Multiple sequence alignment - TraesCS2B01G034500

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G034500 chr2B 100.000 2378 0 0 1 2378 16846680 16849057 0.000000e+00 4392.0
1 TraesCS2B01G034500 chr2B 81.818 869 98 26 767 1583 16828623 16829483 0.000000e+00 675.0
2 TraesCS2B01G034500 chr2B 93.927 247 14 1 476 722 228762227 228762472 2.890000e-99 372.0
3 TraesCS2B01G034500 chr2B 83.495 206 24 9 2175 2378 781582920 781582723 1.450000e-42 183.0
4 TraesCS2B01G034500 chr2D 86.739 920 81 21 721 1618 11029883 11030783 0.000000e+00 985.0
5 TraesCS2B01G034500 chr2D 82.673 606 66 20 1005 1582 10986649 10987243 3.530000e-138 501.0
6 TraesCS2B01G034500 chr2D 86.500 400 37 7 1188 1582 11023148 11023535 7.860000e-115 424.0
7 TraesCS2B01G034500 chr2D 87.923 207 22 2 767 970 10986436 10986642 8.490000e-60 241.0
8 TraesCS2B01G034500 chr2D 94.118 85 3 2 794 877 11028076 11028159 6.900000e-26 128.0
9 TraesCS2B01G034500 chr2D 89.535 86 9 0 384 469 11022760 11022845 2.500000e-20 110.0
10 TraesCS2B01G034500 chr2D 86.000 100 12 1 353 450 10986461 10986560 3.230000e-19 106.0
11 TraesCS2B01G034500 chr2D 91.667 72 6 0 367 438 11028088 11028159 1.500000e-17 100.0
12 TraesCS2B01G034500 chr2D 97.059 34 1 0 270 303 10986329 10986362 9.180000e-05 58.4
13 TraesCS2B01G034500 chrUn 87.981 832 68 14 767 1570 12174314 12175141 0.000000e+00 953.0
14 TraesCS2B01G034500 chrUn 83.480 793 85 24 824 1582 12171133 12171913 0.000000e+00 697.0
15 TraesCS2B01G034500 chrUn 85.588 451 48 12 1147 1582 470921000 470920552 7.750000e-125 457.0
16 TraesCS2B01G034500 chrUn 89.535 86 9 0 384 469 12171132 12171217 2.500000e-20 110.0
17 TraesCS2B01G034500 chrUn 89.535 86 9 0 384 469 467992731 467992816 2.500000e-20 110.0
18 TraesCS2B01G034500 chrUn 97.059 34 1 0 270 303 12174323 12174356 9.180000e-05 58.4
19 TraesCS2B01G034500 chr2A 81.842 749 94 22 767 1485 11649740 11650476 2.040000e-165 592.0
20 TraesCS2B01G034500 chr2A 81.842 749 94 22 767 1485 11690791 11691527 2.040000e-165 592.0
21 TraesCS2B01G034500 chr2A 89.167 120 11 2 1464 1582 11933366 11933248 5.300000e-32 148.0
22 TraesCS2B01G034500 chr2A 85.124 121 16 2 2049 2167 678144720 678144840 3.210000e-24 122.0
23 TraesCS2B01G034500 chr2A 91.781 73 5 1 1506 1578 11695662 11695733 1.500000e-17 100.0
24 TraesCS2B01G034500 chr7B 96.203 237 9 0 487 723 513064691 513064927 2.870000e-104 388.0
