Multiple sequence alignment - TraesCS2B01G038800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G038800 chr2B 100.000 6784 0 0 1 6784 17931889 17925106 0.000000e+00 12528.0
1 TraesCS2B01G038800 chr2B 86.220 2148 255 25 3675 5805 18012833 18010710 0.000000e+00 2289.0
2 TraesCS2B01G038800 chr2B 80.000 1495 215 45 359 1828 18128594 18127159 0.000000e+00 1027.0
3 TraesCS2B01G038800 chr2B 78.940 1529 255 50 3550 5030 17568974 17570483 0.000000e+00 977.0
4 TraesCS2B01G038800 chr2B 82.256 975 158 12 3468 4429 18072725 18071753 0.000000e+00 828.0
5 TraesCS2B01G038800 chr2B 82.155 863 146 4 998 1854 18114896 18114036 0.000000e+00 734.0
6 TraesCS2B01G038800 chr2B 82.409 847 130 13 999 1839 17698350 17699183 0.000000e+00 721.0
7 TraesCS2B01G038800 chr2B 90.414 459 36 6 6307 6764 18004847 18004396 1.260000e-166 597.0
8 TraesCS2B01G038800 chr2B 84.884 258 34 4 5822 6078 18005443 18005190 8.730000e-64 255.0
9 TraesCS2B01G038800 chr2D 86.862 2801 302 43 2972 5736 11553147 11550377 0.000000e+00 3073.0
10 TraesCS2B01G038800 chr2D 85.345 928 85 26 5844 6764 11550207 11549324 0.000000e+00 913.0
11 TraesCS2B01G038800 chr2D 82.272 1021 158 17 820 1828 11581266 11580257 0.000000e+00 861.0
12 TraesCS2B01G038800 chr2D 80.544 992 149 33 903 1867 11562917 11561943 0.000000e+00 723.0
13 TraesCS2B01G038800 chr2D 80.907 838 89 36 2125 2922 11553947 11553141 4.530000e-166 595.0
14 TraesCS2B01G038800 chr2D 79.712 833 145 19 928 1746 11613695 11612873 1.270000e-161 580.0
15 TraesCS2B01G038800 chr2D 83.830 470 49 10 359 823 11581770 11581323 8.130000e-114 422.0
16 TraesCS2B01G038800 chr2D 87.197 289 33 2 90 378 11591674 11591390 6.560000e-85 326.0
17 TraesCS2B01G038800 chr2D 83.060 366 47 8 1 360 11582418 11582062 1.100000e-82 318.0
18 TraesCS2B01G038800 chr2D 82.313 147 15 5 6433 6579 2262415 2262550 4.300000e-22 117.0
19 TraesCS2B01G038800 chr2D 95.745 47 2 0 342 388 11584805 11584759 7.300000e-10 76.8
20 TraesCS2B01G038800 chr2A 83.849 2390 315 49 3480 5833 12163659 12161305 0.000000e+00 2209.0
21 TraesCS2B01G038800 chr2A 84.615 2262 296 33 3555 5789 12181181 12178945 0.000000e+00 2202.0
22 TraesCS2B01G038800 chr2A 78.230 1571 274 46 3445 4968 12202111 12200562 0.000000e+00 944.0
23 TraesCS2B01G038800 chr2A 81.932 797 127 13 1008 1791 12209708 12208916 0.000000e+00 658.0
24 TraesCS2B01G038800 chr2A 79.133 992 169 30 961 1928 12171857 12170880 0.000000e+00 651.0
25 TraesCS2B01G038800 chr2A 89.946 368 29 7 6400 6765 12178600 12178239 1.030000e-127 468.0
26 TraesCS2B01G038800 chr2A 94.937 237 10 1 6529 6763 12159167 12158931 2.990000e-98 370.0
27 TraesCS2B01G038800 chr2A 85.455 110 15 1 3018 3126 644250533 644250424 5.560000e-21 113.0
28 TraesCS2B01G038800 chrUn 81.884 2749 374 71 3555 6248 2014002 2011323 0.000000e+00 2204.0
29 TraesCS2B01G038800 chrUn 76.865 1595 267 64 3480 5011 1981341 1979786 0.000000e+00 808.0
30 TraesCS2B01G038800 chrUn 81.720 837 131 12 1008 1836 1996863 1996041 0.000000e+00 678.0
31 TraesCS2B01G038800 chrUn 85.197 608 68 16 6166 6765 2011330 2010737 7.530000e-169 604.0
32 TraesCS2B01G038800 chrUn 84.091 88 8 5 6681 6765 331372344 331372260 5.640000e-11 80.5
33 TraesCS2B01G038800 chrUn 100.000 36 0 0 6538 6573 111116208 111116173 4.390000e-07 67.6
34 TraesCS2B01G038800 chr1A 76.829 1873 370 33 3675 5518 462393305 462395142 0.000000e+00 996.0
35 TraesCS2B01G038800 chr1B 80.884 837 144 11 1001 1829 486477519 486478347 0.000000e+00 645.0
36 TraesCS2B01G038800 chr1B 89.796 98 7 3 3020 3115 674067775 674067679 9.240000e-24 122.0
37 TraesCS2B01G038800 chr7A 80.188 853 146 18 997 1836 32022283 32021441 9.670000e-173 617.0
38 TraesCS2B01G038800 chr3B 88.785 107 11 1 3020 3126 824292025 824291920 5.520000e-26 130.0
39 TraesCS2B01G038800 chr3B 85.321 109 14 2 3020 3126 749488761 749488653 2.000000e-20 111.0
40 TraesCS2B01G038800 chr7D 84.091 132 18 2 3020 3148 635593140 635593009 2.570000e-24 124.0
41 TraesCS2B01G038800 chr7D 85.981 107 14 1 3020 3126 8592501 8592396 5.560000e-21 113.0
42 TraesCS2B01G038800 chr5B 87.619 105 9 3 3020 3123 608555876 608555977 1.200000e-22 119.0
43 TraesCS2B01G038800 chr7B 88.542 96 9 2 3018 3111 14978813 14978908 1.550000e-21 115.0
44 TraesCS2B01G038800 chr7B 100.000 36 0 0 6538 6573 465159142 465159107 4.390000e-07 67.6
45 TraesCS2B01G038800 chr6A 85.586 111 14 2 3020 3129 85575940 85576049 1.550000e-21 115.0
46 TraesCS2B01G038800 chr1D 100.000 36 0 0 6538 6573 37516259 37516224 4.390000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G038800 chr2B 17925106 17931889 6783 True 12528.00 12528 100.000000 1 6784 1 chr2B.!!$R1 6783
1 TraesCS2B01G038800 chr2B 18010710 18012833 2123 True 2289.00 2289 86.220000 3675 5805 1 chr2B.!!$R2 2130
2 TraesCS2B01G038800 chr2B 18127159 18128594 1435 True 1027.00 1027 80.000000 359 1828 1 chr2B.!!$R5 1469
3 TraesCS2B01G038800 chr2B 17568974 17570483 1509 False 977.00 977 78.940000 3550 5030 1 chr2B.!!$F1 1480
4 TraesCS2B01G038800 chr2B 18071753 18072725 972 True 828.00 828 82.256000 3468 4429 1 chr2B.!!$R3 961
5 TraesCS2B01G038800 chr2B 18114036 18114896 860 True 734.00 734 82.155000 998 1854 1 chr2B.!!$R4 856
6 TraesCS2B01G038800 chr2B 17698350 17699183 833 False 721.00 721 82.409000 999 1839 1 chr2B.!!$F2 840
7 TraesCS2B01G038800 chr2B 18004396 18005443 1047 True 426.00 597 87.649000 5822 6764 2 chr2B.!!$R6 942
8 TraesCS2B01G038800 chr2D 11549324 11553947 4623 True 1527.00 3073 84.371333 2125 6764 3 chr2D.!!$R4 4639
9 TraesCS2B01G038800 chr2D 11561943 11562917 974 True 723.00 723 80.544000 903 1867 1 chr2D.!!$R1 964
10 TraesCS2B01G038800 chr2D 11612873 11613695 822 True 580.00 580 79.712000 928 1746 1 chr2D.!!$R3 818
11 TraesCS2B01G038800 chr2D 11580257 11584805 4548 True 419.45 861 86.226750 1 1828 4 chr2D.!!$R5 1827
12 TraesCS2B01G038800 chr2A 12178239 12181181 2942 True 1335.00 2202 87.280500 3555 6765 2 chr2A.!!$R6 3210
13 TraesCS2B01G038800 chr2A 12158931 12163659 4728 True 1289.50 2209 89.393000 3480 6763 2 chr2A.!!$R5 3283
14 TraesCS2B01G038800 chr2A 12200562 12202111 1549 True 944.00 944 78.230000 3445 4968 1 chr2A.!!$R2 1523
15 TraesCS2B01G038800 chr2A 12208916 12209708 792 True 658.00 658 81.932000 1008 1791 1 chr2A.!!$R3 783
16 TraesCS2B01G038800 chr2A 12170880 12171857 977 True 651.00 651 79.133000 961 1928 1 chr2A.!!$R1 967
17 TraesCS2B01G038800 chrUn 2010737 2014002 3265 True 1404.00 2204 83.540500 3555 6765 2 chrUn.!!$R5 3210
18 TraesCS2B01G038800 chrUn 1979786 1981341 1555 True 808.00 808 76.865000 3480 5011 1 chrUn.!!$R1 1531
19 TraesCS2B01G038800 chrUn 1996041 1996863 822 True 678.00 678 81.720000 1008 1836 1 chrUn.!!$R2 828
20 TraesCS2B01G038800 chr1A 462393305 462395142 1837 False 996.00 996 76.829000 3675 5518 1 chr1A.!!$F1 1843
21 TraesCS2B01G038800 chr1B 486477519 486478347 828 False 645.00 645 80.884000 1001 1829 1 chr1B.!!$F1 828
22 TraesCS2B01G038800 chr7A 32021441 32022283 842 True 617.00 617 80.188000 997 1836 1 chr7A.!!$R1 839

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
187 2581 0.179086 CGGTTGCAAAACCAAAGCCT 60.179 50.0 0.00 0.00 42.97 4.58 F
806 3504 0.322008 GCTAAGCCTGCACTTGGAGT 60.322 55.0 4.83 0.00 30.20 3.85 F
1695 4460 0.313987 GGGCTTTTGTTTCTGTCGGG 59.686 55.0 0.00 0.00 0.00 5.14 F
2484 5270 0.179029 CGGTTCCCCATATGTCCACC 60.179 60.0 1.24 1.73 0.00 4.61 F
3045 5858 0.038251 CGCTCCAGTGCTTGTAGTCA 60.038 55.0 0.00 0.00 0.00 3.41 F
4077 6942 0.108520 TGGGCGTGGACTTATCGAAC 60.109 55.0 0.00 0.00 0.00 3.95 F
5319 8247 0.036732 CCAAGGGCTGCTACTTGTCA 59.963 55.0 24.67 0.00 41.84 3.58 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1399 4161 0.038892 CTTGCACGCCTTTCAGCAAT 60.039 50.000 0.00 0.0 44.85 3.56 R
1973 4747 0.396435 ACCGTCAAAGCTGGTCATCA 59.604 50.000 0.00 0.0 0.00 3.07 R
2957 5770 0.417841 AGGGGATCAGTGTGGTAGGT 59.582 55.000 0.00 0.0 0.00 3.08 R
4455 7338 1.333636 ATCTTCTGGAGGGACAGCCG 61.334 60.000 0.00 0.0 38.36 5.52 R
4970 7898 1.988107 TCCTCCAACTCCAAGCTCATT 59.012 47.619 0.00 0.0 0.00 2.57 R
5623 8569 0.529378 ACCTTGTACGGAGGCGTAAG 59.471 55.000 13.44 0.0 37.84 2.34 R
6344 10956 0.553819 ACACCAGGGGTTACAAAGCA 59.446 50.000 0.00 0.0 31.02 3.91 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 2423 3.463944 CATCACGATGGGTTTACCTACC 58.536 50.000 0.00 0.00 41.11 3.18
38 2426 0.531311 CGATGGGTTTACCTACCGCC 60.531 60.000 0.00 0.00 39.18 6.13
46 2434 0.662619 TTACCTACCGCCGTCGTATG 59.337 55.000 0.00 0.00 0.00 2.39
53 2441 1.701545 CCGCCGTCGTATGCAAATGT 61.702 55.000 0.00 0.00 0.00 2.71
54 2442 0.586256 CGCCGTCGTATGCAAATGTG 60.586 55.000 0.00 0.00 0.00 3.21
60 2448 2.666508 GTCGTATGCAAATGTGTCGTCT 59.333 45.455 0.00 0.00 0.00 4.18
75 2463 1.720694 CGTCTTGTTTGTTGGGCCGT 61.721 55.000 0.00 0.00 0.00 5.68
79 2467 0.394488 TTGTTTGTTGGGCCGTCAGA 60.394 50.000 0.00 0.00 0.00 3.27
91 2479 2.143925 GCCGTCAGACAAACTAAAGCT 58.856 47.619 0.41 0.00 0.00 3.74
93 2481 2.096218 CCGTCAGACAAACTAAAGCTGC 60.096 50.000 0.41 0.00 0.00 5.25
117 2511 8.503486 GCACTTGCATATATTTTTCTGATCTG 57.497 34.615 0.00 0.00 41.59 2.90
134 2528 5.491070 TGATCTGGGATAATTATTGGAGCG 58.509 41.667 0.00 0.00 0.00 5.03
135 2529 3.674997 TCTGGGATAATTATTGGAGCGC 58.325 45.455 0.00 0.00 0.00 5.92
139 2533 5.626142 TGGGATAATTATTGGAGCGCTTTA 58.374 37.500 13.26 4.41 0.00 1.85
144 2538 5.438761 AATTATTGGAGCGCTTTATGGTC 57.561 39.130 13.26 0.00 0.00 4.02
150 2544 2.880890 GGAGCGCTTTATGGTCATGATT 59.119 45.455 13.26 0.00 35.60 2.57
153 2547 4.708177 AGCGCTTTATGGTCATGATTACT 58.292 39.130 2.64 0.00 0.00 2.24
174 2568 2.287308 TGAGTAATTGCACAACGGTTGC 60.287 45.455 20.20 9.26 0.00 4.17
175 2569 1.678627 AGTAATTGCACAACGGTTGCA 59.321 42.857 20.20 11.92 36.72 4.08
185 2579 1.061857 CAACGGTTGCAAAACCAAAGC 59.938 47.619 8.09 0.00 42.97 3.51
187 2581 0.179086 CGGTTGCAAAACCAAAGCCT 60.179 50.000 0.00 0.00 42.97 4.58
189 2583 1.134551 GGTTGCAAAACCAAAGCCTCA 60.135 47.619 0.00 0.00 42.38 3.86
191 2585 2.529780 TGCAAAACCAAAGCCTCATG 57.470 45.000 0.00 0.00 0.00 3.07
202 2596 0.984230 AGCCTCATGAAAGGGAACGA 59.016 50.000 3.71 0.00 36.88 3.85
214 2608 2.932261 AGGGAACGAAAGGGATTATGC 58.068 47.619 0.00 0.00 0.00 3.14
