Multiple sequence alignment - TraesCS2B01G037700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G037700 chr2B 100.000 3512 0 0 1 3512 17516315 17512804 0.000000e+00 6486.0
1 TraesCS2B01G037700 chr2B 92.984 1468 97 3 1211 2674 17444261 17445726 0.000000e+00 2135.0
2 TraesCS2B01G037700 chr2B 88.199 1788 184 18 997 2768 17503300 17501524 0.000000e+00 2108.0
3 TraesCS2B01G037700 chr2B 86.255 1506 185 14 991 2486 17440246 17438753 0.000000e+00 1615.0
4 TraesCS2B01G037700 chr2B 86.414 1163 131 11 1633 2769 17149599 17150760 0.000000e+00 1247.0
5 TraesCS2B01G037700 chr2B 86.916 642 68 12 1004 1637 17143918 17144551 0.000000e+00 706.0
6 TraesCS2B01G037700 chr2B 89.218 473 44 6 1 471 566394465 566393998 5.050000e-163 584.0
7 TraesCS2B01G037700 chr2B 86.853 502 54 11 2040 2539 17094640 17094149 5.120000e-153 551.0
8 TraesCS2B01G037700 chr2B 83.690 374 50 8 2178 2550 17151283 17151646 3.360000e-90 342.0
9 TraesCS2B01G037700 chr2B 82.353 374 46 8 2178 2550 17445982 17446336 1.220000e-79 307.0
10 TraesCS2B01G037700 chr2B 98.171 164 3 0 3344 3507 17501476 17501313 1.600000e-73 287.0
11 TraesCS2B01G037700 chr2B 93.220 177 8 1 3035 3211 215471787 215471615 1.250000e-64 257.0
12 TraesCS2B01G037700 chr2B 92.697 178 10 1 3035 3212 106164670 106164496 1.620000e-63 254.0
13 TraesCS2B01G037700 chr2B 73.582 617 143 17 1852 2455 5717571 5716962 5.900000e-53 219.0
14 TraesCS2B01G037700 chr2B 96.875 32 0 1 2962 2993 17513305 17513275 6.000000e-03 52.8
15 TraesCS2B01G037700 chr2B 96.875 32 0 1 3011 3041 17513354 17513323 6.000000e-03 52.8
16 TraesCS2B01G037700 chr2D 92.653 1647 111 6 909 2550 11327892 11326251 0.000000e+00 2362.0
17 TraesCS2B01G037700 chr2D 92.179 179 10 3 3035 3213 459317611 459317437 2.090000e-62 250.0
18 TraesCS2B01G037700 chr2A 90.992 1654 127 16 909 2550 11983465 11981822 0.000000e+00 2209.0
19 TraesCS2B01G037700 chr2A 87.885 454 49 5 2098 2550 11782637 11782189 2.400000e-146 529.0
20 TraesCS2B01G037700 chr2A 92.000 175 13 1 746 920 11983662 11983489 9.740000e-61 244.0
21 TraesCS2B01G037700 chr7A 92.620 542 31 3 1 534 94148196 94147656 0.000000e+00 771.0
22 TraesCS2B01G037700 chr7A 76.050 238 52 5 1177 1413 22198140 22198373 6.160000e-23 119.0
23 TraesCS2B01G037700 chr7A 84.722 72 10 1 2726 2797 47516820 47516750 1.750000e-08 71.3
24 TraesCS2B01G037700 chr4B 95.102 490 18 4 1 486 32962948 32963435 0.000000e+00 767.0
25 TraesCS2B01G037700 chr4B 93.785 177 9 1 3035 3211 22236503 22236329 7.470000e-67 265.0
26 TraesCS2B01G037700 chr4B 92.090 177 13 1 3035 3211 634086521 634086346 7.530000e-62 248.0
27 TraesCS2B01G037700 chr4B 98.851 87 1 0 591 677 32963398 32963484 4.690000e-34 156.0
28 TraesCS2B01G037700 chr3B 84.064 684 72 31 1 656 759185814 759186488 2.980000e-175 625.0
29 TraesCS2B01G037700 chr3B 89.218 473 44 6 1 471 803057585 803058052 5.050000e-163 584.0
30 TraesCS2B01G037700 chr3B 72.208 1137 228 47 1156 2260 13905516 13904436 5.780000e-68 268.0
31 TraesCS2B01G037700 chr3B 94.253 174 9 1 3041 3214 706180812 706180640 7.470000e-67 265.0
32 TraesCS2B01G037700 chr7B 95.288 382 9 2 305 677 473646740 473647121 6.490000e-167 597.0
33 TraesCS2B01G037700 chr7B 93.333 180 10 1 3032 3211 356755409 356755586 7.470000e-67 265.0
34 TraesCS2B01G037700 chr4A 89.641 473 42 6 1 471 715990064 715989597 2.330000e-166 595.0
35 TraesCS2B01G037700 chr4A 95.331 257 3 1 430 677 22085162 22085418 1.960000e-107 399.0
36 TraesCS2B01G037700 chr1B 84.959 605 68 17 1 589 32160770 32160173 3.020000e-165 592.0
37 TraesCS2B01G037700 chr1A 88.344 489 50 6 1 487 438676965 438677448 6.530000e-162 580.0
38 TraesCS2B01G037700 chr1A 95.331 257 3 1 430 677 497248224 497248480 1.960000e-107 399.0
39 TraesCS2B01G037700 chrUn 84.452 611 68 19 1 592 47898410 47897808 8.450000e-161 577.0
40 TraesCS2B01G037700 chr5A 94.534 311 6 3 377 677 3306287 3306596 1.480000e-128 470.0
41 TraesCS2B01G037700 chr6B 93.785 177 6 4 3035 3211 653759422 653759593 9.670000e-66 261.0
42 TraesCS2B01G037700 chr6D 92.090 177 12 1 3035 3211 430404008 430404182 7.530000e-62 248.0
43 TraesCS2B01G037700 chr5B 99.145 117 1 0 561 677 669725483 669725367 9.880000e-51 211.0
44 TraesCS2B01G037700 chr5B 100.000 28 0 0 2769 2796 406579273 406579300 6.000000e-03 52.8
45 TraesCS2B01G037700 chr3A 82.051 234 12 16 444 677 40867985 40867782 4.660000e-39 172.0
46 TraesCS2B01G037700 chr7D 71.517 804 176 41 1159 1943 21773872 21774641 2.170000e-37 167.0
47 TraesCS2B01G037700 chr1D 87.500 72 8 1 2726 2797 71607662 71607592 8.080000e-12 82.4
48 TraesCS2B01G037700 chr1D 96.970 33 1 0 2769 2801 381304017 381304049 4.900000e-04 56.5
49 TraesCS2B01G037700 chr1D 100.000 28 0 0 2769 2796 476713271 476713298 6.000000e-03 52.8
50 TraesCS2B01G037700 chr4D 100.000 28 0 0 2769 2796 503564430 503564457 6.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G037700 chr2B 17512804 17516315 3511 True 2197.2 6486 97.916667 1 3512 3 chr2B.!!$R8 3511
1 TraesCS2B01G037700 chr2B 17438753 17440246 1493 True 1615.0 1615 86.255000 991 2486 1 chr2B.!!$R3 1495
2 TraesCS2B01G037700 chr2B 17444261 17446336 2075 False 1221.0 2135 87.668500 1211 2674 2 chr2B.!!$F3 1463
3 TraesCS2B01G037700 chr2B 17501313 17503300 1987 True 1197.5 2108 93.185000 997 3507 2 chr2B.!!$R7 2510
4 TraesCS2B01G037700 chr2B 17149599 17151646 2047 False 794.5 1247 85.052000 1633 2769 2 chr2B.!!$F2 1136
5 TraesCS2B01G037700 chr2B 17143918 17144551 633 False 706.0 706 86.916000 1004 1637 1 chr2B.!!$F1 633
6 TraesCS2B01G037700 chr2B 5716962 5717571 609 True 219.0 219 73.582000 1852 2455 1 chr2B.!!$R1 603
7 TraesCS2B01G037700 chr2D 11326251 11327892 1641 True 2362.0 2362 92.653000 909 2550 1 chr2D.!!$R1 1641
8 TraesCS2B01G037700 chr2A 11981822 11983662 1840 True 1226.5 2209 91.496000 746 2550 2 chr2A.!!$R2 1804
9 TraesCS2B01G037700 chr7A 94147656 94148196 540 True 771.0 771 92.620000 1 534 1 chr7A.!!$R2 533
10 TraesCS2B01G037700 chr4B 32962948 32963484 536 False 461.5 767 96.976500 1 677 2 chr4B.!!$F1 676
11 TraesCS2B01G037700 chr3B 759185814 759186488 674 False 625.0 625 84.064000 1 656 1 chr3B.!!$F1 655
12 TraesCS2B01G037700 chr3B 13904436 13905516 1080 True 268.0 268 72.208000 1156 2260 1 chr3B.!!$R1 1104
13 TraesCS2B01G037700 chr1B 32160173 32160770 597 True 592.0 592 84.959000 1 589 1 chr1B.!!$R1 588
14 TraesCS2B01G037700 chrUn 47897808 47898410 602 True 577.0 577 84.452000 1 592 1 chrUn.!!$R1 591

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
693 702 1.075482 TGGAAGGGCCAGAGCTTTG 59.925 57.895 6.18 0.0 43.33 2.77 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2577 3823 0.110644 GAAACCGACAGAAAGCAGCG 60.111 55.0 0.0 0.0 0.0 5.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
181 182 2.099652 CTCCGCCTCACCACACAGAA 62.100 60.000 0.00 0.00 0.00 3.02
494 503 3.327404 GACGGCAGGGAAGGGGAA 61.327 66.667 0.00 0.00 0.00 3.97
495 504 3.330720 ACGGCAGGGAAGGGGAAG 61.331 66.667 0.00 0.00 0.00 3.46
496 505 4.115199 CGGCAGGGAAGGGGAAGG 62.115 72.222 0.00 0.00 0.00 3.46
497 506 3.744155 GGCAGGGAAGGGGAAGGG 61.744 72.222 0.00 0.00 0.00 3.95
498 507 4.448976 GCAGGGAAGGGGAAGGGC 62.449 72.222 0.00 0.00 0.00 5.19
499 508 4.115199 CAGGGAAGGGGAAGGGCG 62.115 72.222 0.00 0.00 0.00 6.13
502 511 3.097162 GGAAGGGGAAGGGCGGAT 61.097 66.667 0.00 0.00 0.00 4.18
503 512 2.511403 GAAGGGGAAGGGCGGATC 59.489 66.667 0.00 0.00 0.00 3.36
504 513 3.462199 GAAGGGGAAGGGCGGATCG 62.462 68.421 0.00 0.00 0.00 3.69
505 514 3.995809 AAGGGGAAGGGCGGATCGA 62.996 63.158 0.00 0.00 0.00 3.59
506 515 4.237207 GGGGAAGGGCGGATCGAC 62.237 72.222 0.00 0.00 0.00 4.20
507 516 4.587189 GGGAAGGGCGGATCGACG 62.587 72.222 0.00 0.00 34.63 5.12
574 583 3.707189 GGAAGGAGGGGGAGGGGA 61.707 72.222 0.00 0.00 0.00 4.81
