAGTTTCATTTAGTTTGG 59.960 38.462 0.00 0.00 43.54 3.28
1857 1927 7.038154 TCCTGAACCAGTTTCATTTAGTTTG 57.962 36.000 0.00 0.00 43.54 2.93
1859 1929 6.434340 GGATCCTGAACCAGTTTCATTTAGTT 59.566 38.462 3.84 0.00 43.54 2.24
1860 1930 5.946377 GGATCCTGAACCAGTTTCATTTAGT 59.054 40.000 3.84 0.00 43.54 2.24
1861 1931 5.945784 TGGATCCTGAACCAGTTTCATTTAG 59.054 40.000 14.23 0.00 43.54 1.85
1862 1932 5.886609 TGGATCCTGAACCAGTTTCATTTA 58.113 37.500 14.23 0.00 43.54 1.40
1865 1935 4.043310 TCTTGGATCCTGAACCAGTTTCAT 59.957 41.667 14.23 0.00 43.54 2.57
1915 1986 1.125266 GACTGTTCGTTCGTTCGCG 59.875 57.895 0.00 0.00 42.98 5.87
2001 2072 3.817647 ACCTGAGACACTCATTTTTCAGC 59.182 43.478 1.92 0.00 39.92 4.26
2007 2078 8.037758 CAGATAAACTACCTGAGACACTCATTT 58.962 37.037 1.92 3.08 39.92 2.32
2008 2079 7.551585 CAGATAAACTACCTGAGACACTCATT 58.448 38.462 1.92 0.00 39.92 2.57
2010 2081 5.105716 GCAGATAAACTACCTGAGACACTCA 60.106 44.000 0.00 0.00 38.25 3.41
2012 2083 4.772624 TGCAGATAAACTACCTGAGACACT 59.227 41.667 0.00 0.00 0.00 3.55
2013 2084 5.073311 TGCAGATAAACTACCTGAGACAC 57.927 43.478 0.00 0.00 0.00 3.67
2016 2087 6.798427 AGAATGCAGATAAACTACCTGAGA 57.202 37.500 0.00 0.00 0.00 3.27
2017 2088 7.492524 TGTAGAATGCAGATAAACTACCTGAG 58.507 38.462 0.00 0.00 32.19 3.35
2018 2089 7.418337 TGTAGAATGCAGATAAACTACCTGA 57.582 36.000 0.00 0.00 32.19 3.86
2019 2090 8.554528 CAATGTAGAATGCAGATAAACTACCTG 58.445 37.037 0.00 0.00 31.11 4.00
2040 2121 3.181455 TGTGAGTGTGGTAGAAGCAATGT 60.181 43.478 0.00 0.00 0.00 2.71
2042 2123 3.403038 GTGTGAGTGTGGTAGAAGCAAT 58.597 45.455 0.00 0.00 0.00 3.56
2051 2132 6.808321 AATAGTATATGGTGTGAGTGTGGT 57.192 37.500 0.00 0.00 0.00 4.16
2059 2140 8.467598 ACCGCTTCTATAATAGTATATGGTGTG 58.532 37.037 0.00 0.00 0.00 3.82
2068 2149 5.532406 ACAACGGACCGCTTCTATAATAGTA 59.468 40.000 15.39 0.00 0.00 1.82
2069 2150 4.340381 ACAACGGACCGCTTCTATAATAGT 59.660 41.667 15.39 0.00 0.00 2.12
2070 2151 4.868067 ACAACGGACCGCTTCTATAATAG 58.132 43.478 15.39 0.00 0.00 1.73
2098 2179 4.167268 AGTTATTCACGACGAAGAGAAGC 58.833 43.478 0.00 0.00 36.95 3.86
2104 2185 3.673338 TGCAGAAGTTATTCACGACGAAG 59.327 43.478 0.00 0.00 36.95 3.79
2126 2207 5.771666 CACAACCTGAAGCCATATGGATAAT 59.228 40.000 26.47 4.68 37.39 1.28
2138 2232 3.821033 ACAGAAATACCACAACCTGAAGC 59.179 43.478 0.00 0.00 0.00 3.86