217 2611 2.031683 GGAACGAAAGGGATTATGCACG 59.968 50.000 0.00 0.00 0.00 5.34
218 2612 2.396590 ACGAAAGGGATTATGCACGT 57.603 45.000 0.00 0.00 0.00 4.49
220 2614 3.864243 ACGAAAGGGATTATGCACGTTA 58.136 40.909 0.00 0.00 0.00 3.18
224 2618 5.521010 CGAAAGGGATTATGCACGTTAGTTA 59.479 40.000 0.00 0.00 0.00 2.24
237 2631 5.395778 GCACGTTAGTTATCATCGAGTAGTG 59.604 44.000 0.00 0.00 0.00 2.74
238 2632 5.395778 CACGTTAGTTATCATCGAGTAGTGC 59.604 44.000 0.00 0.00 0.00 4.40
239 2633 5.065602 ACGTTAGTTATCATCGAGTAGTGCA 59.934 40.000 0.00 0.00 0.00 4.57
241 2635 6.496571 GTTAGTTATCATCGAGTAGTGCACT 58.503 40.000 25.12 25.12 41.47 4.40
243 2637 6.694877 AGTTATCATCGAGTAGTGCACTAA 57.305 37.500 27.61 13.12 37.72 2.24
244 2638 7.278461 AGTTATCATCGAGTAGTGCACTAAT 57.722 36.000 27.61 26.62 37.72 1.73
245 2639 7.717568 AGTTATCATCGAGTAGTGCACTAATT 58.282 34.615 27.61 18.57 37.72 1.40
246 2640 7.863375 AGTTATCATCGAGTAGTGCACTAATTC 59.137 37.037 27.61 23.87 37.72 2.17
247 2641 5.576447 TCATCGAGTAGTGCACTAATTCA 57.424 39.130 27.61 16.75 37.72 2.57
248 2642 5.582550 TCATCGAGTAGTGCACTAATTCAG 58.417 41.667 27.61 19.97 37.72 3.02
254 2648 5.020132 AGTAGTGCACTAATTCAGAGGTCT 58.980 41.667 27.61 13.43 34.98 3.85
270 2664 0.872021 GTCTTCGCGCCCTCATACAG 60.872 60.000 0.00 0.00 0.00 2.74
292 2686 6.716628 ACAGAATGGTCATTAGACACACAATT 59.283 34.615 0.00 0.00 46.80 2.32
295 2689 4.397420 TGGTCATTAGACACACAATTGCT 58.603 39.130 5.05 0.00 46.80 3.91
297 2691 5.643348 TGGTCATTAGACACACAATTGCTAG 59.357 40.000 5.05 0.00 46.80 3.42
299 2693 6.371548 GGTCATTAGACACACAATTGCTAGAA 59.628 38.462 5.05 0.00 46.80 2.10
306 2700 6.017605 AGACACACAATTGCTAGAACAAAGAG 60.018 38.462 5.05 0.00 32.27 2.85
313 2707 4.258702 TGCTAGAACAAAGAGTGGAGAC 57.741 45.455 0.00 0.00 0.00 3.36
314 2708 3.246619 GCTAGAACAAAGAGTGGAGACG 58.753 50.000 0.00 0.00 0.00 4.18
315 2709 3.057456 GCTAGAACAAAGAGTGGAGACGA 60.057 47.826 0.00 0.00 0.00 4.20
318 2712 2.821991 ACAAAGAGTGGAGACGAAGG 57.178 50.000 0.00 0.00 0.00 3.46
319 2713 2.317040 ACAAAGAGTGGAGACGAAGGA 58.683 47.619 0.00 0.00 0.00 3.36
321 2715 3.134081 ACAAAGAGTGGAGACGAAGGAAA 59.866 43.478 0.00 0.00 0.00 3.13
323 2717 4.417426 AAGAGTGGAGACGAAGGAAAAA 57.583 40.909 0.00 0.00 0.00 1.94
345 2739 2.334006 AAGAGGGAGCTGAAGGAAGA 57.666 50.000 0.00 0.00 0.00 2.87
346 2740 1.864669 AGAGGGAGCTGAAGGAAGAG 58.135 55.000 0.00 0.00 0.00 2.85
349 2743 0.829990 GGGAGCTGAAGGAAGAGAGG 59.170 60.000 0.00 0.00 0.00 3.69
351 2745 2.183679 GGAGCTGAAGGAAGAGAGGAA 58.816 52.381 0.00 0.00 0.00 3.36
352 2746 2.168313 GGAGCTGAAGGAAGAGAGGAAG 59.832 54.545 0.00 0.00 0.00 3.46
355 2749 3.650461 AGCTGAAGGAAGAGAGGAAGTTT 59.350 43.478 0.00 0.00 0.00 2.66
356 2750 3.750652 GCTGAAGGAAGAGAGGAAGTTTG 59.249 47.826 0.00 0.00 0.00 2.93
357 2751 4.503991 GCTGAAGGAAGAGAGGAAGTTTGA 60.504 45.833 0.00 0.00 0.00 2.69
407 3096 2.262915 GAGTGGGAGGAGTGCGTG 59.737 66.667 0.00 0.00 0.00 5.34
410 3099 1.668151 GTGGGAGGAGTGCGTGAAC 60.668 63.158 0.00 0.00 0.00 3.18
413 3102 1.069090 GGAGGAGTGCGTGAACACA 59.931 57.895 5.80 0.00 43.23 3.72
417 3106 1.070758 AGGAGTGCGTGAACACAGAAT 59.929 47.619 5.80 0.00 43.23 2.40
464 3153 3.039252 TCTTGCAGGGAAAGGGAAAAA 57.961 42.857 0.00 0.00 0.00 1.94
587 3277 4.676196 GCACAATCTCAATTCACATGTCCC 60.676 45.833 0.00 0.00 0.00 4.46
589 3279 4.703575 ACAATCTCAATTCACATGTCCCTG 59.296 41.667 0.00 0.00 0.00 4.45
627 3317 6.260936 AGCAGACGTGGATTTATTTTATCTGG 59.739 38.462 0.00 0.00 33.29 3.86
630 3320 6.260936 AGACGTGGATTTATTTTATCTGGCAG 59.739 38.462 8.58 8.58 0.00 4.85
631 3321 5.885912 ACGTGGATTTATTTTATCTGGCAGT 59.114 36.000 15.27 4.62 0.00 4.40
632 3322 7.051623 ACGTGGATTTATTTTATCTGGCAGTA 58.948 34.615 15.27 3.59 0.00 2.74
633 3323 7.554835 ACGTGGATTTATTTTATCTGGCAGTAA 59.445 33.333 15.27 9.59 0.00 2.24
634 3324 7.855904 CGTGGATTTATTTTATCTGGCAGTAAC 59.144 37.037 15.27 0.00 0.00 2.50
635 3325 8.682710 GTGGATTTATTTTATCTGGCAGTAACA 58.317 33.333 15.27 6.32 0.00 2.41
636 3326 9.249053 TGGATTTATTTTATCTGGCAGTAACAA 57.751 29.630 15.27 4.53 0.00 2.83
637 3327 9.516314 GGATTTATTTTATCTGGCAGTAACAAC 57.484 33.333 15.27 0.00 0.00 3.32
681 3374 6.683974 TTTGATCTTATCCTGTTGCTAAGC 57.316 37.500 0.00 0.00 0.00 3.09
744 3437 2.159268 GCCCTAACCAAGTCGTACTCTC 60.159 54.545 0.00 0.00 0.00 3.20
754 3447 6.606395 ACCAAGTCGTACTCTCCTACATTAAT 59.394 38.462 0.00 0.00 0.00 1.40
755 3448 7.123847 ACCAAGTCGTACTCTCCTACATTAATT 59.876 37.037 0.00 0.00 0.00 1.40
757 3450 9.448294 CAAGTCGTACTCTCCTACATTAATTAC 57.552 37.037 0.00 0.00 0.00 1.89
758 3451 8.743085 AGTCGTACTCTCCTACATTAATTACA 57.257 34.615 0.00 0.00 0.00 2.41
759 3452 8.838365 AGTCGTACTCTCCTACATTAATTACAG 58.162 37.037 0.00 0.00 0.00 2.74
760 3453 8.834465 GTCGTACTCTCCTACATTAATTACAGA 58.166 37.037 0.00 0.00 0.00 3.41
781 3479 5.287035 CAGAAGTTTTGCACAAAGAGACAAC 59.713 40.000 0.00 0.00 0.00 3.32
782 3480 5.183904 AGAAGTTTTGCACAAAGAGACAACT 59.816 36.000 0.00 0.00 0.00 3.16
785 3483 1.024271 TGCACAAAGAGACAACTGCC 58.976 50.000 0.00 0.00 0.00 4.85
788 3486 1.166531 ACAAAGAGACAACTGCCCGC 61.167 55.000 0.00 0.00 0.00 6.13
795 3493 2.045926 CAACTGCCCGCTAAGCCT 60.046 61.111 0.00 0.00 0.00 4.58
798 3496 4.783621 CTGCCCGCTAAGCCTGCA 62.784 66.667 0.00 0.00 32.27 4.41
801 3499 2.045926 CCCGCTAAGCCTGCACTT 60.046 61.111 0.00 0.00 0.00 3.16
802 3500 2.401766 CCCGCTAAGCCTGCACTTG 61.402 63.158 0.01 0.00 0.00 3.16
803 3501 2.401766 CCGCTAAGCCTGCACTTGG 61.402 63.158 0.01 0.00 0.00 3.61
804 3502 1.375908 CGCTAAGCCTGCACTTGGA 60.376 57.895 4.83 0.00 30.20 3.53
805 3503 1.364626 CGCTAAGCCTGCACTTGGAG 61.365 60.000 4.83 0.00 30.20 3.86
806 3504 0.322008 GCTAAGCCTGCACTTGGAGT 60.322 55.000 4.83 0.00 30.20 3.85
807 3505 1.066143 GCTAAGCCTGCACTTGGAGTA 60.066 52.381 4.83 0.00 30.20 2.59
808 3506 2.420687 GCTAAGCCTGCACTTGGAGTAT 60.421 50.000 4.83 0.00 30.20 2.12
810 3508 1.577736 AGCCTGCACTTGGAGTATCT 58.422 50.000 0.00 0.00 33.73 1.98
811 3509 1.209019 AGCCTGCACTTGGAGTATCTG 59.791 52.381 0.00 0.00 33.73 2.90
814 3512 3.679389 CCTGCACTTGGAGTATCTGTTT 58.321 45.455 0.00 0.00 33.73 2.83
815 3513 4.832248 CCTGCACTTGGAGTATCTGTTTA 58.168 43.478 0.00 0.00 33.73 2.01
816 3514 4.631813 CCTGCACTTGGAGTATCTGTTTAC 59.368 45.833 0.00 0.00 33.73 2.01
817 3515 5.222079 TGCACTTGGAGTATCTGTTTACA 57.778 39.130 0.00 0.00 33.73 2.41
837 3594 2.157668 CAGGAATATTATCACCGCACGC 59.842 50.000 0.00 0.00 0.00 5.34
866 3623 1.135315 CCTGGCAAGACGAAATGCG 59.865 57.895 0.00 0.00 43.47 4.73
951 3709 2.225491 CCAAACGTACATCAACCACTGG 59.775 50.000 0.00 0.00 0.00 4.00
958 3716 0.331278 CATCAACCACTGGGCCCTTA 59.669 55.000 25.70 1.41 37.90 2.69
1215 3977 2.285743 GGGGAGGTGAGGGAGCTT 60.286 66.667 0.00 0.00 30.42 3.74
1224 3986 2.489073 GGTGAGGGAGCTTTCCTTCAAA 60.489 50.000 8.20 0.00 45.50 2.69
1236 3998 5.736207 GCTTTCCTTCAAAATGGAAGACGTT 60.736 40.000 4.58 0.00 45.66 3.99
1254 4016 3.199677 CGTTGTTGACAAGTTCCTGGTA 58.800 45.455 0.00 0.00 36.39 3.25
1273 4035 2.279582 ACATGTCGATGACGGTTCTC 57.720 50.000 0.00 0.00 40.21 2.87
1363 4125 0.512952 GGATCGCCACGATATTGCAC 59.487 55.000 1.95 0.00 47.00 4.57
1373 4135 2.221749 ACGATATTGCACATGCGATCAC 59.778 45.455 9.92 5.38 43.71 3.06
1374 4136 2.477754 CGATATTGCACATGCGATCACT 59.522 45.455 9.92 0.00 43.71 3.41
1393 4155 3.313249 CACTGACATCAACAAGCAAGTCA 59.687 43.478 0.00 0.00 35.07 3.41
1397 4159 4.398988 TGACATCAACAAGCAAGTCAAAGT 59.601 37.500 0.00 0.00 33.55 2.66
1399 4161 4.398988 ACATCAACAAGCAAGTCAAAGTGA 59.601 37.500 0.00 0.00 0.00 3.41
1426 4188 1.165270 AAGGCGTGCAAGGTACAATC 58.835 50.000 0.79 0.00 0.00 2.67
1495 4260 1.334160 TCAGGCTCTGTACACGGAAA 58.666 50.000 0.00 0.00 32.61 3.13
1557 4322 5.049129 AGTGCTAATGAAGTTGCTCTCAAAC 60.049 40.000 0.00 0.00 33.37 2.93
1662 4427 4.096984 GCAGTTTATGACAAGATCAAGGGG 59.903 45.833 0.00 0.00 41.93 4.79
1695 4460 0.313987 GGGCTTTTGTTTCTGTCGGG 59.686 55.000 0.00 0.00 0.00 5.14
1735 4501 8.359642 CAAGAAAAGTTTTGATGGACATCCTTA 58.640 33.333 5.36 0.00 37.02 2.69
1767 4539 1.416401 GTGGGAGGAAGTCAACTCACA 59.584 52.381 0.00 0.00 44.34 3.58
1836 4608 7.047891 TCGACAGAAAAAGGTATGCTCATATT 58.952 34.615 0.00 0.00 0.00 1.28
1837 4609 7.224753 TCGACAGAAAAAGGTATGCTCATATTC 59.775 37.037 0.00 0.00 0.00 1.75
1839 4612 8.218338 ACAGAAAAAGGTATGCTCATATTCAG 57.782 34.615 0.00 0.00 0.00 3.02
1845 4618 5.085920 AGGTATGCTCATATTCAGCTCTCT 58.914 41.667 5.26 0.00 37.79 3.10
1849 4622 3.321396 TGCTCATATTCAGCTCTCTCCTG 59.679 47.826 5.26 0.00 37.79 3.86
1855 4628 4.833478 ATTCAGCTCTCTCCTGCTTAAA 57.167 40.909 0.00 0.00 37.44 1.52
1867 4640 7.565398 TCTCTCCTGCTTAAAGATGGTAACTAT 59.435 37.037 0.00 0.00 37.61 2.12
1868 4641 8.777578 TCTCCTGCTTAAAGATGGTAACTATA 57.222 34.615 0.00 0.00 37.61 1.31
1893 4666 2.000429 CGTTTCCTACGGTAGGTTGG 58.000 55.000 28.55 15.42 46.42 3.77
1897 4671 2.555732 TCCTACGGTAGGTTGGGAAT 57.444 50.000 28.55 0.00 46.32 3.01
1906 4680 5.045724 ACGGTAGGTTGGGAATAATGTGTAA 60.046 40.000 0.00 0.00 0.00 2.41
1908 4682 6.544564 CGGTAGGTTGGGAATAATGTGTAAAT 59.455 38.462 0.00 0.00 0.00 1.40
1909 4683 7.067737 CGGTAGGTTGGGAATAATGTGTAAATT 59.932 37.037 0.00 0.00 0.00 1.82
1928 4702 9.104965 TGTAAATTAATCATGAAGTTACTCCCG 57.895 33.333 14.08 0.00 37.90 5.14
1929 4703 9.321562 GTAAATTAATCATGAAGTTACTCCCGA 57.678 33.333 0.00 0.00 35.51 5.14
1930 4704 8.980481 AAATTAATCATGAAGTTACTCCCGAT 57.020 30.769 0.00 0.00 0.00 4.18
1931 4705 7.969536 ATTAATCATGAAGTTACTCCCGATG 57.030 36.000 0.00 0.00 0.00 3.84
1932 4706 5.359194 AATCATGAAGTTACTCCCGATGT 57.641 39.130 0.00 0.00 0.00 3.06
1933 4707 4.819105 TCATGAAGTTACTCCCGATGTT 57.181 40.909 0.00 0.00 0.00 2.71
1934 4708 4.755411 TCATGAAGTTACTCCCGATGTTC 58.245 43.478 0.00 0.00 0.00 3.18
1935 4709 3.604875 TGAAGTTACTCCCGATGTTCC 57.395 47.619 0.00 0.00 0.00 3.62
1936 4710 2.094390 TGAAGTTACTCCCGATGTTCCG 60.094 50.000 0.00 0.00 0.00 4.30
1937 4711 1.843368 AGTTACTCCCGATGTTCCGA 58.157 50.000 0.00 0.00 0.00 4.55
1938 4712 2.385803 AGTTACTCCCGATGTTCCGAT 58.614 47.619 0.00 0.00 0.00 4.18
1939 4713 2.361438 AGTTACTCCCGATGTTCCGATC 59.639 50.000 0.00 0.00 0.00 3.69
1940 4714 2.061509 TACTCCCGATGTTCCGATCA 57.938 50.000 0.00 0.00 0.00 2.92
1941 4715 0.747255 ACTCCCGATGTTCCGATCAG 59.253 55.000 0.00 0.00 0.00 2.90