575 584 2.040359 GAAGGAGGGGGAGGGGAG 60.040 72.222 0.00 0.00 0.00 4.30
576 585 3.711782 AAGGAGGGGGAGGGGAGG 61.712 72.222 0.00 0.00 0.00 4.30
577 586 4.761304 AGGAGGGGGAGGGGAGGA 62.761 72.222 0.00 0.00 0.00 3.71
578 587 4.179599 GGAGGGGGAGGGGAGGAG 62.180 77.778 0.00 0.00 0.00 3.69
579 588 4.179599 GAGGGGGAGGGGAGGAGG 62.180 77.778 0.00 0.00 0.00 4.30
679 688 4.090588 CGGCGGCTAGGGTTGGAA 62.091 66.667 7.61 0.00 0.00 3.53
680 689 2.124695 GGCGGCTAGGGTTGGAAG 60.125 66.667 0.00 0.00 0.00 3.46
681 690 2.124695 GCGGCTAGGGTTGGAAGG 60.125 66.667 0.00 0.00 0.00 3.46
682 691 2.590092 CGGCTAGGGTTGGAAGGG 59.410 66.667 0.00 0.00 0.00 3.95
683 692 2.275748 GGCTAGGGTTGGAAGGGC 59.724 66.667 0.00 0.00 0.00 5.19
684 693 2.275748 GCTAGGGTTGGAAGGGCC 59.724 66.667 0.00 0.00 37.10 5.80
692 701 3.593048 TGGAAGGGCCAGAGCTTT 58.407 55.556 6.18 0.00 43.33 3.51
693 702 1.075482 TGGAAGGGCCAGAGCTTTG 59.925 57.895 6.18 0.00 43.33 2.77
694 703 1.680314 GGAAGGGCCAGAGCTTTGG 60.680 63.158 18.91 18.91 41.35 3.28
705 714 2.356194 GCTTTGGCTTTGGCACGG 60.356 61.111 0.00 0.00 37.98 4.94
706 715 2.339712 CTTTGGCTTTGGCACGGG 59.660 61.111 0.00 0.00 37.98 5.28
707 716 3.864160 CTTTGGCTTTGGCACGGGC 62.864 63.158 0.00 0.00 37.98 6.13
711 720 3.910490 GCTTTGGCACGGGCACAA 61.910 61.111 13.89 11.03 43.71 3.33
712 721 2.811101 CTTTGGCACGGGCACAAA 59.189 55.556 20.29 20.29 43.71 2.83
713 722 1.591327 CTTTGGCACGGGCACAAAC 60.591 57.895 13.89 0.00 43.71 2.93
714 723 2.969677 CTTTGGCACGGGCACAAACC 62.970 60.000 13.89 0.00 43.71 3.27
723 732 2.109425 GGGCACAAACCGAGATTAGT 57.891 50.000 0.00 0.00 0.00 2.24
724 733 1.737793 GGGCACAAACCGAGATTAGTG 59.262 52.381 0.00 0.00 0.00 2.74
725 734 2.527442 GCACAAACCGAGATTAGTGC 57.473 50.000 0.00 0.00 44.31 4.40
726 735 2.076863 GCACAAACCGAGATTAGTGCT 58.923 47.619 7.98 0.00 46.31 4.40
727 736 2.094417 GCACAAACCGAGATTAGTGCTC 59.906 50.000 7.98 0.00 46.31 4.26
728 737 3.325870 CACAAACCGAGATTAGTGCTCA 58.674 45.455 0.00 0.00 32.67 4.26
729 738 3.935203 CACAAACCGAGATTAGTGCTCAT 59.065 43.478 0.00 0.00 32.67 2.90
730 739 4.393062 CACAAACCGAGATTAGTGCTCATT 59.607 41.667 0.00 0.00 32.67 2.57
731 740 4.631813 ACAAACCGAGATTAGTGCTCATTC 59.368 41.667 0.00 0.00 32.67 2.67
732 741 4.744795 AACCGAGATTAGTGCTCATTCT 57.255 40.909 0.00 0.00 32.67 2.40
733 742 4.314740 ACCGAGATTAGTGCTCATTCTC 57.685 45.455 0.00 0.00 32.67 2.87
734 743 3.701542 ACCGAGATTAGTGCTCATTCTCA 59.298 43.478 10.95 0.00 33.94 3.27
735 744 4.160439 ACCGAGATTAGTGCTCATTCTCAA 59.840 41.667 10.95 0.00 33.94 3.02
736 745 5.111989 CCGAGATTAGTGCTCATTCTCAAA 58.888 41.667 10.95 0.00 33.94 2.69
737 746 5.582269 CCGAGATTAGTGCTCATTCTCAAAA 59.418 40.000 10.95 0.00 33.94 2.44
738 747 6.259608 CCGAGATTAGTGCTCATTCTCAAAAT 59.740 38.462 10.95 0.00 33.94 1.82
739 748 7.124471 CGAGATTAGTGCTCATTCTCAAAATG 58.876 38.462 10.95 0.00 33.94 2.32
740 749 7.010830 CGAGATTAGTGCTCATTCTCAAAATGA 59.989 37.037 10.95 0.97 33.94 2.57
741 750 8.571461 AGATTAGTGCTCATTCTCAAAATGAA 57.429 30.769 2.46 0.00 36.35 2.57
742 751 9.186837 AGATTAGTGCTCATTCTCAAAATGAAT 57.813 29.630 2.46 0.00 36.35 2.57
743 752 9.448294 GATTAGTGCTCATTCTCAAAATGAATC 57.552 33.333 2.46 0.00 36.35 2.52
744 753 5.877031 AGTGCTCATTCTCAAAATGAATCG 58.123 37.500 2.46 0.00 36.35 3.34
757 766 5.824904 AAATGAATCGCTTGATTAGTGCT 57.175 34.783 0.00 0.00 42.34 4.40
797 806 8.757164 AACTAGTGCATTATTTTTAAAGTGCC 57.243 30.769 0.00 0.00 0.00 5.01
803 812 8.288913 GTGCATTATTTTTAAAGTGCCAACATT 58.711 29.630 0.00 0.00 0.00 2.71
805 814 8.502387 GCATTATTTTTAAAGTGCCAACATTCA 58.498 29.630 0.00 0.00 0.00 2.57
816 825 2.476185 GCCAACATTCATCCTCGAAACG 60.476 50.000 0.00 0.00 0.00 3.60
822 831 2.710220 TCATCCTCGAAACGAAACGA 57.290 45.000 0.00 0.00 34.74 3.85
839 848 6.313905 ACGAAACGAGATGCTTTTAATGAGAT 59.686 34.615 0.00 0.00 0.00 2.75
861 870 3.766591 TCACTCCAAAAGGTGAGCAAAAA 59.233 39.130 0.00 0.00 37.52 1.94
868 877 5.170748 CAAAAGGTGAGCAAAAAGAACACT 58.829 37.500 0.00 0.00 0.00 3.55
876 885 6.806739 GTGAGCAAAAAGAACACTAACAAAGT 59.193 34.615 0.00 0.00 39.81 2.66
1053 1109 4.303086 GCATGCAGCAGATTAAGAATGT 57.697 40.909 14.21 0.00 44.79 2.71
1165 1228 1.306148 CTCGCCATGCACAAGATCAT 58.694 50.000 0.00 0.00 0.00 2.45
1466 1542 2.110213 GTGACGGAGGTGCACCAA 59.890 61.111 36.39 12.45 38.89 3.67
1467 1543 1.302511 GTGACGGAGGTGCACCAAT 60.303 57.895 36.39 18.54 38.89 3.16
1472 1548 0.035439 CGGAGGTGCACCAATACCTT 60.035 55.000 36.39 15.25 46.92 3.50
1731 1807 1.734477 CGCGGTGTTCAGTCTCCTG 60.734 63.158 0.00 0.00 40.25 3.86
1743 1819 3.680786 CTCCTGGACCACGCGACA 61.681 66.667 15.93 2.39 0.00 4.35
1829 1911 1.822613 TCGCGCTCTTAGGGACGAT 60.823 57.895 5.56 0.00 34.16 3.73
1836 1918 2.887783 GCTCTTAGGGACGATGAGATGA 59.112 50.000 0.00 0.00 37.41 2.92
1955 2037 3.626924 AAGCTCCGCGGTGAGGTT 61.627 61.111 30.07 25.46 45.54 3.50
2074 2174 0.816421 CGCCATGTCCATGCTGATGA 60.816 55.000 1.64 0.00 37.49 2.92
2084 2184 1.040893 ATGCTGATGACGTCGGGGTA 61.041 55.000 11.62 1.19 33.56 3.69
2162 2262 2.704424 GGGGGACATTGGCAGGGAT 61.704 63.158 0.00 0.00 0.00 3.85
2168 2268 2.590821 GACATTGGCAGGGATAGCAAT 58.409 47.619 0.00 0.00 0.00 3.56
2186 2286 4.723789 AGCAATATATGGAAGGATCCCGAT 59.276 41.667 8.55 0.00 45.95 4.18
2342 2452 2.283145 ACATGAAGTGCTTCTTGGCT 57.717 45.000 22.90 8.20 44.29 4.75
2345 2455 0.466007 TGAAGTGCTTCTTGGCTGCA 60.466 50.000 12.44 0.00 40.14 4.41
2370 2480 4.415332 GCGAGTTCGAGTGGGCGA 62.415 66.667 5.60 0.00 43.02 5.54
2372 2482 2.649034 GAGTTCGAGTGGGCGACA 59.351 61.111 1.61 0.00 40.42 4.35
2491 3733 9.117183 CAAATCCATCTAAAGATCTCAACATCA 57.883 33.333 0.00 0.00 31.21 3.07
2547 3793 0.179043 TTCTACCGTTGTTGCAGCCA 60.179 50.000 0.00 0.00 0.00 4.75
2577 3823 1.362406 CGCGGAAAGCTTCTCCTTCC 61.362 60.000 19.11 12.96 45.59 3.46
2580 3826 0.035915 GGAAAGCTTCTCCTTCCGCT 60.036 55.000 16.08 0.00 0.00 5.52
2582 3828 0.957888 AAAGCTTCTCCTTCCGCTGC 60.958 55.000 0.00 0.00 32.22 5.25
2631 3877 3.961582 GGAACCCCGGATTTGTACA 57.038 52.632 0.73 0.00 0.00 2.90
2674 3920 2.097791 CGGCTAGGTCTCAGTTGACTAC 59.902 54.545 0.00 0.00 37.16 2.73
2678 3941 2.161030 AGGTCTCAGTTGACTACGTCC 58.839 52.381 0.00 0.00 37.16 4.79
2682 3945 4.157289 GGTCTCAGTTGACTACGTCCAATA 59.843 45.833 0.00 0.00 37.16 1.90
2754 4019 3.635373 GGATCTCCGTGTAAGATACCACA 59.365 47.826 0.00 0.00 33.64 4.17
2761 4026 8.916062 TCTCCGTGTAAGATACCACAAATATAA 58.084 33.333 0.00 0.00 0.00 0.98
2771 4036 9.988815 AGATACCACAAATATAACATGACTCTC 57.011 33.333 0.00 0.00 0.00 3.20
2772 4037 9.764363 GATACCACAAATATAACATGACTCTCA 57.236 33.333 0.00 0.00 0.00 3.27
2773 4038 9.770097 ATACCACAAATATAACATGACTCTCAG 57.230 33.333 0.00 0.00 0.00 3.35
2775 4040 7.766278 ACCACAAATATAACATGACTCTCAGTC 59.234 37.037 0.00 0.00 45.26 3.51
2793 4058 5.633996 CAGTCGACTGAGATTTAGCAATC 57.366 43.478 36.73 0.00 46.59 2.67
2794 4059 4.505922 CAGTCGACTGAGATTTAGCAATCC 59.494 45.833 36.73 0.00 46.59 3.01
2795 4060 4.404073 AGTCGACTGAGATTTAGCAATCCT 59.596 41.667 19.30 0.00 39.95 3.24
2796 4061 5.594725 AGTCGACTGAGATTTAGCAATCCTA 59.405 40.000 19.30 0.00 39.95 2.94
2797 4062 6.096987 AGTCGACTGAGATTTAGCAATCCTAA 59.903 38.462 19.30 0.00 39.95 2.69
2798 4063 6.926272 GTCGACTGAGATTTAGCAATCCTAAT 59.074 38.462 8.70 0.00 39.95 1.73
2799 4064 7.115663 GTCGACTGAGATTTAGCAATCCTAATC 59.884 40.741 8.70 0.00 39.95 1.75
2800 4065 7.014711 TCGACTGAGATTTAGCAATCCTAATCT 59.985 37.037 0.00 0.00 39.95 2.40
2801 4066 8.300286 CGACTGAGATTTAGCAATCCTAATCTA 58.700 37.037 0.00 0.00 39.95 1.98
2802 4067 9.638239 GACTGAGATTTAGCAATCCTAATCTAG 57.362 37.037 0.00 0.00 39.95 2.43
2803 4068 9.153479 ACTGAGATTTAGCAATCCTAATCTAGT 57.847 33.333 0.00 0.00 39.95 2.57
2804 4069 9.995003 CTGAGATTTAGCAATCCTAATCTAGTT 57.005 33.333 0.00 0.00 39.95 2.24