2173 2267 4.157289 AGAAGCAAGGCACAAATACAGATG 59.843 41.667 0.00 0.00 0.00 2.90
2232 2363 2.526304 TTAGCAGCAAGACAACGACT 57.474 45.000 0.00 0.00 0.00 4.18
2307 2553 1.065126 GGGAAGGCACAAGAGCTACAT 60.065 52.381 0.00 0.00 34.17 2.29
2353 2599 1.229177 AAATCCCTGGCCACCAACC 60.229 57.895 0.00 0.00 30.80 3.77
2354 2600 1.543944 CCAAATCCCTGGCCACCAAC 61.544 60.000 0.00 0.00 30.80 3.77
2383 2629 1.377366 GCATCCTCTCCGACGAGTCA 61.377 60.000 0.00 0.00 37.40 3.41
2418 2664 1.215014 TTGTGCACGAGACGCTGAAG 61.215 55.000 13.13 0.00 0.00 3.02
2461 2707 2.306805 AGTGCTTCTGGGAATGATCACA 59.693 45.455 0.00 0.00 36.35 3.58
2470 2716 1.553690 GCAGGGTAGTGCTTCTGGGA 61.554 60.000 0.00 0.00 40.54 4.37
2552 2798 2.333926 TGGTGCGAGACGTTAAATCAG 58.666 47.619 0.00 0.00 0.00 2.90
2567 2824 1.251251 AATGTTCCTGAAGCTGGTGC 58.749 50.000 0.00 0.00 40.05 5.01
2573 2830 6.419116 GTGAAGAAGAAAAATGTTCCTGAAGC 59.581 38.462 0.00 0.00 0.00 3.86
2593 2850 7.605691 AGACAATGAGATAAAACAGAGGTGAAG 59.394 37.037 0.00 0.00 0.00 3.02
2637 2901 3.331150 TCTACCATAAAAGCACACACCG 58.669 45.455 0.00 0.00 0.00 4.94
3152 3476 8.609176 GTCCTTTAATCTGCGATAACATGTTTA 58.391 33.333 17.78 3.36 0.00 2.01
3433 3766 3.053019 TGCCAACCATCAGGATAATTCCA 60.053 43.478 0.00 0.00 45.30 3.53
3483 3816 3.999663 GAGACAACAGAGAACTTGGGATG 59.000 47.826 0.00 0.00 0.00 3.51
3607 4199 6.036517 CACCTACTGAGAATGCTGAATGTTAC 59.963 42.308 0.00 0.00 0.00 2.50
3691 4285 1.267806 CAGCACGAAAAGAGTGGCATT 59.732 47.619 0.00 0.00 39.80 3.56
3819 4422 4.191544 TGAGTTAACATACTGGCAGCATC 58.808 43.478 15.89 0.00 0.00 3.91
3836 4439 5.899120 TTCAGCTAGTCGAGTAATGAGTT 57.101 39.130 12.26 0.00 0.00 3.01
3904 4507 3.244387 GGAGAAGTTCTTGTCCTTCAGCT 60.244 47.826 17.74 0.00 39.61 4.24
3915 4518 6.010850 GTCTTTTATTGGGGGAGAAGTTCTT 58.989 40.000 6.88 0.00 0.00 2.52
3933 4536 5.823045 CCACTTGGTTTCTCTGTAGTCTTTT 59.177 40.000 0.00 0.00 0.00 2.27
3959 4562 1.937191 TCAGGGGAATTCCTTTTGCC 58.063 50.000 23.63 15.50 36.44 4.52
3970 4573 0.613260 CACTCCGTTCATCAGGGGAA 59.387 55.000 0.00 0.00 0.00 3.97
3998 4601 7.492994 GTCTGGTTCATTGTAGGTCTTCTATTC 59.507 40.741 0.00 0.00 0.00 1.75
4104 4851 0.494551 TGGGACCTTCCACCTCCTAA 59.505 55.000 0.00 0.00 38.64 2.69
4111 4858 0.110486 TTTCAGCTGGGACCTTCCAC 59.890 55.000 15.13 0.00 38.64 4.02
4235 4991 1.606903 ATTACGGTTTTGTTGGCGGA 58.393 45.000 0.00 0.00 0.00 5.54