1942 4716 1.032794 CTCCCGATGTTCCGATCAGA 58.967 55.000 0.00 0.00 0.00 3.27
1943 4717 1.615883 CTCCCGATGTTCCGATCAGAT 59.384 52.381 0.00 0.00 0.00 2.90
1944 4718 1.341209 TCCCGATGTTCCGATCAGATG 59.659 52.381 0.00 0.00 0.00 2.90
1945 4719 1.069204 CCCGATGTTCCGATCAGATGT 59.931 52.381 0.00 0.00 0.00 3.06
1946 4720 2.296190 CCCGATGTTCCGATCAGATGTA 59.704 50.000 0.00 0.00 0.00 2.29
1947 4721 3.056536 CCCGATGTTCCGATCAGATGTAT 60.057 47.826 0.00 0.00 0.00 2.29
1948 4722 3.922850 CCGATGTTCCGATCAGATGTATG 59.077 47.826 0.00 0.00 0.00 2.39
1949 4723 3.366121 CGATGTTCCGATCAGATGTATGC 59.634 47.826 0.00 0.00 0.00 3.14
1950 4724 3.111853 TGTTCCGATCAGATGTATGCC 57.888 47.619 0.00 0.00 0.00 4.40
1951 4725 2.433970 TGTTCCGATCAGATGTATGCCA 59.566 45.455 0.00 0.00 0.00 4.92
1952 4726 3.062763 GTTCCGATCAGATGTATGCCAG 58.937 50.000 0.00 0.00 0.00 4.85
1953 4727 2.319844 TCCGATCAGATGTATGCCAGT 58.680 47.619 0.00 0.00 0.00 4.00
1954 4728 2.700371 TCCGATCAGATGTATGCCAGTT 59.300 45.455 0.00 0.00 0.00 3.16
1955 4729 3.895041 TCCGATCAGATGTATGCCAGTTA 59.105 43.478 0.00 0.00 0.00 2.24
1956 4730 4.343814 TCCGATCAGATGTATGCCAGTTAA 59.656 41.667 0.00 0.00 0.00 2.01
1957 4731 5.012046 TCCGATCAGATGTATGCCAGTTAAT 59.988 40.000 0.00 0.00 0.00 1.40
1958 4732 6.210584 TCCGATCAGATGTATGCCAGTTAATA 59.789 38.462 0.00 0.00 0.00 0.98
1959 4733 7.044181 CCGATCAGATGTATGCCAGTTAATAT 58.956 38.462 0.00 0.00 0.00 1.28
1960 4734 7.550551 CCGATCAGATGTATGCCAGTTAATATT 59.449 37.037 0.00 0.00 0.00 1.28
1961 4735 8.939929 CGATCAGATGTATGCCAGTTAATATTT 58.060 33.333 0.00 0.00 0.00 1.40
1964 4738 8.352201 TCAGATGTATGCCAGTTAATATTTTGC 58.648 33.333 0.00 0.00 0.00 3.68
1965 4739 8.136800 CAGATGTATGCCAGTTAATATTTTGCA 58.863 33.333 0.00 0.00 0.00 4.08
1966 4740 8.863086 AGATGTATGCCAGTTAATATTTTGCAT 58.137 29.630 0.00 4.50 40.67 3.96
1971 4745 7.880160 TGCCAGTTAATATTTTGCATACTCT 57.120 32.000 0.00 0.00 0.00 3.24
1972 4746 7.930217 TGCCAGTTAATATTTTGCATACTCTC 58.070 34.615 0.00 0.00 0.00 3.20
1973 4747 7.775093 TGCCAGTTAATATTTTGCATACTCTCT 59.225 33.333 0.00 0.00 0.00 3.10
1974 4748 8.072567 GCCAGTTAATATTTTGCATACTCTCTG 58.927 37.037 0.00 0.00 0.00 3.35
1975 4749 9.330063 CCAGTTAATATTTTGCATACTCTCTGA 57.670 33.333 0.00 0.00 0.00 3.27
1980 4754 7.976135 ATATTTTGCATACTCTCTGATGACC 57.024 36.000 0.00 0.00 0.00 4.02
1981 4755 4.824479 TTTGCATACTCTCTGATGACCA 57.176 40.909 0.00 0.00 0.00 4.02
1982 4756 4.397481 TTGCATACTCTCTGATGACCAG 57.603 45.455 0.00 0.00 44.27 4.00
1983 4757 2.102084 TGCATACTCTCTGATGACCAGC 59.898 50.000 0.00 0.00 42.62 4.85
1984 4758 2.364970 GCATACTCTCTGATGACCAGCT 59.635 50.000 0.00 0.00 42.62 4.24
1985 4759 3.181467 GCATACTCTCTGATGACCAGCTT 60.181 47.826 0.00 0.00 42.62 3.74
1986 4760 4.682859 GCATACTCTCTGATGACCAGCTTT 60.683 45.833 0.00 0.00 42.62 3.51
1987 4761 3.331478 ACTCTCTGATGACCAGCTTTG 57.669 47.619 0.00 0.00 42.62 2.77
1988 4762 2.902486 ACTCTCTGATGACCAGCTTTGA 59.098 45.455 0.00 0.00 42.62 2.69
1989 4763 3.260740 CTCTCTGATGACCAGCTTTGAC 58.739 50.000 0.00 0.00 42.62 3.18
1990 4764 1.998315 CTCTGATGACCAGCTTTGACG 59.002 52.381 0.00 0.00 42.62 4.35
1991 4765 1.081892 CTGATGACCAGCTTTGACGG 58.918 55.000 0.00 0.00 35.89 4.79
1992 4766 0.396435 TGATGACCAGCTTTGACGGT 59.604 50.000 0.00 0.00 35.12 4.83
1993 4767 1.202758 TGATGACCAGCTTTGACGGTT 60.203 47.619 0.00 0.00 31.63 4.44
1994 4768 2.037902 TGATGACCAGCTTTGACGGTTA 59.962 45.455 0.00 0.00 31.63 2.85
1995 4769 2.623878 TGACCAGCTTTGACGGTTAA 57.376 45.000 0.00 0.00 31.63 2.01
1996 4770 3.134574 TGACCAGCTTTGACGGTTAAT 57.865 42.857 0.00 0.00 31.63 1.40
1997 4771 3.482436 TGACCAGCTTTGACGGTTAATT 58.518 40.909 0.00 0.00 31.63 1.40
1998 4772 3.886505 TGACCAGCTTTGACGGTTAATTT 59.113 39.130 0.00 0.00 31.63 1.82
1999 4773 4.339814 TGACCAGCTTTGACGGTTAATTTT 59.660 37.500 0.00 0.00 31.63 1.82
2000 4774 5.163499 TGACCAGCTTTGACGGTTAATTTTT 60.163 36.000 0.00 0.00 31.63 1.94
2026 4800 9.647797 TTCATTAACATGTAAGTGAGTAATCGT 57.352 29.630 0.00 0.00 0.00 3.73
2067 4841 9.935682 TTTCATGAAAAATCTGATAGCGTAATC 57.064 29.630 18.45 0.00 0.00 1.75
2068 4842 8.087982 TCATGAAAAATCTGATAGCGTAATCC 57.912 34.615 0.00 0.00 0.00 3.01
2069 4843 6.861065 TGAAAAATCTGATAGCGTAATCCC 57.139 37.500 0.00 0.00 0.00 3.85
2070 4844 6.591935 TGAAAAATCTGATAGCGTAATCCCT 58.408 36.000 0.00 0.00 0.00 4.20
2071 4845 7.732025 TGAAAAATCTGATAGCGTAATCCCTA 58.268 34.615 0.00 0.00 0.00 3.53
2072 4846 7.656137 TGAAAAATCTGATAGCGTAATCCCTAC 59.344 37.037 0.00 0.00 0.00 3.18
2073 4847 5.662674 AATCTGATAGCGTAATCCCTACC 57.337 43.478 0.00 0.00 0.00 3.18
2074 4848 4.108501 TCTGATAGCGTAATCCCTACCA 57.891 45.455 0.00 0.00 0.00 3.25
2075 4849 4.673968 TCTGATAGCGTAATCCCTACCAT 58.326 43.478 0.00 0.00 0.00 3.55
2076 4850 5.823312 TCTGATAGCGTAATCCCTACCATA 58.177 41.667 0.00 0.00 0.00 2.74
2077 4851 6.432581 TCTGATAGCGTAATCCCTACCATAT 58.567 40.000 0.00 0.00 0.00 1.78
2078 4852 6.321435 TCTGATAGCGTAATCCCTACCATATG 59.679 42.308 0.00 0.00 0.00 1.78
2079 4853 6.192044 TGATAGCGTAATCCCTACCATATGA 58.808 40.000 3.65 0.00 0.00 2.15
2080 4854 6.666113 TGATAGCGTAATCCCTACCATATGAA 59.334 38.462 3.65 0.00 0.00 2.57
2081 4855 7.344612 TGATAGCGTAATCCCTACCATATGAAT 59.655 37.037 3.65 0.00 0.00 2.57
2082 4856 6.374417 AGCGTAATCCCTACCATATGAATT 57.626 37.500 3.65 0.00 0.00 2.17
2083 4857 6.173339 AGCGTAATCCCTACCATATGAATTG 58.827 40.000 3.65 0.00 0.00 2.32
2084 4858 6.013725 AGCGTAATCCCTACCATATGAATTGA 60.014 38.462 3.65 0.00 0.00 2.57
2085 4859 6.653320 GCGTAATCCCTACCATATGAATTGAA 59.347 38.462 3.65 0.00 0.00 2.69
2086 4860 7.174253 GCGTAATCCCTACCATATGAATTGAAA 59.826 37.037 3.65 0.00 0.00 2.69
2087 4861 9.231297 CGTAATCCCTACCATATGAATTGAAAT 57.769 33.333 3.65 0.00 0.00 2.17
2184 4958 5.431765 AGTAATCAAGTGTAAGGCTGATGG 58.568 41.667 0.00 0.00 0.00 3.51
2185 4959 4.574674 AATCAAGTGTAAGGCTGATGGA 57.425 40.909 0.00 0.00 0.00 3.41
2186 4960 3.616956 TCAAGTGTAAGGCTGATGGAG 57.383 47.619 0.00 0.00 0.00 3.86
2187 4961 2.906389 TCAAGTGTAAGGCTGATGGAGT 59.094 45.455 0.00 0.00 0.00 3.85
2190 4964 3.441101 AGTGTAAGGCTGATGGAGTACA 58.559 45.455 0.00 0.00 0.00 2.90
2191 4965 4.033709 AGTGTAAGGCTGATGGAGTACAT 58.966 43.478 0.00 0.00 44.18 2.29
2192 4966 5.208890 AGTGTAAGGCTGATGGAGTACATA 58.791 41.667 0.00 0.00 40.72 2.29
2195 4969 6.425114 GTGTAAGGCTGATGGAGTACATAATG 59.575 42.308 0.00 0.00 40.72 1.90
2196 4970 5.636903 AAGGCTGATGGAGTACATAATGT 57.363 39.130 0.00 0.00 40.72 2.71
2197 4971 5.220710 AGGCTGATGGAGTACATAATGTC 57.779 43.478 0.00 0.00 40.72 3.06
2198 4972 4.655649 AGGCTGATGGAGTACATAATGTCA 59.344 41.667 0.00 0.00 40.72 3.58
2200 4974 5.822519 GGCTGATGGAGTACATAATGTCAAA 59.177 40.000 0.00 0.00 40.72 2.69
2201 4975 6.017605 GGCTGATGGAGTACATAATGTCAAAG 60.018 42.308 0.00 0.00 40.72 2.77
2202 4976 6.763135 GCTGATGGAGTACATAATGTCAAAGA 59.237 38.462 0.00 0.00 40.72 2.52
2205 4979 9.685276 TGATGGAGTACATAATGTCAAAGATTT 57.315 29.630 0.00 0.00 40.72 2.17
2228 5006 4.899352 AGAGTAGCTGATTCCTTTGTGT 57.101 40.909 0.00 0.00 0.00 3.72
2232 5010 2.146342 AGCTGATTCCTTTGTGTCACG 58.854 47.619 0.00 0.00 0.00 4.35
2272 5051 4.073293 ACCTTGTATTAGAGCATTCCCG 57.927 45.455 0.00 0.00 0.00 5.14
2321 5107 8.482943 CCATATGAATGAAATATGGCATCCAAT 58.517 33.333 1.65 0.00 46.15 3.16
2322 5108 9.313118 CATATGAATGAAATATGGCATCCAATG 57.687 33.333 1.65 0.00 34.13 2.82
2387 5173 1.668419 AGCGTTTGAGTTGTCTTGCT 58.332 45.000 0.00 0.00 0.00 3.91
2408 5194 5.631992 GCTTTTGGCACTAAGAACTGTATC 58.368 41.667 11.57 0.00 41.35 2.24
2423 5209 9.717942 AAGAACTGTATCAGATTAAGATATGGC 57.282 33.333 3.70 0.00 35.18 4.40
2432 5218 7.665690 TCAGATTAAGATATGGCAACTCTCTC 58.334 38.462 0.00 0.00 37.61 3.20
2434 5220 8.149647 CAGATTAAGATATGGCAACTCTCTCTT 58.850 37.037 0.00 0.00 37.61 2.85
2436 5222 9.988815 GATTAAGATATGGCAACTCTCTCTTTA 57.011 33.333 0.00 0.00 37.61 1.85
2465 5251 9.185192 GCATCTACAACCATAATTGCTTAATTC 57.815 33.333 0.00 0.00 32.47 2.17
2471 5257 6.144078 ACCATAATTGCTTAATTCGGTTCC 57.856 37.500 0.00 0.00 29.01 3.62
2472 5258 5.068591 ACCATAATTGCTTAATTCGGTTCCC 59.931 40.000 0.00 0.00 29.01 3.97
2474 5260 2.588464 TTGCTTAATTCGGTTCCCCA 57.412 45.000 0.00 0.00 0.00 4.96
2481 5267 2.951229 ATTCGGTTCCCCATATGTCC 57.049 50.000 1.24 0.00 0.00 4.02
2484 5270 0.179029 CGGTTCCCCATATGTCCACC 60.179 60.000 1.24 1.73 0.00 4.61
2510 5321 3.215975 CGTTTTGGACCCTAACTTTCCA 58.784 45.455 0.00 0.00 37.66 3.53
2523 5334 2.820330 ACTTTCCATGCAAAACAACCG 58.180 42.857 0.00 0.00 0.00 4.44
2527 5338 0.529337 CCATGCAAAACAACCGCACA 60.529 50.000 0.00 0.00 38.73 4.57
2552 5363 7.616528 TCTCACATTATCCTCATATTGTCCA 57.383 36.000 0.00 0.00 30.07 4.02
2554 5365 7.290948 TCTCACATTATCCTCATATTGTCCAGT 59.709 37.037 0.00 0.00 30.07 4.00
2557 5368 7.172190 CACATTATCCTCATATTGTCCAGTCAC 59.828 40.741 0.00 0.00 30.07 3.67
2558 5369 4.696479 ATCCTCATATTGTCCAGTCACC 57.304 45.455 0.00 0.00 0.00 4.02
2559 5370 3.449918 TCCTCATATTGTCCAGTCACCA 58.550 45.455 0.00 0.00 0.00 4.17
2560 5371 3.452264 TCCTCATATTGTCCAGTCACCAG 59.548 47.826 0.00 0.00 0.00 4.00
2561 5372 3.201290 CTCATATTGTCCAGTCACCAGC 58.799 50.000 0.00 0.00 0.00 4.85
2562 5373 2.571202 TCATATTGTCCAGTCACCAGCA 59.429 45.455 0.00 0.00 0.00 4.41
2563 5374 3.200605 TCATATTGTCCAGTCACCAGCAT 59.799 43.478 0.00 0.00 0.00 3.79
2564 5375 4.408596 TCATATTGTCCAGTCACCAGCATA 59.591 41.667 0.00 0.00 0.00 3.14
2565 5376 3.939740 ATTGTCCAGTCACCAGCATAT 57.060 42.857 0.00 0.00 0.00 1.78
2566 5377 2.696989 TGTCCAGTCACCAGCATATG 57.303 50.000 0.00 0.00 0.00 1.78
2567 5378 2.187100 TGTCCAGTCACCAGCATATGA 58.813 47.619 6.97 0.00 0.00 2.15
2568 5379 2.169144 TGTCCAGTCACCAGCATATGAG 59.831 50.000 6.97 0.00 0.00 2.90
2569 5380 2.169352 GTCCAGTCACCAGCATATGAGT 59.831 50.000 6.97 0.00 0.00 3.41
2570 5381 2.169144 TCCAGTCACCAGCATATGAGTG 59.831 50.000 6.97 10.39 43.20 3.51
2571 5382 2.558378 CAGTCACCAGCATATGAGTGG 58.442 52.381 18.51 18.51 40.93 4.00
2572 5383 2.093288 CAGTCACCAGCATATGAGTGGT 60.093 50.000 19.57 19.57 45.83 4.16
2580 5391 2.042464 GCATATGAGTGGTGGAGAGGA 58.958 52.381 6.97 0.00 0.00 3.71
2584 5395 2.398754 TGAGTGGTGGAGAGGAAGAA 57.601 50.000 0.00 0.00 0.00 2.52
2591 5402 3.909995 TGGTGGAGAGGAAGAATGAGAAA 59.090 43.478 0.00 0.00 0.00 2.52
2592 5403 4.350816 TGGTGGAGAGGAAGAATGAGAAAA 59.649 41.667 0.00 0.00 0.00 2.29