2807 4072 9.785982 AGATTTAGCAATCCTAATCTAGTTTCC 57.214 33.333 0.00 0.00 39.95 3.13
2808 4073 8.608844 ATTTAGCAATCCTAATCTAGTTTCCG 57.391 34.615 0.00 0.00 36.00 4.30
2809 4074 4.381411 AGCAATCCTAATCTAGTTTCCGC 58.619 43.478 0.00 0.00 0.00 5.54
2810 4075 3.184581 GCAATCCTAATCTAGTTTCCGCG 59.815 47.826 0.00 0.00 0.00 6.46
2811 4076 3.662247 ATCCTAATCTAGTTTCCGCGG 57.338 47.619 22.12 22.12 0.00 6.46
2812 4077 1.068127 TCCTAATCTAGTTTCCGCGGC 59.932 52.381 23.51 6.72 0.00 6.53
2813 4078 1.499049 CTAATCTAGTTTCCGCGGCC 58.501 55.000 23.51 10.97 0.00 6.13
2814 4079 1.068741 CTAATCTAGTTTCCGCGGCCT 59.931 52.381 23.51 18.10 0.00 5.19
2815 4080 0.179081 AATCTAGTTTCCGCGGCCTC 60.179 55.000 23.51 12.70 0.00 4.70
2816 4081 1.043673 ATCTAGTTTCCGCGGCCTCT 61.044 55.000 23.51 19.28 0.00 3.69
2817 4082 0.394762 TCTAGTTTCCGCGGCCTCTA 60.395 55.000 23.51 19.36 0.00 2.43
2818 4083 0.248949 CTAGTTTCCGCGGCCTCTAC 60.249 60.000 23.51 13.13 0.00 2.59
2819 4084 1.669999 TAGTTTCCGCGGCCTCTACC 61.670 60.000 23.51 3.37 0.00 3.18
2820 4085 3.777910 TTTCCGCGGCCTCTACCC 61.778 66.667 23.51 0.00 0.00 3.69
2827 4092 4.477119 GGCCTCTACCCCCGTCCT 62.477 72.222 0.00 0.00 0.00 3.85
2828 4093 3.155167 GCCTCTACCCCCGTCCTG 61.155 72.222 0.00 0.00 0.00 3.86
2829 4094 2.444140 CCTCTACCCCCGTCCTGG 60.444 72.222 0.00 0.00 37.55 4.45
2830 4095 2.363361 CTCTACCCCCGTCCTGGT 59.637 66.667 0.00 0.00 38.69 4.00
2831 4096 2.038329 TCTACCCCCGTCCTGGTG 59.962 66.667 0.00 0.00 36.04 4.17
2832 4097 2.038329 CTACCCCCGTCCTGGTGA 59.962 66.667 0.00 0.00 36.04 4.02
2833 4098 2.038329 TACCCCCGTCCTGGTGAG 59.962 66.667 0.00 0.00 36.04 3.51
2834 4099 2.509931 CTACCCCCGTCCTGGTGAGA 62.510 65.000 0.00 0.00 36.04 3.27
2835 4100 2.096707 TACCCCCGTCCTGGTGAGAA 62.097 60.000 0.00 0.00 36.04 2.87
2836 4101 2.663196 CCCCGTCCTGGTGAGAAC 59.337 66.667 0.00 0.00 35.15 3.01
2837 4102 2.261671 CCCGTCCTGGTGAGAACG 59.738 66.667 0.00 0.00 35.15 3.95
2838 4103 2.571216 CCCGTCCTGGTGAGAACGT 61.571 63.158 4.49 0.00 35.15 3.99
2839 4104 1.366366 CCGTCCTGGTGAGAACGTT 59.634 57.895 0.00 0.00 33.45 3.99
2840 4105 0.666577 CCGTCCTGGTGAGAACGTTC 60.667 60.000 20.71 20.71 33.45 3.95
2841 4106 0.031585 CGTCCTGGTGAGAACGTTCA 59.968 55.000 28.78 8.56 0.00 3.18
2842 4107 1.336887 CGTCCTGGTGAGAACGTTCAT 60.337 52.381 28.78 14.60 0.00 2.57
2843 4108 2.069273 GTCCTGGTGAGAACGTTCATG 58.931 52.381 28.78 11.86 0.00 3.07
2844 4109 1.001974 TCCTGGTGAGAACGTTCATGG 59.998 52.381 28.78 18.96 0.00 3.66
2845 4110 1.270839 CCTGGTGAGAACGTTCATGGT 60.271 52.381 28.78 9.31 0.00 3.55
2846 4111 1.800586 CTGGTGAGAACGTTCATGGTG 59.199 52.381 28.78 11.12 0.00 4.17
2847 4112 1.140052 TGGTGAGAACGTTCATGGTGT 59.860 47.619 28.78 8.14 0.00 4.16
2848 4113 1.531149 GGTGAGAACGTTCATGGTGTG 59.469 52.381 28.78 0.00 0.00 3.82
2849 4114 2.479837 GTGAGAACGTTCATGGTGTGA 58.520 47.619 28.78 0.00 34.25 3.58
2850 4115 2.221055 GTGAGAACGTTCATGGTGTGAC 59.779 50.000 28.78 8.76 36.32 3.67
2856 4121 2.019408 TTCATGGTGTGACGCGACG 61.019 57.895 15.93 0.00 36.32 5.12
2867 4132 0.730155 GACGCGACGTGGTTGACATA 60.730 55.000 15.93 0.00 41.37 2.29
2889 4154 1.771854 GGGGTTTTGGTCCCACAAATT 59.228 47.619 3.37 0.00 46.26 1.82
2892 4157 3.371059 GGGTTTTGGTCCCACAAATTGTT 60.371 43.478 0.00 0.00 44.05 2.83
2893 4158 3.625313 GGTTTTGGTCCCACAAATTGTTG 59.375 43.478 0.00 0.00 39.80 3.33
2895 4160 2.166907 TGGTCCCACAAATTGTTGGT 57.833 45.000 14.76 0.00 39.22 3.67
2901 4166 2.484594 CCCACAAATTGTTGGTTCACCC 60.485 50.000 7.97 0.00 39.22 4.61
2905 4170 0.387565 AATTGTTGGTTCACCCGTGC 59.612 50.000 0.00 0.00 35.15 5.34
2910 4175 1.668101 TTGGTTCACCCGTGCAAACC 61.668 55.000 8.50 8.50 37.73 3.27
2911 4176 1.826487 GGTTCACCCGTGCAAACCT 60.826 57.895 8.23 0.00 35.66 3.50
2931 4196 4.708421 ACCTACGGAGAATGCTACACTTAA 59.292 41.667 0.00 0.00 0.00 1.85
2941 4206 5.959618 ATGCTACACTTAAGGGTTGTTTC 57.040 39.130 17.11 2.22 0.00 2.78
2942 4207 4.139038 TGCTACACTTAAGGGTTGTTTCC 58.861 43.478 17.11 1.86 0.00 3.13
2945 4210 1.950909 CACTTAAGGGTTGTTTCCGCA 59.049 47.619 7.53 0.00 0.00 5.69
2947 4212 0.945813 TTAAGGGTTGTTTCCGCACG 59.054 50.000 0.00 0.00 0.00 5.34
2949 4214 2.592287 GGGTTGTTTCCGCACGGA 60.592 61.111 7.89 7.89 43.52 4.69
2974 4239 7.625828 AGTAGTTATGGGCTGAATTGTAAAC 57.374 36.000 0.00 0.00 0.00 2.01
2988 4253 6.769822 TGAATTGTAAACCTACGGTTGGTTAA 59.230 34.615 23.73 16.13 46.20 2.01
2991 4256 4.455190 TGTAAACCTACGGTTGGTTAATGC 59.545 41.667 23.73 14.75 46.20 3.56
2995 4260 2.617021 CCTACGGTTGGTTAATGCTGGT 60.617 50.000 0.08 0.00 0.00 4.00
2996 4261 1.243902 ACGGTTGGTTAATGCTGGTG 58.756 50.000 0.00 0.00 0.00 4.17
2997 4262 1.243902 CGGTTGGTTAATGCTGGTGT 58.756 50.000 0.00 0.00 0.00 4.16
2998 4263 2.224572 ACGGTTGGTTAATGCTGGTGTA 60.225 45.455 0.00 0.00 0.00 2.90
2999 4264 2.418628 CGGTTGGTTAATGCTGGTGTAG 59.581 50.000 0.00 0.00 0.00 2.74
3000 4265 3.418047 GGTTGGTTAATGCTGGTGTAGT 58.582 45.455 0.00 0.00 0.00 2.73
3001 4266 3.824443 GGTTGGTTAATGCTGGTGTAGTT 59.176 43.478 0.00 0.00 0.00 2.24
3002 4267 4.082949 GGTTGGTTAATGCTGGTGTAGTTC 60.083 45.833 0.00 0.00 0.00 3.01
3003 4268 4.359434 TGGTTAATGCTGGTGTAGTTCA 57.641 40.909 0.00 0.00 0.00 3.18
3004 4269 4.917385 TGGTTAATGCTGGTGTAGTTCAT 58.083 39.130 0.00 0.00 0.00 2.57
3005 4270 5.321102 TGGTTAATGCTGGTGTAGTTCATT 58.679 37.500 0.00 0.00 0.00 2.57
3006 4271 5.772672 TGGTTAATGCTGGTGTAGTTCATTT 59.227 36.000 0.00 0.00 0.00 2.32
3007 4272 6.266558 TGGTTAATGCTGGTGTAGTTCATTTT 59.733 34.615 0.00 0.00 0.00 1.82
3008 4273 6.806739 GGTTAATGCTGGTGTAGTTCATTTTC 59.193 38.462 0.00 0.00 0.00 2.29
3009 4274 7.309194 GGTTAATGCTGGTGTAGTTCATTTTCT 60.309 37.037 0.00 0.00 0.00 2.52
3010 4275 5.633830 ATGCTGGTGTAGTTCATTTTCTG 57.366 39.130 0.00 0.00 0.00 3.02
3011 4276 3.253188 TGCTGGTGTAGTTCATTTTCTGC 59.747 43.478 0.00 0.00 0.00 4.26
3012 4277 3.503748 GCTGGTGTAGTTCATTTTCTGCT 59.496 43.478 0.00 0.00 0.00 4.24
3013 4278 4.695455 GCTGGTGTAGTTCATTTTCTGCTA 59.305 41.667 0.00 0.00 0.00 3.49
3014 4279 5.181245 GCTGGTGTAGTTCATTTTCTGCTAA 59.819 40.000 0.00 0.00 0.00 3.09
3015 4280 6.127897 GCTGGTGTAGTTCATTTTCTGCTAAT 60.128 38.462 0.00 0.00 0.00 1.73
3016 4281 7.575720 GCTGGTGTAGTTCATTTTCTGCTAATT 60.576 37.037 0.00 0.00 0.00 1.40
3017 4282 7.592938 TGGTGTAGTTCATTTTCTGCTAATTG 58.407 34.615 0.00 0.00 0.00 2.32
3018 4283 7.230510 TGGTGTAGTTCATTTTCTGCTAATTGT 59.769 33.333 0.00 0.00 0.00 2.71
3019 4284 8.726988 GGTGTAGTTCATTTTCTGCTAATTGTA 58.273 33.333 0.00 0.00 0.00 2.41
3024 4289 8.860088 AGTTCATTTTCTGCTAATTGTAAACCT 58.140 29.630 0.00 0.00 0.00 3.50
3027 4292 8.447833 TCATTTTCTGCTAATTGTAAACCTACG 58.552 33.333 0.00 0.00 0.00 3.51
3028 4293 6.730960 TTTCTGCTAATTGTAAACCTACGG 57.269 37.500 0.00 0.00 0.00 4.02
3029 4294 5.410355 TCTGCTAATTGTAAACCTACGGT 57.590 39.130 0.00 0.00 37.65 4.83
3031 4296 5.640357 TCTGCTAATTGTAAACCTACGGTTG 59.360 40.000 0.00 0.00 46.20 3.77
3032 4297 4.696402 TGCTAATTGTAAACCTACGGTTGG 59.304 41.667 7.08 7.08 46.20 3.77
3033 4298 4.696877 GCTAATTGTAAACCTACGGTTGGT 59.303 41.667 8.50 8.50 46.20 3.67
3034 4299 5.181811 GCTAATTGTAAACCTACGGTTGGTT 59.818 40.000 19.14 19.14 46.20 3.67
3035 4300 6.371271 GCTAATTGTAAACCTACGGTTGGTTA 59.629 38.462 23.73 11.30 46.20 2.85
3036 4301 7.094848 GCTAATTGTAAACCTACGGTTGGTTAA 60.095 37.037 23.73 16.13 46.20 2.01
3037 4302 7.764141 AATTGTAAACCTACGGTTGGTTAAT 57.236 32.000 23.73 17.39 46.20 1.40
3038 4303 6.557291 TTGTAAACCTACGGTTGGTTAATG 57.443 37.500 23.73 0.00 46.20 1.90
3039 4304 4.455190 TGTAAACCTACGGTTGGTTAATGC 59.545 41.667 23.73 14.75 46.20 3.56
3040 4305 3.428413 AACCTACGGTTGGTTAATGCT 57.572 42.857 22.52 0.74 45.07 3.79
3041 4306 4.556592 AACCTACGGTTGGTTAATGCTA 57.443 40.909 22.52 0.00 45.07 3.49
3042 4307 3.865446 ACCTACGGTTGGTTAATGCTAC 58.135 45.455 8.50 0.00 33.34 3.58