4329 5086 6.097439 TGTATCCCTATCAGAGCAGGATAT 57.903 41.667 7.88 2.86 40.67 1.63
4430 5312 9.231297 CTCATGAGATTTAGGTAAAGAAAACCA 57.769 33.333 18.34 0.00 39.64 3.67
4445 5327 4.643784 GGTCAAATCTGGCTCATGAGATTT 59.356 41.667 27.04 18.55 45.59 2.17
4465 5348 5.001232 TCTATGTGCAAAAACACCTAGGTC 58.999 41.667 12.84 0.00 39.93 3.85
4620 5548 7.615403 TCTTACCACAGGATTATGCAGATATC 58.385 38.462 0.00 0.00 0.00 1.63
4697 5626 9.190858 GAGCAATACAACATGTAACATTTCAAA 57.809 29.630 0.00 0.00 36.31 2.69
4706 5635 6.920758 GTGTTTTGGAGCAATACAACATGTAA 59.079 34.615 0.00 0.00 37.14 2.41
4806 5747 6.906659 ACATAATGAGCAAAACAGTGAAGAG 58.093 36.000 0.00 0.00 0.00 2.85
5069 6010 5.125578 GGGATTGACCTTTTGATTACAGGAC 59.874 44.000 0.00 0.00 38.98 3.85
5070 6011 5.261216 GGGATTGACCTTTTGATTACAGGA 58.739 41.667 0.00 0.00 38.98 3.86
5071 6012 4.402474 GGGGATTGACCTTTTGATTACAGG 59.598 45.833 0.00 0.00 38.98 4.00
5072 6013 5.016173 TGGGGATTGACCTTTTGATTACAG 58.984 41.667 0.00 0.00 38.98 2.74
5073 6014 5.004361 TGGGGATTGACCTTTTGATTACA 57.996 39.130 0.00 0.00 38.98 2.41
5079 6020 2.450476 CTCCTGGGGATTGACCTTTTG 58.550 52.381 0.00 0.00 38.98 2.44
5083 6024 2.003548 GGCTCCTGGGGATTGACCT 61.004 63.158 0.00 0.00 38.98 3.85
5086 6027 1.691219 GTTGGCTCCTGGGGATTGA 59.309 57.895 0.00 0.00 0.00 2.57
5087 6028 1.380380 GGTTGGCTCCTGGGGATTG 60.380 63.158 0.00 0.00 0.00 2.67
5089 6030 2.003548 GAGGTTGGCTCCTGGGGAT 61.004 63.158 0.00 0.00 38.02 3.85
5090 6031 2.610859 GAGGTTGGCTCCTGGGGA 60.611 66.667 0.00 0.00 38.02 4.81
5091 6032 4.101448 CGAGGTTGGCTCCTGGGG 62.101 72.222 6.55 0.00 38.02 4.96
5092 6033 3.003173 TCGAGGTTGGCTCCTGGG 61.003 66.667 6.55 0.12 38.02 4.45
5093 6034 2.581354 CTCGAGGTTGGCTCCTGG 59.419 66.667 3.91 5.89 38.02 4.45
5094 6035 2.125350 GCTCGAGGTTGGCTCCTG 60.125 66.667 15.58 1.07 38.02 3.86
5095 6036 1.768684 TTTGCTCGAGGTTGGCTCCT 61.769 55.000 15.58 1.77 40.97 3.69
5096 6037 1.302511 TTTGCTCGAGGTTGGCTCC 60.303 57.895 15.58 0.00 0.00 4.70
5097 6038 0.603975 AGTTTGCTCGAGGTTGGCTC 60.604 55.000 15.58 0.00 0.00 4.70
5098 6039 0.685097 TAGTTTGCTCGAGGTTGGCT 59.315 50.000 15.58 0.00 0.00 4.75
5099 6040 1.519408 TTAGTTTGCTCGAGGTTGGC 58.481 50.000 15.58 0.00 0.00 4.52
5100 6041 3.074412 ACATTAGTTTGCTCGAGGTTGG 58.926 45.455 15.58 0.00 0.00 3.77
5101 6042 4.024048 ACAACATTAGTTTGCTCGAGGTTG 60.024 41.667 15.58 17.07 38.00 3.77