25 TraesCS2B01G034500 chr4D 95.359 237 11 0 486 722 331068123 331067887 6.200000e-101 377.0
26 TraesCS2B01G034500 chr7A 95.339 236 9 2 488 722 467422537 467422771 8.030000e-100 374.0
27 TraesCS2B01G034500 chr7A 74.206 504 92 26 1684 2170 672944073 672943591 2.430000e-40 176.0
28 TraesCS2B01G034500 chr7A 86.364 110 10 5 2169 2276 625361446 625361552 5.370000e-22 115.0
29 TraesCS2B01G034500 chr5D 94.979 239 11 1 487 725 129481345 129481582 8.030000e-100 374.0
30 TraesCS2B01G034500 chr5D 81.452 124 17 6 2186 2308 320397308 320397190 1.950000e-16 97.1
31 TraesCS2B01G034500 chr5B 94.286 245 12 2 479 723 64729887 64730129 8.030000e-100 374.0
32 TraesCS2B01G034500 chr7D 93.902 246 14 1 477 722 45145481 45145725 1.040000e-98 370.0
33 TraesCS2B01G034500 chr7D 76.647 501 92 17 1685 2167 521704946 521705439 1.090000e-63 254.0
34 TraesCS2B01G034500 chr7D 84.146 164 16 10 2150 2308 618768454 618768296 1.470000e-32 150.0
35 TraesCS2B01G034500 chr1B 93.254 252 15 2 472 722 24633721 24633971 1.040000e-98 370.0
36 TraesCS2B01G034500 chr6D 93.902 246 11 4 487 732 62228755 62228514 3.730000e-98 368.0
37 TraesCS2B01G034500 chr4B 77.407 540 94 18 1652 2170 666594731 666594199 1.790000e-76 296.0
38 TraesCS2B01G034500 chr6B 76.727 550 88 26 1654 2167 256346354 256346899 1.080000e-68 270.0
39 TraesCS2B01G034500 chr6B 80.080 251 35 7 1930 2167 430561460 430561708 3.140000e-39 172.0
40 TraesCS2B01G034500 chr3B 76.427 543 85 26 1641 2167 123633706 123633191 1.090000e-63 254.0
41 TraesCS2B01G034500 chr3B 81.143 175 20 8 2008 2170 25214823 25214650 6.900000e-26 128.0
42 TraesCS2B01G034500 chr1A 86.861 137 10 8 2176 2308 290366581 290366713 1.900000e-31 147.0
43 TraesCS2B01G034500 chr1D 81.366 161 20 9 2150 2306 445363390 445363544 3.210000e-24 122.0
44 TraesCS2B01G034500 chr1D 83.459 133 17 5 2176 2306 446480068 446479939 4.150000e-23 119.0
45 TraesCS2B01G034500 chr1D 81.600 125 17 6 2047 2167 27355888 27356010 5.410000e-17 99.0
46 TraesCS2B01G034500 chr5A 83.721 129 14 6 2175 2302 36952855 36952733 5.370000e-22 115.0
47 TraesCS2B01G034500 chr3D 84.615 117 11 7 2193 2308 511739866 511739976 2.500000e-20 110.0
48 TraesCS2B01G034500 chr6A 79.286 140 15 7 37 162 457096445 457096584 4.210000e-13 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G034500 chr2B 16846680 16849057 2377 False 4392.000000 4392 100.000000 1 2378 1 chr2B.!!$F2 2377