2593 5404 4.940654 GGTGGAGAGGAAGAATGAGAAAAG 59.059 45.833 0.00 0.00 0.00 2.27
2597 5408 6.939163 TGGAGAGGAAGAATGAGAAAAGAAAG 59.061 38.462 0.00 0.00 0.00 2.62
2603 5414 9.413734 AGGAAGAATGAGAAAAGAAAGAAAGAA 57.586 29.630 0.00 0.00 0.00 2.52
2616 5427 9.844257 AAAGAAAGAAAGAATGAAGAGAGAGAA 57.156 29.630 0.00 0.00 0.00 2.87
2629 5440 3.071747 AGAGAGAGAAAAAGGTGGTCCAC 59.928 47.826 14.13 14.13 35.89 4.02
2657 5468 1.208535 CAAATCCTACGTGGCACCCTA 59.791 52.381 12.86 0.68 35.26 3.53
2658 5469 0.828677 AATCCTACGTGGCACCCTAC 59.171 55.000 12.86 0.00 35.26 3.18
2659 5470 1.047034 ATCCTACGTGGCACCCTACC 61.047 60.000 12.86 0.00 35.26 3.18
2660 5471 2.728435 CCTACGTGGCACCCTACCC 61.728 68.421 12.86 0.00 0.00 3.69
2661 5472 1.985662 CTACGTGGCACCCTACCCA 60.986 63.158 12.86 0.00 0.00 4.51
2662 5473 1.956629 CTACGTGGCACCCTACCCAG 61.957 65.000 12.86 0.00 0.00 4.45
2663 5474 2.444004 TACGTGGCACCCTACCCAGA 62.444 60.000 12.86 0.00 0.00 3.86
2664 5475 2.669240 GTGGCACCCTACCCAGAC 59.331 66.667 6.29 0.00 0.00 3.51
2665 5476 2.205749 TGGCACCCTACCCAGACA 59.794 61.111 0.00 0.00 0.00 3.41
2666 5477 2.221299 TGGCACCCTACCCAGACAC 61.221 63.158 0.00 0.00 0.00 3.67
2670 5481 2.683933 CCCTACCCAGACACGCCT 60.684 66.667 0.00 0.00 0.00 5.52
2677 5488 1.341679 ACCCAGACACGCCTAGACATA 60.342 52.381 0.00 0.00 0.00 2.29
2685 5496 3.510360 ACACGCCTAGACATACCCATATC 59.490 47.826 0.00 0.00 0.00 1.63
2688 5499 3.769844 CGCCTAGACATACCCATATCCTT 59.230 47.826 0.00 0.00 0.00 3.36
2690 5501 4.162509 GCCTAGACATACCCATATCCTTCC 59.837 50.000 0.00 0.00 0.00 3.46
2699 5510 7.295672 ACATACCCATATCCTTCCCATATATGG 59.704 40.741 22.97 22.97 46.54 2.74
2700 5511 5.624016 ACCCATATCCTTCCCATATATGGT 58.376 41.667 26.59 12.21 45.96 3.55
2713 5524 6.971240 TCCCATATATGGTTTGGATATGAGGA 59.029 38.462 26.59 11.51 46.65 3.71
2723 5534 6.202954 GGTTTGGATATGAGGATTTGTAGACG 59.797 42.308 0.00 0.00 0.00 4.18
2735 5546 3.434319 TAGACGGACCGGACACGC 61.434 66.667 20.00 6.03 39.22 5.34
2752 5563 1.072505 GCCCGGACAAAGTGAGGAA 59.927 57.895 0.73 0.00 0.00 3.36
2804 5617 2.902705 TGTCCATACAGTTATCGGGC 57.097 50.000 0.00 0.00 0.00 6.13
2805 5618 2.394632 TGTCCATACAGTTATCGGGCT 58.605 47.619 0.00 0.00 0.00 5.19
2818 5631 3.311110 GGGCTGTCCGGTGAGACA 61.311 66.667 0.00 0.00 44.38 3.41
2840 5653 2.610859 AGGGCTCCGGTTGGTGAT 60.611 61.111 0.00 0.00 36.30 3.06
2848 5661 1.066430 TCCGGTTGGTGATGCTCTTAC 60.066 52.381 0.00 0.00 36.30 2.34
2850 5663 2.271800 CGGTTGGTGATGCTCTTACTC 58.728 52.381 0.00 0.00 0.00 2.59
2934 5747 6.992063 GGACTGCCCTTATATCATGTATTG 57.008 41.667 0.00 0.00 0.00 1.90
2935 5748 6.711277 GGACTGCCCTTATATCATGTATTGA 58.289 40.000 0.00 0.00 39.12 2.57
2936 5749 7.341805 GGACTGCCCTTATATCATGTATTGAT 58.658 38.462 0.00 0.00 46.86 2.57
2946 5759 4.400529 TCATGTATTGATACACGCACCT 57.599 40.909 6.01 0.00 45.11 4.00
2947 5760 4.765273 TCATGTATTGATACACGCACCTT 58.235 39.130 6.01 0.00 45.11 3.50
2948 5761 5.908341 TCATGTATTGATACACGCACCTTA 58.092 37.500 6.01 0.00 45.11 2.69
2949 5762 6.342111 TCATGTATTGATACACGCACCTTAA 58.658 36.000 6.01 0.00 45.11 1.85
2950 5763 6.478673 TCATGTATTGATACACGCACCTTAAG 59.521 38.462 6.01 0.00 45.11 1.85
2951 5764 5.726397 TGTATTGATACACGCACCTTAAGT 58.274 37.500 0.97 0.00 38.28 2.24
2952 5765 6.865411 TGTATTGATACACGCACCTTAAGTA 58.135 36.000 0.97 0.00 38.28 2.24
2953 5766 6.976349 TGTATTGATACACGCACCTTAAGTAG 59.024 38.462 0.97 0.00 38.28 2.57
2954 5767 5.648178 TTGATACACGCACCTTAAGTAGA 57.352 39.130 0.97 0.00 0.00 2.59
2955 5768 5.648178 TGATACACGCACCTTAAGTAGAA 57.352 39.130 0.97 0.00 0.00 2.10
2956 5769 5.404946 TGATACACGCACCTTAAGTAGAAC 58.595 41.667 0.97 0.00 0.00 3.01
2957 5770 3.738830 ACACGCACCTTAAGTAGAACA 57.261 42.857 0.97 0.00 0.00 3.18
2958 5771 3.387397 ACACGCACCTTAAGTAGAACAC 58.613 45.455 0.97 0.00 0.00 3.32
2959 5772 2.735134 CACGCACCTTAAGTAGAACACC 59.265 50.000 0.97 0.00 0.00 4.16
2960 5773 2.631545 ACGCACCTTAAGTAGAACACCT 59.368 45.455 0.97 0.00 0.00 4.00
2961 5774 3.828451 ACGCACCTTAAGTAGAACACCTA 59.172 43.478 0.97 0.00 0.00 3.08
2962 5775 4.171754 CGCACCTTAAGTAGAACACCTAC 58.828 47.826 0.97 0.00 46.34 3.18
2971 5784 4.803098 GTAGAACACCTACCACACTGAT 57.197 45.455 0.00 0.00 41.45 2.90
2972 5785 3.963428 AGAACACCTACCACACTGATC 57.037 47.619 0.00 0.00 0.00 2.92
2973 5786 2.567615 AGAACACCTACCACACTGATCC 59.432 50.000 0.00 0.00 0.00 3.36
2974 5787 1.276622 ACACCTACCACACTGATCCC 58.723 55.000 0.00 0.00 0.00 3.85
2975 5788 0.541863 CACCTACCACACTGATCCCC 59.458 60.000 0.00 0.00 0.00 4.81
2976 5789 0.417841 ACCTACCACACTGATCCCCT 59.582 55.000 0.00 0.00 0.00 4.79
3015 5828 3.865745 CCTTGTCGTGTCCTCACATATTC 59.134 47.826 0.00 0.00 44.02 1.75
3017 5830 4.371855 TGTCGTGTCCTCACATATTCTC 57.628 45.455 0.00 0.00 44.02 2.87
3018 5831 4.017126 TGTCGTGTCCTCACATATTCTCT 58.983 43.478 0.00 0.00 44.02 3.10
3040 5853 2.358003 GCTCGCTCCAGTGCTTGT 60.358 61.111 0.00 0.00 0.00 3.16
3045 5858 0.038251 CGCTCCAGTGCTTGTAGTCA 60.038 55.000 0.00 0.00 0.00 3.41
3048 5861 2.534298 CTCCAGTGCTTGTAGTCATCG 58.466 52.381 0.00 0.00 0.00 3.84
3052 5865 3.511699 CAGTGCTTGTAGTCATCGCTAA 58.488 45.455 0.00 0.00 0.00 3.09
3056 5869 3.192633 TGCTTGTAGTCATCGCTAAGTGA 59.807 43.478 0.00 0.00 0.00 3.41
3058 5871 4.806247 GCTTGTAGTCATCGCTAAGTGATT 59.194 41.667 0.00 0.00 29.68 2.57
3061 5874 7.169982 GCTTGTAGTCATCGCTAAGTGATTTAT 59.830 37.037 0.00 0.00 29.68 1.40
3063 5876 6.923508 TGTAGTCATCGCTAAGTGATTTATGG 59.076 38.462 0.00 0.00 29.68 2.74
3070 5883 4.442893 CGCTAAGTGATTTATGGACCTGGA 60.443 45.833 0.00 0.00 0.00 3.86
3103 5916 8.973835 TTTTACTTTTGGTGTTCTTTGTACTG 57.026 30.769 0.00 0.00 0.00 2.74
3106 5919 2.719531 TGGTGTTCTTTGTACTGCCA 57.280 45.000 0.00 0.00 0.00 4.92
3108 5921 2.884012 TGGTGTTCTTTGTACTGCCATG 59.116 45.455 0.00 0.00 0.00 3.66
3118 5931 6.763135 TCTTTGTACTGCCATGATAGTTGATC 59.237 38.462 7.06 0.00 34.84 2.92
3136 5949 8.655935 AGTTGATCAATAAATGAATATCCCCC 57.344 34.615 12.12 0.00 42.54 5.40
3138 5951 9.093458 GTTGATCAATAAATGAATATCCCCCTT 57.907 33.333 12.12 0.00 42.54 3.95
3139 5952 8.654485 TGATCAATAAATGAATATCCCCCTTG 57.346 34.615 0.00 0.00 42.54 3.61
3140 5953 6.916360 TCAATAAATGAATATCCCCCTTGC 57.084 37.500 0.00 0.00 34.30 4.01
3246 6062 3.832490 GGAAAATTCCCTACCATATGGCC 59.168 47.826 22.18 6.28 41.62 5.36
3247 6063 4.449229 GGAAAATTCCCTACCATATGGCCT 60.449 45.833 22.18 5.85 41.62 5.19
3248 6064 4.832560 AAATTCCCTACCATATGGCCTT 57.167 40.909 22.18 5.07 39.32 4.35
3249 6065 4.832560 AATTCCCTACCATATGGCCTTT 57.167 40.909 22.18 4.68 39.32 3.11
3250 6066 5.941146 AATTCCCTACCATATGGCCTTTA 57.059 39.130 22.18 5.68 39.32 1.85
3267 6087 4.481463 CCTTTACGGCAATACAAACCTTG 58.519 43.478 0.00 0.00 0.00 3.61
3394 6215 7.845037 TGCACAACAATCCATAAAAATATCCA 58.155 30.769 0.00 0.00 0.00 3.41
3395 6216 7.980662 TGCACAACAATCCATAAAAATATCCAG 59.019 33.333 0.00 0.00 0.00 3.86
3455 6280 5.999044 AGACATCATTGTAGCTTGAGGATT 58.001 37.500 4.89 0.00 35.79 3.01
3478 6303 4.996758 TGGTCTTATCATTGTGGCGATATG 59.003 41.667 0.00 0.00 0.00 1.78
3609 6451 4.894784 TCATATCTCCCGTTCATAAAGCC 58.105 43.478 0.00 0.00 0.00 4.35
3759 6624 3.181497 CGCATTCTCCAAGGGTAACAATG 60.181 47.826 0.00 0.00 39.74 2.82
3863 6728 6.173339 TCAAATGGAACCTCTTAGTGATGAC 58.827 40.000 0.00 0.00 0.00 3.06
3907 6772 9.109393 CCATAAACGGATATTTTCTCAAGAGAA 57.891 33.333 8.37 8.37 44.94 2.87
3923 6788 3.303938 AGAGAATGGATGTCCTCGTGAT 58.696 45.455 0.09 0.00 36.82 3.06
4041 6906 7.056006 AGTAAATTCACATGATGAGTGGCATA 58.944 34.615 0.00 0.00 38.99 3.14
4072 6937 3.039011 AGTCTATTGGGCGTGGACTTAT 58.961 45.455 0.00 0.00 34.26 1.73
4077 6942 0.108520 TGGGCGTGGACTTATCGAAC 60.109 55.000 0.00 0.00 0.00 3.95
4134 6999 4.262036 CGTTCAGCTATTATGACCTGCCTA 60.262 45.833 0.00 0.00 0.00 3.93
4183 7048 9.717942 ATATCTAAGCATGTTTCCAGAAGATAC 57.282 33.333 11.60 0.00 0.00 2.24
4191 7056 6.392625 TGTTTCCAGAAGATACTAGGATCG 57.607 41.667 9.38 0.00 0.00 3.69
4192 7057 6.127101 TGTTTCCAGAAGATACTAGGATCGA 58.873 40.000 9.38 0.00 0.00 3.59
4252 7117 5.234116 GGTTCATCCAATGTGAAACAACAAC 59.766 40.000 0.00 0.00 43.47 3.32
4477 7360 2.158885 GGCTGTCCCTCCAGAAGATTAC 60.159 54.545 0.00 0.00 34.23 1.89
4502 7385 2.878406 AGAAGAACATGAAACCACACCG 59.122 45.455 0.00 0.00 0.00 4.94
4516 7399 0.317160 ACACCGCTCGAATCTGTGAA 59.683 50.000 13.22 0.00 0.00 3.18
4527 7410 6.563010 GCTCGAATCTGTGAATATGCTACAAC 60.563 42.308 0.00 0.00 0.00 3.32
4574 7460 5.157781 CCTGCTATTAGTCTAATGTCTCGC 58.842 45.833 14.32 9.42 0.00 5.03
4755 7677 2.550830 ACAGGTGTTGGATGTGAGTC 57.449 50.000 0.00 0.00 0.00 3.36
4897 7825 4.333926 GGAAGAGTTGAGTTGTATCCATGC 59.666 45.833 0.00 0.00 0.00 4.06
4970 7898 7.390162 AGGAAGTTTGAAATTTTGTTTGAGCAA 59.610 29.630 0.00 0.00 0.00 3.91
5043 7971 4.533222 CAACGTCCAAAGTGTAACCATTC 58.467 43.478 0.00 0.00 37.80 2.67
5048 7976 5.806502 CGTCCAAAGTGTAACCATTCGTATA 59.193 40.000 0.00 0.00 37.80 1.47
5050 7978 7.148606 CGTCCAAAGTGTAACCATTCGTATAAA 60.149 37.037 0.00 0.00 37.80 1.40
5051 7979 8.505625 GTCCAAAGTGTAACCATTCGTATAAAA 58.494 33.333 0.00 0.00 37.80 1.52
5052 7980 9.064706 TCCAAAGTGTAACCATTCGTATAAAAA 57.935 29.630 0.00 0.00 37.80 1.94
5189 8117 1.183549 TAAGAGAGAACCCCTCGCAC 58.816 55.000 0.00 0.00 46.49 5.34
5192 8120 1.536662 AGAGAACCCCTCGCACCTT 60.537 57.895 0.00 0.00 46.49 3.50
5195 8123 1.072505 GAACCCCTCGCACCTTTCA 59.927 57.895 0.00 0.00 0.00 2.69
5198 8126 1.002134 CCCCTCGCACCTTTCACAT 60.002 57.895 0.00 0.00 0.00 3.21
5244 8172 0.962356 GGAGGTGCAACAGGTGGATG 60.962 60.000 3.64 0.00 39.98 3.51
5261 8189 1.003580 GATGTGGGACTGCTTGGAAGA 59.996 52.381 0.00 0.00 0.00 2.87
5282 8210 1.195115 TGCCGGCTCTTCATACTCTT 58.805 50.000 29.70 0.00 0.00 2.85
5297 8225 1.174783 CTCTTGCATTGCAGAGCCTT 58.825 50.000 18.58 0.00 40.61 4.35
5319 8247 0.036732 CCAAGGGCTGCTACTTGTCA 59.963 55.000 24.67 0.00 41.84 3.58
5384 8312 1.978455 ATTCGCCGGGCCAAGTCATA 61.978 55.000 14.55 0.00 0.00 2.15
5421 8349 1.663379 GCCCAAGGCGGTAATGGTTC 61.663 60.000 0.00 0.00 39.62 3.62
5430 8358 1.942657 CGGTAATGGTTCTGCTCCATG 59.057 52.381 0.00 0.00 43.85 3.66
5438 8366 1.476891 GTTCTGCTCCATGTCGGTCTA 59.523 52.381 0.00 0.00 35.57 2.59
5440 8368 0.817654 CTGCTCCATGTCGGTCTACA 59.182 55.000 0.00 0.00 35.57 2.74
