Multiple sequence alignment - TraesCS2B01G037600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G037600 chr2B 100.000 2486 0 0 937 3422 17503300 17500815 0.000000e+00 4591.0
1 TraesCS2B01G037600 chr2B 88.199 1788 184 18 937 2713 17515319 17513548 0.000000e+00 2108.0
2 TraesCS2B01G037600 chr2B 88.948 1511 145 4 1155 2644 17444261 17445770 0.000000e+00 1845.0
3 TraesCS2B01G037600 chr2B 85.963 1496 187 14 942 2430 17440232 17438753 0.000000e+00 1578.0
4 TraesCS2B01G037600 chr2B 88.144 1164 108 16 1577 2713 17149599 17150759 0.000000e+00 1358.0
5 TraesCS2B01G037600 chr2B 100.000 697 0 0 1 697 17504236 17503540 0.000000e+00 1288.0
6 TraesCS2B01G037600 chr2B 93.970 597 21 9 2761 3356 17512972 17512390 0.000000e+00 889.0
7 TraesCS2B01G037600 chr2B 90.062 644 54 8 940 1581 17143916 17144551 0.000000e+00 826.0
8 TraesCS2B01G037600 chr2B 86.508 504 54 7 1984 2485 17094640 17094149 3.000000e-150 542.0
9 TraesCS2B01G037600 chr2B 92.581 310 21 2 174 482 140150037 140150345 8.710000e-121 444.0
10 TraesCS2B01G037600 chr2B 93.772 289 18 0 192 480 772214118 772214406 5.240000e-118 435.0
11 TraesCS2B01G037600 chr2B 83.245 376 44 11 2122 2493 17151283 17151643 9.160000e-86 327.0
12 TraesCS2B01G037600 chr2B 96.026 151 6 0 3261 3411 17136957 17136807 2.640000e-61 246.0
13 TraesCS2B01G037600 chr2A 90.851 1563 131 6 937 2496 11983375 11981822 0.000000e+00 2084.0
14 TraesCS2B01G037600 chr2A 87.090 457 49 4 2042 2496 11782637 11782189 3.050000e-140 508.0
15 TraesCS2B01G037600 chr2A 93.130 131 8 1 476 605 11983578 11983448 1.250000e-44 191.0
16 TraesCS2B01G037600 chr2D 89.386 1564 148 9 937 2496 11327800 11326251 0.000000e+00 1953.0
17 TraesCS2B01G037600 chr5B 94.774 287 15 0 190 476 439263705 439263991 6.740000e-122 448.0
18 TraesCS2B01G037600 chr5B 93.814 291 18 0 190 480 461569509 461569219 4.050000e-119 438.0
19 TraesCS2B01G037600 chr1B 92.605 311 21 2 190 498 662522796 662523106 2.420000e-121 446.0
20 TraesCS2B01G037600 chr1B 97.500 40 1 0 102 141 92879552 92879591 6.130000e-08 69.4
21 TraesCS2B01G037600 chr7A 94.158 291 17 0 190 480 170685915 170685625 8.710000e-121 444.0
22 TraesCS2B01G037600 chr6D 94.118 289 17 0 190 478 471829107 471828819 1.130000e-119 440.0
23 TraesCS2B01G037600 chr6D 88.372 86 7 3 2575 2660 462634158 462634076 2.170000e-17 100.0
24 TraesCS2B01G037600 chr3B 94.406 286 16 0 194 479 94663768 94663483 1.130000e-119 440.0
25 TraesCS2B01G037600 chr3B 94.097 288 17 0 192 479 17350573 17350286 4.050000e-119 438.0
26 TraesCS2B01G037600 chr3B 72.361 1165 251 52 1063 2204 13905552 13904436 5.550000e-78 302.0
27 TraesCS2B01G037600 chr3B 94.737 57 2 1 102 157 62309995 62310051 1.690000e-13 87.9
28 TraesCS2B01G037600 chr3B 100.000 28 0 0 122 149 24390072 24390045 6.000000e-03 52.8
29 TraesCS2B01G037600 chr5A 84.821 112 3 8 2601 2710 657983694 657983595 2.170000e-17 100.0
30 TraesCS2B01G037600 chr6B 88.060 67 7 1 102 167 73158939 73158873 1.020000e-10 78.7
31 TraesCS2B01G037600 chr6B 92.308 39 3 0 122 160 417491710 417491672 4.770000e-04 56.5
32 TraesCS2B01G037600 chr6A 92.453 53 3 1 100 151 411865591 411865643 1.320000e-09 75.0
33 TraesCS2B01G037600 chr6A 87.500 64 6 2 2588 2651 609477576 609477515 4.740000e-09 73.1
34 TraesCS2B01G037600 chr4A 97.561 41 1 0 102 142 545601147 545601107 1.700000e-08 71.3
35 TraesCS2B01G037600 chr7D 100.000 28 0 0 116 143 8240746 8240773 6.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G037600 chr2B 17500815 17504236 3421 True 2939.5 4591 100.0000 1 3422 2 chr2B.!!$R4 3421
1 TraesCS2B01G037600 chr2B 17444261 17445770 1509 False 1845.0 1845 88.9480 1155 2644 1 chr2B.!!$F2 1489
2 TraesCS2B01G037600 chr2B 17438753 17440232 1479 True 1578.0 1578 85.9630 942 2430 1 chr2B.!!$R3 1488
3 TraesCS2B01G037600 chr2B 17512390 17515319 2929 True 1498.5 2108 91.0845 937 3356 2 chr2B.!!$R5 2419
4 TraesCS2B01G037600 chr2B 17149599 17151643 2044 False 842.5 1358 85.6945 1577 2713 2 chr2B.!!$F5 1136
5 TraesCS2B01G037600 chr2B 17143916 17144551 635 False 826.0 826 90.0620 940 1581 1 chr2B.!!$F1 641
6 TraesCS2B01G037600 chr2A 11981822 11983578 1756 True 1137.5 2084 91.9905 476 2496 2 chr2A.!!$R2 2020
7 TraesCS2B01G037600 chr2D 11326251 11327800 1549 True 1953.0 1953 89.3860 937 2496 1 chr2D.!!$R1 1559
8 TraesCS2B01G037600 chr3B 13904436 13905552 1116 True 302.0 302 72.3610 1063 2204 1 chr3B.!!$R1 1141

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
75 76 0.395862 TTTGTCGCTGGGAAAACCCA 60.396 50.0 7.78 7.78 39.07 4.51 F
619 621 0.439985 CGTGCATGCCTGTATATCGC 59.560 55.0 16.68 0.00 0.00 4.58 F
1020 1025 0.619832 TGGATCAGCTCCTCCTGCTT 60.620 55.0 11.45 0.00 45.21 3.91 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1992 2015 0.752743 CATGGACATGGCGTGGGATT 60.753 55.0 12.05 0.00 35.24 3.01 R
2091 2114 0.478072 TGTTGTCCCTGCCAATGTCT 59.522 50.0 0.00 0.00 0.00 3.41 R
2948 4655 0.178301 GAGACCGGGAGATCAAACCC 59.822 60.0 6.32 11.16 42.43 4.11 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.842358 TTTCGTCCAACTTTGAACTTATAGAT 57.158 30.769 0.00 0.00 0.00 1.98
26 27 8.842358 TTCGTCCAACTTTGAACTTATAGATT 57.158 30.769 0.00 0.00 0.00 2.40
27 28 8.251750 TCGTCCAACTTTGAACTTATAGATTG 57.748 34.615 0.00 0.00 0.00 2.67
28 29 8.092068 TCGTCCAACTTTGAACTTATAGATTGA 58.908 33.333 0.00 0.00 0.00 2.57
29 30 8.169268 CGTCCAACTTTGAACTTATAGATTGAC 58.831 37.037 0.00 0.00 0.00 3.18
30 31 8.999431 GTCCAACTTTGAACTTATAGATTGACA 58.001 33.333 0.00 0.00 0.00 3.58
31 32 9.739276 TCCAACTTTGAACTTATAGATTGACAT 57.261 29.630 0.00 0.00 0.00 3.06
42 43 9.830186 ACTTATAGATTGACATATGTACTCCCT 57.170 33.333 8.71 5.55 0.00 4.20
48 49 9.469097 AGATTGACATATGTACTCCCTCTATAC 57.531 37.037 8.71 0.00 0.00 1.47
49 50 9.469097 GATTGACATATGTACTCCCTCTATACT 57.531 37.037 8.71 0.00 0.00 2.12
50 51 8.637196 TTGACATATGTACTCCCTCTATACTG 57.363 38.462 8.71 0.00 0.00 2.74
51 52 7.175797 TGACATATGTACTCCCTCTATACTGG 58.824 42.308 8.71 0.00 0.00 4.00
52 53 7.018249 TGACATATGTACTCCCTCTATACTGGA 59.982 40.741 8.71 0.00 0.00 3.86
53 54 7.766628 ACATATGTACTCCCTCTATACTGGAA 58.233 38.462 6.56 0.00 0.00 3.53
54 55 8.402683 ACATATGTACTCCCTCTATACTGGAAT 58.597 37.037 6.56 0.00 0.00 3.01
55 56 9.922477 CATATGTACTCCCTCTATACTGGAATA 57.078 37.037 0.00 0.00 0.00 1.75
58 59 9.845214 ATGTACTCCCTCTATACTGGAATATTT 57.155 33.333 0.00 0.00 0.00 1.40
59 60 9.090103 TGTACTCCCTCTATACTGGAATATTTG 57.910 37.037 0.00 0.00 0.00 2.32
60 61 9.091220 GTACTCCCTCTATACTGGAATATTTGT 57.909 37.037 0.00 0.00 0.00 2.83
61 62 8.196378 ACTCCCTCTATACTGGAATATTTGTC 57.804 38.462 0.00 0.00 0.00 3.18
62 63 7.039644 ACTCCCTCTATACTGGAATATTTGTCG 60.040 40.741 0.00 0.00 0.00 4.35
63 64 5.869888 CCCTCTATACTGGAATATTTGTCGC 59.130 44.000 0.00 0.00 0.00 5.19
64 65 6.295349 CCCTCTATACTGGAATATTTGTCGCT 60.295 42.308 0.00 0.00 0.00 4.93
65 66 6.587990 CCTCTATACTGGAATATTTGTCGCTG 59.412 42.308 0.00 0.00 0.00 5.18
66 67 6.455647 TCTATACTGGAATATTTGTCGCTGG 58.544 40.000 0.00 0.00 0.00 4.85
67 68 2.643551 ACTGGAATATTTGTCGCTGGG 58.356 47.619 0.00 0.00 0.00 4.45
68 69 2.238646 ACTGGAATATTTGTCGCTGGGA 59.761 45.455 0.00 0.00 0.00 4.37
69 70 3.278574 CTGGAATATTTGTCGCTGGGAA 58.721 45.455 0.00 0.00 0.00 3.97
70 71 3.691575 TGGAATATTTGTCGCTGGGAAA 58.308 40.909 0.00 0.00 0.00 3.13
71 72 4.082845 TGGAATATTTGTCGCTGGGAAAA 58.917 39.130 0.00 0.00 0.00 2.29
72 73 4.082463 TGGAATATTTGTCGCTGGGAAAAC 60.082 41.667 0.00 0.00 0.00 2.43
73 74 4.421058 GAATATTTGTCGCTGGGAAAACC 58.579 43.478 0.00 0.00 40.81 3.27
74 75 0.966179 ATTTGTCGCTGGGAAAACCC 59.034 50.000 0.00 0.00 39.07 4.11
75 76 0.395862 TTTGTCGCTGGGAAAACCCA 60.396 50.000 7.78 7.78 39.07 4.51
83 84 2.534042 TGGGAAAACCCAGTTCAACA 57.466 45.000 3.67 0.00 39.07 3.33
84 85 3.039252 TGGGAAAACCCAGTTCAACAT 57.961 42.857 3.67 0.00 39.07 2.71
85 86 2.962421 TGGGAAAACCCAGTTCAACATC 59.038 45.455 3.67 0.00 39.07 3.06
86 87 3.230976 GGGAAAACCCAGTTCAACATCT 58.769 45.455 0.00 0.00 36.34 2.90
87 88 3.255888 GGGAAAACCCAGTTCAACATCTC 59.744 47.826 0.00 0.00 36.34 2.75
88 89 3.255888 GGAAAACCCAGTTCAACATCTCC 59.744 47.826 0.00 0.00 34.14 3.71
89 90 2.586648 AACCCAGTTCAACATCTCCC 57.413 50.000 0.00 0.00 0.00 4.30
90 91 1.444933 ACCCAGTTCAACATCTCCCA 58.555 50.000 0.00 0.00 0.00 4.37
91 92 1.352352 ACCCAGTTCAACATCTCCCAG 59.648 52.381 0.00 0.00 0.00 4.45
92 93 1.457346 CCAGTTCAACATCTCCCAGC 58.543 55.000 0.00 0.00 0.00 4.85
93 94 1.081892 CAGTTCAACATCTCCCAGCG 58.918 55.000 0.00 0.00 0.00 5.18
94 95 0.976641 AGTTCAACATCTCCCAGCGA 59.023 50.000 0.00 0.00 0.00 4.93
95 96 1.556911 AGTTCAACATCTCCCAGCGAT 59.443 47.619 0.00 0.00 0.00 4.58
96 97 1.667724 GTTCAACATCTCCCAGCGATG 59.332 52.381 0.00 0.00 42.97 3.84
99 100 2.907703 ACATCTCCCAGCGATGTCT 58.092 52.632 0.00 0.00 46.15 3.41