1 TraesCS2B01G034500 chr2B 16828623 16829483 860 False 675.000000 675 81.818000 767 1583 1 chr2B.!!$F1 816
2 TraesCS2B01G034500 chr2D 11028076 11030783 2707 False 404.333333 985 90.841333 367 1618 3 chr2D.!!$F3 1251
3 TraesCS2B01G034500 chr2D 11022760 11023535 775 False 267.000000 424 88.017500 384 1582 2 chr2D.!!$F2 1198
4 TraesCS2B01G034500 chr2D 10986329 10987243 914 False 226.600000 501 88.413750 270 1582 4 chr2D.!!$F1 1312
5 TraesCS2B01G034500 chrUn 12171132 12175141 4009 False 454.600000 953 89.513750 270 1582 4 chrUn.!!$F2 1312
6 TraesCS2B01G034500 chr2A 11649740 11650476 736 False 592.000000 592 81.842000 767 1485 1 chr2A.!!$F1 718
7 TraesCS2B01G034500 chr2A 11690791 11691527 736 False 592.000000 592 81.842000 767 1485 1 chr2A.!!$F2 718
8 TraesCS2B01G034500 chr4B 666594199 666594731 532 True 296.000000 296 77.407000 1652 2170 1 chr4B.!!$R1 518
9 TraesCS2B01G034500 chr6B 256346354 256346899 545 False 270.000000 270 76.727000 1654 2167 1 chr6B.!!$F1 513
10 TraesCS2B01G034500 chr3B 123633191 123633706 515 True 254.000000 254 76.427000 1641 2167 1 chr3B.!!$R2 526

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
695 3418 0.097674 CCAGAGAATTTCCAAGCGCG 59.902 55.0 0.0 0.0 0.0 6.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1763 6357 0.554305 TGGGACGGCATAGACTAGGA 59.446 55.0 0.0 0.0 0.0 2.94 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
72 73 9.883142 TTTTGTAAGAAAGAATGAATTGGTGTT 57.117 25.926 0.00 0.00 0.00 3.32
132 133 7.517614 AAAACCACAAAATTTGGACAAAACT 57.482 28.000 10.71 0.00 37.58 2.66
133 134 7.517614 AAACCACAAAATTTGGACAAAACTT 57.482 28.000 10.71 0.00 37.58 2.66
134 135 8.622948 AAACCACAAAATTTGGACAAAACTTA 57.377 26.923 10.71 0.00 37.58 2.24
135 136 7.603963 ACCACAAAATTTGGACAAAACTTAC 57.396 32.000 10.71 0.00 37.58 2.34
136 137 7.162082 ACCACAAAATTTGGACAAAACTTACA 58.838 30.769 10.71 0.00 37.58 2.41
137 138 7.118535 ACCACAAAATTTGGACAAAACTTACAC 59.881 33.333 10.71 0.00 37.58 2.90
138 139 7.118390 CCACAAAATTTGGACAAAACTTACACA 59.882 33.333 10.71 0.00 36.02 3.72
139 140 8.167985 CACAAAATTTGGACAAAACTTACACAG 58.832 33.333 10.71 0.00 33.56 3.66
140 141 8.091449 ACAAAATTTGGACAAAACTTACACAGA 58.909 29.630 10.71 0.00 33.56 3.41
141 142 8.930760 CAAAATTTGGACAAAACTTACACAGAA 58.069 29.630 1.17 0.00 33.56 3.02
142 143 9.495572 AAAATTTGGACAAAACTTACACAGAAA 57.504 25.926 1.17 0.00 33.56 2.52