3043 4308 3.261390 ACCTACGGTTGGTTAATGCTACA 59.739 43.478 8.50 0.00 33.34 2.74
3044 4309 3.619929 CCTACGGTTGGTTAATGCTACAC 59.380 47.826 0.08 0.00 0.00 2.90
3045 4310 3.128852 ACGGTTGGTTAATGCTACACA 57.871 42.857 0.00 0.00 0.00 3.72
3046 4311 3.681593 ACGGTTGGTTAATGCTACACAT 58.318 40.909 0.00 0.00 42.30 3.21
3047 4312 4.834534 ACGGTTGGTTAATGCTACACATA 58.165 39.130 0.00 0.00 38.34 2.29
3048 4313 4.632688 ACGGTTGGTTAATGCTACACATAC 59.367 41.667 0.00 0.00 38.34 2.39
3049 4314 4.632251 CGGTTGGTTAATGCTACACATACA 59.368 41.667 0.00 0.00 38.34 2.29
3050 4315 5.122554 CGGTTGGTTAATGCTACACATACAA 59.877 40.000 0.00 0.00 38.34 2.41
3051 4316 6.348622 CGGTTGGTTAATGCTACACATACAAA 60.349 38.462 0.00 0.00 38.34 2.83
3052 4317 7.371936 GGTTGGTTAATGCTACACATACAAAA 58.628 34.615 0.00 0.00 38.34 2.44
3053 4318 7.540745 GGTTGGTTAATGCTACACATACAAAAG 59.459 37.037 0.00 0.00 38.34 2.27
3054 4319 7.151999 TGGTTAATGCTACACATACAAAAGG 57.848 36.000 0.00 0.00 38.34 3.11
3055 4320 6.943146 TGGTTAATGCTACACATACAAAAGGA 59.057 34.615 0.00 0.00 38.34 3.36
3056 4321 7.613801 TGGTTAATGCTACACATACAAAAGGAT 59.386 33.333 0.00 0.00 38.34 3.24
3057 4322 9.116067 GGTTAATGCTACACATACAAAAGGATA 57.884 33.333 0.00 0.00 38.34 2.59
3058 4323 9.931210 GTTAATGCTACACATACAAAAGGATAC 57.069 33.333 0.00 0.00 38.34 2.24
3059 4324 9.674068 TTAATGCTACACATACAAAAGGATACA 57.326 29.630 0.00 0.00 38.34 2.29
3060 4325 8.752005 AATGCTACACATACAAAAGGATACAT 57.248 30.769 0.00 0.00 38.34 2.29
3061 4326 7.552458 TGCTACACATACAAAAGGATACATG 57.448 36.000 0.00 0.00 41.41 3.21
3062 4327 6.038161 TGCTACACATACAAAAGGATACATGC 59.962 38.462 0.00 0.00 41.41 4.06
3063 4328 6.260936 GCTACACATACAAAAGGATACATGCT 59.739 38.462 0.00 0.00 41.41 3.79
3064 4329 7.201732 GCTACACATACAAAAGGATACATGCTT 60.202 37.037 0.00 0.00 40.34 3.91
3076 4341 8.823220 AAGGATACATGCTTTTACATAAAGGT 57.177 30.769 0.00 0.00 34.65 3.50
3077 4342 8.225603 AGGATACATGCTTTTACATAAAGGTG 57.774 34.615 0.00 0.00 41.41 4.00
3078 4343 7.285401 AGGATACATGCTTTTACATAAAGGTGG 59.715 37.037 0.00 0.00 41.41 4.61
3079 4344 5.659440 ACATGCTTTTACATAAAGGTGGG 57.341 39.130 0.00 0.00 0.00 4.61
3080 4345 5.083821 ACATGCTTTTACATAAAGGTGGGT 58.916 37.500 0.00 0.00 0.00 4.51
3081 4346 5.542251 ACATGCTTTTACATAAAGGTGGGTT 59.458 36.000 0.00 0.00 0.00 4.11
3082 4347 6.042666 ACATGCTTTTACATAAAGGTGGGTTT 59.957 34.615 0.00 0.00 0.00 3.27
3083 4348 6.487299 TGCTTTTACATAAAGGTGGGTTTT 57.513 33.333 0.00 0.00 0.00 2.43
3084 4349 6.284459 TGCTTTTACATAAAGGTGGGTTTTG 58.716 36.000 0.00 0.00 0.00 2.44
3085 4350 6.098409 TGCTTTTACATAAAGGTGGGTTTTGA 59.902 34.615 0.00 0.00 0.00 2.69
3086 4351 7.158697 GCTTTTACATAAAGGTGGGTTTTGAT 58.841 34.615 0.00 0.00 0.00 2.57
3087 4352 7.659799 GCTTTTACATAAAGGTGGGTTTTGATT 59.340 33.333 0.00 0.00 0.00 2.57
3088 4353 8.894768 TTTTACATAAAGGTGGGTTTTGATTG 57.105 30.769 0.00 0.00 0.00 2.67
3089 4354 7.841282 TTACATAAAGGTGGGTTTTGATTGA 57.159 32.000 0.00 0.00 0.00 2.57
3090 4355 6.739331 ACATAAAGGTGGGTTTTGATTGAA 57.261 33.333 0.00 0.00 0.00 2.69
3091 4356 6.758254 ACATAAAGGTGGGTTTTGATTGAAG 58.242 36.000 0.00 0.00 0.00 3.02
3092 4357 6.553100 ACATAAAGGTGGGTTTTGATTGAAGA 59.447 34.615 0.00 0.00 0.00 2.87
3093 4358 7.235399 ACATAAAGGTGGGTTTTGATTGAAGAT 59.765 33.333 0.00 0.00 0.00 2.40
3094 4359 6.499106 AAAGGTGGGTTTTGATTGAAGATT 57.501 33.333 0.00 0.00 0.00 2.40
3095 4360 7.610580 AAAGGTGGGTTTTGATTGAAGATTA 57.389 32.000 0.00 0.00 0.00 1.75
3096 4361 7.610580 AAGGTGGGTTTTGATTGAAGATTAA 57.389 32.000 0.00 0.00 0.00 1.40
3097 4362 7.232118 AGGTGGGTTTTGATTGAAGATTAAG 57.768 36.000 0.00 0.00 0.00 1.85
3098 4363 6.211384 AGGTGGGTTTTGATTGAAGATTAAGG 59.789 38.462 0.00 0.00 0.00 2.69
3099 4364 6.398095 GTGGGTTTTGATTGAAGATTAAGGG 58.602 40.000 0.00 0.00 0.00 3.95
3100 4365 5.483583 TGGGTTTTGATTGAAGATTAAGGGG 59.516 40.000 0.00 0.00 0.00 4.79
3101 4366 5.104941 GGGTTTTGATTGAAGATTAAGGGGG 60.105 44.000 0.00 0.00 0.00 5.40
3102 4367 5.719563 GGTTTTGATTGAAGATTAAGGGGGA 59.280 40.000 0.00 0.00 0.00 4.81
3103 4368 6.127338 GGTTTTGATTGAAGATTAAGGGGGAG 60.127 42.308 0.00 0.00 0.00 4.30
3104 4369 6.401537 TTTGATTGAAGATTAAGGGGGAGA 57.598 37.500 0.00 0.00 0.00 3.71
3105 4370 6.596869 TTGATTGAAGATTAAGGGGGAGAT 57.403 37.500 0.00 0.00 0.00 2.75
3106 4371 5.945310 TGATTGAAGATTAAGGGGGAGATG 58.055 41.667 0.00 0.00 0.00 2.90
3107 4372 4.796110 TTGAAGATTAAGGGGGAGATGG 57.204 45.455 0.00 0.00 0.00 3.51
3108 4373 3.056080 TGAAGATTAAGGGGGAGATGGG 58.944 50.000 0.00 0.00 0.00 4.00
3109 4374 2.140098 AGATTAAGGGGGAGATGGGG 57.860 55.000 0.00 0.00 0.00 4.96
3110 4375 0.405973 GATTAAGGGGGAGATGGGGC 59.594 60.000 0.00 0.00 0.00 5.80
3111 4376 1.074296 ATTAAGGGGGAGATGGGGCC 61.074 60.000 0.00 0.00 0.00 5.80
3112 4377 3.749947 TAAGGGGGAGATGGGGCCC 62.750 68.421 18.17 18.17 43.91 5.80
3127 4392 1.337384 GGCCCACCCCCATGAAAATC 61.337 60.000 0.00 0.00 0.00 2.17
3128 4393 0.617249 GCCCACCCCCATGAAAATCA 60.617 55.000 0.00 0.00 0.00 2.57
3129 4394 1.488390 CCCACCCCCATGAAAATCAG 58.512 55.000 0.00 0.00 0.00 2.90
3130 4395 1.488390 CCACCCCCATGAAAATCAGG 58.512 55.000 0.00 0.00 0.00 3.86
3155 4420 6.378661 GGGGGAGAGGTTAGTTAGTTTAAA 57.621 41.667 0.00 0.00 0.00 1.52
3157 4422 7.233632 GGGGGAGAGGTTAGTTAGTTTAAAAA 58.766 38.462 0.00 0.00 0.00 1.94
3158 4423 7.392673 GGGGGAGAGGTTAGTTAGTTTAAAAAG 59.607 40.741 0.00 0.00 0.00 2.27
3159 4424 8.159447 GGGGAGAGGTTAGTTAGTTTAAAAAGA 58.841 37.037 0.00 0.00 0.00 2.52
3160 4425 9.736414 GGGAGAGGTTAGTTAGTTTAAAAAGAT 57.264 33.333 0.00 0.00 0.00 2.40
3173 4438 8.608844 AGTTTAAAAAGATCCTAGTCAGTGTG 57.391 34.615 0.00 0.00 0.00 3.82
3174 4439 8.211629 AGTTTAAAAAGATCCTAGTCAGTGTGT 58.788 33.333 0.00 0.00 0.00 3.72
3175 4440 9.485206 GTTTAAAAAGATCCTAGTCAGTGTGTA 57.515 33.333 0.00 0.00 0.00 2.90
3178 4443 8.974060 AAAAAGATCCTAGTCAGTGTGTAAAA 57.026 30.769 0.00 0.00 0.00 1.52
3180 4445 5.725362 AGATCCTAGTCAGTGTGTAAAAGC 58.275 41.667 0.00 0.00 0.00 3.51
3181 4446 4.948341 TCCTAGTCAGTGTGTAAAAGCA 57.052 40.909 0.00 0.00 0.00 3.91
3182 4447 5.483685 TCCTAGTCAGTGTGTAAAAGCAT 57.516 39.130 0.00 0.00 0.00 3.79
3183 4448 5.237815 TCCTAGTCAGTGTGTAAAAGCATG 58.762 41.667 0.00 0.00 0.00 4.06
3184 4449 4.997395 CCTAGTCAGTGTGTAAAAGCATGT 59.003 41.667 0.00 0.00 0.00 3.21
3187 4452 6.935741 AGTCAGTGTGTAAAAGCATGTAAA 57.064 33.333 0.00 0.00 0.00 2.01
3188 4453 6.725246 AGTCAGTGTGTAAAAGCATGTAAAC 58.275 36.000 0.00 0.00 0.00 2.01
3189 4454 5.912955 GTCAGTGTGTAAAAGCATGTAAACC 59.087 40.000 0.00 0.00 0.00 3.27
3190 4455 5.825679 TCAGTGTGTAAAAGCATGTAAACCT 59.174 36.000 0.00 0.00 0.00 3.50
3193 4458 6.978080 AGTGTGTAAAAGCATGTAAACCTTTG 59.022 34.615 0.00 0.00 0.00 2.77
3195 4460 7.916450 GTGTGTAAAAGCATGTAAACCTTTGTA 59.084 33.333 0.00 0.00 0.00 2.41
3196 4461 8.634444 TGTGTAAAAGCATGTAAACCTTTGTAT 58.366 29.630 0.00 0.00 0.00 2.29
3197 4462 8.911662 GTGTAAAAGCATGTAAACCTTTGTATG 58.088 33.333 0.00 0.00 0.00 2.39
3198 4463 8.634444 TGTAAAAGCATGTAAACCTTTGTATGT 58.366 29.630 0.00 0.00 0.00 2.29
3199 4464 9.471084 GTAAAAGCATGTAAACCTTTGTATGTT 57.529 29.630 0.00 0.00 0.00 2.71
3200 4465 8.956533 AAAAGCATGTAAACCTTTGTATGTTT 57.043 26.923 0.00 0.00 38.22 2.83
3204 4469 7.040062 AGCATGTAAACCTTTGTATGTTTAGCA 60.040 33.333 0.00 0.00 37.55 3.49
3234 4499 4.481930 TTTTAGTGAACATCCAACTGCG 57.518 40.909 0.00 0.00 0.00 5.18
3235 4500 2.831685 TAGTGAACATCCAACTGCGT 57.168 45.000 0.00 0.00 0.00 5.24
3236 4501 1.967319 AGTGAACATCCAACTGCGTT 58.033 45.000 0.00 0.00 0.00 4.84
3238 4503 1.601903 GTGAACATCCAACTGCGTTGA 59.398 47.619 18.69 8.62 45.28 3.18
3239 4504 2.226437 GTGAACATCCAACTGCGTTGAT 59.774 45.455 18.69 10.05 45.28 2.57
3240 4505 3.435327 GTGAACATCCAACTGCGTTGATA 59.565 43.478 18.69 9.65 45.28 2.15