5444 8372 1.825474 CTCCATGTCGGTCTACAGGTT 59.175 52.381 0.00 0.00 35.57 3.50
5445 8373 2.233922 CTCCATGTCGGTCTACAGGTTT 59.766 50.000 0.00 0.00 35.57 3.27
5451 8379 3.872771 TGTCGGTCTACAGGTTTCAAAAC 59.127 43.478 0.00 0.00 38.17 2.43
5492 8423 3.303938 TGGTGATTTGTTTGACATGGGT 58.696 40.909 0.00 0.00 0.00 4.51
5529 8460 1.001974 CCCTTCGGAGTGTCAATGTCA 59.998 52.381 0.00 0.00 0.00 3.58
5535 8466 4.384940 TCGGAGTGTCAATGTCAAATTCA 58.615 39.130 0.00 0.00 0.00 2.57
5536 8467 4.819088 TCGGAGTGTCAATGTCAAATTCAA 59.181 37.500 0.00 0.00 0.00 2.69
5537 8468 5.298026 TCGGAGTGTCAATGTCAAATTCAAA 59.702 36.000 0.00 0.00 0.00 2.69
5538 8469 6.016360 TCGGAGTGTCAATGTCAAATTCAAAT 60.016 34.615 0.00 0.00 0.00 2.32
5539 8470 6.642131 CGGAGTGTCAATGTCAAATTCAAATT 59.358 34.615 0.00 0.00 0.00 1.82
5540 8471 7.148918 CGGAGTGTCAATGTCAAATTCAAATTC 60.149 37.037 0.00 0.00 0.00 2.17
5541 8472 7.869429 GGAGTGTCAATGTCAAATTCAAATTCT 59.131 33.333 0.00 0.00 0.00 2.40
5542 8473 8.583810 AGTGTCAATGTCAAATTCAAATTCTG 57.416 30.769 0.00 0.00 0.00 3.02
5543 8474 7.170320 AGTGTCAATGTCAAATTCAAATTCTGC 59.830 33.333 0.00 0.00 0.00 4.26
5544 8475 6.424509 TGTCAATGTCAAATTCAAATTCTGCC 59.575 34.615 0.00 0.00 0.00 4.85
5552 8483 1.167851 TCAAATTCTGCCCTTCGCTG 58.832 50.000 0.00 0.00 38.78 5.18
5554 8485 1.598701 AAATTCTGCCCTTCGCTGCC 61.599 55.000 0.00 0.00 38.78 4.85
5555 8489 2.769652 AATTCTGCCCTTCGCTGCCA 62.770 55.000 0.00 0.00 38.78 4.92
5590 8533 0.883833 AAAGCGAATTCTGCACTGGG 59.116 50.000 19.45 0.00 33.85 4.45
5618 8561 0.616395 TCCGTGCCCATCCTAACAGA 60.616 55.000 0.00 0.00 0.00 3.41
5623 8569 0.470341 GCCCATCCTAACAGACCCTC 59.530 60.000 0.00 0.00 0.00 4.30
5629 8575 2.097825 TCCTAACAGACCCTCTTACGC 58.902 52.381 0.00 0.00 0.00 4.42
5652 8598 4.034510 CCTCCGTACAAGGTACGTAACTAG 59.965 50.000 14.76 5.45 39.09 2.57
5657 8603 5.006165 CGTACAAGGTACGTAACTAGAGAGG 59.994 48.000 14.76 2.16 36.31 3.69
5658 8604 4.916183 ACAAGGTACGTAACTAGAGAGGT 58.084 43.478 14.76 3.13 0.00 3.85
5670 8617 4.036518 ACTAGAGAGGTCCATGATGCTTT 58.963 43.478 0.00 0.00 0.00 3.51
5672 8619 3.618351 AGAGAGGTCCATGATGCTTTTG 58.382 45.455 0.00 0.00 0.00 2.44
5771 8748 1.132029 CGACAGTGACGACGACGAT 59.868 57.895 15.32 0.00 42.66 3.73
5792 8805 1.694696 GAGTGGGAGTGAAGAACCTGT 59.305 52.381 0.00 0.00 0.00 4.00
5814 8828 5.641636 TGTATGCAGGTTGTTACATACAGTG 59.358 40.000 9.88 0.00 45.95 3.66
5823 8837 6.038936 GGTTGTTACATACAGTGTGTTTTCCT 59.961 38.462 8.41 0.00 42.24 3.36
5892 10350 5.872070 CGTACCCCATGCAAATATTTTGTTT 59.128 36.000 0.00 0.00 0.00 2.83
5897 10355 5.354792 CCCATGCAAATATTTTGTTTCCCTG 59.645 40.000 0.00 0.00 0.00 4.45
5902 10360 6.705381 TGCAAATATTTTGTTTCCCTGTCTTG 59.295 34.615 0.00 0.00 0.00 3.02
5911 10372 7.595819 TTGTTTCCCTGTCTTGTTCATAAAT 57.404 32.000 0.00 0.00 0.00 1.40
5942 10403 7.642586 GCTTATACTTTGTGACGTGTTCTTTTT 59.357 33.333 0.00 0.00 0.00 1.94
5972 10436 1.508632 TGTTTACTGGAGACTTGCGC 58.491 50.000 0.00 0.00 0.00 6.09
5973 10437 1.202592 TGTTTACTGGAGACTTGCGCA 60.203 47.619 5.66 5.66 0.00 6.09
6030 10494 3.182572 CGACGATACTTGCTATTCCTTGC 59.817 47.826 0.00 0.00 0.00 4.01
6046 10510 0.593128 TTGCGCTTCTTTCTTGGCTC 59.407 50.000 9.73 0.00 0.00 4.70
6053 10517 0.987294 TCTTTCTTGGCTCAGAGGGG 59.013 55.000 0.00 0.00 0.00 4.79
6059 10523 0.827507 TTGGCTCAGAGGGGCAAAAC 60.828 55.000 3.17 0.00 44.18 2.43
6097 10562 7.675962 AAAAAGGGGAAAGTTACAAACAAAC 57.324 32.000 0.00 0.00 0.00 2.93
6098 10563 6.361768 AAAGGGGAAAGTTACAAACAAACA 57.638 33.333 0.00 0.00 0.00 2.83
6099 10564 6.361768 AAGGGGAAAGTTACAAACAAACAA 57.638 33.333 0.00 0.00 0.00 2.83
6100 10565 6.361768 AGGGGAAAGTTACAAACAAACAAA 57.638 33.333 0.00 0.00 0.00 2.83
6129 10595 2.279659 CACGCACTTTTTGTTGAGCTTG 59.720 45.455 0.00 0.00 0.00 4.01
6221 10688 9.583765 AAGATCTTTTATAGTTCTACGTGTTCC 57.416 33.333 0.88 0.00 32.86 3.62
6249 10793 0.608130 TCGCTTAAGAGGAGCTTGCA 59.392 50.000 6.67 0.00 37.42 4.08
6254 10798 4.616835 CGCTTAAGAGGAGCTTGCATTTTT 60.617 41.667 6.67 0.00 37.42 1.94
6369 10981 4.497291 TTGTAACCCCTGGTGTCATATC 57.503 45.455 0.00 0.00 35.34 1.63
6395 11009 7.420002 GCTTCAAGCAAAGAAAATCCAAAAAT 58.580 30.769 3.89 0.00 41.89 1.82
6494 11113 2.125225 GGGAGGTGGGGGAACTCT 59.875 66.667 0.00 0.00 0.00 3.24
6514 11133 7.789202 ACTCTGCCTATGATACTGATGTTAT 57.211 36.000 0.00 0.00 0.00 1.89
6666 11288 8.806429 TCCTATTGCTCATTTCTGTTTTGATA 57.194 30.769 0.00 0.00 0.00 2.15
6699 11323 3.264947 ACATTGACACACATCTCCATCG 58.735 45.455 0.00 0.00 0.00 3.84
6702 11326 3.503827 TGACACACATCTCCATCGTAC 57.496 47.619 0.00 0.00 0.00 3.67
6765 11391 7.251704 AGTCTGTCATTTGTACAGTTTTGAG 57.748 36.000 0.00 0.00 43.88 3.02
6766 11392 6.823689 AGTCTGTCATTTGTACAGTTTTGAGT 59.176 34.615 0.00 0.00 43.88 3.41
6767 11393 6.907212 GTCTGTCATTTGTACAGTTTTGAGTG 59.093 38.462 0.00 0.00 43.88 3.51
6768 11394 6.597672 TCTGTCATTTGTACAGTTTTGAGTGT 59.402 34.615 0.00 0.00 43.88 3.55
6769 11395 6.550843 TGTCATTTGTACAGTTTTGAGTGTG 58.449 36.000 0.00 0.00 0.00 3.82
6770 11396 6.150307 TGTCATTTGTACAGTTTTGAGTGTGT 59.850 34.615 0.00 0.00 0.00 3.72
6771 11397 7.334671 TGTCATTTGTACAGTTTTGAGTGTGTA 59.665 33.333 0.00 0.00 0.00 2.90
6772 11398 8.342634 GTCATTTGTACAGTTTTGAGTGTGTAT 58.657 33.333 0.00 0.00 0.00 2.29
6773 11399 8.898761 TCATTTGTACAGTTTTGAGTGTGTATT 58.101 29.630 0.00 0.00 0.00 1.89
6774 11400 9.515020 CATTTGTACAGTTTTGAGTGTGTATTT 57.485 29.630 0.00 0.00 0.00 1.40
6776 11402 8.903570 TTGTACAGTTTTGAGTGTGTATTTTG 57.096 30.769 0.00 0.00 0.00 2.44
6777 11403 6.970043 TGTACAGTTTTGAGTGTGTATTTTGC 59.030 34.615 0.00 0.00 0.00 3.68
6778 11404 5.960113 ACAGTTTTGAGTGTGTATTTTGCA 58.040 33.333 0.00 0.00 0.00 4.08
6779 11405 6.035843 ACAGTTTTGAGTGTGTATTTTGCAG 58.964 36.000 0.00 0.00 0.00 4.41
6780 11406 5.459762 CAGTTTTGAGTGTGTATTTTGCAGG 59.540 40.000 0.00 0.00 0.00 4.85
6781 11407 5.359576 AGTTTTGAGTGTGTATTTTGCAGGA 59.640 36.000 0.00 0.00 0.00 3.86
6782 11408 6.040842 AGTTTTGAGTGTGTATTTTGCAGGAT 59.959 34.615 0.00 0.00 0.00 3.24
6783 11409 6.403866 TTTGAGTGTGTATTTTGCAGGATT 57.596 33.333 0.00 0.00 0.00 3.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.745087 CGTGATGCCAGCCTATTTGTT 59.255 47.619 0.00 0.00 0.00 2.83
2 3 1.667236 TCGTGATGCCAGCCTATTTG 58.333 50.000 0.00 0.00 0.00 2.32
3 4 2.224606 CATCGTGATGCCAGCCTATTT 58.775 47.619 0.00 0.00 31.39 1.40
35 2423 0.586256 CACATTTGCATACGACGGCG 60.586 55.000 10.39 10.39 44.79 6.46
38 2426 1.388768 ACGACACATTTGCATACGACG 59.611 47.619 0.00 0.00 0.00 5.12
46 2434 3.434637 ACAAACAAGACGACACATTTGC 58.565 40.909 0.00 0.00 31.69 3.68
53 2441 0.736053 GCCCAACAAACAAGACGACA 59.264 50.000 0.00 0.00 0.00 4.35
54 2442 0.030235 GGCCCAACAAACAAGACGAC 59.970 55.000 0.00 0.00 0.00 4.34
60 2448 0.394488 TCTGACGGCCCAACAAACAA 60.394 50.000 0.00 0.00 0.00 2.83
75 2463 3.808728 AGTGCAGCTTTAGTTTGTCTGA 58.191 40.909 0.00 0.00 0.00 3.27
79 2467 3.084070 GCAAGTGCAGCTTTAGTTTGT 57.916 42.857 0.00 0.00 41.59 2.83
93 2481 8.080417 CCCAGATCAGAAAAATATATGCAAGTG 58.920 37.037 0.00 0.00 0.00 3.16
114 2508 3.327757 AGCGCTCCAATAATTATCCCAGA 59.672 43.478 2.64 0.00 0.00 3.86
117 2511 6.404734 CCATAAAGCGCTCCAATAATTATCCC 60.405 42.308 12.06 0.00 0.00 3.85
134 2528 8.662781 TTACTCAGTAATCATGACCATAAAGC 57.337 34.615 0.00 0.00 0.00 3.51
139 2533 7.012704 GTGCAATTACTCAGTAATCATGACCAT 59.987 37.037 10.61 0.00 37.69 3.55
144 2538 6.684131 CGTTGTGCAATTACTCAGTAATCATG 59.316 38.462 10.61 7.58 37.69 3.07
150 2544 3.997762 ACCGTTGTGCAATTACTCAGTA 58.002 40.909 0.00 0.00 0.00 2.74
153 2547 2.287308 GCAACCGTTGTGCAATTACTCA 60.287 45.455 12.77 0.00 0.00 3.41
161 2555 0.737715 GGTTTTGCAACCGTTGTGCA 60.738 50.000 12.77 3.48 43.40 4.57
174 2568 4.060205 CCTTTCATGAGGCTTTGGTTTTG 58.940 43.478 0.00 0.00 0.00 2.44
175 2569 3.071457 CCCTTTCATGAGGCTTTGGTTTT 59.929 43.478 0.00 0.00 35.37 2.43
185 2579 2.749621 CCTTTCGTTCCCTTTCATGAGG 59.250 50.000 0.00 0.00 36.52 3.86
187 2581 2.373836 TCCCTTTCGTTCCCTTTCATGA 59.626 45.455 0.00 0.00 0.00 3.07
189 2583 3.739401 ATCCCTTTCGTTCCCTTTCAT 57.261 42.857 0.00 0.00 0.00 2.57
191 2585 4.202020 GCATAATCCCTTTCGTTCCCTTTC 60.202 45.833 0.00 0.00 0.00 2.62
202 2596 7.051623 TGATAACTAACGTGCATAATCCCTTT 58.948 34.615 0.00 0.00 0.00 3.11
214 2608 5.395778 GCACTACTCGATGATAACTAACGTG 59.604 44.000 0.00 0.00 0.00 4.49
217 2611 6.496571 AGTGCACTACTCGATGATAACTAAC 58.503 40.000 20.16 0.00 33.17 2.34
218 2612 6.694877 AGTGCACTACTCGATGATAACTAA 57.305 37.500 20.16 0.00 33.17 2.24
220 2614 6.694877 TTAGTGCACTACTCGATGATAACT 57.305 37.500 26.02 0.00 40.89 2.24
224 2618 6.039829 TCTGAATTAGTGCACTACTCGATGAT 59.960 38.462 26.02 12.17 40.89 2.45
237 2631 2.605366 GCGAAGACCTCTGAATTAGTGC 59.395 50.000 0.00 0.00 0.00 4.40
238 2632 2.854777 CGCGAAGACCTCTGAATTAGTG 59.145 50.000 0.00 0.00 0.00 2.74
239 2633 2.735762 GCGCGAAGACCTCTGAATTAGT 60.736 50.000 12.10 0.00 0.00 2.24
241 2635 1.470979 GGCGCGAAGACCTCTGAATTA 60.471 52.381 12.10 0.00 0.00 1.40
243 2637 1.153549 GGCGCGAAGACCTCTGAAT 60.154 57.895 12.10 0.00 0.00 2.57
244 2638 2.261671 GGCGCGAAGACCTCTGAA 59.738 61.111 12.10 0.00 0.00 3.02
254 2648 0.464036 ATTCTGTATGAGGGCGCGAA 59.536 50.000 12.10 0.00 0.00 4.70
270 2664 5.801947 GCAATTGTGTGTCTAATGACCATTC 59.198 40.000 7.40 0.00 42.28 2.67
292 2686 3.305403 CGTCTCCACTCTTTGTTCTAGCA 60.305 47.826 0.00 0.00 0.00 3.49
295 2689 4.022242 CCTTCGTCTCCACTCTTTGTTCTA 60.022 45.833 0.00 0.00 0.00 2.10
297 2691 3.060602 CCTTCGTCTCCACTCTTTGTTC 58.939 50.000 0.00 0.00 0.00 3.18
299 2693 2.317040 TCCTTCGTCTCCACTCTTTGT 58.683 47.619 0.00 0.00 0.00 2.83
323 2717 3.395941 TCTTCCTTCAGCTCCCTCTTTTT 59.604 43.478 0.00 0.00 0.00 1.94
325 2719 2.571202 CTCTTCCTTCAGCTCCCTCTTT 59.429 50.000 0.00 0.00 0.00 2.52
326 2720 2.187100 CTCTTCCTTCAGCTCCCTCTT 58.813 52.381 0.00 0.00 0.00 2.85
331 2725 1.859302 TCCTCTCTTCCTTCAGCTCC 58.141 55.000 0.00 0.00 0.00 4.70
345 2739 1.490490 TGTGTGGCTCAAACTTCCTCT 59.510 47.619 0.00 0.00 0.00 3.69
346 2740 1.876156 CTGTGTGGCTCAAACTTCCTC 59.124 52.381 0.00 0.00 0.00 3.71
349 2743 4.893424 TTTACTGTGTGGCTCAAACTTC 57.107 40.909 0.00 0.00 0.00 3.01
351 2745 5.359576 TGAATTTTACTGTGTGGCTCAAACT 59.640 36.000 0.00 0.00 0.00 2.66
352 2746 5.587289 TGAATTTTACTGTGTGGCTCAAAC 58.413 37.500 0.00 0.00 0.00 2.93