100 101 0.749649 ACATCTCCCAGCGATGTCTC 59.250 55.000 0.00 0.00 46.15 3.36
101 102 1.039068 CATCTCCCAGCGATGTCTCT 58.961 55.000 0.00 0.00 34.87 3.10
102 103 2.234143 CATCTCCCAGCGATGTCTCTA 58.766 52.381 0.00 0.00 34.87 2.43
103 104 1.974265 TCTCCCAGCGATGTCTCTAG 58.026 55.000 0.00 0.00 0.00 2.43
104 105 1.490910 TCTCCCAGCGATGTCTCTAGA 59.509 52.381 0.00 0.00 0.00 2.43
105 106 1.606668 CTCCCAGCGATGTCTCTAGAC 59.393 57.143 0.00 3.08 44.97 2.59
133 134 9.675464 AATGTAAGACAATAATTTTAGGACGGA 57.325 29.630 0.00 0.00 0.00 4.69
134 135 8.712285 TGTAAGACAATAATTTTAGGACGGAG 57.288 34.615 0.00 0.00 0.00 4.63
135 136 7.767198 TGTAAGACAATAATTTTAGGACGGAGG 59.233 37.037 0.00 0.00 0.00 4.30
136 137 5.681639 AGACAATAATTTTAGGACGGAGGG 58.318 41.667 0.00 0.00 0.00 4.30
137 138 5.427481 AGACAATAATTTTAGGACGGAGGGA 59.573 40.000 0.00 0.00 0.00 4.20
138 139 5.681639 ACAATAATTTTAGGACGGAGGGAG 58.318 41.667 0.00 0.00 0.00 4.30
139 140 5.191124 ACAATAATTTTAGGACGGAGGGAGT 59.809 40.000 0.00 0.00 0.00 3.85
140 141 6.384886 ACAATAATTTTAGGACGGAGGGAGTA 59.615 38.462 0.00 0.00 0.00 2.59
141 142 7.072076 ACAATAATTTTAGGACGGAGGGAGTAT 59.928 37.037 0.00 0.00 0.00 2.12
142 143 5.970501 AATTTTAGGACGGAGGGAGTATT 57.029 39.130 0.00 0.00 0.00 1.89
143 144 5.970501 ATTTTAGGACGGAGGGAGTATTT 57.029 39.130 0.00 0.00 0.00 1.40
144 145 7.441903 AATTTTAGGACGGAGGGAGTATTTA 57.558 36.000 0.00 0.00 0.00 1.40
145 146 6.475596 TTTTAGGACGGAGGGAGTATTTAG 57.524 41.667 0.00 0.00 0.00 1.85
146 147 2.960163 AGGACGGAGGGAGTATTTAGG 58.040 52.381 0.00 0.00 0.00 2.69
147 148 2.517127 AGGACGGAGGGAGTATTTAGGA 59.483 50.000 0.00 0.00 0.00 2.94
148 149 3.052338 AGGACGGAGGGAGTATTTAGGAA 60.052 47.826 0.00 0.00 0.00 3.36
149 150 3.069300 GGACGGAGGGAGTATTTAGGAAC 59.931 52.174 0.00 0.00 0.00 3.62
150 151 3.703052 GACGGAGGGAGTATTTAGGAACA 59.297 47.826 0.00 0.00 0.00 3.18
151 152 3.705072 ACGGAGGGAGTATTTAGGAACAG 59.295 47.826 0.00 0.00 0.00 3.16
152 153 3.069729 CGGAGGGAGTATTTAGGAACAGG 59.930 52.174 0.00 0.00 0.00 4.00
153 154 3.391626 GGAGGGAGTATTTAGGAACAGGG 59.608 52.174 0.00 0.00 0.00 4.45
154 155 3.391626 GAGGGAGTATTTAGGAACAGGGG 59.608 52.174 0.00 0.00 0.00 4.79
155 156 3.014807 AGGGAGTATTTAGGAACAGGGGA 59.985 47.826 0.00 0.00 0.00 4.81
156 157 3.784202 GGGAGTATTTAGGAACAGGGGAA 59.216 47.826 0.00 0.00 0.00 3.97
157 158 4.141459 GGGAGTATTTAGGAACAGGGGAAG 60.141 50.000 0.00 0.00 0.00 3.46
158 159 4.473922 GGAGTATTTAGGAACAGGGGAAGT 59.526 45.833 0.00 0.00 0.00 3.01
159 160 5.664457 GGAGTATTTAGGAACAGGGGAAGTA 59.336 44.000 0.00 0.00 0.00 2.24
160 161 6.329460 GGAGTATTTAGGAACAGGGGAAGTAT 59.671 42.308 0.00 0.00 0.00 2.12
161 162 7.147355 GGAGTATTTAGGAACAGGGGAAGTATT 60.147 40.741 0.00 0.00 0.00 1.89
162 163 8.171337 AGTATTTAGGAACAGGGGAAGTATTT 57.829 34.615 0.00 0.00 0.00 1.40
163 164 9.287818 AGTATTTAGGAACAGGGGAAGTATTTA 57.712 33.333 0.00 0.00 0.00 1.40
167 168 8.817092 TTAGGAACAGGGGAAGTATTTATTTG 57.183 34.615 0.00 0.00 0.00 2.32
168 169 6.800890 AGGAACAGGGGAAGTATTTATTTGT 58.199 36.000 0.00 0.00 0.00 2.83
169 170 7.935405 AGGAACAGGGGAAGTATTTATTTGTA 58.065 34.615 0.00 0.00 0.00 2.41
170 171 8.395605 AGGAACAGGGGAAGTATTTATTTGTAA 58.604 33.333 0.00 0.00 0.00 2.41
171 172 9.027202 GGAACAGGGGAAGTATTTATTTGTAAA 57.973 33.333 0.00 0.00 0.00 2.01
172 173 9.850628 GAACAGGGGAAGTATTTATTTGTAAAC 57.149 33.333 0.00 0.00 0.00 2.01
173 174 9.596308 AACAGGGGAAGTATTTATTTGTAAACT 57.404 29.630 0.00 0.00 0.00 2.66
186 187 9.953565 TTTATTTGTAAACTACTGATGGCTAGT 57.046 29.630 0.00 0.00 0.00 2.57
187 188 7.849804 ATTTGTAAACTACTGATGGCTAGTG 57.150 36.000 0.00 0.00 0.00 2.74
188 189 5.995565 TGTAAACTACTGATGGCTAGTGT 57.004 39.130 0.00 0.00 0.00 3.55
189 190 7.470935 TTGTAAACTACTGATGGCTAGTGTA 57.529 36.000 0.00 0.00 0.00 2.90
190 191 7.655521 TGTAAACTACTGATGGCTAGTGTAT 57.344 36.000 0.00 0.00 0.00 2.29
191 192 8.074613 TGTAAACTACTGATGGCTAGTGTATT 57.925 34.615 0.00 0.00 0.00 1.89
192 193 8.537016 TGTAAACTACTGATGGCTAGTGTATTT 58.463 33.333 0.00 0.00 0.00 1.40
195 196 7.291411 ACTACTGATGGCTAGTGTATTTAGG 57.709 40.000 0.00 0.00 0.00 2.69
196 197 4.962155 ACTGATGGCTAGTGTATTTAGGC 58.038 43.478 0.00 0.00 42.30 3.93
197 198 4.202367 ACTGATGGCTAGTGTATTTAGGCC 60.202 45.833 0.00 0.00 41.54 5.19
200 201 4.085357 TGGCTAGTGTATTTAGGCCATG 57.915 45.455 5.01 0.00 43.62 3.66
201 202 3.458118 TGGCTAGTGTATTTAGGCCATGT 59.542 43.478 5.01 0.00 43.62 3.21
202 203 4.080015 TGGCTAGTGTATTTAGGCCATGTT 60.080 41.667 5.01 0.00 43.62 2.71
203 204 4.887655 GGCTAGTGTATTTAGGCCATGTTT 59.112 41.667 5.01 0.00 39.38 2.83
204 205 5.221048 GGCTAGTGTATTTAGGCCATGTTTG 60.221 44.000 5.01 0.00 39.38 2.93
205 206 5.221048 GCTAGTGTATTTAGGCCATGTTTGG 60.221 44.000 5.01 0.00 46.66 3.28
206 207 4.672899 AGTGTATTTAGGCCATGTTTGGT 58.327 39.130 5.01 0.00 45.57 3.67
207 208 5.083821 AGTGTATTTAGGCCATGTTTGGTT 58.916 37.500 5.01 0.00 45.57 3.67
208 209 5.185056 AGTGTATTTAGGCCATGTTTGGTTC 59.815 40.000 5.01 0.00 45.57 3.62
209 210 5.047660 GTGTATTTAGGCCATGTTTGGTTCA 60.048 40.000 5.01 0.00 45.57 3.18
210 211 5.719085 TGTATTTAGGCCATGTTTGGTTCAT 59.281 36.000 5.01 0.00 45.57 2.57
211 212 6.892456 TGTATTTAGGCCATGTTTGGTTCATA 59.108 34.615 5.01 0.00 45.57 2.15
212 213 6.865834 ATTTAGGCCATGTTTGGTTCATAA 57.134 33.333 5.01 0.00 45.57 1.90
213 214 5.913137 TTAGGCCATGTTTGGTTCATAAG 57.087 39.130 5.01 0.00 45.57 1.73
214 215 3.778265 AGGCCATGTTTGGTTCATAAGT 58.222 40.909 5.01 0.00 45.57 2.24
215 216 4.159557 AGGCCATGTTTGGTTCATAAGTT 58.840 39.130 5.01 0.00 45.57 2.66
216 217 4.220602 AGGCCATGTTTGGTTCATAAGTTC 59.779 41.667 5.01 0.00 45.57 3.01
217 218 4.220602 GGCCATGTTTGGTTCATAAGTTCT 59.779 41.667 0.00 0.00 45.57 3.01
218 219 5.417580 GGCCATGTTTGGTTCATAAGTTCTA 59.582 40.000 0.00 0.00 45.57 2.10
219 220 6.404734 GGCCATGTTTGGTTCATAAGTTCTAG 60.405 42.308 0.00 0.00 45.57 2.43
220 221 6.404734 GCCATGTTTGGTTCATAAGTTCTAGG 60.405 42.308 0.00 0.00 45.57 3.02
221 222 6.884295 CCATGTTTGGTTCATAAGTTCTAGGA 59.116 38.462 0.00 0.00 38.30 2.94
222 223 7.148239 CCATGTTTGGTTCATAAGTTCTAGGAC 60.148 40.741 0.00 0.00 38.30 3.85
223 224 7.074653 TGTTTGGTTCATAAGTTCTAGGACT 57.925 36.000 0.00 0.00 0.00 3.85
224 225 7.514721 TGTTTGGTTCATAAGTTCTAGGACTT 58.485 34.615 20.28 20.28 42.27 3.01
225 226 7.996644 TGTTTGGTTCATAAGTTCTAGGACTTT 59.003 33.333 21.55 7.19 40.24 2.66
226 227 8.847196 GTTTGGTTCATAAGTTCTAGGACTTTT 58.153 33.333 21.55 11.27 40.24 2.27
227 228 8.990163 TTGGTTCATAAGTTCTAGGACTTTTT 57.010 30.769 21.55 7.41 40.24 1.94
255 256 8.296211 AGACCTAACTTATAAGTCTCAAGTCC 57.704 38.462 18.28 7.79 38.57 3.85
256 257 7.342541 AGACCTAACTTATAAGTCTCAAGTCCC 59.657 40.741 18.28 3.22 38.57 4.46
257 258 7.190501 ACCTAACTTATAAGTCTCAAGTCCCT 58.809 38.462 18.28 1.87 38.57 4.20
258 259 8.342270 ACCTAACTTATAAGTCTCAAGTCCCTA 58.658 37.037 18.28 2.92 38.57 3.53
259 260 9.198475 CCTAACTTATAAGTCTCAAGTCCCTAA 57.802 37.037 18.28 0.00 38.57 2.69
263 264 9.945904 ACTTATAAGTCTCAAGTCCCTAAAAAG 57.054 33.333 12.50 0.00 32.86 2.27
264 265 9.945904 CTTATAAGTCTCAAGTCCCTAAAAAGT 57.054 33.333 4.18 0.00 0.00 2.66
265 266 9.939802 TTATAAGTCTCAAGTCCCTAAAAAGTC 57.060 33.333 0.00 0.00 0.00 3.01
266 267 5.230323 AGTCTCAAGTCCCTAAAAAGTCC 57.770 43.478 0.00 0.00 0.00 3.85
267 268 4.041815 AGTCTCAAGTCCCTAAAAAGTCCC 59.958 45.833 0.00 0.00 0.00 4.46
268 269 4.041815 GTCTCAAGTCCCTAAAAAGTCCCT 59.958 45.833 0.00 0.00 0.00 4.20
269 270 5.247792 GTCTCAAGTCCCTAAAAAGTCCCTA 59.752 44.000 0.00 0.00 0.00 3.53
270 271 5.247792 TCTCAAGTCCCTAAAAAGTCCCTAC 59.752 44.000 0.00 0.00 0.00 3.18
271 272 4.287845 TCAAGTCCCTAAAAAGTCCCTACC 59.712 45.833 0.00 0.00 0.00 3.18
272 273 4.157668 AGTCCCTAAAAAGTCCCTACCT 57.842 45.455 0.00 0.00 0.00 3.08
273 274 3.844804 AGTCCCTAAAAAGTCCCTACCTG 59.155 47.826 0.00 0.00 0.00 4.00
274 275 3.586174 GTCCCTAAAAAGTCCCTACCTGT 59.414 47.826 0.00 0.00 0.00 4.00
275 276 4.042560 GTCCCTAAAAAGTCCCTACCTGTT 59.957 45.833 0.00 0.00 0.00 3.16
276 277 4.666431 TCCCTAAAAAGTCCCTACCTGTTT 59.334 41.667 0.00 0.00 0.00 2.83
277 278 5.134850 TCCCTAAAAAGTCCCTACCTGTTTT 59.865 40.000 0.00 0.00 0.00 2.43
278 279 5.243060 CCCTAAAAAGTCCCTACCTGTTTTG 59.757 44.000 0.00 0.00 0.00 2.44
279 280 5.831525 CCTAAAAAGTCCCTACCTGTTTTGT 59.168 40.000 0.00 0.00 0.00 2.83
280 281 6.322969 CCTAAAAAGTCCCTACCTGTTTTGTT 59.677 38.462 0.00 0.00 0.00 2.83
281 282 5.847111 AAAAGTCCCTACCTGTTTTGTTC 57.153 39.130 0.00 0.00 0.00 3.18
282 283 3.503800 AGTCCCTACCTGTTTTGTTCC 57.496 47.619 0.00 0.00 0.00 3.62
283 284 3.053826 AGTCCCTACCTGTTTTGTTCCT 58.946 45.455 0.00 0.00 0.00 3.36
284 285 3.146847 GTCCCTACCTGTTTTGTTCCTG 58.853 50.000 0.00 0.00 0.00 3.86
285 286 2.107552 TCCCTACCTGTTTTGTTCCTGG 59.892 50.000 0.00 0.00 0.00 4.45
286 287 2.514803 CCTACCTGTTTTGTTCCTGGG 58.485 52.381 0.00 0.00 0.00 4.45
287 288 2.107552 CCTACCTGTTTTGTTCCTGGGA 59.892 50.000 0.00 0.00 0.00 4.37