3241 4506 4.068599 TGAACATCCAACTGCGTTGATAA 58.931 39.130 18.69 7.78 45.28 1.75
3242 4507 4.517075 TGAACATCCAACTGCGTTGATAAA 59.483 37.500 18.69 5.92 45.28 1.40
3243 4508 4.419522 ACATCCAACTGCGTTGATAAAC 57.580 40.909 18.69 0.00 45.28 2.01
3244 4509 3.190535 ACATCCAACTGCGTTGATAAACC 59.809 43.478 18.69 0.00 45.28 3.27
3245 4510 3.134574 TCCAACTGCGTTGATAAACCT 57.865 42.857 18.69 0.00 45.28 3.50
3246 4511 4.274602 TCCAACTGCGTTGATAAACCTA 57.725 40.909 18.69 0.00 45.28 3.08
3247 4512 4.839121 TCCAACTGCGTTGATAAACCTAT 58.161 39.130 18.69 0.00 45.28 2.57
3248 4513 5.979993 TCCAACTGCGTTGATAAACCTATA 58.020 37.500 18.69 0.00 45.28 1.31
3249 4514 6.408035 TCCAACTGCGTTGATAAACCTATAA 58.592 36.000 18.69 0.00 45.28 0.98
3250 4515 6.537301 TCCAACTGCGTTGATAAACCTATAAG 59.463 38.462 18.69 2.64 45.28 1.73
3251 4516 6.537301 CCAACTGCGTTGATAAACCTATAAGA 59.463 38.462 18.69 0.00 45.28 2.10
3252 4517 7.254455 CCAACTGCGTTGATAAACCTATAAGAG 60.254 40.741 18.69 0.00 45.28 2.85
3253 4518 6.875076 ACTGCGTTGATAAACCTATAAGAGT 58.125 36.000 0.00 0.00 0.00 3.24
3255 4520 7.919621 ACTGCGTTGATAAACCTATAAGAGTAC 59.080 37.037 0.00 0.00 0.00 2.73
3256 4521 7.774134 TGCGTTGATAAACCTATAAGAGTACA 58.226 34.615 0.00 0.00 0.00 2.90
3257 4522 8.418662 TGCGTTGATAAACCTATAAGAGTACAT 58.581 33.333 0.00 0.00 0.00 2.29
3258 4523 8.913656 GCGTTGATAAACCTATAAGAGTACATC 58.086 37.037 0.00 0.00 0.00 3.06
3259 4524 9.961265 CGTTGATAAACCTATAAGAGTACATCA 57.039 33.333 0.00 0.00 0.00 3.07
3262 4527 9.656323 TGATAAACCTATAAGAGTACATCAGGT 57.344 33.333 0.00 0.00 36.49 4.00
3264 4529 7.973048 AAACCTATAAGAGTACATCAGGTCA 57.027 36.000 0.00 0.00 33.87 4.02
3265 4530 7.973048 AACCTATAAGAGTACATCAGGTCAA 57.027 36.000 0.00 0.00 33.87 3.18
3267 4532 8.375493 ACCTATAAGAGTACATCAGGTCAAAA 57.625 34.615 0.00 0.00 28.84 2.44
3268 4533 8.822805 ACCTATAAGAGTACATCAGGTCAAAAA 58.177 33.333 0.00 0.00 28.84 1.94
3296 4561 3.885484 ACAAGAACAGATGACAAAGCG 57.115 42.857 0.00 0.00 0.00 4.68
3297 4562 3.466836 ACAAGAACAGATGACAAAGCGA 58.533 40.909 0.00 0.00 0.00 4.93
3298 4563 3.496130 ACAAGAACAGATGACAAAGCGAG 59.504 43.478 0.00 0.00 0.00 5.03
3299 4564 2.072298 AGAACAGATGACAAAGCGAGC 58.928 47.619 0.00 0.00 0.00 5.03
3300 4565 1.800586 GAACAGATGACAAAGCGAGCA 59.199 47.619 0.00 0.00 0.00 4.26
3301 4566 1.882912 ACAGATGACAAAGCGAGCAA 58.117 45.000 0.00 0.00 0.00 3.91
3302 4567 1.532868 ACAGATGACAAAGCGAGCAAC 59.467 47.619 0.00 0.00 0.00 4.17
3303 4568 1.532437 CAGATGACAAAGCGAGCAACA 59.468 47.619 0.00 0.00 0.00 3.33
3304 4569 2.031769 CAGATGACAAAGCGAGCAACAA 60.032 45.455 0.00 0.00 0.00 2.83
3305 4570 2.031682 AGATGACAAAGCGAGCAACAAC 60.032 45.455 0.00 0.00 0.00 3.32
3306 4571 0.027455 TGACAAAGCGAGCAACAACG 59.973 50.000 0.00 0.00 0.00 4.10
3312 4577 3.645975 CGAGCAACAACGCCCGTT 61.646 61.111 0.00 0.00 39.13 4.44
3313 4578 2.251371 GAGCAACAACGCCCGTTC 59.749 61.111 2.68 0.00 36.00 3.95
3314 4579 2.515057 AGCAACAACGCCCGTTCA 60.515 55.556 2.68 0.00 36.00 3.18
3327 4592 0.037232 CCGTTCACTCCTTCCCTCAC 60.037 60.000 0.00 0.00 0.00 3.51
3330 4595 1.700186 GTTCACTCCTTCCCTCACCTT 59.300 52.381 0.00 0.00 0.00 3.50
3333 4598 1.301293 CTCCTTCCCTCACCTTGCC 59.699 63.158 0.00 0.00 0.00 4.52
3334 4599 1.463214 TCCTTCCCTCACCTTGCCA 60.463 57.895 0.00 0.00 0.00 4.92
3337 4602 0.038744 CTTCCCTCACCTTGCCATGT 59.961 55.000 0.00 0.00 0.00 3.21
3341 4606 0.037303 CCTCACCTTGCCATGTCTGT 59.963 55.000 0.00 0.00 0.00 3.41
3342 4607 1.446907 CTCACCTTGCCATGTCTGTC 58.553 55.000 0.00 0.00 0.00 3.51
3345 4610 2.401766 CCTTGCCATGTCTGTCCGC 61.402 63.158 0.00 0.00 0.00 5.54
3382 4647 0.319040 CCATGACGAGCCGACCTATG 60.319 60.000 0.00 0.00 0.00 2.23
3510 4775 1.758936 CATTCATGCAGAGAAGGCCA 58.241 50.000 5.01 0.00 0.00 5.36
3511 4776 2.097036 CATTCATGCAGAGAAGGCCAA 58.903 47.619 5.01 0.00 0.00 4.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
181 182 4.719369 GGCGTGGCTTCGTCGTCT 62.719 66.667 0.00 0.00 0.00 4.18
477 486 3.327404 TTCCCCTTCCCTGCCGTC 61.327 66.667 0.00 0.00 0.00 4.79
478 487 3.330720 CTTCCCCTTCCCTGCCGT 61.331 66.667 0.00 0.00 0.00 5.68
479 488 4.115199 CCTTCCCCTTCCCTGCCG 62.115 72.222 0.00 0.00 0.00 5.69
480 489 3.744155 CCCTTCCCCTTCCCTGCC 61.744 72.222 0.00 0.00 0.00 4.85
481 490 4.448976 GCCCTTCCCCTTCCCTGC 62.449 72.222 0.00 0.00 0.00 4.85
482 491 4.115199 CGCCCTTCCCCTTCCCTG 62.115 72.222 0.00 0.00 0.00 4.45
485 494 3.097162 ATCCGCCCTTCCCCTTCC 61.097 66.667 0.00 0.00 0.00 3.46
486 495 2.511403 GATCCGCCCTTCCCCTTC 59.489 66.667 0.00 0.00 0.00 3.46
487 496 3.480133 CGATCCGCCCTTCCCCTT 61.480 66.667 0.00 0.00 0.00 3.95
488 497 4.475444 TCGATCCGCCCTTCCCCT 62.475 66.667 0.00 0.00 0.00 4.79
489 498 4.237207 GTCGATCCGCCCTTCCCC 62.237 72.222 0.00 0.00 0.00 4.81
490 499 4.587189 CGTCGATCCGCCCTTCCC 62.587 72.222 0.00 0.00 0.00 3.97
498 507 4.965858 GCTCTCGGCGTCGATCCG 62.966 72.222 14.65 19.14 45.04 4.18
499 508 3.815569 CTGCTCTCGGCGTCGATCC 62.816 68.421 14.65 4.75 45.04 3.36
500 509 2.352915 CTGCTCTCGGCGTCGATC 60.353 66.667 14.65 6.02 45.04 3.69
501 510 4.560856 GCTGCTCTCGGCGTCGAT 62.561 66.667 14.65 0.00 45.04 3.59
557 566 3.707189 TCCCCTCCCCCTCCTTCC 61.707 72.222 0.00 0.00 0.00 3.46
558 567 2.040359 CTCCCCTCCCCCTCCTTC 60.040 72.222 0.00 0.00 0.00 3.46
559 568 3.711782 CCTCCCCTCCCCCTCCTT 61.712 72.222 0.00 0.00 0.00 3.36
560 569 4.761304 TCCTCCCCTCCCCCTCCT 62.761 72.222 0.00 0.00 0.00 3.69
561 570 4.179599 CTCCTCCCCTCCCCCTCC 62.180 77.778 0.00 0.00 0.00 4.30
562 571 4.179599 CCTCCTCCCCTCCCCCTC 62.180 77.778 0.00 0.00 0.00 4.30
586 595 4.237207 GATCCGGCCGTTCCTCCC 62.237 72.222 26.12 1.68 0.00 4.30
587 596 4.237207 GGATCCGGCCGTTCCTCC 62.237 72.222 28.23 21.48 0.00 4.30
588 597 4.587189 CGGATCCGGCCGTTCCTC 62.587 72.222 30.54 19.15 46.07 3.71
677 686 4.009015 CCAAAGCTCTGGCCCTTC 57.991 61.111 0.00 0.00 39.73 3.46
688 697 2.356194 CCGTGCCAAAGCCAAAGC 60.356 61.111 0.00 0.00 38.69 3.51
689 698 2.339712 CCCGTGCCAAAGCCAAAG 59.660 61.111 0.00 0.00 38.69 2.77
690 699 3.922640 GCCCGTGCCAAAGCCAAA 61.923 61.111 0.00 0.00 38.69 3.28
694 703 3.438017 TTTGTGCCCGTGCCAAAGC 62.438 57.895 3.25 0.00 34.71 3.51
695 704 1.591327 GTTTGTGCCCGTGCCAAAG 60.591 57.895 6.73 0.00 37.90 2.77
696 705 2.496817 GTTTGTGCCCGTGCCAAA 59.503 55.556 3.25 3.25 36.18 3.28
697 706 3.532155 GGTTTGTGCCCGTGCCAA 61.532 61.111 0.00 0.00 36.33 4.52
700 709 4.025401 CTCGGTTTGTGCCCGTGC 62.025 66.667 0.00 0.00 45.63 5.34
701 710 1.234615 AATCTCGGTTTGTGCCCGTG 61.235 55.000 0.00 0.00 45.63 4.94
702 711 0.322322 TAATCTCGGTTTGTGCCCGT 59.678 50.000 0.00 0.00 45.63 5.28
703 712 1.006832 CTAATCTCGGTTTGTGCCCG 58.993 55.000 0.00 0.00 46.83 6.13
704 713 1.737793 CACTAATCTCGGTTTGTGCCC 59.262 52.381 0.00 0.00 30.54 5.36
707 716 3.325870 TGAGCACTAATCTCGGTTTGTG 58.674 45.455 1.05 1.05 37.70 3.33
708 717 3.678056 TGAGCACTAATCTCGGTTTGT 57.322 42.857 0.00 0.00 33.41 2.83
709 718 4.872691 AGAATGAGCACTAATCTCGGTTTG 59.127 41.667 0.00 0.00 33.41 2.93
710 719 5.091261 AGAATGAGCACTAATCTCGGTTT 57.909 39.130 0.00 0.00 33.41 3.27
711 720 4.160439 TGAGAATGAGCACTAATCTCGGTT 59.840 41.667 0.00 0.00 39.45 4.44
712 721 3.701542 TGAGAATGAGCACTAATCTCGGT 59.298 43.478 0.00 0.00 39.45 4.69
713 722 4.313277 TGAGAATGAGCACTAATCTCGG 57.687 45.455 0.00 0.00 39.45 4.63
714 723 6.653273 TTTTGAGAATGAGCACTAATCTCG 57.347 37.500 0.00 0.00 39.45 4.04
715 724 8.206325 TCATTTTGAGAATGAGCACTAATCTC 57.794 34.615 0.00 0.00 37.60 2.75
716 725 8.571461 TTCATTTTGAGAATGAGCACTAATCT 57.429 30.769 0.00 0.00 37.86 2.40
717 726 9.448294 GATTCATTTTGAGAATGAGCACTAATC 57.552 33.333 0.00 0.00 37.86 1.75
718 727 8.127327 CGATTCATTTTGAGAATGAGCACTAAT 58.873 33.333 0.00 0.00 37.86 1.73
719 728 7.466805 CGATTCATTTTGAGAATGAGCACTAA 58.533 34.615 0.00 0.00 37.86 2.24