355 2749 3.820467 CCTGAATTTTACTGTGTGGCTCA 59.180 43.478 0.00 0.00 0.00 4.26
356 2750 4.072131 TCCTGAATTTTACTGTGTGGCTC 58.928 43.478 0.00 0.00 0.00 4.70
357 2751 4.098914 TCCTGAATTTTACTGTGTGGCT 57.901 40.909 0.00 0.00 0.00 4.75
389 3076 3.374402 ACGCACTCCTCCCACTCG 61.374 66.667 0.00 0.00 0.00 4.18
413 3102 9.812347 TTGCCCACATGATAATAATAGAATTCT 57.188 29.630 13.56 13.56 0.00 2.40
441 3130 4.608170 TTTCCCTTTCCCTGCAAGATAT 57.392 40.909 0.00 0.00 34.07 1.63
447 3136 5.337169 CGATAAATTTTTCCCTTTCCCTGCA 60.337 40.000 0.00 0.00 0.00 4.41
452 3141 9.863845 TTTGATACGATAAATTTTTCCCTTTCC 57.136 29.630 0.00 0.00 0.00 3.13
506 3195 9.770097 TTGCATCAAAATTCCACATAAAAAGTA 57.230 25.926 0.00 0.00 0.00 2.24
508 3197 9.601971 CTTTGCATCAAAATTCCACATAAAAAG 57.398 29.630 0.00 0.00 32.75 2.27
599 3289 5.813080 AAAATAAATCCACGTCTGCTACC 57.187 39.130 0.00 0.00 0.00 3.18
604 3294 6.038161 TGCCAGATAAAATAAATCCACGTCTG 59.962 38.462 0.00 0.00 0.00 3.51
627 3317 7.486802 TCTTTTACCTGTTAGTTGTTACTGC 57.513 36.000 0.00 0.00 35.78 4.40
681 3374 3.813166 AGTTAACACCCAACGACTGATTG 59.187 43.478 8.61 0.00 0.00 2.67
709 3402 3.772572 GGTTAGGGCCAAAAACCATACAT 59.227 43.478 23.08 0.00 41.89 2.29
717 3410 1.957877 CGACTTGGTTAGGGCCAAAAA 59.042 47.619 6.18 0.00 46.59 1.94
744 3437 9.341899 GTGCAAAACTTCTGTAATTAATGTAGG 57.658 33.333 0.00 0.00 0.00 3.18
754 3447 6.150307 TGTCTCTTTGTGCAAAACTTCTGTAA 59.850 34.615 0.00 0.00 0.00 2.41
755 3448 5.645929 TGTCTCTTTGTGCAAAACTTCTGTA 59.354 36.000 0.00 0.00 0.00 2.74
757 3450 4.985413 TGTCTCTTTGTGCAAAACTTCTG 58.015 39.130 0.00 0.00 0.00 3.02
758 3451 5.183904 AGTTGTCTCTTTGTGCAAAACTTCT 59.816 36.000 0.00 0.00 0.00 2.85
759 3452 5.287035 CAGTTGTCTCTTTGTGCAAAACTTC 59.713 40.000 0.00 0.00 0.00 3.01
760 3453 5.163513 CAGTTGTCTCTTTGTGCAAAACTT 58.836 37.500 0.00 0.00 0.00 2.66
765 3463 1.405105 GGCAGTTGTCTCTTTGTGCAA 59.595 47.619 0.00 0.00 32.42 4.08
781 3479 4.783621 TGCAGGCTTAGCGGGCAG 62.784 66.667 15.49 0.00 34.42 4.85
785 3483 2.401766 CCAAGTGCAGGCTTAGCGG 61.402 63.158 0.00 0.00 33.85 5.52
788 3486 3.133721 AGATACTCCAAGTGCAGGCTTAG 59.866 47.826 0.00 0.00 0.00 2.18
795 3493 5.222079 TGTAAACAGATACTCCAAGTGCA 57.778 39.130 0.00 0.00 0.00 4.57
798 3496 6.681729 TTCCTGTAAACAGATACTCCAAGT 57.318 37.500 11.69 0.00 46.59 3.16
806 3504 9.923143 CGGTGATAATATTCCTGTAAACAGATA 57.077 33.333 11.69 3.26 46.59 1.98
807 3505 7.387948 GCGGTGATAATATTCCTGTAAACAGAT 59.612 37.037 11.69 1.10 46.59 2.90
808 3506 6.704493 GCGGTGATAATATTCCTGTAAACAGA 59.296 38.462 11.69 0.00 46.59 3.41
810 3508 6.259167 GTGCGGTGATAATATTCCTGTAAACA 59.741 38.462 0.00 0.00 0.00 2.83
811 3509 6.563381 CGTGCGGTGATAATATTCCTGTAAAC 60.563 42.308 0.00 0.00 0.00 2.01
814 3512 4.552355 CGTGCGGTGATAATATTCCTGTA 58.448 43.478 0.00 0.00 0.00 2.74
815 3513 3.390135 CGTGCGGTGATAATATTCCTGT 58.610 45.455 0.00 0.00 0.00 4.00
816 3514 2.157668 GCGTGCGGTGATAATATTCCTG 59.842 50.000 0.00 0.00 0.00 3.86
817 3515 2.037251 AGCGTGCGGTGATAATATTCCT 59.963 45.455 0.00 0.00 0.00 3.36
876 3633 2.192861 CGGCCAGCCAAGTTCACAA 61.193 57.895 9.78 0.00 35.37 3.33
926 3684 2.223745 GGTTGATGTACGTTTGGGTGT 58.776 47.619 0.00 0.00 0.00 4.16
951 3709 4.021544 TGTGTTGTTTGATTGATAAGGGCC 60.022 41.667 0.00 0.00 0.00 5.80
958 3716 5.728471 TGTTTGGTGTGTTGTTTGATTGAT 58.272 33.333 0.00 0.00 0.00 2.57
1060 3822 2.289945 CCTTCTGCAGCTTGTACTCCTT 60.290 50.000 9.47 0.00 0.00 3.36
1122 3884 0.964358 GGAGGACAGCTTGCATGCTT 60.964 55.000 23.35 14.90 41.98 3.91
1215 3977 4.642885 ACAACGTCTTCCATTTTGAAGGAA 59.357 37.500 0.00 0.00 41.67 3.36
1224 3986 3.945285 ACTTGTCAACAACGTCTTCCATT 59.055 39.130 0.00 0.00 0.00 3.16
1236 3998 3.916359 TGTACCAGGAACTTGTCAACA 57.084 42.857 0.00 0.00 35.37 3.33
1254 4016 1.544246 TGAGAACCGTCATCGACATGT 59.456 47.619 0.00 0.00 39.71 3.21
1283 4045 2.531508 CGTTTGAGCTTGTTCAACTTGC 59.468 45.455 0.00 0.00 36.84 4.01
1287 4049 1.065551 AGCCGTTTGAGCTTGTTCAAC 59.934 47.619 0.00 0.00 37.24 3.18
1353 4115 2.477754 AGTGATCGCATGTGCAATATCG 59.522 45.455 9.33 0.00 42.21 2.92
1363 4125 2.674357 TGTTGATGTCAGTGATCGCATG 59.326 45.455 9.33 4.37 0.00 4.06
1373 4135 4.556942 TTGACTTGCTTGTTGATGTCAG 57.443 40.909 0.00 0.00 36.12 3.51
1374 4136 4.398988 ACTTTGACTTGCTTGTTGATGTCA 59.601 37.500 0.00 0.00 33.41 3.58
1393 4155 1.956477 ACGCCTTTCAGCAATCACTTT 59.044 42.857 0.00 0.00 0.00 2.66
1397 4159 1.171549 TGCACGCCTTTCAGCAATCA 61.172 50.000 0.00 0.00 33.48 2.57
1399 4161 0.038892 CTTGCACGCCTTTCAGCAAT 60.039 50.000 0.00 0.00 44.85 3.56
1458 4220 3.369261 CCTGAAGGAGAGGATTGACTGTG 60.369 52.174 0.00 0.00 37.39 3.66
1495 4260 0.251354 ATGCCAACGAGCTCTGTCAT 59.749 50.000 12.85 2.80 0.00 3.06
1576 4341 7.253422 ACAACAGAGACAATCTTCAACTTTTG 58.747 34.615 0.00 0.00 35.47 2.44
1662 4427 1.106285 AAGCCCTGCAATCGAAATCC 58.894 50.000 0.00 0.00 0.00 3.01
1712 4477 9.143631 CAATAAGGATGTCCATCAAAACTTTTC 57.856 33.333 9.34 0.00 39.54 2.29
1735 4501 4.229123 ACTTCCTCCCACATCAAGATCAAT 59.771 41.667 0.00 0.00 0.00 2.57
1767 4539 2.880890 GAGCTGTGTTTCATCCAACAGT 59.119 45.455 0.00 0.00 41.65 3.55
1815 4587 7.013083 AGCTGAATATGAGCATACCTTTTTCTG 59.987 37.037 9.15 0.00 39.05 3.02
1836 4608 3.435275 TCTTTAAGCAGGAGAGAGCTGA 58.565 45.455 0.00 0.00 41.70 4.26
1837 4609 3.883830 TCTTTAAGCAGGAGAGAGCTG 57.116 47.619 0.00 0.00 41.70 4.24
1839 4612 3.118445 ACCATCTTTAAGCAGGAGAGAGC 60.118 47.826 8.97 0.00 0.00 4.09
1880 4653 5.054477 CACATTATTCCCAACCTACCGTAG 58.946 45.833 0.00 0.00 0.00 3.51
1881 4654 4.470664 ACACATTATTCCCAACCTACCGTA 59.529 41.667 0.00 0.00 0.00 4.02
1883 4656 3.881220 ACACATTATTCCCAACCTACCG 58.119 45.455 0.00 0.00 0.00 4.02
1906 4680 7.993183 ACATCGGGAGTAACTTCATGATTAATT 59.007 33.333 0.00 0.00 0.00 1.40
1908 4682 6.884832 ACATCGGGAGTAACTTCATGATTAA 58.115 36.000 0.00 0.00 0.00 1.40
1909 4683 6.479972 ACATCGGGAGTAACTTCATGATTA 57.520 37.500 0.00 0.00 0.00 1.75
1913 4687 3.871594 GGAACATCGGGAGTAACTTCATG 59.128 47.826 0.00 0.00 0.00 3.07
1914 4688 3.430374 CGGAACATCGGGAGTAACTTCAT 60.430 47.826 0.00 0.00 0.00 2.57
1916 4690 2.165030 TCGGAACATCGGGAGTAACTTC 59.835 50.000 0.00 0.00 0.00 3.01
1928 4702 3.681897 GGCATACATCTGATCGGAACATC 59.318 47.826 8.65 0.00 0.00 3.06
1929 4703 3.071457 TGGCATACATCTGATCGGAACAT 59.929 43.478 8.65 0.00 0.00 2.71
1930 4704 2.433970 TGGCATACATCTGATCGGAACA 59.566 45.455 8.65 0.00 0.00 3.18
1931 4705 3.062763 CTGGCATACATCTGATCGGAAC 58.937 50.000 8.65 0.00 0.00 3.62
1932 4706 2.700371 ACTGGCATACATCTGATCGGAA 59.300 45.455 8.65 0.00 0.00 4.30
1933 4707 2.319844 ACTGGCATACATCTGATCGGA 58.680 47.619 6.72 6.72 0.00 4.55
1934 4708 2.827800 ACTGGCATACATCTGATCGG 57.172 50.000 0.00 0.00 0.00 4.18
1935 4709 8.484641 AATATTAACTGGCATACATCTGATCG 57.515 34.615 0.00 0.00 0.00 3.69
1938 4712 8.352201 GCAAAATATTAACTGGCATACATCTGA 58.648 33.333 0.00 0.00 0.00 3.27
1939 4713 8.136800 TGCAAAATATTAACTGGCATACATCTG 58.863 33.333 0.00 0.00 0.00 2.90
1940 4714 8.236585 TGCAAAATATTAACTGGCATACATCT 57.763 30.769 0.00 0.00 0.00 2.90
1945 4719 9.573166 AGAGTATGCAAAATATTAACTGGCATA 57.427 29.630 4.28 4.28 40.57 3.14
1946 4720 8.469309 AGAGTATGCAAAATATTAACTGGCAT 57.531 30.769 5.91 5.91 42.50 4.40
1947 4721 7.775093 AGAGAGTATGCAAAATATTAACTGGCA 59.225 33.333 0.00 0.00 0.00 4.92
1948 4722 8.072567 CAGAGAGTATGCAAAATATTAACTGGC 58.927 37.037 0.00 0.00 0.00 4.85
1949 4723 9.330063 TCAGAGAGTATGCAAAATATTAACTGG 57.670 33.333 0.00 0.00 0.00 4.00
1954 4728 9.494271 GGTCATCAGAGAGTATGCAAAATATTA 57.506 33.333 0.00 0.00 0.00 0.98
1955 4729 7.994911 TGGTCATCAGAGAGTATGCAAAATATT 59.005 33.333 0.00 0.00 0.00 1.28
1956 4730 7.512130 TGGTCATCAGAGAGTATGCAAAATAT 58.488 34.615 0.00 0.00 0.00 1.28
1957 4731 6.888105 TGGTCATCAGAGAGTATGCAAAATA 58.112 36.000 0.00 0.00 0.00 1.40
1958 4732 5.748402 TGGTCATCAGAGAGTATGCAAAAT 58.252 37.500 0.00 0.00 0.00 1.82
1959 4733 5.164620 TGGTCATCAGAGAGTATGCAAAA 57.835 39.130 0.00 0.00 0.00 2.44
1960 4734 4.763073 CTGGTCATCAGAGAGTATGCAAA 58.237 43.478 0.00 0.00 46.18 3.68
1961 4735 3.431346 GCTGGTCATCAGAGAGTATGCAA 60.431 47.826 0.00 0.00 46.18 4.08
1962 4736 2.102084 GCTGGTCATCAGAGAGTATGCA 59.898 50.000 0.00 0.00 46.18 3.96
1963 4737 2.364970 AGCTGGTCATCAGAGAGTATGC 59.635 50.000 0.00 0.00 46.18 3.14
1964 4738 4.669206 AAGCTGGTCATCAGAGAGTATG 57.331 45.455 0.00 0.00 46.18 2.39
1965 4739 4.713814 TCAAAGCTGGTCATCAGAGAGTAT 59.286 41.667 0.00 0.00 46.18 2.12
1966 4740 4.081972 GTCAAAGCTGGTCATCAGAGAGTA 60.082 45.833 0.00 0.00 46.18 2.59
1967 4741 2.902486 TCAAAGCTGGTCATCAGAGAGT 59.098 45.455 0.00 0.00 46.18 3.24
1968 4742 3.260740 GTCAAAGCTGGTCATCAGAGAG 58.739 50.000 0.00 0.00 46.18 3.20
1969 4743 2.353109 CGTCAAAGCTGGTCATCAGAGA 60.353 50.000 0.00 0.00 46.18 3.10
1970 4744 1.998315 CGTCAAAGCTGGTCATCAGAG 59.002 52.381 0.00 0.00 46.18 3.35
1971 4745 1.338105 CCGTCAAAGCTGGTCATCAGA 60.338 52.381 0.00 0.00 46.18 3.27
1972 4746 1.081892 CCGTCAAAGCTGGTCATCAG 58.918 55.000 0.00 0.00 46.03 2.90
1973 4747 0.396435 ACCGTCAAAGCTGGTCATCA 59.604 50.000 0.00 0.00 0.00 3.07
1974 4748 1.523758 AACCGTCAAAGCTGGTCATC 58.476 50.000 0.00 0.00 34.11 2.92
1975 4749 2.851263 TAACCGTCAAAGCTGGTCAT 57.149 45.000 0.00 0.00 34.11 3.06
1976 4750 2.623878 TTAACCGTCAAAGCTGGTCA 57.376 45.000 0.00 0.00 34.11 4.02
1977 4751 4.499037 AAATTAACCGTCAAAGCTGGTC 57.501 40.909 0.00 0.00 34.11 4.02
1978 4752 4.929819 AAAATTAACCGTCAAAGCTGGT 57.070 36.364 0.00 0.00 37.68 4.00
2000 4774 9.647797 ACGATTACTCACTTACATGTTAATGAA 57.352 29.630 2.30 0.00 37.24 2.57
2041 4815 9.935682 GATTACGCTATCAGATTTTTCATGAAA 57.064 29.630 16.91 16.91 0.00 2.69
2042 4816 8.559536 GGATTACGCTATCAGATTTTTCATGAA 58.440 33.333 3.38 3.38 0.00 2.57
2043 4817 7.173218 GGGATTACGCTATCAGATTTTTCATGA 59.827 37.037 0.00 0.00 0.00 3.07
2044 4818 7.173907 AGGGATTACGCTATCAGATTTTTCATG 59.826 37.037 0.00 0.00 37.53 3.07
2045 4819 7.227156 AGGGATTACGCTATCAGATTTTTCAT 58.773 34.615 0.00 0.00 37.53 2.57
2046 4820 6.591935 AGGGATTACGCTATCAGATTTTTCA 58.408 36.000 0.00 0.00 37.53 2.69
2047 4821 7.117956 GGTAGGGATTACGCTATCAGATTTTTC 59.882 40.741 0.00 0.00 42.04 2.29
2048 4822 6.935208 GGTAGGGATTACGCTATCAGATTTTT 59.065 38.462 0.00 0.00 42.04 1.94