288 289 2.067365 ACCTGTTTTGTTCCTGGGAC 57.933 50.000 0.00 0.00 0.00 4.46
289 290 1.569072 ACCTGTTTTGTTCCTGGGACT 59.431 47.619 6.69 0.00 0.00 3.85
290 291 2.024369 ACCTGTTTTGTTCCTGGGACTT 60.024 45.455 6.69 0.00 0.00 3.01
291 292 3.203487 ACCTGTTTTGTTCCTGGGACTTA 59.797 43.478 6.69 0.00 0.00 2.24
292 293 4.141018 ACCTGTTTTGTTCCTGGGACTTAT 60.141 41.667 6.69 0.00 0.00 1.73
293 294 5.073965 ACCTGTTTTGTTCCTGGGACTTATA 59.926 40.000 6.69 0.00 0.00 0.98
294 295 6.007703 CCTGTTTTGTTCCTGGGACTTATAA 58.992 40.000 6.69 0.00 0.00 0.98
295 296 6.151144 CCTGTTTTGTTCCTGGGACTTATAAG 59.849 42.308 11.05 11.05 0.00 1.73
296 297 6.607019 TGTTTTGTTCCTGGGACTTATAAGT 58.393 36.000 18.05 18.05 43.16 2.24
319 320 9.448587 AAGTCCCTATAAGACCATATTACAACT 57.551 33.333 0.09 0.00 34.67 3.16
340 341 9.145442 ACAACTATAAGTCCTTATAAGTCCCTC 57.855 37.037 11.50 0.00 37.51 4.30
341 342 8.586744 CAACTATAAGTCCTTATAAGTCCCTCC 58.413 40.741 11.50 0.00 37.51 4.30
342 343 8.071235 ACTATAAGTCCTTATAAGTCCCTCCT 57.929 38.462 11.50 0.00 37.51 3.69
343 344 8.521301 ACTATAAGTCCTTATAAGTCCCTCCTT 58.479 37.037 11.50 6.34 37.51 3.36
344 345 5.959583 AAGTCCTTATAAGTCCCTCCTTG 57.040 43.478 11.50 0.00 0.00 3.61
345 346 5.222278 AGTCCTTATAAGTCCCTCCTTGA 57.778 43.478 11.50 0.00 0.00 3.02
346 347 5.212745 AGTCCTTATAAGTCCCTCCTTGAG 58.787 45.833 11.50 0.00 0.00 3.02
347 348 5.043281 AGTCCTTATAAGTCCCTCCTTGAGA 60.043 44.000 11.50 0.00 0.00 3.27
348 349 5.303333 GTCCTTATAAGTCCCTCCTTGAGAG 59.697 48.000 11.50 0.00 42.83 3.20
349 350 5.043281 TCCTTATAAGTCCCTCCTTGAGAGT 60.043 44.000 11.50 0.00 41.47 3.24
350 351 5.303333 CCTTATAAGTCCCTCCTTGAGAGTC 59.697 48.000 11.50 0.00 41.47 3.36
351 352 4.618378 ATAAGTCCCTCCTTGAGAGTCT 57.382 45.455 0.00 0.00 41.47 3.24
352 353 3.268034 AAGTCCCTCCTTGAGAGTCTT 57.732 47.619 0.00 0.00 41.47 3.01
353 354 4.405756 AAGTCCCTCCTTGAGAGTCTTA 57.594 45.455 0.00 0.00 41.47 2.10
354 355 4.618378 AGTCCCTCCTTGAGAGTCTTAT 57.382 45.455 0.00 0.00 41.47 1.73
355 356 4.954089 AGTCCCTCCTTGAGAGTCTTATT 58.046 43.478 0.00 0.00 41.47 1.40
356 357 5.346270 AGTCCCTCCTTGAGAGTCTTATTT 58.654 41.667 0.00 0.00 41.47 1.40
357 358 5.788014 AGTCCCTCCTTGAGAGTCTTATTTT 59.212 40.000 0.00 0.00 41.47 1.82
358 359 6.960542 AGTCCCTCCTTGAGAGTCTTATTTTA 59.039 38.462 0.00 0.00 41.47 1.52
359 360 7.625682 AGTCCCTCCTTGAGAGTCTTATTTTAT 59.374 37.037 0.00 0.00 41.47 1.40
360 361 8.925338 GTCCCTCCTTGAGAGTCTTATTTTATA 58.075 37.037 0.00 0.00 41.47 0.98
361 362 9.502035 TCCCTCCTTGAGAGTCTTATTTTATAA 57.498 33.333 0.00 0.00 41.47 0.98
362 363 9.771534 CCCTCCTTGAGAGTCTTATTTTATAAG 57.228 37.037 0.00 0.00 41.47 1.73
366 367 9.549078 CCTTGAGAGTCTTATTTTATAAGTCCC 57.451 37.037 0.00 0.00 0.00 4.46
383 384 8.706322 ATAAGTCCCAAATGAACACTTTAAGT 57.294 30.769 0.00 0.00 0.00 2.24
384 385 6.635030 AGTCCCAAATGAACACTTTAAGTC 57.365 37.500 0.00 0.00 0.00 3.01
385 386 6.365520 AGTCCCAAATGAACACTTTAAGTCT 58.634 36.000 0.00 0.00 0.00 3.24
386 387 6.833933 AGTCCCAAATGAACACTTTAAGTCTT 59.166 34.615 0.00 0.00 0.00 3.01
387 388 7.342026 AGTCCCAAATGAACACTTTAAGTCTTT 59.658 33.333 0.00 0.00 0.00 2.52
388 389 8.626526 GTCCCAAATGAACACTTTAAGTCTTTA 58.373 33.333 0.00 0.00 0.00 1.85
389 390 9.362151 TCCCAAATGAACACTTTAAGTCTTTAT 57.638 29.630 0.00 0.00 0.00 1.40
396 397 9.498176 TGAACACTTTAAGTCTTTATAAGTCCC 57.502 33.333 0.00 0.00 0.00 4.46
397 398 9.722184 GAACACTTTAAGTCTTTATAAGTCCCT 57.278 33.333 0.00 0.00 0.00 4.20
398 399 9.722184 AACACTTTAAGTCTTTATAAGTCCCTC 57.278 33.333 0.00 0.00 0.00 4.30
399 400 8.319881 ACACTTTAAGTCTTTATAAGTCCCTCC 58.680 37.037 0.00 0.00 0.00 4.30
400 401 8.541234 CACTTTAAGTCTTTATAAGTCCCTCCT 58.459 37.037 0.00 0.00 0.00 3.69
401 402 8.541234 ACTTTAAGTCTTTATAAGTCCCTCCTG 58.459 37.037 0.00 0.00 0.00 3.86
402 403 8.445361 TTTAAGTCTTTATAAGTCCCTCCTGT 57.555 34.615 0.00 0.00 0.00 4.00
403 404 6.954352 AAGTCTTTATAAGTCCCTCCTGTT 57.046 37.500 0.00 0.00 0.00 3.16
404 405 6.954352 AGTCTTTATAAGTCCCTCCTGTTT 57.046 37.500 0.00 0.00 0.00 2.83
405 406 6.712276 AGTCTTTATAAGTCCCTCCTGTTTG 58.288 40.000 0.00 0.00 0.00 2.93
406 407 5.880887 GTCTTTATAAGTCCCTCCTGTTTGG 59.119 44.000 0.00 0.00 37.10 3.28
407 408 5.550403 TCTTTATAAGTCCCTCCTGTTTGGT 59.450 40.000 0.00 0.00 37.07 3.67
408 409 5.853572 TTATAAGTCCCTCCTGTTTGGTT 57.146 39.130 0.00 0.00 37.07 3.67
409 410 4.741928 ATAAGTCCCTCCTGTTTGGTTT 57.258 40.909 0.00 0.00 37.07 3.27
410 411 5.853572 ATAAGTCCCTCCTGTTTGGTTTA 57.146 39.130 0.00 0.00 37.07 2.01
411 412 3.790089 AGTCCCTCCTGTTTGGTTTAG 57.210 47.619 0.00 0.00 37.07 1.85
412 413 3.323775 AGTCCCTCCTGTTTGGTTTAGA 58.676 45.455 0.00 0.00 37.07 2.10
413 414 3.916989 AGTCCCTCCTGTTTGGTTTAGAT 59.083 43.478 0.00 0.00 37.07 1.98
414 415 4.010349 GTCCCTCCTGTTTGGTTTAGATG 58.990 47.826 0.00 0.00 37.07 2.90
415 416 3.913799 TCCCTCCTGTTTGGTTTAGATGA 59.086 43.478 0.00 0.00 37.07 2.92
416 417 4.019321 TCCCTCCTGTTTGGTTTAGATGAG 60.019 45.833 0.00 0.00 37.07 2.90
417 418 4.019321 CCCTCCTGTTTGGTTTAGATGAGA 60.019 45.833 0.00 0.00 37.07 3.27
418 419 4.938226 CCTCCTGTTTGGTTTAGATGAGAC 59.062 45.833 0.00 0.00 37.07 3.36
419 420 5.280215 CCTCCTGTTTGGTTTAGATGAGACT 60.280 44.000 0.00 0.00 37.07 3.24
420 421 6.187727 TCCTGTTTGGTTTAGATGAGACTT 57.812 37.500 0.00 0.00 37.07 3.01
421 422 7.311092 TCCTGTTTGGTTTAGATGAGACTTA 57.689 36.000 0.00 0.00 37.07 2.24
422 423 7.918076 TCCTGTTTGGTTTAGATGAGACTTAT 58.082 34.615 0.00 0.00 37.07 1.73
423 424 9.042450 TCCTGTTTGGTTTAGATGAGACTTATA 57.958 33.333 0.00 0.00 37.07 0.98
424 425 9.319143 CCTGTTTGGTTTAGATGAGACTTATAG 57.681 37.037 0.00 0.00 0.00 1.31
425 426 9.319143 CTGTTTGGTTTAGATGAGACTTATAGG 57.681 37.037 0.00 0.00 0.00 2.57
426 427 8.265055 TGTTTGGTTTAGATGAGACTTATAGGG 58.735 37.037 0.00 0.00 0.00 3.53
427 428 8.483758 GTTTGGTTTAGATGAGACTTATAGGGA 58.516 37.037 0.00 0.00 0.00 4.20
428 429 7.598759 TGGTTTAGATGAGACTTATAGGGAC 57.401 40.000 0.00 0.00 0.00 4.46
429 430 7.363031 TGGTTTAGATGAGACTTATAGGGACT 58.637 38.462 0.00 0.00 46.37 3.85
430 431 7.844779 TGGTTTAGATGAGACTTATAGGGACTT 59.155 37.037 0.00 0.00 41.75 3.01
431 432 8.706521 GGTTTAGATGAGACTTATAGGGACTTT 58.293 37.037 0.00 0.00 41.75 2.66
456 457 8.640063 TTTTAAGTCCCTAAACCAATAAGTCC 57.360 34.615 0.00 0.00 0.00 3.85
457 458 4.857130 AGTCCCTAAACCAATAAGTCCC 57.143 45.455 0.00 0.00 0.00 4.46
458 459 4.445564 AGTCCCTAAACCAATAAGTCCCT 58.554 43.478 0.00 0.00 0.00 4.20
459 460 5.606761 AGTCCCTAAACCAATAAGTCCCTA 58.393 41.667 0.00 0.00 0.00 3.53
460 461 6.034003 AGTCCCTAAACCAATAAGTCCCTAA 58.966 40.000 0.00 0.00 0.00 2.69
461 462 6.506413 AGTCCCTAAACCAATAAGTCCCTAAA 59.494 38.462 0.00 0.00 0.00 1.85
462 463 7.018851 AGTCCCTAAACCAATAAGTCCCTAAAA 59.981 37.037 0.00 0.00 0.00 1.52
463 464 7.670979 GTCCCTAAACCAATAAGTCCCTAAAAA 59.329 37.037 0.00 0.00 0.00 1.94
464 465 7.670979 TCCCTAAACCAATAAGTCCCTAAAAAC 59.329 37.037 0.00 0.00 0.00 2.43
465 466 7.452189 CCCTAAACCAATAAGTCCCTAAAAACA 59.548 37.037 0.00 0.00 0.00 2.83
466 467 8.862085 CCTAAACCAATAAGTCCCTAAAAACAA 58.138 33.333 0.00 0.00 0.00 2.83
468 469 8.951787 AAACCAATAAGTCCCTAAAAACAAAC 57.048 30.769 0.00 0.00 0.00 2.93
469 470 7.663043 ACCAATAAGTCCCTAAAAACAAACA 57.337 32.000 0.00 0.00 0.00 2.83
470 471 7.494211 ACCAATAAGTCCCTAAAAACAAACAC 58.506 34.615 0.00 0.00 0.00 3.32
471 472 6.926826 CCAATAAGTCCCTAAAAACAAACACC 59.073 38.462 0.00 0.00 0.00 4.16
472 473 6.659745 ATAAGTCCCTAAAAACAAACACCC 57.340 37.500 0.00 0.00 0.00 4.61
473 474 4.259933 AGTCCCTAAAAACAAACACCCT 57.740 40.909 0.00 0.00 0.00 4.34
474 475 4.212716 AGTCCCTAAAAACAAACACCCTC 58.787 43.478 0.00 0.00 0.00 4.30
478 479 6.016527 GTCCCTAAAAACAAACACCCTCTTAG 60.017 42.308 0.00 0.00 0.00 2.18
512 514 6.930731 TCCAAAAAGTAAGCAAAAGAACACT 58.069 32.000 0.00 0.00 0.00 3.55
517 519 8.683550 AAAAGTAAGCAAAAGAACACTAACAC 57.316 30.769 0.00 0.00 0.00 3.32
587 589 6.919662 GGATGATACAATAATGGCAAGTGTTG 59.080 38.462 0.00 3.92 0.00 3.33
601 603 2.978010 GTTGGGTGTGAGTGGCCG 60.978 66.667 0.00 0.00 0.00 6.13
605 607 4.927782 GGTGTGAGTGGCCGTGCA 62.928 66.667 0.00 0.00 0.00 4.57
606 608 2.669569 GTGTGAGTGGCCGTGCAT 60.670 61.111 0.00 0.00 0.00 3.96
608 610 4.107051 GTGAGTGGCCGTGCATGC 62.107 66.667 11.82 11.82 0.00 4.06
618 620 1.070821 CCGTGCATGCCTGTATATCG 58.929 55.000 16.68 6.90 0.00 2.92
619 621 0.439985 CGTGCATGCCTGTATATCGC 59.560 55.000 16.68 0.00 0.00 4.58
623 625 1.728971 GCATGCCTGTATATCGCACTC 59.271 52.381 6.36 0.00 34.87 3.51
624 626 2.867647 GCATGCCTGTATATCGCACTCA 60.868 50.000 6.36 0.00 34.87 3.41
629 631 2.545952 CCTGTATATCGCACTCACACCC 60.546 54.545 0.00 0.00 0.00 4.61
632 634 1.485124 ATATCGCACTCACACCCAGA 58.515 50.000 0.00 0.00 0.00 3.86
633 635 0.817654 TATCGCACTCACACCCAGAG 59.182 55.000 0.00 0.00 39.04 3.35