720 729 6.457392 GCGATTCATTTTGAGAATGAGCACTA 60.457 38.462 0.00 0.00 37.86 2.74
721 730 5.675575 GCGATTCATTTTGAGAATGAGCACT 60.676 40.000 0.00 0.00 37.86 4.40
722 731 4.498323 GCGATTCATTTTGAGAATGAGCAC 59.502 41.667 0.00 0.00 37.86 4.40
723 732 4.397103 AGCGATTCATTTTGAGAATGAGCA 59.603 37.500 9.82 0.00 37.79 4.26
724 733 4.918037 AGCGATTCATTTTGAGAATGAGC 58.082 39.130 0.00 0.34 37.86 4.26
725 734 6.549061 TCAAGCGATTCATTTTGAGAATGAG 58.451 36.000 0.00 0.00 37.86 2.90
726 735 6.499234 TCAAGCGATTCATTTTGAGAATGA 57.501 33.333 0.00 0.00 35.93 2.57
727 736 7.751047 AATCAAGCGATTCATTTTGAGAATG 57.249 32.000 0.00 0.00 37.25 2.67
728 737 8.680903 ACTAATCAAGCGATTCATTTTGAGAAT 58.319 29.630 0.00 0.00 41.09 2.40
729 738 7.964559 CACTAATCAAGCGATTCATTTTGAGAA 59.035 33.333 0.00 0.00 41.09 2.87
730 739 7.466805 CACTAATCAAGCGATTCATTTTGAGA 58.533 34.615 0.00 0.00 41.09 3.27
731 740 6.195983 GCACTAATCAAGCGATTCATTTTGAG 59.804 38.462 0.00 0.00 41.09 3.02
732 741 6.029607 GCACTAATCAAGCGATTCATTTTGA 58.970 36.000 0.00 0.00 41.09 2.69
733 742 6.032094 AGCACTAATCAAGCGATTCATTTTG 58.968 36.000 0.00 0.00 41.09 2.44
734 743 6.199937 AGCACTAATCAAGCGATTCATTTT 57.800 33.333 0.00 0.00 41.09 1.82
735 744 5.824904 AGCACTAATCAAGCGATTCATTT 57.175 34.783 0.00 0.00 41.09 2.32
736 745 8.783833 ATATAGCACTAATCAAGCGATTCATT 57.216 30.769 0.00 0.00 41.09 2.57
737 746 8.783833 AATATAGCACTAATCAAGCGATTCAT 57.216 30.769 0.00 0.00 41.09 2.57
738 747 8.607441 AAATATAGCACTAATCAAGCGATTCA 57.393 30.769 0.00 0.00 41.09 2.57
741 750 9.929180 TCTTAAATATAGCACTAATCAAGCGAT 57.071 29.630 0.00 0.00 0.00 4.58
742 751 9.758651 TTCTTAAATATAGCACTAATCAAGCGA 57.241 29.630 0.00 0.00 0.00 4.93
796 805 3.000041 TCGTTTCGAGGATGAATGTTGG 59.000 45.455 0.00 0.00 0.00 3.77
797 806 4.661993 TTCGTTTCGAGGATGAATGTTG 57.338 40.909 2.47 0.00 37.14 3.33
803 812 2.592194 CTCGTTTCGTTTCGAGGATGA 58.408 47.619 14.26 0.00 46.26 2.92
816 825 7.637907 GTGATCTCATTAAAAGCATCTCGTTTC 59.362 37.037 0.00 0.00 0.00 2.78
822 831 6.656902 TGGAGTGATCTCATTAAAAGCATCT 58.343 36.000 0.00 0.00 42.05 2.90
839 848 2.727123 TTGCTCACCTTTTGGAGTGA 57.273 45.000 0.00 0.00 44.07 3.41
868 877 3.191669 CTCGTCACACCACACTTTGTTA 58.808 45.455 0.00 0.00 0.00 2.41
876 885 0.392706 AAGATGCTCGTCACACCACA 59.607 50.000 0.00 0.00 0.00 4.17
907 916 2.042831 GCATGGCCACTCACACCTC 61.043 63.158 8.16 0.00 0.00 3.85
989 1037 9.615295 GTTTCGATATTTATAGGAGTGAGAGAC 57.385 37.037 0.00 0.00 0.00 3.36
1127 1190 2.177518 TGAGGGTGGAGGAGGAGGT 61.178 63.158 0.00 0.00 0.00 3.85
1272 1335 1.202604 GGAGTTGAGGTTGTCGTTCCA 60.203 52.381 0.00 0.00 0.00 3.53
1466 1542 0.179468 ACACGGCGCCATAAAGGTAT 59.821 50.000 28.98 0.00 40.61 2.73
1467 1543 0.036199 AACACGGCGCCATAAAGGTA 60.036 50.000 28.98 0.00 40.61 3.08
1472 1548 1.807981 CGAGAACACGGCGCCATAA 60.808 57.895 28.98 0.00 0.00 1.90
1731 1807 3.400590 GTCGTTGTCGCGTGGTCC 61.401 66.667 5.77 0.00 36.96 4.46
1811 1893 1.822613 ATCGTCCCTAAGAGCGCGA 60.823 57.895 12.10 0.00 0.00 5.87
1829 1911 4.342092 TCCGAGATTAGTTGCATCATCTCA 59.658 41.667 18.20 4.56 41.18 3.27
1836 1918 3.452627 AGGAACTCCGAGATTAGTTGCAT 59.547 43.478 1.33 0.00 43.95 3.96
1955 2037 2.415608 GGAGACCTCGCCGTCATCA 61.416 63.158 4.79 0.00 35.07 3.07
1998 2092 2.619165 CCAGCACGACAGCATGCAA 61.619 57.895 21.98 0.00 44.59 4.08
2074 2174 3.058160 CGACCAGTACCCCGACGT 61.058 66.667 0.00 0.00 0.00 4.34
2084 2184 2.670148 GGCCATTCCTCCGACCAGT 61.670 63.158 0.00 0.00 0.00 4.00
2162 2262 5.277250 TCGGGATCCTTCCATATATTGCTA 58.723 41.667 12.58 0.00 44.60 3.49
2168 2268 4.947883 ACTCATCGGGATCCTTCCATATA 58.052 43.478 12.58 0.00 44.60 0.86
2246 2356 1.526917 CCTTATCTGCTTGGGCCCG 60.527 63.158 19.37 4.45 37.74 6.13
2370 2480 1.900016 TGTCGGTGCTAGTCGGTGT 60.900 57.895 0.00 0.00 0.00 4.16
2372 2482 2.633509 GGTGTCGGTGCTAGTCGGT 61.634 63.158 0.00 0.00 0.00 4.69
2547 3793 2.579684 CTTTCCGCGGCTCTAGGCTT 62.580 60.000 23.51 0.00 41.46 4.35
2577 3823 0.110644 GAAACCGACAGAAAGCAGCG 60.111 55.000 0.00 0.00 0.00 5.18
2580 3826 0.944386 GCTGAAACCGACAGAAAGCA 59.056 50.000 0.00 0.00 37.54 3.91
2627 3873 6.037172 CACCCAAACTAGATAGCATTGTGTAC 59.963 42.308 0.00 0.00 0.00 2.90
2631 3877 3.947834 GCACCCAAACTAGATAGCATTGT 59.052 43.478 0.00 0.00 0.00 2.71
2754 4019 7.918033 CAGTCGACTGAGAGTCATGTTATATTT 59.082 37.037 36.73 0.00 45.30 1.40
2771 4036 4.505922 GGATTGCTAAATCTCAGTCGACTG 59.494 45.833 34.76 34.76 41.74 3.51
2772 4037 4.404073 AGGATTGCTAAATCTCAGTCGACT 59.596 41.667 13.58 13.58 41.74 4.18
2773 4038 4.688021 AGGATTGCTAAATCTCAGTCGAC 58.312 43.478 7.70 7.70 41.74 4.20
2775 4040 7.151308 AGATTAGGATTGCTAAATCTCAGTCG 58.849 38.462 1.52 0.00 41.74 4.18
2776 4041 9.638239 CTAGATTAGGATTGCTAAATCTCAGTC 57.362 37.037 1.52 0.00 41.74 3.51
2777 4042 9.153479 ACTAGATTAGGATTGCTAAATCTCAGT 57.847 33.333 1.52 7.30 41.74 3.41
2778 4043 9.995003 AACTAGATTAGGATTGCTAAATCTCAG 57.005 33.333 1.52 6.87 41.74 3.35
2781 4046 9.785982 GGAAACTAGATTAGGATTGCTAAATCT 57.214 33.333 1.52 7.97 41.74 2.40
2782 4047 8.713271 CGGAAACTAGATTAGGATTGCTAAATC 58.287 37.037 1.52 1.66 41.37 2.17
2783 4048 7.173390 GCGGAAACTAGATTAGGATTGCTAAAT 59.827 37.037 1.52 0.00 0.00 1.40
2784 4049 6.482308 GCGGAAACTAGATTAGGATTGCTAAA 59.518 38.462 1.52 0.00 0.00 1.85
2786 4051 5.539048 GCGGAAACTAGATTAGGATTGCTA 58.461 41.667 0.00 0.00 0.00 3.49
2787 4052 4.381411 GCGGAAACTAGATTAGGATTGCT 58.619 43.478 0.00 0.00 0.00 3.91
2788 4053 3.184581 CGCGGAAACTAGATTAGGATTGC 59.815 47.826 0.00 0.00 0.00 3.56
2789 4054 3.741344 CCGCGGAAACTAGATTAGGATTG 59.259 47.826 24.07 0.00 0.00 2.67
2790 4055 3.802675 GCCGCGGAAACTAGATTAGGATT 60.803 47.826 33.48 0.00 0.00 3.01
2791 4056 2.288886 GCCGCGGAAACTAGATTAGGAT 60.289 50.000 33.48 0.00 0.00 3.24
2792 4057 1.068127 GCCGCGGAAACTAGATTAGGA 59.932 52.381 33.48 0.00 0.00 2.94
2793 4058 1.499049 GCCGCGGAAACTAGATTAGG 58.501 55.000 33.48 0.00 0.00 2.69
2794 4059 1.068741 AGGCCGCGGAAACTAGATTAG 59.931 52.381 33.48 0.00 0.00 1.73
2795 4060 1.068127 GAGGCCGCGGAAACTAGATTA 59.932 52.381 33.48 0.00 0.00 1.75
2796 4061 0.179081 GAGGCCGCGGAAACTAGATT 60.179 55.000 33.48 0.88 0.00 2.40
2797 4062 1.043673 AGAGGCCGCGGAAACTAGAT 61.044 55.000 33.48 9.84 0.00 1.98
2798 4063 0.394762 TAGAGGCCGCGGAAACTAGA 60.395 55.000 33.48 11.36 0.00 2.43
2799 4064 0.248949 GTAGAGGCCGCGGAAACTAG 60.249 60.000 33.48 0.00 0.00 2.57
2800 4065 1.669999 GGTAGAGGCCGCGGAAACTA 61.670 60.000 33.48 23.25 0.00 2.24
2801 4066 2.577593 GTAGAGGCCGCGGAAACT 59.422 61.111 33.48 23.33 0.00 2.66
2802 4067 2.510918 GGTAGAGGCCGCGGAAAC 60.511 66.667 33.48 18.46 0.00 2.78
2803 4068 3.777910 GGGTAGAGGCCGCGGAAA 61.778 66.667 33.48 5.12 0.00 3.13
2810 4075 4.477119 AGGACGGGGGTAGAGGCC 62.477 72.222 0.00 0.00 0.00 5.19
2811 4076 3.155167 CAGGACGGGGGTAGAGGC 61.155 72.222 0.00 0.00 0.00 4.70
2812 4077 2.444140 CCAGGACGGGGGTAGAGG 60.444 72.222 0.00 0.00 0.00 3.69
2813 4078 2.058595 CACCAGGACGGGGGTAGAG 61.059 68.421 0.00 0.00 40.22 2.43
2814 4079 2.038329 CACCAGGACGGGGGTAGA 59.962 66.667 0.00 0.00 40.22 2.59
2815 4080 2.038329 TCACCAGGACGGGGGTAG 59.962 66.667 0.00 0.00 39.52 3.18
2816 4081 2.038329 CTCACCAGGACGGGGGTA 59.962 66.667 0.00 0.00 39.52 3.69
2817 4082 3.477956 TTCTCACCAGGACGGGGGT 62.478 63.158 0.00 0.00 39.52 4.95
2818 4083 2.606519 TTCTCACCAGGACGGGGG 60.607 66.667 0.00 0.00 39.52 5.40
2819 4084 2.663196 GTTCTCACCAGGACGGGG 59.337 66.667 0.00 0.00 41.04 5.73
2820 4085 2.261671 CGTTCTCACCAGGACGGG 59.738 66.667 0.00 0.00 46.61 5.28
2823 4088 2.069273 CATGAACGTTCTCACCAGGAC 58.931 52.381 27.32 0.00 0.00 3.85
2824 4089 1.001974 CCATGAACGTTCTCACCAGGA 59.998 52.381 27.32 6.50 0.00 3.86
2825 4090 1.270839 ACCATGAACGTTCTCACCAGG 60.271 52.381 27.32 19.95 0.00 4.45
2826 4091 1.800586 CACCATGAACGTTCTCACCAG 59.199 52.381 27.32 13.16 0.00 4.00