2049 4823 6.042781 TGGTAGGGATTACGCTATCAGATTTT 59.957 38.462 0.00 0.00 44.06 1.82
2050 4824 5.542635 TGGTAGGGATTACGCTATCAGATTT 59.457 40.000 0.00 0.00 44.06 2.17
2051 4825 5.084519 TGGTAGGGATTACGCTATCAGATT 58.915 41.667 0.00 0.00 44.06 2.40
2052 4826 4.673968 TGGTAGGGATTACGCTATCAGAT 58.326 43.478 0.00 0.00 44.06 2.90
2053 4827 4.108501 TGGTAGGGATTACGCTATCAGA 57.891 45.455 0.00 0.00 44.06 3.27
2056 4830 6.710597 TCATATGGTAGGGATTACGCTATC 57.289 41.667 2.13 0.00 42.04 2.08
2057 4831 7.676683 ATTCATATGGTAGGGATTACGCTAT 57.323 36.000 2.13 0.00 42.04 2.97
2058 4832 7.179516 TCAATTCATATGGTAGGGATTACGCTA 59.820 37.037 2.13 0.00 39.88 4.26
2059 4833 6.013725 TCAATTCATATGGTAGGGATTACGCT 60.014 38.462 2.13 0.00 41.97 5.07
2060 4834 6.170506 TCAATTCATATGGTAGGGATTACGC 58.829 40.000 2.13 0.00 32.79 4.42
2061 4835 8.615878 TTTCAATTCATATGGTAGGGATTACG 57.384 34.615 2.13 0.00 32.79 3.18
2119 4893 9.030452 AGTCAAACATCTCTATTCTCTAACACT 57.970 33.333 0.00 0.00 0.00 3.55
2158 4932 6.109156 TCAGCCTTACACTTGATTACTTCA 57.891 37.500 0.00 0.00 0.00 3.02
2175 4949 4.655649 TGACATTATGTACTCCATCAGCCT 59.344 41.667 0.00 0.00 34.86 4.58
2192 4966 9.678260 ATCAGCTACTCTAAAATCTTTGACATT 57.322 29.630 0.00 0.00 0.00 2.71
2195 4969 8.608317 GGAATCAGCTACTCTAAAATCTTTGAC 58.392 37.037 0.00 0.00 0.00 3.18
2196 4970 8.543774 AGGAATCAGCTACTCTAAAATCTTTGA 58.456 33.333 0.00 0.00 0.00 2.69
2197 4971 8.729805 AGGAATCAGCTACTCTAAAATCTTTG 57.270 34.615 0.00 0.00 0.00 2.77
2198 4972 9.746457 AAAGGAATCAGCTACTCTAAAATCTTT 57.254 29.630 0.00 0.00 0.00 2.52
2200 4974 8.325046 ACAAAGGAATCAGCTACTCTAAAATCT 58.675 33.333 0.00 0.00 0.00 2.40
2201 4975 8.394121 CACAAAGGAATCAGCTACTCTAAAATC 58.606 37.037 0.00 0.00 0.00 2.17
2202 4976 7.885399 ACACAAAGGAATCAGCTACTCTAAAAT 59.115 33.333 0.00 0.00 0.00 1.82
2205 4979 6.014584 TGACACAAAGGAATCAGCTACTCTAA 60.015 38.462 0.00 0.00 0.00 2.10
2206 4980 5.480422 TGACACAAAGGAATCAGCTACTCTA 59.520 40.000 0.00 0.00 0.00 2.43
2214 4992 5.862924 ATTACGTGACACAAAGGAATCAG 57.137 39.130 6.37 0.00 0.00 2.90
2267 5046 5.545063 TCTAAGACATAATGCATCGGGAA 57.455 39.130 0.00 0.00 0.00 3.97
2369 5155 2.475200 AAGCAAGACAACTCAAACGC 57.525 45.000 0.00 0.00 0.00 4.84
2370 5156 3.547468 CCAAAAGCAAGACAACTCAAACG 59.453 43.478 0.00 0.00 0.00 3.60
2371 5157 3.306973 GCCAAAAGCAAGACAACTCAAAC 59.693 43.478 0.00 0.00 42.97 2.93
2372 5158 3.520569 GCCAAAAGCAAGACAACTCAAA 58.479 40.909 0.00 0.00 42.97 2.69
2387 5173 6.530120 TCTGATACAGTTCTTAGTGCCAAAA 58.470 36.000 0.00 0.00 32.61 2.44
2402 5188 9.149225 GAGTTGCCATATCTTAATCTGATACAG 57.851 37.037 0.00 0.00 30.38 2.74
2408 5194 7.669427 AGAGAGAGTTGCCATATCTTAATCTG 58.331 38.462 0.00 0.00 0.00 2.90
2432 5218 8.072567 GCAATTATGGTTGTAGATGCTCTAAAG 58.927 37.037 0.00 0.00 29.58 1.85
2434 5220 7.282585 AGCAATTATGGTTGTAGATGCTCTAA 58.717 34.615 0.00 0.00 38.42 2.10
2436 5222 5.688807 AGCAATTATGGTTGTAGATGCTCT 58.311 37.500 0.00 0.00 38.42 4.09
2448 5234 5.068591 GGGAACCGAATTAAGCAATTATGGT 59.931 40.000 0.00 0.00 41.39 3.55
2471 5257 1.450211 GGACCGGTGGACATATGGG 59.550 63.158 14.63 0.00 0.00 4.00
2472 5258 1.069090 CGGACCGGTGGACATATGG 59.931 63.158 14.63 0.00 0.00 2.74
2474 5260 0.906775 AAACGGACCGGTGGACATAT 59.093 50.000 14.63 0.00 0.00 1.78
2502 5313 3.194062 CGGTTGTTTTGCATGGAAAGTT 58.806 40.909 12.38 0.00 0.00 2.66
2510 5321 1.340889 AGATGTGCGGTTGTTTTGCAT 59.659 42.857 0.00 0.00 41.23 3.96
2523 5334 7.389884 ACAATATGAGGATAATGTGAGATGTGC 59.610 37.037 0.00 0.00 0.00 4.57
2527 5338 8.211030 TGGACAATATGAGGATAATGTGAGAT 57.789 34.615 0.00 0.00 0.00 2.75
2552 5363 2.191400 ACCACTCATATGCTGGTGACT 58.809 47.619 19.04 6.11 36.90 3.41
2557 5368 1.764723 TCTCCACCACTCATATGCTGG 59.235 52.381 14.63 14.63 0.00 4.85
2558 5369 2.224233 CCTCTCCACCACTCATATGCTG 60.224 54.545 0.00 0.00 0.00 4.41
2559 5370 2.045524 CCTCTCCACCACTCATATGCT 58.954 52.381 0.00 0.00 0.00 3.79
2560 5371 2.042464 TCCTCTCCACCACTCATATGC 58.958 52.381 0.00 0.00 0.00 3.14
2561 5372 3.963374 TCTTCCTCTCCACCACTCATATG 59.037 47.826 0.00 0.00 0.00 1.78
2562 5373 4.271807 TCTTCCTCTCCACCACTCATAT 57.728 45.455 0.00 0.00 0.00 1.78
2563 5374 3.757947 TCTTCCTCTCCACCACTCATA 57.242 47.619 0.00 0.00 0.00 2.15
2564 5375 2.630889 TCTTCCTCTCCACCACTCAT 57.369 50.000 0.00 0.00 0.00 2.90
2565 5376 2.398754 TTCTTCCTCTCCACCACTCA 57.601 50.000 0.00 0.00 0.00 3.41
2566 5377 2.834549 TCATTCTTCCTCTCCACCACTC 59.165 50.000 0.00 0.00 0.00 3.51
2567 5378 2.836981 CTCATTCTTCCTCTCCACCACT 59.163 50.000 0.00 0.00 0.00 4.00
2568 5379 2.834549 TCTCATTCTTCCTCTCCACCAC 59.165 50.000 0.00 0.00 0.00 4.16
2569 5380 3.190383 TCTCATTCTTCCTCTCCACCA 57.810 47.619 0.00 0.00 0.00 4.17
2570 5381 4.559862 TTTCTCATTCTTCCTCTCCACC 57.440 45.455 0.00 0.00 0.00 4.61
2571 5382 5.799213 TCTTTTCTCATTCTTCCTCTCCAC 58.201 41.667 0.00 0.00 0.00 4.02
2572 5383 6.439636 TTCTTTTCTCATTCTTCCTCTCCA 57.560 37.500 0.00 0.00 0.00 3.86
2573 5384 7.164803 TCTTTCTTTTCTCATTCTTCCTCTCC 58.835 38.462 0.00 0.00 0.00 3.71
2574 5385 8.614469 TTCTTTCTTTTCTCATTCTTCCTCTC 57.386 34.615 0.00 0.00 0.00 3.20
2575 5386 8.986929 TTTCTTTCTTTTCTCATTCTTCCTCT 57.013 30.769 0.00 0.00 0.00 3.69
2591 5402 9.844257 TTTCTCTCTCTTCATTCTTTCTTTCTT 57.156 29.630 0.00 0.00 0.00 2.52
2592 5403 9.844257 TTTTCTCTCTCTTCATTCTTTCTTTCT 57.156 29.630 0.00 0.00 0.00 2.52
2597 5408 8.288913 CACCTTTTTCTCTCTCTTCATTCTTTC 58.711 37.037 0.00 0.00 0.00 2.62
2603 5414 5.513962 GGACCACCTTTTTCTCTCTCTTCAT 60.514 44.000 0.00 0.00 0.00 2.57
2610 5421 2.143925 CGTGGACCACCTTTTTCTCTC 58.856 52.381 19.11 0.00 37.04 3.20
2616 5427 2.593436 CGGCGTGGACCACCTTTT 60.593 61.111 19.11 0.00 37.04 2.27
2629 5440 2.900337 GTAGGATTTGGCCCGGCG 60.900 66.667 0.00 0.00 0.00 6.46
2632 5443 1.817941 CCACGTAGGATTTGGCCCG 60.818 63.158 0.00 0.00 41.22 6.13
2644 5455 1.985662 CTGGGTAGGGTGCCACGTA 60.986 63.158 0.00 0.00 0.00 3.57
2657 5468 0.614979 ATGTCTAGGCGTGTCTGGGT 60.615 55.000 0.00 0.00 0.00 4.51
2658 5469 1.067212 GTATGTCTAGGCGTGTCTGGG 59.933 57.143 0.00 0.00 0.00 4.45
2659 5470 1.067212 GGTATGTCTAGGCGTGTCTGG 59.933 57.143 0.00 0.00 0.00 3.86
2660 5471 1.067212 GGGTATGTCTAGGCGTGTCTG 59.933 57.143 0.00 0.00 0.00 3.51
2661 5472 1.341679 TGGGTATGTCTAGGCGTGTCT 60.342 52.381 0.00 0.00 0.00 3.41
2662 5473 1.108776 TGGGTATGTCTAGGCGTGTC 58.891 55.000 0.00 0.00 0.00 3.67
2663 5474 1.789523 ATGGGTATGTCTAGGCGTGT 58.210 50.000 0.00 0.00 0.00 4.49
2664 5475 3.119101 GGATATGGGTATGTCTAGGCGTG 60.119 52.174 0.00 0.00 0.00 5.34
2665 5476 3.097614 GGATATGGGTATGTCTAGGCGT 58.902 50.000 0.00 0.00 0.00 5.68
2666 5477 3.366396 AGGATATGGGTATGTCTAGGCG 58.634 50.000 0.00 0.00 0.00 5.52
2670 5481 5.363124 TGGGAAGGATATGGGTATGTCTA 57.637 43.478 0.00 0.00 0.00 2.59
2699 5510 6.202954 CCGTCTACAAATCCTCATATCCAAAC 59.797 42.308 0.00 0.00 0.00 2.93
2700 5511 6.099125 TCCGTCTACAAATCCTCATATCCAAA 59.901 38.462 0.00 0.00 0.00 3.28
2713 5524 1.067354 GTGTCCGGTCCGTCTACAAAT 60.067 52.381 11.06 0.00 0.00 2.32
2735 5546 3.206150 CATATTCCTCACTTTGTCCGGG 58.794 50.000 0.00 0.00 0.00 5.73
2781 5594 4.560128 CCCGATAACTGTATGGACATGAG 58.440 47.826 0.00 0.00 34.24 2.90
2788 5601 2.548067 GGACAGCCCGATAACTGTATGG 60.548 54.545 0.00 0.00 46.82 2.74
2810 5623 1.680249 GGAGCCCTCAAATGTCTCACC 60.680 57.143 0.00 0.00 0.00 4.02
2811 5624 1.743996 GGAGCCCTCAAATGTCTCAC 58.256 55.000 0.00 0.00 0.00 3.51
2817 5630 1.315257 CCAACCGGAGCCCTCAAATG 61.315 60.000 9.46 0.00 0.00 2.32
2818 5631 1.000896 CCAACCGGAGCCCTCAAAT 60.001 57.895 9.46 0.00 0.00 2.32
2862 5675 8.271458 TCTTAGTTATGATGCATAAACCCAGAA 58.729 33.333 0.00 0.00 37.94 3.02
2898 5711 0.678048 GCAGTCCCAGTGTTCCATCC 60.678 60.000 0.00 0.00 0.00 3.51
2900 5713 1.380302 GGCAGTCCCAGTGTTCCAT 59.620 57.895 0.00 0.00 0.00 3.41
2927 5740 6.346096 ACTTAAGGTGCGTGTATCAATACAT 58.654 36.000 7.53 0.00 44.25 2.29
2928 5741 5.726397 ACTTAAGGTGCGTGTATCAATACA 58.274 37.500 7.53 0.00 40.69 2.29
2929 5742 7.198390 TCTACTTAAGGTGCGTGTATCAATAC 58.802 38.462 7.53 0.00 0.00 1.89
2930 5743 7.337480 TCTACTTAAGGTGCGTGTATCAATA 57.663 36.000 7.53 0.00 0.00 1.90
2931 5744 6.216801 TCTACTTAAGGTGCGTGTATCAAT 57.783 37.500 7.53 0.00 0.00 2.57
2932 5745 5.648178 TCTACTTAAGGTGCGTGTATCAA 57.352 39.130 7.53 0.00 0.00 2.57
2933 5746 5.047872 TGTTCTACTTAAGGTGCGTGTATCA 60.048 40.000 7.53 0.00 0.00 2.15
2934 5747 5.287992 GTGTTCTACTTAAGGTGCGTGTATC 59.712 44.000 7.53 0.00 0.00 2.24
2935 5748 5.166398 GTGTTCTACTTAAGGTGCGTGTAT 58.834 41.667 7.53 0.00 0.00 2.29
2936 5749 4.549458 GTGTTCTACTTAAGGTGCGTGTA 58.451 43.478 7.53 0.00 0.00 2.90
2937 5750 3.387397 GTGTTCTACTTAAGGTGCGTGT 58.613 45.455 7.53 0.00 0.00 4.49
2938 5751 2.735134 GGTGTTCTACTTAAGGTGCGTG 59.265 50.000 7.53 0.00 0.00 5.34
2939 5752 2.631545 AGGTGTTCTACTTAAGGTGCGT 59.368 45.455 7.53 0.00 0.00 5.24
2940 5753 3.314541 AGGTGTTCTACTTAAGGTGCG 57.685 47.619 7.53 0.00 0.00 5.34
2941 5754 4.020839 TGGTAGGTGTTCTACTTAAGGTGC 60.021 45.833 7.53 0.00 45.78 5.01
2942 5755 5.011329 TGTGGTAGGTGTTCTACTTAAGGTG 59.989 44.000 7.53 0.00 45.78 4.00
2943 5756 5.011431 GTGTGGTAGGTGTTCTACTTAAGGT 59.989 44.000 7.53 0.00 45.78 3.50
2944 5757 5.245526 AGTGTGGTAGGTGTTCTACTTAAGG 59.754 44.000 7.53 0.00 45.78 2.69
2945 5758 6.015688 TCAGTGTGGTAGGTGTTCTACTTAAG 60.016 42.308 0.00 0.00 45.78 1.85
2946 5759 5.834742 TCAGTGTGGTAGGTGTTCTACTTAA 59.165 40.000 0.00 0.00 45.78 1.85
2947 5760 5.387788 TCAGTGTGGTAGGTGTTCTACTTA 58.612 41.667 0.00 0.00 45.78 2.24
2948 5761 4.220724 TCAGTGTGGTAGGTGTTCTACTT 58.779 43.478 0.00 0.00 45.78 2.24
2949 5762 3.840991 TCAGTGTGGTAGGTGTTCTACT 58.159 45.455 0.00 0.00 45.78 2.57
2950 5763 4.381718 GGATCAGTGTGGTAGGTGTTCTAC 60.382 50.000 0.00 0.00 45.78 2.59
2951 5764 3.767673 GGATCAGTGTGGTAGGTGTTCTA 59.232 47.826 0.00 0.00 0.00 2.10
2952 5765 2.567615 GGATCAGTGTGGTAGGTGTTCT 59.432 50.000 0.00 0.00 0.00 3.01
2953 5766 2.354805 GGGATCAGTGTGGTAGGTGTTC 60.355 54.545 0.00 0.00 0.00 3.18
2954 5767 1.628846 GGGATCAGTGTGGTAGGTGTT 59.371 52.381 0.00 0.00 0.00 3.32
2955 5768 1.276622 GGGATCAGTGTGGTAGGTGT 58.723 55.000 0.00 0.00 0.00 4.16
2956 5769 0.541863 GGGGATCAGTGTGGTAGGTG 59.458 60.000 0.00 0.00 0.00 4.00
2957 5770 0.417841 AGGGGATCAGTGTGGTAGGT 59.582 55.000 0.00 0.00 0.00 3.08