635 637 0.900182 TCGCACTCACACCCAGAGAT 60.900 55.000 0.00 0.00 36.91 2.75
636 638 0.817654 CGCACTCACACCCAGAGATA 59.182 55.000 0.00 0.00 36.91 1.98
637 639 1.202348 CGCACTCACACCCAGAGATAG 60.202 57.143 0.00 0.00 36.91 2.08
638 640 1.827969 GCACTCACACCCAGAGATAGT 59.172 52.381 0.00 0.00 36.91 2.12
639 641 2.159170 GCACTCACACCCAGAGATAGTC 60.159 54.545 0.00 0.00 36.91 2.59
640 642 3.092301 CACTCACACCCAGAGATAGTCA 58.908 50.000 0.00 0.00 36.91 3.41
641 643 3.093057 ACTCACACCCAGAGATAGTCAC 58.907 50.000 0.00 0.00 36.91 3.67
642 644 2.428890 CTCACACCCAGAGATAGTCACC 59.571 54.545 0.00 0.00 35.09 4.02
643 645 1.482593 CACACCCAGAGATAGTCACCC 59.517 57.143 0.00 0.00 0.00 4.61
645 647 1.759445 CACCCAGAGATAGTCACCCAG 59.241 57.143 0.00 0.00 0.00 4.45
647 649 1.489481 CCAGAGATAGTCACCCAGCA 58.511 55.000 0.00 0.00 0.00 4.41
648 650 2.045524 CCAGAGATAGTCACCCAGCAT 58.954 52.381 0.00 0.00 0.00 3.79
649 651 3.234353 CCAGAGATAGTCACCCAGCATA 58.766 50.000 0.00 0.00 0.00 3.14
650 652 3.837146 CCAGAGATAGTCACCCAGCATAT 59.163 47.826 0.00 0.00 0.00 1.78
662 664 3.138839 ACCCAGCATATGACCATTCATGA 59.861 43.478 6.97 0.00 42.79 3.07
664 666 4.770531 CCCAGCATATGACCATTCATGATT 59.229 41.667 6.97 0.00 42.79 2.57
665 667 5.105877 CCCAGCATATGACCATTCATGATTC 60.106 44.000 6.97 0.00 42.79 2.52
666 668 5.475564 CCAGCATATGACCATTCATGATTCA 59.524 40.000 6.97 0.00 42.79 2.57
667 669 6.152831 CCAGCATATGACCATTCATGATTCAT 59.847 38.462 6.97 5.65 42.79 2.57
675 677 5.601583 CCATTCATGATTCATGGTTGGAA 57.398 39.130 27.50 16.52 41.88 3.53
676 678 5.353938 CCATTCATGATTCATGGTTGGAAC 58.646 41.667 27.50 0.00 41.88 3.62
677 679 4.700268 TTCATGATTCATGGTTGGAACG 57.300 40.909 23.07 0.00 41.66 3.95
678 680 3.949132 TCATGATTCATGGTTGGAACGA 58.051 40.909 23.07 1.48 41.66 3.85
679 681 4.525996 TCATGATTCATGGTTGGAACGAT 58.474 39.130 23.07 0.00 41.66 3.73
680 682 4.576053 TCATGATTCATGGTTGGAACGATC 59.424 41.667 23.07 0.00 41.66 3.69
681 683 3.949132 TGATTCATGGTTGGAACGATCA 58.051 40.909 0.00 0.00 0.00 2.92
682 684 4.331108 TGATTCATGGTTGGAACGATCAA 58.669 39.130 0.00 0.00 0.00 2.57
683 685 4.764308 TGATTCATGGTTGGAACGATCAAA 59.236 37.500 0.00 0.00 0.00 2.69
684 686 5.242615 TGATTCATGGTTGGAACGATCAAAA 59.757 36.000 0.00 0.00 0.00 2.44
685 687 4.764679 TCATGGTTGGAACGATCAAAAG 57.235 40.909 0.00 0.00 0.00 2.27
686 688 4.141287 TCATGGTTGGAACGATCAAAAGT 58.859 39.130 0.00 0.00 0.00 2.66
687 689 4.215399 TCATGGTTGGAACGATCAAAAGTC 59.785 41.667 0.00 0.00 0.00 3.01
688 690 3.546724 TGGTTGGAACGATCAAAAGTCA 58.453 40.909 0.00 0.00 0.00 3.41
689 691 3.948473 TGGTTGGAACGATCAAAAGTCAA 59.052 39.130 0.00 0.00 0.00 3.18
690 692 4.582656 TGGTTGGAACGATCAAAAGTCAAT 59.417 37.500 0.00 0.00 0.00 2.57
691 693 4.917415 GGTTGGAACGATCAAAAGTCAATG 59.083 41.667 0.00 0.00 0.00 2.82
692 694 5.278266 GGTTGGAACGATCAAAAGTCAATGA 60.278 40.000 0.00 0.00 0.00 2.57
693 695 5.356882 TGGAACGATCAAAAGTCAATGAC 57.643 39.130 5.02 5.02 0.00 3.06
694 696 4.084066 TGGAACGATCAAAAGTCAATGACG 60.084 41.667 7.83 0.00 37.67 4.35
695 697 3.455619 ACGATCAAAAGTCAATGACGC 57.544 42.857 7.83 0.00 37.67 5.19
696 698 2.159841 ACGATCAAAAGTCAATGACGCG 60.160 45.455 3.53 3.53 37.67 6.01
1020 1025 0.619832 TGGATCAGCTCCTCCTGCTT 60.620 55.000 11.45 0.00 45.21 3.91
1164 1169 1.517257 CGCAGACGCCTTCTCGAAT 60.517 57.895 0.00 0.00 28.96 3.34
1237 1242 1.070289 GGAACGAGAACCTCAACACCT 59.930 52.381 0.00 0.00 0.00 4.00
1426 1437 3.083349 AGCACCTCTATGGCGCCA 61.083 61.111 34.80 34.80 44.60 5.69
1574 1585 0.679960 TCCGTGATGGAGAAGCTCGA 60.680 55.000 0.00 0.00 43.74 4.04
1654 1665 3.554716 CTCCCATCGAGGCATGGA 58.445 61.111 4.30 0.00 45.79 3.41
1773 1790 2.024871 CGCGCTCTTAGGGACGAG 59.975 66.667 5.56 0.00 32.65 4.18
1794 1811 1.144716 GATGGTGCGGCTGATCTCA 59.855 57.895 0.00 0.00 0.00 3.27
1887 1904 1.323271 CGGAGGTGCAGGAGAAGCTA 61.323 60.000 0.00 0.00 29.02 3.32
2046 2069 3.036429 GCTGGTCGGAGGAATGGCT 62.036 63.158 0.00 0.00 0.00 4.75
2076 2099 2.578981 GCCGGCGACTTCTACGTC 60.579 66.667 12.58 0.00 0.00 4.34
2088 2111 4.246458 ACTTCTACGTCAATTTCTCTGCC 58.754 43.478 0.00 0.00 0.00 4.85
2091 2114 0.320374 ACGTCAATTTCTCTGCCGGA 59.680 50.000 5.05 0.00 0.00 5.14
2131 2154 2.541466 AGATATGGAAGGATCCCGACC 58.459 52.381 8.55 10.19 45.95 4.79
2335 2358 1.375523 CCGACTGGCACTAACACCC 60.376 63.158 0.00 0.00 0.00 4.61
2382 2405 3.795688 TTCAAGGTGATGAAGAAGCCT 57.204 42.857 0.00 0.00 34.50 4.58
2386 2409 4.532126 TCAAGGTGATGAAGAAGCCTCTTA 59.468 41.667 0.00 0.00 42.19 2.10
2391 3546 0.973632 TGAAGAAGCCTCTTACCGCA 59.026 50.000 0.00 0.00 42.19 5.69
2502 3660 1.144936 GTTGCAGCCGAGCCTAGAT 59.855 57.895 0.00 0.00 0.00 1.98
2516 3674 1.212616 CTAGATCCGCGGAAAGCTTG 58.787 55.000 34.66 23.98 45.59 4.01
2579 3757 4.436079 AGGAACCTATCTAGTTTGGGTGT 58.564 43.478 6.30 0.00 0.00 4.16
2585 3763 3.629142 ATCTAGTTTGGGTGTGGCTAC 57.371 47.619 0.00 0.00 0.00 3.58
2592 3770 1.116536 TGGGTGTGGCTACGTCTCAA 61.117 55.000 0.00 0.00 0.00 3.02
2596 3774 1.732259 GTGTGGCTACGTCTCAATTGG 59.268 52.381 5.42 0.00 0.00 3.16
2699 3877 5.232610 GGATCTCCGTATAAGATACCACG 57.767 47.826 0.00 0.00 33.64 4.94
2706 3884 9.322773 TCTCCGTATAAGATACCACGAATATAG 57.677 37.037 0.00 0.00 36.53 1.31
2713 3891 6.590234 AGATACCACGAATATAGCATGACA 57.410 37.500 0.00 0.00 0.00 3.58
2714 3892 7.175347 AGATACCACGAATATAGCATGACAT 57.825 36.000 0.00 0.00 0.00 3.06
2715 3893 7.038048 AGATACCACGAATATAGCATGACATG 58.962 38.462 11.27 11.27 0.00 3.21
2716 3894 4.960938 ACCACGAATATAGCATGACATGT 58.039 39.130 16.62 0.00 0.00 3.21
2717 3895 4.751600 ACCACGAATATAGCATGACATGTG 59.248 41.667 16.62 3.96 0.00 3.21
2718 3896 4.751600 CCACGAATATAGCATGACATGTGT 59.248 41.667 16.62 7.38 0.00 3.72
2720 3898 6.238456 CCACGAATATAGCATGACATGTGTTT 60.238 38.462 16.62 4.53 0.00 2.83
2721 3899 7.188834 CACGAATATAGCATGACATGTGTTTT 58.811 34.615 16.62 5.17 0.00 2.43
2722 3900 7.697710 CACGAATATAGCATGACATGTGTTTTT 59.302 33.333 16.62 6.12 0.00 1.94
2760 4453 3.425162 TTTTTCTCCTTCCCTCAGCTC 57.575 47.619 0.00 0.00 0.00 4.09
2763 4456 2.283894 TCCTTCCCTCAGCTCGCA 60.284 61.111 0.00 0.00 0.00 5.10
2799 4505 1.244816 CCATGACGAGCCGACCTATA 58.755 55.000 0.00 0.00 0.00 1.31
2954 4661 0.107017 ATCTCCAGATGCCGGGTTTG 60.107 55.000 2.18 0.00 32.68 2.93
2966 4673 2.297937 GGGTTTGATCTCCCGGTCT 58.702 57.895 0.00 0.00 33.97 3.85
2967 4674 0.178301 GGGTTTGATCTCCCGGTCTC 59.822 60.000 0.00 0.00 33.97 3.36
2968 4675 0.178301 GGTTTGATCTCCCGGTCTCC 59.822 60.000 0.00 0.00 0.00 3.71
2969 4676 1.196012 GTTTGATCTCCCGGTCTCCT 58.804 55.000 0.00 0.00 0.00 3.69
2970 4677 1.134670 GTTTGATCTCCCGGTCTCCTG 60.135 57.143 0.00 0.00 0.00 3.86
2971 4678 1.330655 TTGATCTCCCGGTCTCCTGC 61.331 60.000 0.00 0.00 0.00 4.85
2972 4679 2.835431 ATCTCCCGGTCTCCTGCG 60.835 66.667 0.00 0.00 0.00 5.18
2978 4685 4.379243 CGGTCTCCTGCGCAACCT 62.379 66.667 22.87 0.00 0.00 3.50
2979 4686 2.435059 GGTCTCCTGCGCAACCTC 60.435 66.667 19.44 6.28 0.00 3.85
3006 4713 3.560896 ACACATTGCCAAAATCACTTTGC 59.439 39.130 0.00 0.00 42.74 3.68
3020 4727 5.029650 TCACTTTGCTGTGTTATTTAGCG 57.970 39.130 0.00 0.00 40.24 4.26
3030 4737 6.425577 TGTGTTATTTAGCGGGTACATTTC 57.574 37.500 0.00 0.00 0.00 2.17
3034 4741 4.870221 ATTTAGCGGGTACATTTCGTTC 57.130 40.909 0.00 0.00 0.00 3.95
3036 4743 0.322322 AGCGGGTACATTTCGTTCCA 59.678 50.000 0.00 0.00 36.79 3.53
3061 4768 1.638529 AGAAGGCTATCTCATCCCGG 58.361 55.000 0.00 0.00 0.00 5.73
3151 4858 2.549754 TGAGCAGTGCTAAGCTGTTTTC 59.450 45.455 19.77 1.89 42.04 2.29
3157 4864 1.194547 TGCTAAGCTGTTTTCGAAGCG 59.805 47.619 0.00 0.00 44.34 4.68
3170 4877 0.439985 CGAAGCGTCTTGGTGTGATG 59.560 55.000 0.00 0.00 0.00 3.07
3172 4879 0.108585 AAGCGTCTTGGTGTGATGGT 59.891 50.000 0.00 0.00 33.27 3.55
3209 4916 4.176271 GCTTTGCCATCTACCATTTTGTC 58.824 43.478 0.00 0.00 0.00 3.18
3254 4961 2.509052 TTCATGGATCGGCTAGTTCG 57.491 50.000 0.00 0.00 0.00 3.95
3349 5056 2.540265 AGTGACCAAGACTGCTTCTG 57.460 50.000 0.00 0.00 33.46 3.02
3356 5063 2.497675 CCAAGACTGCTTCTGCTACCTA 59.502 50.000 0.00 0.00 40.48 3.08
3357 5064 3.516615 CAAGACTGCTTCTGCTACCTAC 58.483 50.000 0.00 0.00 40.48 3.18
3358 5065 1.746220 AGACTGCTTCTGCTACCTACG 59.254 52.381 0.00 0.00 40.48 3.51
3359 5066 0.173708 ACTGCTTCTGCTACCTACGC 59.826 55.000 0.00 0.00 40.48 4.42
3360 5067 0.173481 CTGCTTCTGCTACCTACGCA 59.827 55.000 0.00 0.00 40.48 5.24
3361 5068 0.824109 TGCTTCTGCTACCTACGCAT 59.176 50.000 0.00 0.00 40.48 4.73
3362 5069 2.028876 TGCTTCTGCTACCTACGCATA 58.971 47.619 0.00 0.00 40.48 3.14
3363 5070 2.628178 TGCTTCTGCTACCTACGCATAT 59.372 45.455 0.00 0.00 40.48 1.78
3364 5071 3.824443 TGCTTCTGCTACCTACGCATATA 59.176 43.478 0.00 0.00 40.48 0.86
3365 5072 4.082733 TGCTTCTGCTACCTACGCATATAG 60.083 45.833 0.00 0.00 40.48 1.31
3366 5073 4.156190 GCTTCTGCTACCTACGCATATAGA 59.844 45.833 0.00 0.00 36.70 1.98