5102 6043 4.134563 ACAACATTAGTTTGCTCGAGGTT 58.865 39.130 15.58 3.34 35.28 3.50
5141 6082 6.707440 TCATGCTTTCAACAGTTAAAGGAA 57.293 33.333 10.95 0.00 36.75 3.36
5142 6083 6.707440 TTCATGCTTTCAACAGTTAAAGGA 57.293 33.333 13.00 11.52 37.43 3.36
5143 6084 7.769272 TTTTCATGCTTTCAACAGTTAAAGG 57.231 32.000 13.00 0.00 34.07 3.11
5144 6085 9.033481 TGATTTTCATGCTTTCAACAGTTAAAG 57.967 29.630 9.29 9.29 36.09 1.85
5147 6088 8.816144 GTTTGATTTTCATGCTTTCAACAGTTA 58.184 29.630 0.00 0.00 0.00 2.24
5149 6090 6.817641 TGTTTGATTTTCATGCTTTCAACAGT 59.182 30.769 0.00 0.00 0.00 3.55
5150 6091 7.121272 GTGTTTGATTTTCATGCTTTCAACAG 58.879 34.615 0.00 0.00 0.00 3.16
5151 6092 6.237781 CGTGTTTGATTTTCATGCTTTCAACA 60.238 34.615 0.00 0.00 0.00 3.33
5152 6093 6.122125 CGTGTTTGATTTTCATGCTTTCAAC 58.878 36.000 0.00 0.00 0.00 3.18
5155 6096 5.231991 ACACGTGTTTGATTTTCATGCTTTC 59.768 36.000 17.22 0.00 0.00 2.62
5158 6099 4.305989 ACACGTGTTTGATTTTCATGCT 57.694 36.364 17.22 0.00 0.00 3.79
5159 6100 4.750121 CAACACGTGTTTGATTTTCATGC 58.250 39.130 30.49 0.00 35.83 4.06
5160 6101 4.267214 TGCAACACGTGTTTGATTTTCATG 59.733 37.500 30.49 17.02 35.83 3.07
5161 6102 4.428209 TGCAACACGTGTTTGATTTTCAT 58.572 34.783 30.49 3.57 35.83 2.57
5163 6104 4.831741 TTGCAACACGTGTTTGATTTTC 57.168 36.364 30.49 13.62 35.83 2.29
5164 6105 6.019961 CAGTATTGCAACACGTGTTTGATTTT 60.020 34.615 30.49 15.45 35.83 1.82
5168 6109 3.946402 CAGTATTGCAACACGTGTTTGA 58.054 40.909 30.49 18.88 35.83 2.69
5195 6136 0.482446 TGGACATTGGCCCTGAACTT 59.518 50.000 5.96 0.00 0.00 2.66
5214 6155 6.006449 ACTCAGTGGTATGCTTTTTCAAGAT 58.994 36.000 0.00 0.00 30.57 2.40
5464 10783 0.036388 ATGTTGAGAATCGCACGGGT 60.036 50.000 0.00 0.00 38.61 5.28
5469 10788 2.083774 GGTTCCATGTTGAGAATCGCA 58.916 47.619 0.00 0.00 38.61 5.10
5478 10797 3.703001 ACTCTACCTGGTTCCATGTTG 57.297 47.619 3.84 4.22 0.00 3.33
5513 10832 5.959527 CAGAATCGACGTACAAAAATCATGG 59.040 40.000 0.00 0.00 0.00 3.66
5527 10846 0.721718 GCAGGAAACCAGAATCGACG 59.278 55.000 0.00 0.00 0.00 5.12
5603 10926 5.736813 AGTAAGTGGTAAATGGTAATCGCA 58.263 37.500 0.00 0.00 0.00 5.10
5681 11004 6.761731 TCGTTTAAATCATTTTTGTGCTGG 57.238 33.333 0.00 0.00 0.00 4.85
5697 11020 9.887406 GGATGTGATTTACTTCTTTTCGTTTAA 57.113 29.630 0.00 0.00 34.71 1.52
5702 11025 7.118390 ACAGAGGATGTGATTTACTTCTTTTCG 59.882 37.037 0.00 0.00 41.91 3.46