2827 4092 1.140052 ACACCATGAACGTTCTCACCA 59.860 47.619 27.32 9.40 0.00 4.17
2828 4093 1.531149 CACACCATGAACGTTCTCACC 59.469 52.381 27.32 3.35 0.00 4.02
2829 4094 2.221055 GTCACACCATGAACGTTCTCAC 59.779 50.000 27.32 3.75 39.72 3.51
2830 4095 2.479837 GTCACACCATGAACGTTCTCA 58.520 47.619 27.32 11.17 39.72 3.27
2831 4096 1.455786 CGTCACACCATGAACGTTCTC 59.544 52.381 27.32 4.99 39.72 2.87
2832 4097 1.497991 CGTCACACCATGAACGTTCT 58.502 50.000 27.32 11.56 39.72 3.01
2833 4098 0.110823 GCGTCACACCATGAACGTTC 60.111 55.000 21.42 21.42 39.72 3.95
2834 4099 1.827315 CGCGTCACACCATGAACGTT 61.827 55.000 0.00 0.00 39.72 3.99
2835 4100 2.307309 CGCGTCACACCATGAACGT 61.307 57.895 0.00 0.00 39.72 3.99
2836 4101 2.019408 TCGCGTCACACCATGAACG 61.019 57.895 5.77 0.00 39.72 3.95
2837 4102 1.491563 GTCGCGTCACACCATGAAC 59.508 57.895 5.77 0.00 39.72 3.18
2838 4103 2.019408 CGTCGCGTCACACCATGAA 61.019 57.895 5.77 0.00 39.72 2.57
2839 4104 2.430075 CGTCGCGTCACACCATGA 60.430 61.111 5.77 0.00 33.79 3.07
2840 4105 2.733218 ACGTCGCGTCACACCATG 60.733 61.111 5.77 0.00 33.69 3.66
2841 4106 2.733218 CACGTCGCGTCACACCAT 60.733 61.111 5.77 0.00 38.32 3.55
2842 4107 4.934942 CCACGTCGCGTCACACCA 62.935 66.667 5.77 0.00 38.32 4.17
2843 4108 4.936823 ACCACGTCGCGTCACACC 62.937 66.667 5.77 0.00 38.32 4.16
2844 4109 2.958016 AACCACGTCGCGTCACAC 60.958 61.111 5.77 0.00 38.32 3.82
2845 4110 2.957489 CAACCACGTCGCGTCACA 60.957 61.111 5.77 0.00 38.32 3.58
2846 4111 2.656007 TCAACCACGTCGCGTCAC 60.656 61.111 5.77 0.00 38.32 3.67
2847 4112 2.656007 GTCAACCACGTCGCGTCA 60.656 61.111 5.77 0.00 38.32 4.35
2848 4113 0.730155 TATGTCAACCACGTCGCGTC 60.730 55.000 5.77 0.00 38.32 5.19
2849 4114 0.108992 ATATGTCAACCACGTCGCGT 60.109 50.000 5.77 0.00 42.36 6.01
2850 4115 0.297525 CATATGTCAACCACGTCGCG 59.702 55.000 0.00 0.00 0.00 5.87
2856 4121 3.056179 CCAAAACCCCATATGTCAACCAC 60.056 47.826 1.24 0.00 0.00 4.16
2889 4154 0.965866 TTTGCACGGGTGAACCAACA 60.966 50.000 2.38 0.00 40.22 3.33
2892 4157 2.122167 GGTTTGCACGGGTGAACCA 61.122 57.895 16.34 0.00 37.39 3.67
2893 4158 0.535553 TAGGTTTGCACGGGTGAACC 60.536 55.000 14.21 14.21 37.58 3.62
2895 4160 0.881159 CGTAGGTTTGCACGGGTGAA 60.881 55.000 2.38 0.00 34.57 3.18
2910 4175 5.282510 CCTTAAGTGTAGCATTCTCCGTAG 58.717 45.833 0.97 0.00 0.00 3.51
2911 4176 4.098960 CCCTTAAGTGTAGCATTCTCCGTA 59.901 45.833 0.97 0.00 0.00 4.02
2931 4196 2.593436 CCGTGCGGAAACAACCCT 60.593 61.111 4.35 0.00 37.50 4.34
2941 4206 1.567504 CCATAACTACTTCCGTGCGG 58.432 55.000 3.94 3.94 0.00 5.69
2942 4207 1.567504 CCCATAACTACTTCCGTGCG 58.432 55.000 0.00 0.00 0.00 5.34
2945 4210 2.463752 TCAGCCCATAACTACTTCCGT 58.536 47.619 0.00 0.00 0.00 4.69
2947 4212 5.193679 ACAATTCAGCCCATAACTACTTCC 58.806 41.667 0.00 0.00 0.00 3.46
2949 4214 7.122204 GGTTTACAATTCAGCCCATAACTACTT 59.878 37.037 0.00 0.00 0.00 2.24
2958 4223 3.340034 CGTAGGTTTACAATTCAGCCCA 58.660 45.455 0.00 0.00 0.00 5.36
2988 4253 4.082571 GCAGAAAATGAACTACACCAGCAT 60.083 41.667 0.00 0.00 0.00 3.79
2991 4256 6.801539 TTAGCAGAAAATGAACTACACCAG 57.198 37.500 0.00 0.00 0.00 4.00
2998 4263 8.860088 AGGTTTACAATTAGCAGAAAATGAACT 58.140 29.630 0.00 0.00 0.00 3.01
3001 4266 8.447833 CGTAGGTTTACAATTAGCAGAAAATGA 58.552 33.333 0.00 0.00 0.00 2.57
3002 4267 8.601243 CGTAGGTTTACAATTAGCAGAAAATG 57.399 34.615 0.00 0.00 0.00 2.32
3022 4287 6.143559 ATGTGTAGCATTAACCAACCGTAGG 61.144 44.000 0.00 0.00 45.86 3.18
3023 4288 4.247258 TGTGTAGCATTAACCAACCGTAG 58.753 43.478 0.00 0.00 0.00 3.51
3024 4289 4.268797 TGTGTAGCATTAACCAACCGTA 57.731 40.909 0.00 0.00 0.00 4.02
3025 4290 3.128852 TGTGTAGCATTAACCAACCGT 57.871 42.857 0.00 0.00 0.00 4.83
3026 4291 4.632251 TGTATGTGTAGCATTAACCAACCG 59.368 41.667 0.00 0.00 38.94 4.44
3027 4292 6.503589 TTGTATGTGTAGCATTAACCAACC 57.496 37.500 0.00 0.00 38.94 3.77
3028 4293 7.540745 CCTTTTGTATGTGTAGCATTAACCAAC 59.459 37.037 0.00 0.00 38.94 3.77
3029 4294 7.448777 TCCTTTTGTATGTGTAGCATTAACCAA 59.551 33.333 0.00 0.00 38.94 3.67
3030 4295 6.943146 TCCTTTTGTATGTGTAGCATTAACCA 59.057 34.615 0.00 0.00 38.94 3.67
3031 4296 7.385778 TCCTTTTGTATGTGTAGCATTAACC 57.614 36.000 0.00 0.00 38.94 2.85
3032 4297 9.931210 GTATCCTTTTGTATGTGTAGCATTAAC 57.069 33.333 0.00 0.00 38.94 2.01
3033 4298 9.674068 TGTATCCTTTTGTATGTGTAGCATTAA 57.326 29.630 0.00 0.00 38.94 1.40
3034 4299 9.845740 ATGTATCCTTTTGTATGTGTAGCATTA 57.154 29.630 0.00 0.00 38.94 1.90
3035 4300 8.623903 CATGTATCCTTTTGTATGTGTAGCATT 58.376 33.333 0.00 0.00 38.94 3.56
3036 4301 7.255242 GCATGTATCCTTTTGTATGTGTAGCAT 60.255 37.037 0.00 0.00 41.42 3.79
3037 4302 6.038161 GCATGTATCCTTTTGTATGTGTAGCA 59.962 38.462 0.00 0.00 0.00 3.49
3038 4303 6.260936 AGCATGTATCCTTTTGTATGTGTAGC 59.739 38.462 0.00 0.00 0.00 3.58
3039 4304 7.792374 AGCATGTATCCTTTTGTATGTGTAG 57.208 36.000 0.00 0.00 0.00 2.74
3040 4305 8.574251 AAAGCATGTATCCTTTTGTATGTGTA 57.426 30.769 0.00 0.00 0.00 2.90
3041 4306 7.466746 AAAGCATGTATCCTTTTGTATGTGT 57.533 32.000 0.00 0.00 0.00 3.72
3042 4307 9.289303 GTAAAAGCATGTATCCTTTTGTATGTG 57.711 33.333 15.10 0.00 34.60 3.21
3043 4308 9.019656 TGTAAAAGCATGTATCCTTTTGTATGT 57.980 29.630 15.10 0.00 34.60 2.29
3050 4315 9.255029 ACCTTTATGTAAAAGCATGTATCCTTT 57.745 29.630 0.00 0.00 32.98 3.11
3051 4316 8.686334 CACCTTTATGTAAAAGCATGTATCCTT 58.314 33.333 0.00 0.00 0.00 3.36
3052 4317 7.285401 CCACCTTTATGTAAAAGCATGTATCCT 59.715 37.037 0.00 0.00 0.00 3.24
3053 4318 7.425606 CCACCTTTATGTAAAAGCATGTATCC 58.574 38.462 0.00 0.00 0.00 2.59
3054 4319 7.068226 ACCCACCTTTATGTAAAAGCATGTATC 59.932 37.037 0.00 0.00 0.00 2.24
3055 4320 6.895204 ACCCACCTTTATGTAAAAGCATGTAT 59.105 34.615 0.00 0.00 0.00 2.29
3056 4321 6.249951 ACCCACCTTTATGTAAAAGCATGTA 58.750 36.000 0.00 0.00 0.00 2.29
3057 4322 5.083821 ACCCACCTTTATGTAAAAGCATGT 58.916 37.500 0.00 0.00 0.00 3.21
3058 4323 5.659440 ACCCACCTTTATGTAAAAGCATG 57.341 39.130 0.00 0.00 0.00 4.06
3059 4324 6.680148 AAACCCACCTTTATGTAAAAGCAT 57.320 33.333 0.00 0.00 0.00 3.79
3060 4325 6.098409 TCAAAACCCACCTTTATGTAAAAGCA 59.902 34.615 0.00 0.00 0.00 3.91
3061 4326 6.517605 TCAAAACCCACCTTTATGTAAAAGC 58.482 36.000 0.00 0.00 0.00 3.51
3062 4327 8.987890 CAATCAAAACCCACCTTTATGTAAAAG 58.012 33.333 0.00 0.00 0.00 2.27
3063 4328 8.705594 TCAATCAAAACCCACCTTTATGTAAAA 58.294 29.630 0.00 0.00 0.00 1.52
3064 4329 8.251383 TCAATCAAAACCCACCTTTATGTAAA 57.749 30.769 0.00 0.00 0.00 2.01
3065 4330 7.841282 TCAATCAAAACCCACCTTTATGTAA 57.159 32.000 0.00 0.00 0.00 2.41
3066 4331 7.726291 TCTTCAATCAAAACCCACCTTTATGTA 59.274 33.333 0.00 0.00 0.00 2.29
3067 4332 6.553100 TCTTCAATCAAAACCCACCTTTATGT 59.447 34.615 0.00 0.00 0.00 2.29
3068 4333 6.991938 TCTTCAATCAAAACCCACCTTTATG 58.008 36.000 0.00 0.00 0.00 1.90
3069 4334 7.797121 ATCTTCAATCAAAACCCACCTTTAT 57.203 32.000 0.00 0.00 0.00 1.40
3070 4335 7.610580 AATCTTCAATCAAAACCCACCTTTA 57.389 32.000 0.00 0.00 0.00 1.85
3071 4336 6.499106 AATCTTCAATCAAAACCCACCTTT 57.501 33.333 0.00 0.00 0.00 3.11
3072 4337 7.256296 CCTTAATCTTCAATCAAAACCCACCTT 60.256 37.037 0.00 0.00 0.00 3.50
3073 4338 6.211384 CCTTAATCTTCAATCAAAACCCACCT 59.789 38.462 0.00 0.00 0.00 4.00
3074 4339 6.398095 CCTTAATCTTCAATCAAAACCCACC 58.602 40.000 0.00 0.00 0.00 4.61
3075 4340 6.398095 CCCTTAATCTTCAATCAAAACCCAC 58.602 40.000 0.00 0.00 0.00 4.61
3076 4341 5.483583 CCCCTTAATCTTCAATCAAAACCCA 59.516 40.000 0.00 0.00 0.00 4.51
3077 4342 5.104941 CCCCCTTAATCTTCAATCAAAACCC 60.105 44.000 0.00 0.00 0.00 4.11
3078 4343 5.719563 TCCCCCTTAATCTTCAATCAAAACC 59.280 40.000 0.00 0.00 0.00 3.27
3079 4344 6.663523 TCTCCCCCTTAATCTTCAATCAAAAC 59.336 38.462 0.00 0.00 0.00 2.43
3080 4345 6.799827 TCTCCCCCTTAATCTTCAATCAAAA 58.200 36.000 0.00 0.00 0.00 2.44