3367 5074 5.624344 TTCTGCTACCTACGCATATAGAC 57.376 43.478 0.00 0.00 36.70 2.59
3368 5075 4.907809 TCTGCTACCTACGCATATAGACT 58.092 43.478 0.00 0.00 36.70 3.24
3369 5076 4.936411 TCTGCTACCTACGCATATAGACTC 59.064 45.833 0.00 0.00 36.70 3.36
3370 5077 4.648651 TGCTACCTACGCATATAGACTCA 58.351 43.478 0.00 0.00 31.40 3.41
3371 5078 5.254115 TGCTACCTACGCATATAGACTCAT 58.746 41.667 0.00 0.00 31.40 2.90
3372 5079 5.354513 TGCTACCTACGCATATAGACTCATC 59.645 44.000 0.00 0.00 31.40 2.92
3373 5080 5.354513 GCTACCTACGCATATAGACTCATCA 59.645 44.000 0.00 0.00 0.00 3.07
3374 5081 6.038825 GCTACCTACGCATATAGACTCATCAT 59.961 42.308 0.00 0.00 0.00 2.45
3375 5082 6.443934 ACCTACGCATATAGACTCATCATC 57.556 41.667 0.00 0.00 0.00 2.92
3376 5083 6.184068 ACCTACGCATATAGACTCATCATCT 58.816 40.000 0.00 0.00 0.00 2.90
3377 5084 6.661377 ACCTACGCATATAGACTCATCATCTT 59.339 38.462 0.00 0.00 0.00 2.40
3378 5085 6.971756 CCTACGCATATAGACTCATCATCTTG 59.028 42.308 0.00 0.00 0.00 3.02
3379 5086 5.167121 ACGCATATAGACTCATCATCTTGC 58.833 41.667 0.00 0.00 0.00 4.01
3380 5087 5.166398 CGCATATAGACTCATCATCTTGCA 58.834 41.667 0.00 0.00 0.00 4.08
3381 5088 5.636543 CGCATATAGACTCATCATCTTGCAA 59.363 40.000 0.00 0.00 0.00 4.08
3382 5089 6.313164 CGCATATAGACTCATCATCTTGCAAT 59.687 38.462 0.00 0.00 0.00 3.56
3383 5090 7.465173 GCATATAGACTCATCATCTTGCAATG 58.535 38.462 0.00 0.00 0.00 2.82
3384 5091 7.414208 GCATATAGACTCATCATCTTGCAATGG 60.414 40.741 0.00 0.00 0.00 3.16
3385 5092 3.552875 AGACTCATCATCTTGCAATGGG 58.447 45.455 0.00 0.00 0.00 4.00
3386 5093 3.053842 AGACTCATCATCTTGCAATGGGT 60.054 43.478 0.00 0.00 36.82 4.51
3387 5094 3.021695 ACTCATCATCTTGCAATGGGTG 58.978 45.455 0.00 0.00 32.94 4.61
3388 5095 2.361119 CTCATCATCTTGCAATGGGTGG 59.639 50.000 0.00 0.00 0.00 4.61
3389 5096 2.025131 TCATCATCTTGCAATGGGTGGA 60.025 45.455 0.00 0.00 0.00 4.02
3390 5097 2.133281 TCATCTTGCAATGGGTGGAG 57.867 50.000 0.00 0.00 0.00 3.86
3391 5098 1.108776 CATCTTGCAATGGGTGGAGG 58.891 55.000 0.00 0.00 0.00 4.30
3392 5099 1.002069 ATCTTGCAATGGGTGGAGGA 58.998 50.000 0.00 0.00 38.06 3.71
3393 5100 0.776810 TCTTGCAATGGGTGGAGGAA 59.223 50.000 0.00 0.00 30.39 3.36
3394 5101 1.146774 TCTTGCAATGGGTGGAGGAAA 59.853 47.619 0.00 0.00 30.39 3.13
3395 5102 1.547372 CTTGCAATGGGTGGAGGAAAG 59.453 52.381 0.00 0.00 0.00 2.62
3396 5103 0.776810 TGCAATGGGTGGAGGAAAGA 59.223 50.000 0.00 0.00 0.00 2.52
3397 5104 1.358787 TGCAATGGGTGGAGGAAAGAT 59.641 47.619 0.00 0.00 0.00 2.40
3398 5105 2.225343 TGCAATGGGTGGAGGAAAGATT 60.225 45.455 0.00 0.00 0.00 2.40
3399 5106 2.833943 GCAATGGGTGGAGGAAAGATTT 59.166 45.455 0.00 0.00 0.00 2.17
3400 5107 4.023291 GCAATGGGTGGAGGAAAGATTTA 58.977 43.478 0.00 0.00 0.00 1.40
3401 5108 4.098501 GCAATGGGTGGAGGAAAGATTTAG 59.901 45.833 0.00 0.00 0.00 1.85
3402 5109 5.509498 CAATGGGTGGAGGAAAGATTTAGA 58.491 41.667 0.00 0.00 0.00 2.10
3403 5110 6.131961 CAATGGGTGGAGGAAAGATTTAGAT 58.868 40.000 0.00 0.00 0.00 1.98
3404 5111 7.290061 CAATGGGTGGAGGAAAGATTTAGATA 58.710 38.462 0.00 0.00 0.00 1.98
3405 5112 7.654287 ATGGGTGGAGGAAAGATTTAGATAT 57.346 36.000 0.00 0.00 0.00 1.63
3406 5113 6.841601 TGGGTGGAGGAAAGATTTAGATATG 58.158 40.000 0.00 0.00 0.00 1.78
3407 5114 6.619437 TGGGTGGAGGAAAGATTTAGATATGA 59.381 38.462 0.00 0.00 0.00 2.15
3408 5115 7.164803 GGGTGGAGGAAAGATTTAGATATGAG 58.835 42.308 0.00 0.00 0.00 2.90
3409 5116 7.016661 GGGTGGAGGAAAGATTTAGATATGAGA 59.983 40.741 0.00 0.00 0.00 3.27
3410 5117 8.432805 GGTGGAGGAAAGATTTAGATATGAGAA 58.567 37.037 0.00 0.00 0.00 2.87
3411 5118 9.267084 GTGGAGGAAAGATTTAGATATGAGAAC 57.733 37.037 0.00 0.00 0.00 3.01
3412 5119 8.992349 TGGAGGAAAGATTTAGATATGAGAACA 58.008 33.333 0.00 0.00 0.00 3.18
3413 5120 9.838339 GGAGGAAAGATTTAGATATGAGAACAA 57.162 33.333 0.00 0.00 0.00 2.83
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 8.717821 CAATCTATAAGTTCAAAGTTGGACGAA 58.282 33.333 0.00 0.00 41.64 3.85
5 6 9.739276 ATGTCAATCTATAAGTTCAAAGTTGGA 57.261 29.630 0.00 0.00 0.00 3.53
16 17 9.830186 AGGGAGTACATATGTCAATCTATAAGT 57.170 33.333 12.68 0.00 0.00 2.24
22 23 9.469097 GTATAGAGGGAGTACATATGTCAATCT 57.531 37.037 12.68 10.56 0.00 2.40
23 24 9.469097 AGTATAGAGGGAGTACATATGTCAATC 57.531 37.037 12.68 8.78 0.00 2.67
24 25 9.249053 CAGTATAGAGGGAGTACATATGTCAAT 57.751 37.037 12.68 0.00 0.00 2.57
25 26 7.670140 CCAGTATAGAGGGAGTACATATGTCAA 59.330 40.741 12.68 0.00 0.00 3.18
26 27 7.018249 TCCAGTATAGAGGGAGTACATATGTCA 59.982 40.741 12.68 0.00 0.00 3.58
27 28 7.403671 TCCAGTATAGAGGGAGTACATATGTC 58.596 42.308 12.68 4.47 0.00 3.06
28 29 7.344599 TCCAGTATAGAGGGAGTACATATGT 57.655 40.000 13.93 13.93 0.00 2.29
29 30 8.830915 ATTCCAGTATAGAGGGAGTACATATG 57.169 38.462 0.00 0.00 31.19 1.78
32 33 9.845214 AAATATTCCAGTATAGAGGGAGTACAT 57.155 33.333 0.00 0.00 31.19 2.29
33 34 9.090103 CAAATATTCCAGTATAGAGGGAGTACA 57.910 37.037 0.00 0.00 31.19 2.90
34 35 9.091220 ACAAATATTCCAGTATAGAGGGAGTAC 57.909 37.037 0.00 0.00 31.19 2.73
35 36 9.310449 GACAAATATTCCAGTATAGAGGGAGTA 57.690 37.037 0.00 0.00 31.19 2.59
36 37 7.039644 CGACAAATATTCCAGTATAGAGGGAGT 60.040 40.741 0.00 0.00 31.19 3.85
37 38 7.316640 CGACAAATATTCCAGTATAGAGGGAG 58.683 42.308 0.00 0.00 31.19 4.30
38 39 6.295123 GCGACAAATATTCCAGTATAGAGGGA 60.295 42.308 0.00 0.00 0.00 4.20
39 40 5.869888 GCGACAAATATTCCAGTATAGAGGG 59.130 44.000 0.00 0.00 0.00 4.30
40 41 6.587990 CAGCGACAAATATTCCAGTATAGAGG 59.412 42.308 0.00 0.00 0.00 3.69
41 42 6.587990 CCAGCGACAAATATTCCAGTATAGAG 59.412 42.308 0.00 0.00 0.00 2.43
42 43 6.455647 CCAGCGACAAATATTCCAGTATAGA 58.544 40.000 0.00 0.00 0.00 1.98
43 44 5.639506 CCCAGCGACAAATATTCCAGTATAG 59.360 44.000 0.00 0.00 0.00 1.31
44 45 5.305902 TCCCAGCGACAAATATTCCAGTATA 59.694 40.000 0.00 0.00 0.00 1.47
45 46 4.102524 TCCCAGCGACAAATATTCCAGTAT 59.897 41.667 0.00 0.00 0.00 2.12
46 47 3.452990 TCCCAGCGACAAATATTCCAGTA 59.547 43.478 0.00 0.00 0.00 2.74
47 48 2.238646 TCCCAGCGACAAATATTCCAGT 59.761 45.455 0.00 0.00 0.00 4.00
48 49 2.917933 TCCCAGCGACAAATATTCCAG 58.082 47.619 0.00 0.00 0.00 3.86
49 50 3.358111 TTCCCAGCGACAAATATTCCA 57.642 42.857 0.00 0.00 0.00 3.53
50 51 4.421058 GTTTTCCCAGCGACAAATATTCC 58.579 43.478 0.00 0.00 0.00 3.01
51 52 4.421058 GGTTTTCCCAGCGACAAATATTC 58.579 43.478 0.00 0.00 0.00 1.75
52 53 4.450082 GGTTTTCCCAGCGACAAATATT 57.550 40.909 0.00 0.00 0.00 1.28
66 67 3.255888 GGAGATGTTGAACTGGGTTTTCC 59.744 47.826 0.00 0.00 39.75 3.13
67 68 3.255888 GGGAGATGTTGAACTGGGTTTTC 59.744 47.826 0.00 0.00 0.00 2.29
68 69 3.230976 GGGAGATGTTGAACTGGGTTTT 58.769 45.455 0.00 0.00 0.00 2.43
69 70 2.176798 TGGGAGATGTTGAACTGGGTTT 59.823 45.455 0.00 0.00 0.00 3.27
70 71 1.780309 TGGGAGATGTTGAACTGGGTT 59.220 47.619 0.00 0.00 0.00 4.11
71 72 1.352352 CTGGGAGATGTTGAACTGGGT 59.648 52.381 0.00 0.00 0.00 4.51
72 73 1.952367 GCTGGGAGATGTTGAACTGGG 60.952 57.143 0.00 0.00 0.00 4.45
73 74 1.457346 GCTGGGAGATGTTGAACTGG 58.543 55.000 0.00 0.00 0.00 4.00
74 75 1.081892 CGCTGGGAGATGTTGAACTG 58.918 55.000 0.00 0.00 0.00 3.16
75 76 0.976641 TCGCTGGGAGATGTTGAACT 59.023 50.000 0.00 0.00 0.00 3.01
76 77 1.667724 CATCGCTGGGAGATGTTGAAC 59.332 52.381 0.00 0.00 40.27 3.18
77 78 2.028420 CATCGCTGGGAGATGTTGAA 57.972 50.000 0.00 0.00 40.27 2.69
78 79 3.766644 CATCGCTGGGAGATGTTGA 57.233 52.632 0.00 0.00 40.27 3.18
83 84 2.107378 TCTAGAGACATCGCTGGGAGAT 59.893 50.000 0.00 0.00 0.00 2.75
84 85 1.490910 TCTAGAGACATCGCTGGGAGA 59.509 52.381 0.00 0.00 0.00 3.71
85 86 1.606668 GTCTAGAGACATCGCTGGGAG 59.393 57.143 4.77 0.00 44.18 4.30
86 87 1.681538 GTCTAGAGACATCGCTGGGA 58.318 55.000 4.77 0.00 44.18 4.37
107 108 9.675464 TCCGTCCTAAAATTATTGTCTTACATT 57.325 29.630 0.00 0.00 0.00 2.71
108 109 9.326413 CTCCGTCCTAAAATTATTGTCTTACAT 57.674 33.333 0.00 0.00 0.00 2.29
109 110 7.767198 CCTCCGTCCTAAAATTATTGTCTTACA 59.233 37.037 0.00 0.00 0.00 2.41
110 111 7.226128 CCCTCCGTCCTAAAATTATTGTCTTAC 59.774 40.741 0.00 0.00 0.00 2.34
111 112 7.126115 TCCCTCCGTCCTAAAATTATTGTCTTA 59.874 37.037 0.00 0.00 0.00 2.10
112 113 6.069847 TCCCTCCGTCCTAAAATTATTGTCTT 60.070 38.462 0.00 0.00 0.00 3.01
113 114 5.427481 TCCCTCCGTCCTAAAATTATTGTCT 59.573 40.000 0.00 0.00 0.00 3.41
114 115 5.677567 TCCCTCCGTCCTAAAATTATTGTC 58.322 41.667 0.00 0.00 0.00 3.18
115 116 5.191124 ACTCCCTCCGTCCTAAAATTATTGT 59.809 40.000 0.00 0.00 0.00 2.71
116 117 5.681639 ACTCCCTCCGTCCTAAAATTATTG 58.318 41.667 0.00 0.00 0.00 1.90
117 118 5.970501 ACTCCCTCCGTCCTAAAATTATT 57.029 39.130 0.00 0.00 0.00 1.40
118 119 7.628501 AATACTCCCTCCGTCCTAAAATTAT 57.371 36.000 0.00 0.00 0.00 1.28
119 120 7.441903 AAATACTCCCTCCGTCCTAAAATTA 57.558 36.000 0.00 0.00 0.00 1.40
120 121 5.970501 AATACTCCCTCCGTCCTAAAATT 57.029 39.130 0.00 0.00 0.00 1.82
121 122 5.970501 AAATACTCCCTCCGTCCTAAAAT 57.029 39.130 0.00 0.00 0.00 1.82
122 123 5.364735 CCTAAATACTCCCTCCGTCCTAAAA 59.635 44.000 0.00 0.00 0.00 1.52