5721 11044 7.480760 TGCAGCATATATACATAACAGAGGA 57.519 36.000 0.00 0.00 0.00 3.71
5801 11124 1.107114 GCTCGTCCTCATCTTCCTCA 58.893 55.000 0.00 0.00 0.00 3.86
6043 11367 1.606668 GCCAAAGTCGAACAACCATCA 59.393 47.619 0.00 0.00 0.00 3.07
6070 11394 6.017934 GGTGAAACGATACTATGTGCATTGAT 60.018 38.462 0.00 0.00 38.12 2.57
6104 11428 7.439955 TGAAACGATACTATGTTTGAGTTGTGT 59.560 33.333 0.00 0.00 38.35 3.72
6279 11603 1.284657 CTGTTGCTGCACCTATCGAG 58.715 55.000 0.00 0.00 0.00 4.04
6280 11604 0.608130 ACTGTTGCTGCACCTATCGA 59.392 50.000 0.00 0.00 0.00 3.59
6292 11616 3.878086 TCGACTTCATTGAACTGTTGC 57.122 42.857 0.00 0.00 0.00 4.17
6396 11720 2.192861 CAAACCTGTTGCCGCTCCA 61.193 57.895 0.00 0.00 0.00 3.86
6397 11721 1.734388 AACAAACCTGTTGCCGCTCC 61.734 55.000 0.00 0.00 44.28 4.70
6398 11722 0.102300 AAACAAACCTGTTGCCGCTC 59.898 50.000 0.00 0.00 45.25 5.03
6399 11723 0.534873 AAAACAAACCTGTTGCCGCT 59.465 45.000 0.00 0.00 45.25 5.52
6401 11725 1.061857 GCAAAAACAAACCTGTTGCCG 59.938 47.619 0.00 0.00 45.25 5.69
6403 11727 3.188254 AGTTGCAAAAACAAACCTGTTGC 59.812 39.130 0.00 0.00 45.25 4.17
6404 11728 5.355467 AAGTTGCAAAAACAAACCTGTTG 57.645 34.783 0.00 0.00 45.25 3.33
6406 11730 7.680442 AATTAAGTTGCAAAAACAAACCTGT 57.320 28.000 0.00 0.00 37.39 4.00
6407 11731 8.119845 GGTAATTAAGTTGCAAAAACAAACCTG 58.880 33.333 0.00 0.00 0.00 4.00
6514 11865 1.903877 CGTGAGCCATCCTTCCACCT 61.904 60.000 0.00 0.00 0.00 4.00
6515 11866 1.450312 CGTGAGCCATCCTTCCACC 60.450 63.158 0.00 0.00 0.00 4.61
6516 11867 4.208632 CGTGAGCCATCCTTCCAC 57.791 61.111 0.00 0.00 0.00 4.02
6618 11969 0.547712 AGGCTAGCTGGAGTTGGGAA 60.548 55.000 15.72 0.00 0.00 3.97
6619 11970 0.547712 AAGGCTAGCTGGAGTTGGGA 60.548 55.000 15.72 0.00 0.00 4.37
6620 11971 0.107459 GAAGGCTAGCTGGAGTTGGG 60.107 60.000 15.72 0.00 0.00 4.12
6621 11972 0.107459 GGAAGGCTAGCTGGAGTTGG 60.107 60.000 15.72 0.00 0.00 3.77
6622 11973 0.107459 GGGAAGGCTAGCTGGAGTTG 60.107 60.000 15.72 0.00 0.00 3.16
6623 11974 1.617947 CGGGAAGGCTAGCTGGAGTT 61.618 60.000 15.72 0.71 0.00 3.01
6624 11975 2.060980 CGGGAAGGCTAGCTGGAGT 61.061 63.158 15.72 0.00 0.00 3.85
6755 12106 2.009042 GCAGACCAAACCTGATCCTCG 61.009 57.143 0.00 0.00 33.65 4.63
6883 12234 2.677875 CCAGGCAACCTTGGAGGC 60.678 66.667 0.00 0.00 39.63 4.70


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.