3081 4346 6.401537 TCTCCCCCTTAATCTTCAATCAAA 57.598 37.500 0.00 0.00 0.00 2.69
3082 4347 6.367983 CATCTCCCCCTTAATCTTCAATCAA 58.632 40.000 0.00 0.00 0.00 2.57
3083 4348 5.163055 CCATCTCCCCCTTAATCTTCAATCA 60.163 44.000 0.00 0.00 0.00 2.57
3084 4349 5.320277 CCATCTCCCCCTTAATCTTCAATC 58.680 45.833 0.00 0.00 0.00 2.67
3085 4350 4.106987 CCCATCTCCCCCTTAATCTTCAAT 59.893 45.833 0.00 0.00 0.00 2.57
3086 4351 3.463329 CCCATCTCCCCCTTAATCTTCAA 59.537 47.826 0.00 0.00 0.00 2.69
3087 4352 3.056080 CCCATCTCCCCCTTAATCTTCA 58.944 50.000 0.00 0.00 0.00 3.02
3088 4353 2.376855 CCCCATCTCCCCCTTAATCTTC 59.623 54.545 0.00 0.00 0.00 2.87
3089 4354 2.433031 CCCCATCTCCCCCTTAATCTT 58.567 52.381 0.00 0.00 0.00 2.40
3090 4355 2.053251 GCCCCATCTCCCCCTTAATCT 61.053 57.143 0.00 0.00 0.00 2.40
3091 4356 0.405973 GCCCCATCTCCCCCTTAATC 59.594 60.000 0.00 0.00 0.00 1.75
3092 4357 1.074296 GGCCCCATCTCCCCCTTAAT 61.074 60.000 0.00 0.00 0.00 1.40
3093 4358 1.699930 GGCCCCATCTCCCCCTTAA 60.700 63.158 0.00 0.00 0.00 1.85
3094 4359 2.038762 GGCCCCATCTCCCCCTTA 60.039 66.667 0.00 0.00 0.00 2.69
3108 4373 1.306911 ATTTTCATGGGGGTGGGCC 60.307 57.895 0.00 0.00 0.00 5.80
3109 4374 0.617249 TGATTTTCATGGGGGTGGGC 60.617 55.000 0.00 0.00 0.00 5.36
3110 4375 1.488390 CTGATTTTCATGGGGGTGGG 58.512 55.000 0.00 0.00 0.00 4.61
3111 4376 1.488390 CCTGATTTTCATGGGGGTGG 58.512 55.000 0.00 0.00 0.00 4.61
3112 4377 1.488390 CCCTGATTTTCATGGGGGTG 58.512 55.000 0.00 0.00 33.76 4.61
3113 4378 0.339510 CCCCTGATTTTCATGGGGGT 59.660 55.000 16.98 0.00 45.29 4.95
3114 4379 3.228939 CCCCTGATTTTCATGGGGG 57.771 57.895 16.98 12.41 45.29 5.40
3133 4398 8.159447 TCTTTTTAAACTAACTAACCTCTCCCC 58.841 37.037 0.00 0.00 0.00 4.81
3147 4412 9.706691 CACACTGACTAGGATCTTTTTAAACTA 57.293 33.333 0.00 0.00 0.00 2.24
3153 4418 8.974060 TTTTACACACTGACTAGGATCTTTTT 57.026 30.769 0.00 0.00 0.00 1.94
3155 4420 6.651225 GCTTTTACACACTGACTAGGATCTTT 59.349 38.462 0.00 0.00 0.00 2.52
3157 4422 5.246203 TGCTTTTACACACTGACTAGGATCT 59.754 40.000 0.00 0.00 0.00 2.75
3158 4423 5.479306 TGCTTTTACACACTGACTAGGATC 58.521 41.667 0.00 0.00 0.00 3.36
3159 4424 5.483685 TGCTTTTACACACTGACTAGGAT 57.516 39.130 0.00 0.00 0.00 3.24
3160 4425 4.948341 TGCTTTTACACACTGACTAGGA 57.052 40.909 0.00 0.00 0.00 2.94
3161 4426 4.997395 ACATGCTTTTACACACTGACTAGG 59.003 41.667 0.00 0.00 0.00 3.02
3162 4427 7.652300 TTACATGCTTTTACACACTGACTAG 57.348 36.000 0.00 0.00 0.00 2.57
3163 4428 7.041644 GGTTTACATGCTTTTACACACTGACTA 60.042 37.037 0.00 0.00 0.00 2.59
3164 4429 6.238648 GGTTTACATGCTTTTACACACTGACT 60.239 38.462 0.00 0.00 0.00 3.41
3165 4430 5.912955 GGTTTACATGCTTTTACACACTGAC 59.087 40.000 0.00 0.00 0.00 3.51
3166 4431 5.825679 AGGTTTACATGCTTTTACACACTGA 59.174 36.000 0.00 0.00 0.00 3.41
3168 4433 6.709018 AAGGTTTACATGCTTTTACACACT 57.291 33.333 0.00 0.00 0.00 3.55
3169 4434 6.754675 ACAAAGGTTTACATGCTTTTACACAC 59.245 34.615 0.00 0.00 0.00 3.82
3171 4436 8.911662 CATACAAAGGTTTACATGCTTTTACAC 58.088 33.333 0.00 0.00 0.00 2.90
3172 4437 8.634444 ACATACAAAGGTTTACATGCTTTTACA 58.366 29.630 0.00 0.00 0.00 2.41
3173 4438 9.471084 AACATACAAAGGTTTACATGCTTTTAC 57.529 29.630 0.00 0.00 0.00 2.01
3175 4440 8.956533 AAACATACAAAGGTTTACATGCTTTT 57.043 26.923 0.00 0.00 37.81 2.27
3176 4441 9.691362 CTAAACATACAAAGGTTTACATGCTTT 57.309 29.630 0.00 0.00 40.00 3.51
3177 4442 7.812669 GCTAAACATACAAAGGTTTACATGCTT 59.187 33.333 0.00 0.00 40.00 3.91
3178 4443 7.040062 TGCTAAACATACAAAGGTTTACATGCT 60.040 33.333 0.00 0.00 40.00 3.79
3180 4445 9.638239 AATGCTAAACATACAAAGGTTTACATG 57.362 29.630 0.00 0.00 40.00 3.21
3217 4482 3.706055 ACGCAGTTGGATGTTCACT 57.294 47.368 0.00 0.00 37.78 3.41
3230 4495 7.919091 TGTACTCTTATAGGTTTATCAACGCAG 59.081 37.037 0.00 0.00 33.13 5.18
3231 4496 7.774134 TGTACTCTTATAGGTTTATCAACGCA 58.226 34.615 0.00 0.00 33.13 5.24
3232 4497 8.813643 ATGTACTCTTATAGGTTTATCAACGC 57.186 34.615 0.00 0.00 33.13 4.84
3233 4498 9.961265 TGATGTACTCTTATAGGTTTATCAACG 57.039 33.333 0.00 0.00 33.13 4.10
3236 4501 9.656323 ACCTGATGTACTCTTATAGGTTTATCA 57.344 33.333 0.00 0.00 33.53 2.15
3238 4503 9.656323 TGACCTGATGTACTCTTATAGGTTTAT 57.344 33.333 0.00 0.00 37.21 1.40
3239 4504 9.483489 TTGACCTGATGTACTCTTATAGGTTTA 57.517 33.333 0.00 0.00 37.21 2.01
3240 4505 7.973048 TGACCTGATGTACTCTTATAGGTTT 57.027 36.000 0.00 0.00 37.21 3.27
3241 4506 7.973048 TTGACCTGATGTACTCTTATAGGTT 57.027 36.000 0.00 0.00 37.21 3.50
3242 4507 7.973048 TTTGACCTGATGTACTCTTATAGGT 57.027 36.000 0.00 0.00 39.60 3.08
3272 4537 5.516339 CGCTTTGTCATCTGTTCTTGTTTTT 59.484 36.000 0.00 0.00 0.00 1.94
3273 4538 5.036737 CGCTTTGTCATCTGTTCTTGTTTT 58.963 37.500 0.00 0.00 0.00 2.43
3275 4540 3.876914 TCGCTTTGTCATCTGTTCTTGTT 59.123 39.130 0.00 0.00 0.00 2.83
3276 4541 3.466836 TCGCTTTGTCATCTGTTCTTGT 58.533 40.909 0.00 0.00 0.00 3.16
3277 4542 3.666374 GCTCGCTTTGTCATCTGTTCTTG 60.666 47.826 0.00 0.00 0.00 3.02
3278 4543 2.481952 GCTCGCTTTGTCATCTGTTCTT 59.518 45.455 0.00 0.00 0.00 2.52
3279 4544 2.072298 GCTCGCTTTGTCATCTGTTCT 58.928 47.619 0.00 0.00 0.00 3.01
3280 4545 1.800586 TGCTCGCTTTGTCATCTGTTC 59.199 47.619 0.00 0.00 0.00 3.18
3281 4546 1.882912 TGCTCGCTTTGTCATCTGTT 58.117 45.000 0.00 0.00 0.00 3.16
3282 4547 1.532868 GTTGCTCGCTTTGTCATCTGT 59.467 47.619 0.00 0.00 0.00 3.41
3283 4548 1.532437 TGTTGCTCGCTTTGTCATCTG 59.468 47.619 0.00 0.00 0.00 2.90
3284 4549 1.882912 TGTTGCTCGCTTTGTCATCT 58.117 45.000 0.00 0.00 0.00 2.90
3286 4551 1.334059 CGTTGTTGCTCGCTTTGTCAT 60.334 47.619 0.00 0.00 0.00 3.06
3287 4552 0.027455 CGTTGTTGCTCGCTTTGTCA 59.973 50.000 0.00 0.00 0.00 3.58
3288 4553 2.770818 CGTTGTTGCTCGCTTTGTC 58.229 52.632 0.00 0.00 0.00 3.18
3289 4554 4.996113 CGTTGTTGCTCGCTTTGT 57.004 50.000 0.00 0.00 0.00 2.83
3296 4561 2.251371 GAACGGGCGTTGTTGCTC 59.749 61.111 0.00 0.00 38.60 4.26
3297 4562 2.515057 TGAACGGGCGTTGTTGCT 60.515 55.556 0.00 0.00 38.60 3.91
3298 4563 2.353030 GTGAACGGGCGTTGTTGC 60.353 61.111 0.00 0.00 38.60 4.17
3299 4564 1.278637 GAGTGAACGGGCGTTGTTG 59.721 57.895 0.00 0.00 38.60 3.33
3300 4565 1.890510 GGAGTGAACGGGCGTTGTT 60.891 57.895 0.00 0.00 38.60 2.83
3301 4566 2.280592 GGAGTGAACGGGCGTTGT 60.281 61.111 0.00 0.00 38.60 3.32
3302 4567 1.566018 GAAGGAGTGAACGGGCGTTG 61.566 60.000 0.00 0.00 38.60 4.10
3303 4568 1.301479 GAAGGAGTGAACGGGCGTT 60.301 57.895 0.00 0.00 41.54 4.84
3304 4569 2.342648 GAAGGAGTGAACGGGCGT 59.657 61.111 0.00 0.00 0.00 5.68
3305 4570 2.434359 GGAAGGAGTGAACGGGCG 60.434 66.667 0.00 0.00 0.00 6.13
3306 4571 2.046217 GGGAAGGAGTGAACGGGC 60.046 66.667 0.00 0.00 0.00 6.13
3307 4572 1.192146 TGAGGGAAGGAGTGAACGGG 61.192 60.000 0.00 0.00 0.00 5.28
3308 4573 0.037232 GTGAGGGAAGGAGTGAACGG 60.037 60.000 0.00 0.00 0.00 4.44
3309 4574 0.037232 GGTGAGGGAAGGAGTGAACG 60.037 60.000 0.00 0.00 0.00 3.95
3310 4575 1.353091 AGGTGAGGGAAGGAGTGAAC 58.647 55.000 0.00 0.00 0.00 3.18
3311 4576 1.699634 CAAGGTGAGGGAAGGAGTGAA 59.300 52.381 0.00 0.00 0.00 3.18
3312 4577 1.352083 CAAGGTGAGGGAAGGAGTGA 58.648 55.000 0.00 0.00 0.00 3.41
3313 4578 0.322008 GCAAGGTGAGGGAAGGAGTG 60.322 60.000 0.00 0.00 0.00 3.51
3314 4579 1.492993 GGCAAGGTGAGGGAAGGAGT 61.493 60.000 0.00 0.00 0.00 3.85
3327 4592 2.401766 GCGGACAGACATGGCAAGG 61.402 63.158 0.00 0.00 35.42 3.61
3333 4598 2.102438 ATGTGCGCGGACAGACATG 61.102 57.895 35.57 0.00 0.00 3.21
3334 4599 2.102438 CATGTGCGCGGACAGACAT 61.102 57.895 35.57 18.70 0.00 3.06
3337 4602 2.738139 CACATGTGCGCGGACAGA 60.738 61.111 35.57 16.44 0.00 3.41
3341 4606 1.009108 CAAAACACATGTGCGCGGA 60.009 52.632 25.68 0.00 0.00 5.54
3342 4607 1.299014 ACAAAACACATGTGCGCGG 60.299 52.632 25.68 14.99 0.00 6.46
3345 4610 1.202234 TGGTCACAAAACACATGTGCG 60.202 47.619 25.68 13.77 46.05 5.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.