143 144 9.665719 AAATTTGGACAAAACTTACACAGAAAT 57.334 25.926 1.17 0.00 33.56 2.17
144 145 9.665719 AATTTGGACAAAACTTACACAGAAATT 57.334 25.926 1.17 0.00 33.56 1.82
145 146 8.472683 TTTGGACAAAACTTACACAGAAATTG 57.527 30.769 0.00 0.00 0.00 2.32
146 147 6.039616 TGGACAAAACTTACACAGAAATTGC 58.960 36.000 0.00 0.00 0.00 3.56
147 148 5.173131 GGACAAAACTTACACAGAAATTGCG 59.827 40.000 0.00 0.00 0.00 4.85
148 149 4.502645 ACAAAACTTACACAGAAATTGCGC 59.497 37.500 0.00 0.00 0.00 6.09
149 150 2.989422 ACTTACACAGAAATTGCGCC 57.011 45.000 4.18 0.00 0.00 6.53
150 151 2.504367 ACTTACACAGAAATTGCGCCT 58.496 42.857 4.18 0.00 0.00 5.52
151 152 2.884639 ACTTACACAGAAATTGCGCCTT 59.115 40.909 4.18 0.00 0.00 4.35
152 153 3.317993 ACTTACACAGAAATTGCGCCTTT 59.682 39.130 4.18 4.61 0.00 3.11
153 154 2.888834 ACACAGAAATTGCGCCTTTT 57.111 40.000 4.18 4.39 0.00 2.27
154 155 3.177997 ACACAGAAATTGCGCCTTTTT 57.822 38.095 4.18 1.42 0.00 1.94
155 156 4.314740 ACACAGAAATTGCGCCTTTTTA 57.685 36.364 4.18 0.00 0.00 1.52
156 157 4.048504 ACACAGAAATTGCGCCTTTTTAC 58.951 39.130 4.18 0.00 0.00 2.01
157 158 4.047822 CACAGAAATTGCGCCTTTTTACA 58.952 39.130 4.18 0.00 0.00 2.41
158 159 4.505922 CACAGAAATTGCGCCTTTTTACAA 59.494 37.500 4.18 0.00 0.00 2.41
159 160 5.177327 CACAGAAATTGCGCCTTTTTACAAT 59.823 36.000 4.18 0.00 34.30 2.71
160 161 6.364706 CACAGAAATTGCGCCTTTTTACAATA 59.635 34.615 4.18 0.00 32.63 1.90
161 162 7.063308 CACAGAAATTGCGCCTTTTTACAATAT 59.937 33.333 4.18 0.00 32.63 1.28
162 163 8.247562 ACAGAAATTGCGCCTTTTTACAATATA 58.752 29.630 4.18 0.00 32.63 0.86
163 164 9.248291 CAGAAATTGCGCCTTTTTACAATATAT 57.752 29.630 4.18 0.00 32.63 0.86
164 165 9.816354 AGAAATTGCGCCTTTTTACAATATATT 57.184 25.926 4.18 0.00 32.63 1.28
168 169 9.893305 ATTGCGCCTTTTTACAATATATTAGAC 57.107 29.630 4.18 0.00 31.20 2.59
169 170 8.439993 TGCGCCTTTTTACAATATATTAGACA 57.560 30.769 4.18 0.00 0.00 3.41
170 171 9.062524 TGCGCCTTTTTACAATATATTAGACAT 57.937 29.630 4.18 0.00 0.00 3.06
171 172 9.329913 GCGCCTTTTTACAATATATTAGACATG 57.670 33.333 0.00 0.00 0.00 3.21
185 186 3.914426 AGACATGTACCCATTGAGTCC 57.086 47.619 0.00 0.00 0.00 3.85
186 187 3.181329 AGACATGTACCCATTGAGTCCA 58.819 45.455 0.00 0.00 0.00 4.02
187 188 3.055094 AGACATGTACCCATTGAGTCCAC 60.055 47.826 0.00 0.00 0.00 4.02
188 189 2.279741 CATGTACCCATTGAGTCCACG 58.720 52.381 0.00 0.00 0.00 4.94
189 190 0.611200 TGTACCCATTGAGTCCACGG 59.389 55.000 0.00 0.00 0.00 4.94