123 124 4.897670 CCTAAATACTCCCTCCGTCCTAAA 59.102 45.833 0.00 0.00 0.00 1.85
124 125 4.168675 TCCTAAATACTCCCTCCGTCCTAA 59.831 45.833 0.00 0.00 0.00 2.69
125 126 3.723681 TCCTAAATACTCCCTCCGTCCTA 59.276 47.826 0.00 0.00 0.00 2.94
126 127 2.517127 TCCTAAATACTCCCTCCGTCCT 59.483 50.000 0.00 0.00 0.00 3.85
127 128 2.954792 TCCTAAATACTCCCTCCGTCC 58.045 52.381 0.00 0.00 0.00 4.79
128 129 3.703052 TGTTCCTAAATACTCCCTCCGTC 59.297 47.826 0.00 0.00 0.00 4.79
129 130 3.705072 CTGTTCCTAAATACTCCCTCCGT 59.295 47.826 0.00 0.00 0.00 4.69
130 131 3.069729 CCTGTTCCTAAATACTCCCTCCG 59.930 52.174 0.00 0.00 0.00 4.63
131 132 3.391626 CCCTGTTCCTAAATACTCCCTCC 59.608 52.174 0.00 0.00 0.00 4.30
132 133 3.391626 CCCCTGTTCCTAAATACTCCCTC 59.608 52.174 0.00 0.00 0.00 4.30
133 134 3.014807 TCCCCTGTTCCTAAATACTCCCT 59.985 47.826 0.00 0.00 0.00 4.20
134 135 3.390819 TCCCCTGTTCCTAAATACTCCC 58.609 50.000 0.00 0.00 0.00 4.30
135 136 4.473922 ACTTCCCCTGTTCCTAAATACTCC 59.526 45.833 0.00 0.00 0.00 3.85
136 137 5.695424 ACTTCCCCTGTTCCTAAATACTC 57.305 43.478 0.00 0.00 0.00 2.59
137 138 7.766736 AATACTTCCCCTGTTCCTAAATACT 57.233 36.000 0.00 0.00 0.00 2.12
141 142 9.250246 CAAATAAATACTTCCCCTGTTCCTAAA 57.750 33.333 0.00 0.00 0.00 1.85
142 143 8.395605 ACAAATAAATACTTCCCCTGTTCCTAA 58.604 33.333 0.00 0.00 0.00 2.69
143 144 7.935405 ACAAATAAATACTTCCCCTGTTCCTA 58.065 34.615 0.00 0.00 0.00 2.94
144 145 6.800890 ACAAATAAATACTTCCCCTGTTCCT 58.199 36.000 0.00 0.00 0.00 3.36
145 146 8.584063 TTACAAATAAATACTTCCCCTGTTCC 57.416 34.615 0.00 0.00 0.00 3.62
146 147 9.850628 GTTTACAAATAAATACTTCCCCTGTTC 57.149 33.333 0.00 0.00 32.91 3.18
147 148 9.596308 AGTTTACAAATAAATACTTCCCCTGTT 57.404 29.630 0.00 0.00 32.91 3.16
160 161 9.953565 ACTAGCCATCAGTAGTTTACAAATAAA 57.046 29.630 0.00 0.00 0.00 1.40
161 162 9.378551 CACTAGCCATCAGTAGTTTACAAATAA 57.621 33.333 0.00 0.00 0.00 1.40
162 163 8.537016 ACACTAGCCATCAGTAGTTTACAAATA 58.463 33.333 0.00 0.00 0.00 1.40
163 164 7.394816 ACACTAGCCATCAGTAGTTTACAAAT 58.605 34.615 0.00 0.00 0.00 2.32
164 165 6.765403 ACACTAGCCATCAGTAGTTTACAAA 58.235 36.000 0.00 0.00 0.00 2.83
165 166 6.354794 ACACTAGCCATCAGTAGTTTACAA 57.645 37.500 0.00 0.00 0.00 2.41
166 167 5.995565 ACACTAGCCATCAGTAGTTTACA 57.004 39.130 0.00 0.00 0.00 2.41
167 168 8.943909 AAATACACTAGCCATCAGTAGTTTAC 57.056 34.615 0.00 0.00 0.00 2.01
169 170 8.204836 CCTAAATACACTAGCCATCAGTAGTTT 58.795 37.037 0.00 0.00 0.00 2.66
170 171 7.687103 GCCTAAATACACTAGCCATCAGTAGTT 60.687 40.741 0.00 0.00 0.00 2.24
171 172 6.239345 GCCTAAATACACTAGCCATCAGTAGT 60.239 42.308 0.00 0.00 0.00 2.73
172 173 6.159988 GCCTAAATACACTAGCCATCAGTAG 58.840 44.000 0.00 0.00 0.00 2.57
173 174 5.011738 GGCCTAAATACACTAGCCATCAGTA 59.988 44.000 0.00 0.00 0.00 2.74
174 175 4.202367 GGCCTAAATACACTAGCCATCAGT 60.202 45.833 0.00 0.00 0.00 3.41
175 176 4.202357 TGGCCTAAATACACTAGCCATCAG 60.202 45.833 3.32 0.00 0.00 2.90
176 177 3.714280 TGGCCTAAATACACTAGCCATCA 59.286 43.478 3.32 0.00 0.00 3.07
177 178 4.351874 TGGCCTAAATACACTAGCCATC 57.648 45.455 3.32 0.00 0.00 3.51
178 179 4.104738 ACATGGCCTAAATACACTAGCCAT 59.895 41.667 3.32 8.47 35.48 4.40
179 180 3.458118 ACATGGCCTAAATACACTAGCCA 59.542 43.478 3.32 3.72 31.55 4.75
180 181 4.086706 ACATGGCCTAAATACACTAGCC 57.913 45.455 3.32 0.00 0.00 3.93
181 182 5.221048 CCAAACATGGCCTAAATACACTAGC 60.221 44.000 3.32 0.00 0.00 3.42
182 183 5.885912 ACCAAACATGGCCTAAATACACTAG 59.114 40.000 3.32 0.00 0.00 2.57
183 184 5.822204 ACCAAACATGGCCTAAATACACTA 58.178 37.500 3.32 0.00 0.00 2.74
184 185 4.672899 ACCAAACATGGCCTAAATACACT 58.327 39.130 3.32 0.00 0.00 3.55
185 186 5.047660 TGAACCAAACATGGCCTAAATACAC 60.048 40.000 3.32 0.00 0.00 2.90
186 187 5.080337 TGAACCAAACATGGCCTAAATACA 58.920 37.500 3.32 0.00 0.00 2.29
187 188 5.652994 TGAACCAAACATGGCCTAAATAC 57.347 39.130 3.32 0.00 0.00 1.89
188 189 7.617723 ACTTATGAACCAAACATGGCCTAAATA 59.382 33.333 3.32 0.00 0.00 1.40
189 190 6.440328 ACTTATGAACCAAACATGGCCTAAAT 59.560 34.615 3.32 0.00 0.00 1.40
190 191 5.777732 ACTTATGAACCAAACATGGCCTAAA 59.222 36.000 3.32 0.00 0.00 1.85
191 192 5.329399 ACTTATGAACCAAACATGGCCTAA 58.671 37.500 3.32 0.00 0.00 2.69
192 193 4.929479 ACTTATGAACCAAACATGGCCTA 58.071 39.130 3.32 0.00 0.00 3.93
193 194 3.778265 ACTTATGAACCAAACATGGCCT 58.222 40.909 3.32 0.00 0.00 5.19
194 195 4.220602 AGAACTTATGAACCAAACATGGCC 59.779 41.667 0.00 0.00 0.00 5.36
195 196 5.391312 AGAACTTATGAACCAAACATGGC 57.609 39.130 0.00 0.00 0.00 4.40
196 197 6.884295 TCCTAGAACTTATGAACCAAACATGG 59.116 38.462 0.00 0.00 0.00 3.66
197 198 7.607991 AGTCCTAGAACTTATGAACCAAACATG 59.392 37.037 0.00 0.00 0.00 3.21
198 199 7.690256 AGTCCTAGAACTTATGAACCAAACAT 58.310 34.615 0.00 0.00 0.00 2.71
199 200 7.074653 AGTCCTAGAACTTATGAACCAAACA 57.925 36.000 0.00 0.00 0.00 2.83
200 201 7.981102 AAGTCCTAGAACTTATGAACCAAAC 57.019 36.000 0.00 0.00 37.71 2.93
201 202 8.990163 AAAAGTCCTAGAACTTATGAACCAAA 57.010 30.769 0.00 0.00 38.52 3.28
202 203 8.990163 AAAAAGTCCTAGAACTTATGAACCAA 57.010 30.769 0.00 0.00 38.52 3.67
229 230 9.406113 GGACTTGAGACTTATAAGTTAGGTCTA 57.594 37.037 18.96 9.76 39.88 2.59
230 231 7.342541 GGGACTTGAGACTTATAAGTTAGGTCT 59.657 40.741 18.96 11.20 39.88 3.85
231 232 7.342541 AGGGACTTGAGACTTATAAGTTAGGTC 59.657 40.741 18.96 19.83 34.84 3.85
232 233 7.190501 AGGGACTTGAGACTTATAAGTTAGGT 58.809 38.462 18.96 14.08 34.84 3.08
233 234 7.663043 AGGGACTTGAGACTTATAAGTTAGG 57.337 40.000 18.96 11.42 34.84 2.69
237 238 9.945904 CTTTTTAGGGACTTGAGACTTATAAGT 57.054 33.333 18.05 18.05 40.66 2.24
238 239 9.945904 ACTTTTTAGGGACTTGAGACTTATAAG 57.054 33.333 11.05 11.05 41.75 1.73
239 240 9.939802 GACTTTTTAGGGACTTGAGACTTATAA 57.060 33.333 0.00 0.00 41.75 0.98
240 241 8.537858 GGACTTTTTAGGGACTTGAGACTTATA 58.462 37.037 0.00 0.00 41.75 0.98
241 242 7.395617 GGACTTTTTAGGGACTTGAGACTTAT 58.604 38.462 0.00 0.00 41.75 1.73
242 243 6.239800 GGGACTTTTTAGGGACTTGAGACTTA 60.240 42.308 0.00 0.00 41.75 2.24
243 244 5.456330 GGGACTTTTTAGGGACTTGAGACTT 60.456 44.000 0.00 0.00 41.75 3.01
244 245 4.041815 GGGACTTTTTAGGGACTTGAGACT 59.958 45.833 0.00 0.00 41.75 3.24
245 246 4.041815 AGGGACTTTTTAGGGACTTGAGAC 59.958 45.833 0.00 0.00 34.75 3.36
246 247 4.240323 AGGGACTTTTTAGGGACTTGAGA 58.760 43.478 0.00 0.00 34.75 3.27
247 248 4.642466 AGGGACTTTTTAGGGACTTGAG 57.358 45.455 0.00 0.00 34.75 3.02
248 249 4.287845 GGTAGGGACTTTTTAGGGACTTGA 59.712 45.833 0.00 0.00 39.49 3.02
249 250 4.288887 AGGTAGGGACTTTTTAGGGACTTG 59.711 45.833 0.00 0.00 39.49 3.16
250 251 4.288887 CAGGTAGGGACTTTTTAGGGACTT 59.711 45.833 0.00 0.00 39.49 3.01
251 252 3.844804 CAGGTAGGGACTTTTTAGGGACT 59.155 47.826 0.00 0.00 41.75 3.85
252 253 3.586174 ACAGGTAGGGACTTTTTAGGGAC 59.414 47.826 0.00 0.00 41.75 4.46
253 254 3.878086 ACAGGTAGGGACTTTTTAGGGA 58.122 45.455 0.00 0.00 41.75 4.20
254 255 4.652679 AACAGGTAGGGACTTTTTAGGG 57.347 45.455 0.00 0.00 41.75 3.53
255 256 5.831525 ACAAAACAGGTAGGGACTTTTTAGG 59.168 40.000 0.00 0.00 41.75 2.69
256 257 6.954487 ACAAAACAGGTAGGGACTTTTTAG 57.046 37.500 0.00 0.00 41.75 1.85
257 258 6.321945 GGAACAAAACAGGTAGGGACTTTTTA 59.678 38.462 0.00 0.00 41.75 1.52
258 259 5.128171 GGAACAAAACAGGTAGGGACTTTTT 59.872 40.000 0.00 0.00 41.75 1.94
259 260 4.647853 GGAACAAAACAGGTAGGGACTTTT 59.352 41.667 0.00 0.00 41.75 2.27
260 261 4.079385 AGGAACAAAACAGGTAGGGACTTT 60.079 41.667 0.00 0.00 41.75 2.66
261 262 3.462205 AGGAACAAAACAGGTAGGGACTT 59.538 43.478 0.00 0.00 41.75 3.01
262 263 3.053826 AGGAACAAAACAGGTAGGGACT 58.946 45.455 0.00 0.00 46.37 3.85
263 264 3.146847 CAGGAACAAAACAGGTAGGGAC 58.853 50.000 0.00 0.00 0.00 4.46
264 265 2.107552 CCAGGAACAAAACAGGTAGGGA 59.892 50.000 0.00 0.00 0.00 4.20
265 266 2.514803 CCAGGAACAAAACAGGTAGGG 58.485 52.381 0.00 0.00 0.00 3.53
266 267 2.107552 TCCCAGGAACAAAACAGGTAGG 59.892 50.000 0.00 0.00 0.00 3.18
267 268 3.146847 GTCCCAGGAACAAAACAGGTAG 58.853 50.000 0.00 0.00 0.00 3.18
268 269 2.781174 AGTCCCAGGAACAAAACAGGTA 59.219 45.455 0.00 0.00 0.00 3.08
269 270 1.569072 AGTCCCAGGAACAAAACAGGT 59.431 47.619 0.00 0.00 0.00 4.00
270 271 2.364972 AGTCCCAGGAACAAAACAGG 57.635 50.000 0.00 0.00 0.00 4.00
271 272 6.715264 ACTTATAAGTCCCAGGAACAAAACAG 59.285 38.462 12.50 0.00 32.86 3.16
272 273 6.607019 ACTTATAAGTCCCAGGAACAAAACA 58.393 36.000 12.50 0.00 32.86 2.83
293 294 9.448587 AGTTGTAATATGGTCTTATAGGGACTT 57.551 33.333 7.52 0.00 41.75 3.01
314 315 9.145442 GAGGGACTTATAAGGACTTATAGTTGT 57.855 37.037 16.73 10.82 41.55 3.32
315 316 8.586744 GGAGGGACTTATAAGGACTTATAGTTG 58.413 40.741 16.73 8.56 41.55 3.16
316 317 8.521301 AGGAGGGACTTATAAGGACTTATAGTT 58.479 37.037 16.73 3.99 41.55 2.24
317 318 8.071235 AGGAGGGACTTATAAGGACTTATAGT 57.929 38.462 16.73 10.79 41.55 2.12