2958 5771 1.584724 AAGGGGATCAGTGTGGTAGG 58.415 55.000 0.00 0.00 0.00 3.18
2959 5772 2.571653 TGAAAGGGGATCAGTGTGGTAG 59.428 50.000 0.00 0.00 0.00 3.18
2960 5773 2.626785 TGAAAGGGGATCAGTGTGGTA 58.373 47.619 0.00 0.00 0.00 3.25
2961 5774 1.444933 TGAAAGGGGATCAGTGTGGT 58.555 50.000 0.00 0.00 0.00 4.16
2962 5775 2.162681 GTTGAAAGGGGATCAGTGTGG 58.837 52.381 0.00 0.00 0.00 4.17
2963 5776 3.077359 GAGTTGAAAGGGGATCAGTGTG 58.923 50.000 0.00 0.00 0.00 3.82
2964 5777 2.982488 AGAGTTGAAAGGGGATCAGTGT 59.018 45.455 0.00 0.00 0.00 3.55
2965 5778 3.710209 AGAGTTGAAAGGGGATCAGTG 57.290 47.619 0.00 0.00 0.00 3.66
2966 5779 4.731313 AAAGAGTTGAAAGGGGATCAGT 57.269 40.909 0.00 0.00 0.00 3.41
2990 5803 0.959553 GTGAGGACACGACAAGGAGA 59.040 55.000 0.00 0.00 37.28 3.71
3001 5814 4.680708 GCCGAAAGAGAATATGTGAGGACA 60.681 45.833 0.00 0.00 36.22 4.02
3002 5815 3.804873 GCCGAAAGAGAATATGTGAGGAC 59.195 47.826 0.00 0.00 0.00 3.85
3015 5828 1.518133 CTGGAGCGAGCCGAAAGAG 60.518 63.158 0.00 0.00 0.00 2.85
3017 5830 2.097038 CACTGGAGCGAGCCGAAAG 61.097 63.158 0.00 0.00 0.00 2.62
3018 5831 2.048222 CACTGGAGCGAGCCGAAA 60.048 61.111 0.00 0.00 0.00 3.46
3040 5853 7.145985 GTCCATAAATCACTTAGCGATGACTA 58.854 38.462 0.00 0.00 0.00 2.59
3045 5858 5.300752 CAGGTCCATAAATCACTTAGCGAT 58.699 41.667 0.00 0.00 0.00 4.58
3048 5861 5.036117 TCCAGGTCCATAAATCACTTAGC 57.964 43.478 0.00 0.00 0.00 3.09
3052 5865 6.770286 ATACATCCAGGTCCATAAATCACT 57.230 37.500 0.00 0.00 0.00 3.41
3081 5894 5.066764 GGCAGTACAAAGAACACCAAAAGTA 59.933 40.000 0.00 0.00 0.00 2.24
3091 5904 6.371548 TCAACTATCATGGCAGTACAAAGAAC 59.628 38.462 0.00 0.00 0.00 3.01
3096 5909 5.988287 TGATCAACTATCATGGCAGTACAA 58.012 37.500 0.00 0.00 39.77 2.41
3118 5931 6.669125 TGCAAGGGGGATATTCATTTATTG 57.331 37.500 0.00 0.00 0.00 1.90
3152 5968 9.912634 ATCAAAGTGATAAAATTGGTACAACTG 57.087 29.630 0.00 0.00 38.51 3.16
3224 6040 3.832490 GGCCATATGGTAGGGAATTTTCC 59.168 47.826 22.79 7.19 41.19 3.13
3225 6041 4.740902 AGGCCATATGGTAGGGAATTTTC 58.259 43.478 22.79 1.56 37.57 2.29
3226 6042 4.832560 AGGCCATATGGTAGGGAATTTT 57.167 40.909 22.79 0.00 37.57 1.82
3230 6046 3.071892 CGTAAAGGCCATATGGTAGGGAA 59.928 47.826 22.79 2.49 37.57 3.97
3246 6062 3.917985 GCAAGGTTTGTATTGCCGTAAAG 59.082 43.478 0.00 0.00 44.76 1.85
3247 6063 3.903360 GCAAGGTTTGTATTGCCGTAAA 58.097 40.909 0.00 0.00 44.76 2.01
3248 6064 3.562567 GCAAGGTTTGTATTGCCGTAA 57.437 42.857 0.00 0.00 44.76 3.18
3432 6257 5.627182 ATCCTCAAGCTACAATGATGTCT 57.373 39.130 0.00 0.00 41.05 3.41
3455 6280 3.558931 ATCGCCACAATGATAAGACCA 57.441 42.857 0.00 0.00 0.00 4.02
3508 6333 5.836347 TGATGGATTAACTCTCATGTCTCG 58.164 41.667 0.00 0.00 0.00 4.04
3609 6451 8.511604 ACAAGTGTCCCATTAAAGATAATCTG 57.488 34.615 0.00 0.00 29.08 2.90
3637 6479 6.971527 TGTTATTCGTGTGTAATGGTAAGG 57.028 37.500 0.00 0.00 0.00 2.69
3759 6624 1.854227 GTGATTAGCCGACTACCAGC 58.146 55.000 0.00 0.00 0.00 4.85
3863 6728 2.436417 TGGAAGAGCCTTTTGGAATCG 58.564 47.619 0.00 0.00 44.07 3.34
3907 6772 4.220693 TCAAAATCACGAGGACATCCAT 57.779 40.909 0.00 0.00 38.89 3.41
4041 6906 4.130118 CGCCCAATAGACTCTAGCAAAAT 58.870 43.478 0.00 0.00 0.00 1.82
4072 6937 2.242965 TCCTCTATACTGGGGTGTTCGA 59.757 50.000 0.00 0.00 0.00 3.71
4077 6942 3.850752 ACATCTCCTCTATACTGGGGTG 58.149 50.000 0.00 0.00 0.00 4.61
4183 7048 6.384258 TCAACTGATCTTTCTCGATCCTAG 57.616 41.667 0.00 0.00 39.20 3.02
4191 7056 7.172875 CCACATCCATATCAACTGATCTTTCTC 59.827 40.741 0.00 0.00 36.05 2.87
4192 7057 6.996879 CCACATCCATATCAACTGATCTTTCT 59.003 38.462 0.00 0.00 36.05 2.52
4232 7097 6.218019 AGATGTTGTTGTTTCACATTGGATG 58.782 36.000 0.00 0.00 0.00 3.51
4252 7117 9.605275 TTTCTCCAATCTGAAACATACTAGATG 57.395 33.333 0.00 0.00 30.77 2.90
4293 7158 5.435291 CTGGAGAAGGCTTCTATTCACAAT 58.565 41.667 28.64 4.60 40.87 2.71
4371 7245 8.359642 CCTTGACAAAAGACAAATTAGATCCAA 58.640 33.333 0.00 0.00 0.00 3.53
4455 7338 1.333636 ATCTTCTGGAGGGACAGCCG 61.334 60.000 0.00 0.00 38.36 5.52
4477 7360 3.563808 TGTGGTTTCATGTTCTTCTTCGG 59.436 43.478 0.00 0.00 0.00 4.30
4502 7385 4.984785 TGTAGCATATTCACAGATTCGAGC 59.015 41.667 0.00 0.00 0.00 5.03
4516 7399 5.371526 CAATGGACCTCAGTTGTAGCATAT 58.628 41.667 0.00 0.00 0.00 1.78
4527 7410 3.256383 TCAAATGTTGCAATGGACCTCAG 59.744 43.478 0.59 0.00 0.00 3.35
4574 7460 3.722728 AAAACAGCAAAGCTTGAGAGG 57.277 42.857 0.00 0.00 36.40 3.69
4755 7677 2.848302 GTCGTTCTATACCACGGTTTCG 59.152 50.000 0.00 0.00 43.02 3.46
4897 7825 6.162079 TCTTTCACAATGCTTAGAGAGTCAG 58.838 40.000 0.00 0.00 0.00 3.51
4970 7898 1.988107 TCCTCCAACTCCAAGCTCATT 59.012 47.619 0.00 0.00 0.00 2.57
4999 7927 5.419542 TGGACATTTCCTCTAGTGATTTCG 58.580 41.667 0.00 0.00 43.31 3.46
5050 7978 6.914665 TCCATCATCTTAGATCCACCATTTT 58.085 36.000 0.00 0.00 0.00 1.82
5051 7979 6.520021 TCCATCATCTTAGATCCACCATTT 57.480 37.500 0.00 0.00 0.00 2.32
5052 7980 6.504634 AGATCCATCATCTTAGATCCACCATT 59.495 38.462 0.00 0.00 38.95 3.16
5066 7994 2.342659 TCCCCCAAGAGATCCATCATC 58.657 52.381 0.00 0.00 0.00 2.92
5140 8068 4.708177 TGGCAGCCTAGAGAATTTACATC 58.292 43.478 14.15 0.00 0.00 3.06
5146 8074 0.914644 TGCTGGCAGCCTAGAGAATT 59.085 50.000 34.58 0.00 41.51 2.17
5189 8117 7.496529 TTGTAAGTTTGAGAGATGTGAAAGG 57.503 36.000 0.00 0.00 0.00 3.11
5192 8120 9.734620 CAAATTTGTAAGTTTGAGAGATGTGAA 57.265 29.630 10.15 0.00 37.48 3.18
5195 8123 8.686334 ACACAAATTTGTAAGTTTGAGAGATGT 58.314 29.630 22.87 9.12 39.91 3.06
5198 8126 8.275015 TCACACAAATTTGTAAGTTTGAGAGA 57.725 30.769 22.87 9.67 39.91 3.10
5244 8172 1.815003 CAATCTTCCAAGCAGTCCCAC 59.185 52.381 0.00 0.00 0.00 4.61
5261 8189 1.765314 AGAGTATGAAGAGCCGGCAAT 59.235 47.619 31.54 14.26 0.00 3.56
5282 8210 2.693762 GCGAAGGCTCTGCAATGCA 61.694 57.895 7.99 7.99 34.77 3.96
5308 8236 3.011818 CCATCAGCATTGACAAGTAGCA 58.988 45.455 11.20 0.00 35.83 3.49
5315 8243 1.838112 GGAACCCATCAGCATTGACA 58.162 50.000 0.00 0.00 35.83 3.58
5319 8247 1.176527 CAACGGAACCCATCAGCATT 58.823 50.000 0.00 0.00 0.00 3.56
5384 8312 1.041447 GCAATGCTCCTGGCTGGAAT 61.041 55.000 14.44 3.28 45.63 3.01
5413 8341 2.419990 CCGACATGGAGCAGAACCATTA 60.420 50.000 0.00 0.00 44.51 1.90
5421 8349 0.817654 TGTAGACCGACATGGAGCAG 59.182 55.000 0.00 0.00 42.00 4.24
5430 8358 3.872771 TGTTTTGAAACCTGTAGACCGAC 59.127 43.478 4.32 0.00 38.11 4.79
5438 8366 3.096092 TGCTTCCTGTTTTGAAACCTGT 58.904 40.909 4.32 0.00 38.11 4.00
5440 8368 2.101415 GCTGCTTCCTGTTTTGAAACCT 59.899 45.455 4.32 0.00 38.11 3.50
5444 8372 1.682854 CCAGCTGCTTCCTGTTTTGAA 59.317 47.619 8.66 0.00 0.00 2.69
5445 8373 1.321474 CCAGCTGCTTCCTGTTTTGA 58.679 50.000 8.66 0.00 0.00 2.69
5451 8379 3.123620 GTCGCCAGCTGCTTCCTG 61.124 66.667 8.66 0.00 38.05 3.86
5470 8401 3.903090 ACCCATGTCAAACAAATCACCAT 59.097 39.130 0.00 0.00 0.00 3.55
5492 8423 3.440415 AGGGACGGAAGGTTCCCGATA 62.440 57.143 8.65 0.00 46.73 2.92
5529 8460 3.588955 GCGAAGGGCAGAATTTGAATTT 58.411 40.909 0.00 0.00 42.87 1.82
5564 8504 2.096268 TGCAGAATTCGCTTTCTTGACG 60.096 45.455 18.44 0.00 33.69 4.35
5566 8509 3.058708 CAGTGCAGAATTCGCTTTCTTGA 60.059 43.478 18.44 0.11 33.69 3.02
5618 8561 1.034292 GTACGGAGGCGTAAGAGGGT 61.034 60.000 0.00 0.00 43.02 4.34
5623 8569 0.529378 ACCTTGTACGGAGGCGTAAG 59.471 55.000 13.44 0.00 37.84 2.34
5629 8575 2.749621 AGTTACGTACCTTGTACGGAGG 59.250 50.000 25.08 12.26 44.38 4.30
5637 8583 4.335037 GGACCTCTCTAGTTACGTACCTTG 59.665 50.000 0.00 0.00 0.00 3.61
5652 8598 2.098770 GCAAAAGCATCATGGACCTCTC 59.901 50.000 0.00 0.00 0.00 3.20
5657 8603 4.708726 AACTAGCAAAAGCATCATGGAC 57.291 40.909 0.00 0.00 0.00 4.02
5658 8604 5.336690 GGAAAACTAGCAAAAGCATCATGGA 60.337 40.000 0.00 0.00 0.00 3.41
5670 8617 6.490040 AGACAAGCATTAAGGAAAACTAGCAA 59.510 34.615 0.00 0.00 0.00 3.91
5672 8619 6.502136 AGACAAGCATTAAGGAAAACTAGC 57.498 37.500 0.00 0.00 0.00 3.42
5673 8620 8.099364 TGAAGACAAGCATTAAGGAAAACTAG 57.901 34.615 0.00 0.00 0.00 2.57
5675 8622 6.959639 TGAAGACAAGCATTAAGGAAAACT 57.040 33.333 0.00 0.00 0.00 2.66
5771 8748 1.694150 CAGGTTCTTCACTCCCACTCA 59.306 52.381 0.00 0.00 0.00 3.41
5792 8805 5.641636 CACACTGTATGTAACAACCTGCATA 59.358 40.000 0.00 0.00 40.64 3.14
5850 10276 8.771286 TGGGGTACGTATATATACATAGTCTGA 58.229 37.037 20.24 0.00 32.87 3.27
5874 10331 5.939296 ACAGGGAAACAAAATATTTGCATGG 59.061 36.000 0.39 0.00 41.59 3.66
5892 10350 5.512942 TGGATTTATGAACAAGACAGGGA 57.487 39.130 0.00 0.00 0.00 4.20
5897 10355 9.884465 GTATAAGCATGGATTTATGAACAAGAC 57.116 33.333 0.00 0.00 0.00 3.01
5911 10372 4.629634 CACGTCACAAAGTATAAGCATGGA 59.370 41.667 0.00 0.00 0.00 3.41
5942 10403 4.530553 TCTCCAGTAAACAATGACAGCCTA 59.469 41.667 0.00 0.00 0.00 3.93
5943 10404 3.327757 TCTCCAGTAAACAATGACAGCCT 59.672 43.478 0.00 0.00 0.00 4.58
5944 10405 3.437049 GTCTCCAGTAAACAATGACAGCC 59.563 47.826 0.00 0.00 0.00 4.85
5972 10436 1.364626 GCCAGATTCCAGACGCACTG 61.365 60.000 3.64 3.64 45.36 3.66
5973 10437 1.078848 GCCAGATTCCAGACGCACT 60.079 57.895 0.00 0.00 0.00 4.40
6014 10478 2.691409 AGCGCAAGGAATAGCAAGTA 57.309 45.000 11.47 0.00 38.28 2.24
6030 10494 1.731160 CTCTGAGCCAAGAAAGAAGCG 59.269 52.381 0.00 0.00 0.00 4.68
6078 10543 7.436430 TTTTTGTTTGTTTGTAACTTTCCCC 57.564 32.000 0.00 0.00 0.00 4.81
6106 10571 2.163412 AGCTCAACAAAAAGTGCGTGAA 59.837 40.909 0.00 0.00 0.00 3.18
6197 10663 9.583765 AAGGAACACGTAGAACTATAAAAGATC 57.416 33.333 0.00 0.00 0.00 2.75
6344 10956 0.553819 ACACCAGGGGTTACAAAGCA 59.446 50.000 0.00 0.00 31.02 3.91
6355 10967 1.138859 TGAAGCGATATGACACCAGGG 59.861 52.381 0.00 0.00 0.00 4.45
6369 10981 3.641648 TGGATTTTCTTTGCTTGAAGCG 58.358 40.909 13.05 0.00 46.26 4.68
6436 11053 0.764271 CCACAGGCCAAAACCCAAAT 59.236 50.000 5.01 0.00 0.00 2.32
6466 11085 2.204029 ACCTCCCACGCCCCTAAA 60.204 61.111 0.00 0.00 0.00 1.85
6467 11086 3.006728 CACCTCCCACGCCCCTAA 61.007 66.667 0.00 0.00 0.00 2.69
6474 11093 4.029809 GTTCCCCCACCTCCCACG 62.030 72.222 0.00 0.00 0.00 4.94
6494 11113 6.364568 AGCATAACATCAGTATCATAGGCA 57.635 37.500 0.00 0.00 0.00 4.75
6608 11228 6.663944 AAACGCCAGTATTAAAGAGTCATC 57.336 37.500 0.00 0.00 0.00 2.92
6699 11323 4.379339 TTTGGTGCCTTTGAAACAGTAC 57.621 40.909 0.00 0.00 0.00 2.73
6702 11326 4.635324 ACAAATTTGGTGCCTTTGAAACAG 59.365 37.500 21.74 0.00 34.69 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.