190 191 0.899720 GTACCCATTGAGTCCACGGA 59.100 55.000 0.00 0.00 0.00 4.69
191 192 1.134788 GTACCCATTGAGTCCACGGAG 60.135 57.143 0.00 0.00 0.00 4.63
192 193 1.450312 CCCATTGAGTCCACGGAGC 60.450 63.158 0.00 0.00 0.00 4.70
193 194 1.296392 CCATTGAGTCCACGGAGCA 59.704 57.895 0.00 0.00 0.00 4.26
194 195 0.107508 CCATTGAGTCCACGGAGCAT 60.108 55.000 0.00 0.00 0.00 3.79
195 196 1.679944 CCATTGAGTCCACGGAGCATT 60.680 52.381 0.00 0.00 0.00 3.56
196 197 2.086869 CATTGAGTCCACGGAGCATTT 58.913 47.619 0.00 0.00 0.00 2.32
197 198 2.270352 TTGAGTCCACGGAGCATTTT 57.730 45.000 0.00 0.00 0.00 1.82
198 199 1.808411 TGAGTCCACGGAGCATTTTC 58.192 50.000 0.00 0.00 0.00 2.29
199 200 1.071542 TGAGTCCACGGAGCATTTTCA 59.928 47.619 0.00 0.00 0.00 2.69
200 201 1.734465 GAGTCCACGGAGCATTTTCAG 59.266 52.381 0.00 0.00 0.00 3.02
201 202 1.072331 AGTCCACGGAGCATTTTCAGT 59.928 47.619 0.00 0.00 0.00 3.41
202 203 1.464997 GTCCACGGAGCATTTTCAGTC 59.535 52.381 0.00 0.00 0.00 3.51
203 204 1.071542 TCCACGGAGCATTTTCAGTCA 59.928 47.619 0.00 0.00 0.00 3.41
204 205 1.466167 CCACGGAGCATTTTCAGTCAG 59.534 52.381 0.00 0.00 0.00 3.51
205 206 1.466167 CACGGAGCATTTTCAGTCAGG 59.534 52.381 0.00 0.00 0.00 3.86
206 207 0.449388 CGGAGCATTTTCAGTCAGGC 59.551 55.000 0.00 0.00 0.00 4.85
207 208 0.813821 GGAGCATTTTCAGTCAGGCC 59.186 55.000 0.00 0.00 0.00 5.19
208 209 1.538047 GAGCATTTTCAGTCAGGCCA 58.462 50.000 5.01 0.00 0.00 5.36
209 210 1.471684 GAGCATTTTCAGTCAGGCCAG 59.528 52.381 5.01 0.00 0.00 4.85
210 211 1.074405 AGCATTTTCAGTCAGGCCAGA 59.926 47.619 5.01 0.00 0.00 3.86
211 212 1.200948 GCATTTTCAGTCAGGCCAGAC 59.799 52.381 20.06 20.06 38.81 3.51
213 214 2.550830 TTTTCAGTCAGGCCAGACTC 57.449 50.000 26.63 2.54 45.35 3.36
214 215 1.423584 TTTCAGTCAGGCCAGACTCA 58.576 50.000 26.63 13.36 45.35 3.41
215 216 0.681733 TTCAGTCAGGCCAGACTCAC 59.318 55.000 26.63 2.00 45.35 3.51
216 217 0.469892 TCAGTCAGGCCAGACTCACA 60.470 55.000 26.63 11.77 45.35 3.58
217 218 0.394192 CAGTCAGGCCAGACTCACAA 59.606 55.000 26.63 0.00 45.35 3.33
218 219 1.131638 AGTCAGGCCAGACTCACAAA 58.868 50.000 24.12 0.00 45.35 2.83
219 220 1.490490 AGTCAGGCCAGACTCACAAAA 59.510 47.619 24.12 0.00 45.35 2.44
220 221 1.604278 GTCAGGCCAGACTCACAAAAC 59.396 52.381 20.34 0.00 35.65 2.43
221 222 0.954452 CAGGCCAGACTCACAAAACC 59.046 55.000 5.01 0.00 0.00 3.27
222 223 0.535102 AGGCCAGACTCACAAAACCG 60.535 55.000 5.01 0.00 0.00 4.44