318 319 8.808092 CAAGGAGGGACTTATAAGGACTTATAG 58.192 40.741 16.73 8.50 41.55 1.31
319 320 8.517047 TCAAGGAGGGACTTATAAGGACTTATA 58.483 37.037 16.73 7.52 41.55 0.98
320 321 7.371043 TCAAGGAGGGACTTATAAGGACTTAT 58.629 38.462 16.73 9.33 41.55 1.73
321 322 6.748969 TCAAGGAGGGACTTATAAGGACTTA 58.251 40.000 16.73 0.00 41.55 2.24
322 323 5.600749 TCAAGGAGGGACTTATAAGGACTT 58.399 41.667 16.73 5.36 41.55 3.01
323 324 5.043281 TCTCAAGGAGGGACTTATAAGGACT 60.043 44.000 16.73 10.75 41.55 3.85
324 325 5.209659 TCTCAAGGAGGGACTTATAAGGAC 58.790 45.833 16.73 9.80 41.55 3.85
325 326 5.043281 ACTCTCAAGGAGGGACTTATAAGGA 60.043 44.000 16.73 0.57 45.83 3.36
326 327 5.212745 ACTCTCAAGGAGGGACTTATAAGG 58.787 45.833 16.73 0.00 45.83 2.69
327 328 6.133356 AGACTCTCAAGGAGGGACTTATAAG 58.867 44.000 11.05 11.05 45.83 1.73
328 329 6.093617 AGACTCTCAAGGAGGGACTTATAA 57.906 41.667 0.00 0.00 45.83 0.98
329 330 5.735733 AGACTCTCAAGGAGGGACTTATA 57.264 43.478 0.00 0.00 45.83 0.98
330 331 4.618378 AGACTCTCAAGGAGGGACTTAT 57.382 45.455 0.00 0.00 45.83 1.73
331 332 4.405756 AAGACTCTCAAGGAGGGACTTA 57.594 45.455 8.68 0.00 41.64 2.24
332 333 3.268034 AAGACTCTCAAGGAGGGACTT 57.732 47.619 5.25 5.25 45.83 3.01
333 334 4.618378 ATAAGACTCTCAAGGAGGGACT 57.382 45.455 0.00 0.00 45.83 3.85
334 335 5.685520 AAATAAGACTCTCAAGGAGGGAC 57.314 43.478 0.00 0.00 45.83 4.46
335 336 7.996758 ATAAAATAAGACTCTCAAGGAGGGA 57.003 36.000 0.00 0.00 45.83 4.20
336 337 9.771534 CTTATAAAATAAGACTCTCAAGGAGGG 57.228 37.037 1.20 0.00 45.83 4.30
340 341 9.549078 GGGACTTATAAAATAAGACTCTCAAGG 57.451 37.037 12.43 0.00 0.00 3.61
357 358 9.802039 ACTTAAAGTGTTCATTTGGGACTTATA 57.198 29.630 0.00 0.00 0.00 0.98
358 359 8.706322 ACTTAAAGTGTTCATTTGGGACTTAT 57.294 30.769 0.00 0.00 0.00 1.73
359 360 7.996644 AGACTTAAAGTGTTCATTTGGGACTTA 59.003 33.333 0.00 0.00 0.00 2.24
360 361 6.833933 AGACTTAAAGTGTTCATTTGGGACTT 59.166 34.615 0.00 0.00 0.00 3.01
361 362 6.365520 AGACTTAAAGTGTTCATTTGGGACT 58.634 36.000 0.00 0.00 0.00 3.85
362 363 6.635030 AGACTTAAAGTGTTCATTTGGGAC 57.365 37.500 0.00 0.00 0.00 4.46
363 364 7.654022 AAAGACTTAAAGTGTTCATTTGGGA 57.346 32.000 0.00 0.00 29.69 4.37
370 371 9.498176 GGGACTTATAAAGACTTAAAGTGTTCA 57.502 33.333 12.66 0.00 29.69 3.18
371 372 9.722184 AGGGACTTATAAAGACTTAAAGTGTTC 57.278 33.333 12.66 0.00 26.89 3.18
372 373 9.722184 GAGGGACTTATAAAGACTTAAAGTGTT 57.278 33.333 12.66 0.00 41.55 3.32
373 374 8.319881 GGAGGGACTTATAAAGACTTAAAGTGT 58.680 37.037 12.66 0.66 41.55 3.55
374 375 8.541234 AGGAGGGACTTATAAAGACTTAAAGTG 58.459 37.037 12.66 0.00 41.55 3.16
375 376 8.541234 CAGGAGGGACTTATAAAGACTTAAAGT 58.459 37.037 9.19 9.19 41.55 2.66
376 377 8.541234 ACAGGAGGGACTTATAAAGACTTAAAG 58.459 37.037 0.00 0.00 41.55 1.85
377 378 8.445361 ACAGGAGGGACTTATAAAGACTTAAA 57.555 34.615 0.00 0.00 41.55 1.52
378 379 8.445361 AACAGGAGGGACTTATAAAGACTTAA 57.555 34.615 0.00 0.00 41.55 1.85
379 380 8.319146 CAAACAGGAGGGACTTATAAAGACTTA 58.681 37.037 0.00 0.00 41.55 2.24
380 381 6.954352 AACAGGAGGGACTTATAAAGACTT 57.046 37.500 0.00 0.00 41.55 3.01
381 382 6.296489 CCAAACAGGAGGGACTTATAAAGACT 60.296 42.308 0.00 0.00 41.55 3.24
382 383 5.880887 CCAAACAGGAGGGACTTATAAAGAC 59.119 44.000 0.00 0.00 41.55 3.01
383 384 5.550403 ACCAAACAGGAGGGACTTATAAAGA 59.450 40.000 0.00 0.00 41.55 2.52
384 385 5.816682 ACCAAACAGGAGGGACTTATAAAG 58.183 41.667 0.00 0.00 41.55 1.85
385 386 5.853572 ACCAAACAGGAGGGACTTATAAA 57.146 39.130 0.00 0.00 41.55 1.40
386 387 5.853572 AACCAAACAGGAGGGACTTATAA 57.146 39.130 0.00 0.00 41.55 0.98
387 388 5.853572 AAACCAAACAGGAGGGACTTATA 57.146 39.130 0.00 0.00 41.55 0.98
388 389 4.741928 AAACCAAACAGGAGGGACTTAT 57.258 40.909 0.00 0.00 41.55 1.73
389 390 4.909088 TCTAAACCAAACAGGAGGGACTTA 59.091 41.667 0.00 0.00 41.55 2.24
390 391 3.720002 TCTAAACCAAACAGGAGGGACTT 59.280 43.478 0.00 0.00 41.55 3.01
392 393 3.782656 TCTAAACCAAACAGGAGGGAC 57.217 47.619 0.00 0.00 41.22 4.46
393 394 3.913799 TCATCTAAACCAAACAGGAGGGA 59.086 43.478 0.00 0.00 41.22 4.20
394 395 4.019321 TCTCATCTAAACCAAACAGGAGGG 60.019 45.833 0.00 0.00 41.22 4.30
395 396 4.938226 GTCTCATCTAAACCAAACAGGAGG 59.062 45.833 0.00 0.00 41.22 4.30
396 397 5.799213 AGTCTCATCTAAACCAAACAGGAG 58.201 41.667 0.00 0.00 41.22 3.69
397 398 5.825593 AGTCTCATCTAAACCAAACAGGA 57.174 39.130 0.00 0.00 41.22 3.86
398 399 9.319143 CTATAAGTCTCATCTAAACCAAACAGG 57.681 37.037 0.00 0.00 45.67 4.00
399 400 9.319143 CCTATAAGTCTCATCTAAACCAAACAG 57.681 37.037 0.00 0.00 0.00 3.16
400 401 8.265055 CCCTATAAGTCTCATCTAAACCAAACA 58.735 37.037 0.00 0.00 0.00 2.83
401 402 8.483758 TCCCTATAAGTCTCATCTAAACCAAAC 58.516 37.037 0.00 0.00 0.00 2.93
402 403 8.483758 GTCCCTATAAGTCTCATCTAAACCAAA 58.516 37.037 0.00 0.00 0.00 3.28
403 404 7.844779 AGTCCCTATAAGTCTCATCTAAACCAA 59.155 37.037 0.00 0.00 0.00 3.67
404 405 7.363031 AGTCCCTATAAGTCTCATCTAAACCA 58.637 38.462 0.00 0.00 0.00 3.67
405 406 7.842887 AGTCCCTATAAGTCTCATCTAAACC 57.157 40.000 0.00 0.00 0.00 3.27
430 431 9.081204 GGACTTATTGGTTTAGGGACTTAAAAA 57.919 33.333 0.00 0.00 41.75 1.94
431 432 7.670979 GGGACTTATTGGTTTAGGGACTTAAAA 59.329 37.037 0.00 0.00 41.75 1.52
432 433 7.018851 AGGGACTTATTGGTTTAGGGACTTAAA 59.981 37.037 0.00 0.00 34.75 1.52
433 434 6.506413 AGGGACTTATTGGTTTAGGGACTTAA 59.494 38.462 0.00 0.00 34.75 1.85
434 435 6.034003 AGGGACTTATTGGTTTAGGGACTTA 58.966 40.000 0.00 0.00 34.75 2.24
435 436 4.856182 AGGGACTTATTGGTTTAGGGACTT 59.144 41.667 0.00 0.00 34.75 3.01
436 437 4.445564 AGGGACTTATTGGTTTAGGGACT 58.554 43.478 0.00 0.00 38.08 3.85
437 438 4.857130 AGGGACTTATTGGTTTAGGGAC 57.143 45.455 0.00 0.00 27.25 4.46
438 439 6.973700 TTTAGGGACTTATTGGTTTAGGGA 57.026 37.500 0.00 0.00 41.75 4.20
439 440 7.452189 TGTTTTTAGGGACTTATTGGTTTAGGG 59.548 37.037 0.00 0.00 41.75 3.53
440 441 8.411991 TGTTTTTAGGGACTTATTGGTTTAGG 57.588 34.615 0.00 0.00 41.75 2.69
443 444 8.541234 TGTTTGTTTTTAGGGACTTATTGGTTT 58.459 29.630 0.00 0.00 41.75 3.27
444 445 7.982919 GTGTTTGTTTTTAGGGACTTATTGGTT 59.017 33.333 0.00 0.00 41.75 3.67
445 446 7.418139 GGTGTTTGTTTTTAGGGACTTATTGGT 60.418 37.037 0.00 0.00 41.75 3.67
446 447 6.926826 GGTGTTTGTTTTTAGGGACTTATTGG 59.073 38.462 0.00 0.00 41.75 3.16
447 448 6.926826 GGGTGTTTGTTTTTAGGGACTTATTG 59.073 38.462 0.00 0.00 41.75 1.90
448 449 6.842280 AGGGTGTTTGTTTTTAGGGACTTATT 59.158 34.615 0.00 0.00 41.75 1.40
449 450 6.378745 AGGGTGTTTGTTTTTAGGGACTTAT 58.621 36.000 0.00 0.00 41.75 1.73
450 451 5.768752 AGGGTGTTTGTTTTTAGGGACTTA 58.231 37.500 0.00 0.00 41.75 2.24
451 452 4.616553 AGGGTGTTTGTTTTTAGGGACTT 58.383 39.130 0.00 0.00 41.75 3.01
452 453 4.079385 AGAGGGTGTTTGTTTTTAGGGACT 60.079 41.667 0.00 0.00 46.37 3.85
453 454 4.212716 AGAGGGTGTTTGTTTTTAGGGAC 58.787 43.478 0.00 0.00 0.00 4.46
454 455 4.529716 AGAGGGTGTTTGTTTTTAGGGA 57.470 40.909 0.00 0.00 0.00 4.20
455 456 5.831525 ACTAAGAGGGTGTTTGTTTTTAGGG 59.168 40.000 0.00 0.00 0.00 3.53
456 457 6.544564 TCACTAAGAGGGTGTTTGTTTTTAGG 59.455 38.462 0.00 0.00 36.25 2.69
457 458 7.497909 TCTCACTAAGAGGGTGTTTGTTTTTAG 59.502 37.037 0.00 0.00 44.81 1.85
458 459 7.340256 TCTCACTAAGAGGGTGTTTGTTTTTA 58.660 34.615 0.00 0.00 44.81 1.52
459 460 6.184789 TCTCACTAAGAGGGTGTTTGTTTTT 58.815 36.000 0.00 0.00 44.81 1.94
460 461 5.751586 TCTCACTAAGAGGGTGTTTGTTTT 58.248 37.500 0.00 0.00 44.81 2.43
461 462 5.367945 TCTCACTAAGAGGGTGTTTGTTT 57.632 39.130 0.00 0.00 44.81 2.83
462 463 4.962155 CTCTCACTAAGAGGGTGTTTGTT 58.038 43.478 0.00 0.00 46.73 2.83
463 464 4.608948 CTCTCACTAAGAGGGTGTTTGT 57.391 45.455 0.00 0.00 46.73 2.83
478 479 4.319839 GCTTACTTTTTGGAGTGCTCTCAC 60.320 45.833 17.04 7.54 42.05 3.51
495 496 6.821665 TCTGTGTTAGTGTTCTTTTGCTTACT 59.178 34.615 0.00 0.00 0.00 2.24
498 499 5.648092 ACTCTGTGTTAGTGTTCTTTTGCTT 59.352 36.000 0.00 0.00 29.15 3.91
517 519 0.612229 ATGCTCCTCACACCACTCTG 59.388 55.000 0.00 0.00 0.00 3.35
538 540 6.431278 CACTCACACCTAACGAGTATGATAG 58.569 44.000 0.00 0.00 37.92 2.08
601 603 1.195448 GTGCGATATACAGGCATGCAC 59.805 52.381 21.36 9.10 43.47 4.57
605 607 2.365293 TGTGAGTGCGATATACAGGCAT 59.635 45.455 0.00 0.00 39.14 4.40
606 608 1.754226 TGTGAGTGCGATATACAGGCA 59.246 47.619 0.00 0.00 0.00 4.75
608 610 2.545952 GGGTGTGAGTGCGATATACAGG 60.546 54.545 0.00 0.00 0.00 4.00
609 611 2.100749 TGGGTGTGAGTGCGATATACAG 59.899 50.000 0.00 0.00 0.00 2.74
611 613 2.361119 TCTGGGTGTGAGTGCGATATAC 59.639 50.000 0.00 0.00 0.00 1.47
618 620 1.827969 ACTATCTCTGGGTGTGAGTGC 59.172 52.381 0.00 0.00 33.59 4.40
619 621 3.092301 TGACTATCTCTGGGTGTGAGTG 58.908 50.000 0.00 0.00 33.59 3.51
623 625 1.482593 GGGTGACTATCTCTGGGTGTG 59.517 57.143 0.00 0.00 0.00 3.82
624 626 1.078823 TGGGTGACTATCTCTGGGTGT 59.921 52.381 0.00 0.00 0.00 4.16
629 631 4.525874 TCATATGCTGGGTGACTATCTCTG 59.474 45.833 0.00 0.00 0.00 3.35
632 634 3.580458 GGTCATATGCTGGGTGACTATCT 59.420 47.826 0.00 0.00 41.43 1.98