223 224 1.282875 GCCAGACTCACAAAACCGC 59.717 57.895 0.00 0.00 0.00 5.68
224 225 1.166531 GCCAGACTCACAAAACCGCT 61.167 55.000 0.00 0.00 0.00 5.52
225 226 1.876416 GCCAGACTCACAAAACCGCTA 60.876 52.381 0.00 0.00 0.00 4.26
226 227 2.699954 CCAGACTCACAAAACCGCTAT 58.300 47.619 0.00 0.00 0.00 2.97
227 228 3.074412 CCAGACTCACAAAACCGCTATT 58.926 45.455 0.00 0.00 0.00 1.73
228 229 3.120199 CCAGACTCACAAAACCGCTATTG 60.120 47.826 0.00 0.00 0.00 1.90
229 230 2.484264 AGACTCACAAAACCGCTATTGC 59.516 45.455 0.00 0.00 0.00 3.56
230 231 1.539827 ACTCACAAAACCGCTATTGCC 59.460 47.619 0.00 0.00 35.36 4.52
231 232 0.885196 TCACAAAACCGCTATTGCCC 59.115 50.000 0.00 0.00 35.36 5.36
232 233 0.887933 CACAAAACCGCTATTGCCCT 59.112 50.000 0.00 0.00 35.36 5.19
233 234 1.135402 CACAAAACCGCTATTGCCCTC 60.135 52.381 0.00 0.00 35.36 4.30
234 235 1.173043 CAAAACCGCTATTGCCCTCA 58.827 50.000 0.00 0.00 35.36 3.86
235 236 1.133025 CAAAACCGCTATTGCCCTCAG 59.867 52.381 0.00 0.00 35.36 3.35
236 237 1.032114 AAACCGCTATTGCCCTCAGC 61.032 55.000 0.00 0.00 44.14 4.26
245 246 2.188994 GCCCTCAGCGCTCAGATT 59.811 61.111 11.01 0.00 0.00 2.40
246 247 1.451028 GCCCTCAGCGCTCAGATTT 60.451 57.895 11.01 0.00 0.00 2.17
247 248 1.028868 GCCCTCAGCGCTCAGATTTT 61.029 55.000 11.01 0.00 0.00 1.82
248 249 1.457346 CCCTCAGCGCTCAGATTTTT 58.543 50.000 11.01 0.00 0.00 1.94
249 250 1.399791 CCCTCAGCGCTCAGATTTTTC 59.600 52.381 11.01 0.00 0.00 2.29
250 251 1.061711 CCTCAGCGCTCAGATTTTTCG 59.938 52.381 11.01 0.00 0.00 3.46
251 252 0.443869 TCAGCGCTCAGATTTTTCGC 59.556 50.000 7.13 0.00 45.34 4.70
252 253 0.522076 CAGCGCTCAGATTTTTCGCC 60.522 55.000 7.13 0.00 46.04 5.54
253 254 1.226407 GCGCTCAGATTTTTCGCCC 60.226 57.895 0.00 0.00 39.91 6.13
254 255 1.060937 CGCTCAGATTTTTCGCCCG 59.939 57.895 0.00 0.00 0.00 6.13
255 256 1.429423 GCTCAGATTTTTCGCCCGG 59.571 57.895 0.00 0.00 0.00 5.73
256 257 1.429423 CTCAGATTTTTCGCCCGGC 59.571 57.895 0.00 0.00 0.00 6.13
267 268 3.658048 GCCCGGCGTAAACTTGAA 58.342 55.556 6.01 0.00 0.00 2.69
268 269 1.500396 GCCCGGCGTAAACTTGAAG 59.500 57.895 6.01 0.00 0.00 3.02
273 274 2.348666 CCGGCGTAAACTTGAAGATCTG 59.651 50.000 6.01 0.00 0.00 2.90
303 304 8.450578 TGGCACTAAAATTAGATGTTAGGATG 57.549 34.615 7.17 0.00 34.84 3.51
304 305 8.052748 TGGCACTAAAATTAGATGTTAGGATGT 58.947 33.333 7.17 0.00 34.84 3.06
305 306 8.903820 GGCACTAAAATTAGATGTTAGGATGTT 58.096 33.333 7.17 0.00 34.84 2.71
311 312 9.628500 AAAATTAGATGTTAGGATGTTAGGACC 57.372 33.333 0.00 0.00 0.00 4.46
312 313 7.931015 ATTAGATGTTAGGATGTTAGGACCA 57.069 36.000 0.00 0.00 0.00 4.02
313 314 5.615925 AGATGTTAGGATGTTAGGACCAC 57.384 43.478 0.00 0.00 0.00 4.16
314 315 3.880047 TGTTAGGATGTTAGGACCACG 57.120 47.619 0.00 0.00 0.00 4.94
315 316 3.167485 TGTTAGGATGTTAGGACCACGT 58.833 45.455 0.00 0.00 0.00 4.49
316 317 3.056393 TGTTAGGATGTTAGGACCACGTG 60.056 47.826 9.08 9.08 0.00 4.49
317 318 1.933021 AGGATGTTAGGACCACGTGA 58.067 50.000 19.30 0.00 0.00 4.35
318 319 1.549170 AGGATGTTAGGACCACGTGAC 59.451 52.381 19.30 10.61 0.00 3.67
319 320 1.274167 GGATGTTAGGACCACGTGACA 59.726 52.381 19.30 12.67 35.55 3.58
320 321 2.093658 GGATGTTAGGACCACGTGACAT 60.094 50.000 19.30 17.11 41.39 3.06
321 322 3.131577 GGATGTTAGGACCACGTGACATA 59.868 47.826 19.30 9.89 39.77 2.29
322 323 4.202223 GGATGTTAGGACCACGTGACATAT 60.202 45.833 19.30 0.00 39.77 1.78
323 324 4.118093 TGTTAGGACCACGTGACATATG 57.882 45.455 19.30 0.00 0.00 1.78
324 325 3.512329 TGTTAGGACCACGTGACATATGT 59.488 43.478 19.30 8.43 0.00 2.29
325 326 2.672961 AGGACCACGTGACATATGTG 57.327 50.000 19.30 1.19 44.31 3.21
331 332 3.925688 CACGTGACATATGTGGTAAGC 57.074 47.619 14.43 0.00 41.62 3.09
332 333 3.521560 CACGTGACATATGTGGTAAGCT 58.478 45.455 14.43 0.00 41.62 3.74
333 334 4.678622 CACGTGACATATGTGGTAAGCTA 58.321 43.478 14.43 0.00 41.62 3.32
334 335 5.289595 CACGTGACATATGTGGTAAGCTAT 58.710 41.667 14.43 0.00 41.62 2.97
335 336 5.402568 CACGTGACATATGTGGTAAGCTATC 59.597 44.000 14.43 0.00 41.62 2.08
336 337 4.923871 CGTGACATATGTGGTAAGCTATCC 59.076 45.833 14.43 0.00 0.00 2.59
337 338 5.238583 GTGACATATGTGGTAAGCTATCCC 58.761 45.833 14.43 0.00 0.00 3.85
338 339 4.904853 TGACATATGTGGTAAGCTATCCCA 59.095 41.667 14.43 0.00 0.00 4.37
339 340 5.368230 TGACATATGTGGTAAGCTATCCCAA 59.632 40.000 14.43 0.00 0.00 4.12
340 341 5.621193 ACATATGTGGTAAGCTATCCCAAC 58.379 41.667 7.78 0.00 0.00 3.77
341 342 5.131977 ACATATGTGGTAAGCTATCCCAACA 59.868 40.000 7.78 2.55 0.00 3.33
342 343 4.584638 ATGTGGTAAGCTATCCCAACAA 57.415 40.909 0.85 0.00 0.00 2.83
343 344 4.584638 TGTGGTAAGCTATCCCAACAAT 57.415 40.909 0.85 0.00 0.00 2.71
344 345 4.929479 TGTGGTAAGCTATCCCAACAATT 58.071 39.130 0.85 0.00 0.00 2.32
345 346 4.947388 TGTGGTAAGCTATCCCAACAATTC 59.053 41.667 0.85 0.00 0.00 2.17
346 347 4.947388 GTGGTAAGCTATCCCAACAATTCA 59.053 41.667 0.85 0.00 0.00 2.57