633 635 3.324846 TGGTCATATGCTGGGTGACTATC 59.675 47.826 0.00 0.00 41.43 2.08
635 637 2.758130 TGGTCATATGCTGGGTGACTA 58.242 47.619 0.00 0.00 41.43 2.59
636 638 1.583556 TGGTCATATGCTGGGTGACT 58.416 50.000 0.00 0.00 41.43 3.41
637 639 2.645838 ATGGTCATATGCTGGGTGAC 57.354 50.000 0.00 0.00 41.07 3.67
638 640 2.509131 TGAATGGTCATATGCTGGGTGA 59.491 45.455 0.00 0.00 0.00 4.02
639 641 2.934887 TGAATGGTCATATGCTGGGTG 58.065 47.619 0.00 0.00 0.00 4.61
640 642 3.138839 TCATGAATGGTCATATGCTGGGT 59.861 43.478 0.00 0.00 42.88 4.51
641 643 3.758425 TCATGAATGGTCATATGCTGGG 58.242 45.455 0.00 0.00 42.88 4.45
642 644 5.475564 TGAATCATGAATGGTCATATGCTGG 59.524 40.000 0.00 0.00 42.88 4.85
643 645 6.569179 TGAATCATGAATGGTCATATGCTG 57.431 37.500 0.00 0.00 42.88 4.41
645 647 6.330278 CCATGAATCATGAATGGTCATATGC 58.670 40.000 23.55 0.00 42.88 3.14
662 664 5.243730 ACTTTTGATCGTTCCAACCATGAAT 59.756 36.000 0.00 0.00 0.00 2.57
664 666 4.141287 ACTTTTGATCGTTCCAACCATGA 58.859 39.130 0.00 0.00 0.00 3.07
665 667 4.023279 TGACTTTTGATCGTTCCAACCATG 60.023 41.667 0.00 0.00 0.00 3.66
666 668 4.141287 TGACTTTTGATCGTTCCAACCAT 58.859 39.130 0.00 0.00 0.00 3.55
667 669 3.546724 TGACTTTTGATCGTTCCAACCA 58.453 40.909 0.00 0.00 0.00 3.67
670 672 5.559991 CGTCATTGACTTTTGATCGTTCCAA 60.560 40.000 14.54 0.00 0.00 3.53
671 673 4.084066 CGTCATTGACTTTTGATCGTTCCA 60.084 41.667 14.54 0.00 0.00 3.53
672 674 4.394795 CGTCATTGACTTTTGATCGTTCC 58.605 43.478 14.54 0.00 0.00 3.62
673 675 3.840763 GCGTCATTGACTTTTGATCGTTC 59.159 43.478 14.54 0.00 0.00 3.95
674 676 3.664276 CGCGTCATTGACTTTTGATCGTT 60.664 43.478 14.54 0.00 0.00 3.85
675 677 2.159841 CGCGTCATTGACTTTTGATCGT 60.160 45.455 14.54 0.00 0.00 3.73
676 678 2.421523 CGCGTCATTGACTTTTGATCG 58.578 47.619 14.54 0.44 0.00 3.69
983 985 2.367894 TCCATTGATCTGCTGGAGCTAG 59.632 50.000 7.21 0.00 42.66 3.42
1020 1025 1.734477 GCACAAGAGAAGCGCGAGA 60.734 57.895 12.10 0.00 0.00 4.04
1149 1154 1.226717 GCGATTCGAGAAGGCGTCT 60.227 57.895 10.88 1.56 40.25 4.18
1385 1396 2.363147 GCTCCGTCACCTCCTCCT 60.363 66.667 0.00 0.00 0.00 3.69
1426 1437 2.202440 CGCGACGACCGAGAACAT 60.202 61.111 0.00 0.00 40.62 2.71
1463 1474 2.188829 ACGTGGTCCTCGTCGACAA 61.189 57.895 17.16 0.00 36.85 3.18
1464 1475 2.592574 ACGTGGTCCTCGTCGACA 60.593 61.111 17.16 1.87 36.85 4.35
1574 1585 3.325753 GCAGCCACCTCCACTCCT 61.326 66.667 0.00 0.00 0.00 3.69
1773 1790 1.596477 GATCAGCCGCACCATCTCC 60.596 63.158 0.00 0.00 0.00 3.71
1794 1811 4.394712 CCGGCGCCAAGGAACTCT 62.395 66.667 28.98 0.00 38.49 3.24
1992 2015 0.752743 CATGGACATGGCGTGGGATT 60.753 55.000 12.05 0.00 35.24 3.01
2070 2093 1.927174 CCGGCAGAGAAATTGACGTAG 59.073 52.381 0.00 0.00 45.40 3.51
2088 2111 1.450312 GTCCCTGCCAATGTCTCCG 60.450 63.158 0.00 0.00 0.00 4.63
2091 2114 0.478072 TGTTGTCCCTGCCAATGTCT 59.522 50.000 0.00 0.00 0.00 3.41
2193 2216 1.883678 TCATCCTGATCTGCTTGGGA 58.116 50.000 0.00 0.00 0.00 4.37
2382 2405 1.370778 CGTGACACGTGCGGTAAGA 60.371 57.895 19.77 0.00 36.74 2.10
2502 3660 2.358247 GGACAAGCTTTCCGCGGA 60.358 61.111 27.28 27.28 45.59 5.54
2516 3674 1.531578 GACAGAAAACGGCAGAAGGAC 59.468 52.381 0.00 0.00 0.00 3.85
2560 3718 3.308188 GCCACACCCAAACTAGATAGGTT 60.308 47.826 0.00 0.00 32.39 3.50
2562 3720 2.505819 AGCCACACCCAAACTAGATAGG 59.494 50.000 0.00 0.00 0.00 2.57
2579 3757 0.613260 AGCCAATTGAGACGTAGCCA 59.387 50.000 7.12 0.00 0.00 4.75
2585 3763 5.063564 GGTTAAGTCTTAGCCAATTGAGACG 59.936 44.000 17.99 0.00 42.46 4.18
2687 3865 8.749354 TGTCATGCTATATTCGTGGTATCTTAT 58.251 33.333 0.00 0.00 0.00 1.73
2744 4340 2.055042 GCGAGCTGAGGGAAGGAGA 61.055 63.158 0.00 0.00 0.00 3.71
2763 4456 3.698539 TCATGGTCACAAAACACATGTGT 59.301 39.130 25.76 25.76 46.42 3.72
2908 4614 6.824553 ACTGATTAGCTTCTCTGCATGAATA 58.175 36.000 0.00 0.00 34.99 1.75
2948 4655 0.178301 GAGACCGGGAGATCAAACCC 59.822 60.000 6.32 11.16 42.43 4.11
2954 4661 2.851071 CGCAGGAGACCGGGAGATC 61.851 68.421 6.32 0.00 0.00 2.75
2966 4673 1.908299 TGAGAGAGGTTGCGCAGGA 60.908 57.895 11.31 0.00 0.00 3.86
2967 4674 1.739562 GTGAGAGAGGTTGCGCAGG 60.740 63.158 11.31 0.00 0.00 4.85
2968 4675 1.005748 TGTGAGAGAGGTTGCGCAG 60.006 57.895 11.31 0.00 0.00 5.18
2969 4676 1.300931 GTGTGAGAGAGGTTGCGCA 60.301 57.895 5.66 5.66 0.00 6.09
2970 4677 0.671781 ATGTGTGAGAGAGGTTGCGC 60.672 55.000 0.00 0.00 0.00 6.09
2971 4678 1.462283 CAATGTGTGAGAGAGGTTGCG 59.538 52.381 0.00 0.00 0.00 4.85
2972 4679 1.198637 GCAATGTGTGAGAGAGGTTGC 59.801 52.381 0.00 0.00 34.52 4.17
2973 4680 1.808945 GGCAATGTGTGAGAGAGGTTG 59.191 52.381 0.00 0.00 0.00 3.77
2974 4681 1.421268 TGGCAATGTGTGAGAGAGGTT 59.579 47.619 0.00 0.00 0.00 3.50
2975 4682 1.059098 TGGCAATGTGTGAGAGAGGT 58.941 50.000 0.00 0.00 0.00 3.85
2976 4683 2.189594 TTGGCAATGTGTGAGAGAGG 57.810 50.000 0.00 0.00 0.00 3.69
2977 4684 4.216902 TGATTTTGGCAATGTGTGAGAGAG 59.783 41.667 0.00 0.00 0.00 3.20
2978 4685 4.022935 GTGATTTTGGCAATGTGTGAGAGA 60.023 41.667 0.00 0.00 0.00 3.10
2979 4686 4.022589 AGTGATTTTGGCAATGTGTGAGAG 60.023 41.667 0.00 0.00 0.00 3.20
3006 4713 6.431198 AAATGTACCCGCTAAATAACACAG 57.569 37.500 0.00 0.00 0.00 3.66
3020 4727 4.776795 AACAATGGAACGAAATGTACCC 57.223 40.909 0.00 0.00 0.00 3.69
3030 4737 5.360591 AGATAGCCTTCTAACAATGGAACG 58.639 41.667 0.00 0.00 0.00 3.95
3034 4741 5.936956 GGATGAGATAGCCTTCTAACAATGG 59.063 44.000 0.00 0.00 0.00 3.16
3036 4743 5.279708 CGGGATGAGATAGCCTTCTAACAAT 60.280 44.000 0.00 0.00 34.44 2.71
3151 4858 0.439985 CATCACACCAAGACGCTTCG 59.560 55.000 0.00 0.00 0.00 3.79
3157 4864 4.278170 TGAAATGAACCATCACACCAAGAC 59.722 41.667 0.00 0.00 38.69 3.01
3170 4877 5.120674 GGCAAAGCAAACTATGAAATGAACC 59.879 40.000 0.00 0.00 0.00 3.62
3172 4879 5.851720 TGGCAAAGCAAACTATGAAATGAA 58.148 33.333 0.00 0.00 0.00 2.57
3209 4916 6.785191 AGATTGCAACCGTATAAGTTGATTG 58.215 36.000 17.09 3.92 46.03 2.67
3254 4961 3.489785 CGACCAAATAAGTCATCGTAGCC 59.510 47.826 0.00 0.00 33.70 3.93
3307 5014 2.300723 AGGCTAATGTTGTGACGTGGTA 59.699 45.455 0.00 0.00 0.00 3.25
3312 5019 4.091509 GTCACTTAGGCTAATGTTGTGACG 59.908 45.833 27.35 10.70 41.73 4.35
3349 5056 5.354513 TGATGAGTCTATATGCGTAGGTAGC 59.645 44.000 0.00 0.00 0.00 3.58
3356 5063 5.167121 GCAAGATGATGAGTCTATATGCGT 58.833 41.667 0.00 0.00 0.00 5.24
3357 5064 5.166398 TGCAAGATGATGAGTCTATATGCG 58.834 41.667 0.00 0.00 33.00 4.73
3358 5065 7.414208 CCATTGCAAGATGATGAGTCTATATGC 60.414 40.741 4.94 0.00 0.00 3.14
3359 5066 7.065923 CCCATTGCAAGATGATGAGTCTATATG 59.934 40.741 4.94 0.00 0.00 1.78
3360 5067 7.110810 CCCATTGCAAGATGATGAGTCTATAT 58.889 38.462 4.94 0.00 0.00 0.86
3361 5068 6.043590 ACCCATTGCAAGATGATGAGTCTATA 59.956 38.462 4.94 0.00 0.00 1.31
3362 5069 5.163120 ACCCATTGCAAGATGATGAGTCTAT 60.163 40.000 4.94 0.00 0.00 1.98
3363 5070 4.164796 ACCCATTGCAAGATGATGAGTCTA 59.835 41.667 4.94 0.00 0.00 2.59
3364 5071 3.053842 ACCCATTGCAAGATGATGAGTCT 60.054 43.478 4.94 0.00 0.00 3.24
3365 5072 3.066342 CACCCATTGCAAGATGATGAGTC 59.934 47.826 4.94 0.00 0.00 3.36
3366 5073 3.021695 CACCCATTGCAAGATGATGAGT 58.978 45.455 4.94 0.00 0.00 3.41
3367 5074 2.361119 CCACCCATTGCAAGATGATGAG 59.639 50.000 4.94 0.00 0.00 2.90
3368 5075 2.025131 TCCACCCATTGCAAGATGATGA 60.025 45.455 4.94 0.00 0.00 2.92
3369 5076 2.361119 CTCCACCCATTGCAAGATGATG 59.639 50.000 4.94 0.00 0.00 3.07
3370 5077 2.662866 CTCCACCCATTGCAAGATGAT 58.337 47.619 4.94 0.00 0.00 2.45
3371 5078 1.341285 CCTCCACCCATTGCAAGATGA 60.341 52.381 4.94 0.00 0.00 2.92
3372 5079 1.108776 CCTCCACCCATTGCAAGATG 58.891 55.000 4.94 0.00 0.00 2.90
3373 5080 1.002069 TCCTCCACCCATTGCAAGAT 58.998 50.000 4.94 0.00 0.00 2.40
3374 5081 0.776810 TTCCTCCACCCATTGCAAGA 59.223 50.000 4.94 0.00 0.00 3.02
3375 5082 1.547372 CTTTCCTCCACCCATTGCAAG 59.453 52.381 4.94 0.00 0.00 4.01
3376 5083 1.146774 TCTTTCCTCCACCCATTGCAA 59.853 47.619 0.00 0.00 0.00 4.08
3377 5084 0.776810 TCTTTCCTCCACCCATTGCA 59.223 50.000 0.00 0.00 0.00 4.08
3378 5085 2.149973 ATCTTTCCTCCACCCATTGC 57.850 50.000 0.00 0.00 0.00 3.56
3379 5086 5.509498 TCTAAATCTTTCCTCCACCCATTG 58.491 41.667 0.00 0.00 0.00 2.82
3380 5087 5.796502 TCTAAATCTTTCCTCCACCCATT 57.203 39.130 0.00 0.00 0.00 3.16
3381 5088 7.295672 TCATATCTAAATCTTTCCTCCACCCAT 59.704 37.037 0.00 0.00 0.00 4.00
3382 5089 6.619437 TCATATCTAAATCTTTCCTCCACCCA 59.381 38.462 0.00 0.00 0.00 4.51
3383 5090 7.016661 TCTCATATCTAAATCTTTCCTCCACCC 59.983 40.741 0.00 0.00 0.00 4.61
3384 5091 7.967908 TCTCATATCTAAATCTTTCCTCCACC 58.032 38.462 0.00 0.00 0.00 4.61
3385 5092 9.267084 GTTCTCATATCTAAATCTTTCCTCCAC 57.733 37.037 0.00 0.00 0.00 4.02
3386 5093 8.992349 TGTTCTCATATCTAAATCTTTCCTCCA 58.008 33.333 0.00 0.00 0.00 3.86
3387 5094 9.838339 TTGTTCTCATATCTAAATCTTTCCTCC 57.162 33.333 0.00 0.00 0.00 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.