347 348 5.417580 GTGGTAAGCTATCCCAACAATTCAA 59.582 40.000 0.85 0.00 0.00 2.69
348 349 6.013379 TGGTAAGCTATCCCAACAATTCAAA 58.987 36.000 4.91 0.00 0.00 2.69
349 350 6.495181 TGGTAAGCTATCCCAACAATTCAAAA 59.505 34.615 4.91 0.00 0.00 2.44
350 351 7.015682 TGGTAAGCTATCCCAACAATTCAAAAA 59.984 33.333 4.91 0.00 0.00 1.94
376 377 3.305720 ACTAGATGTCGGGATAAGGCAA 58.694 45.455 0.00 0.00 0.00 4.52
420 421 7.521509 AGTAAATCAAGACGTTTCGATAAGG 57.478 36.000 0.00 0.00 0.00 2.69
485 2161 9.930693 TCACCATTAATAAACCAACAAATTACC 57.069 29.630 0.00 0.00 0.00 2.85
486 2162 9.936759 CACCATTAATAAACCAACAAATTACCT 57.063 29.630 0.00 0.00 0.00 3.08
495 2171 5.567430 ACCAACAAATTACCTACTCCTTCC 58.433 41.667 0.00 0.00 0.00 3.46
496 2172 4.634443 CCAACAAATTACCTACTCCTTCCG 59.366 45.833 0.00 0.00 0.00 4.30
497 2173 5.243207 CAACAAATTACCTACTCCTTCCGT 58.757 41.667 0.00 0.00 0.00 4.69
498 2174 5.082251 ACAAATTACCTACTCCTTCCGTC 57.918 43.478 0.00 0.00 0.00 4.79
500 2176 4.732672 AATTACCTACTCCTTCCGTCAC 57.267 45.455 0.00 0.00 0.00 3.67
501 2177 2.885135 TACCTACTCCTTCCGTCACA 57.115 50.000 0.00 0.00 0.00 3.58
502 2178 1.546961 ACCTACTCCTTCCGTCACAG 58.453 55.000 0.00 0.00 0.00 3.66
503 2179 1.203025 ACCTACTCCTTCCGTCACAGT 60.203 52.381 0.00 0.00 0.00 3.55
504 2180 1.893801 CCTACTCCTTCCGTCACAGTT 59.106 52.381 0.00 0.00 0.00 3.16
505 2181 2.299297 CCTACTCCTTCCGTCACAGTTT 59.701 50.000 0.00 0.00 0.00 2.66
506 2182 3.508793 CCTACTCCTTCCGTCACAGTTTA 59.491 47.826 0.00 0.00 0.00 2.01
507 2183 3.662247 ACTCCTTCCGTCACAGTTTAG 57.338 47.619 0.00 0.00 0.00 1.85
508 2184 3.228453 ACTCCTTCCGTCACAGTTTAGA 58.772 45.455 0.00 0.00 0.00 2.10
510 2186 4.238514 CTCCTTCCGTCACAGTTTAGAAG 58.761 47.826 0.00 0.00 0.00 2.85
511 2187 3.326747 CCTTCCGTCACAGTTTAGAAGG 58.673 50.000 2.46 2.46 43.07 3.46
516 2374 2.476619 CGTCACAGTTTAGAAGGCACAG 59.523 50.000 0.00 0.00 0.00 3.66
517 2375 3.467803 GTCACAGTTTAGAAGGCACAGT 58.532 45.455 0.00 0.00 0.00 3.55
519 2377 5.054477 GTCACAGTTTAGAAGGCACAGTTA 58.946 41.667 0.00 0.00 0.00 2.24
526 2384 9.394477 CAGTTTAGAAGGCACAGTTAAATTTAC 57.606 33.333 0.00 0.00 0.00 2.01
527 2385 8.287503 AGTTTAGAAGGCACAGTTAAATTTACG 58.712 33.333 0.00 0.00 0.00 3.18
529 2387 5.997385 AGAAGGCACAGTTAAATTTACGTG 58.003 37.500 13.52 13.52 0.00 4.49
531 2389 5.103290 AGGCACAGTTAAATTTACGTGTG 57.897 39.130 23.30 23.30 38.64 3.82
536 2394 7.324449 GCACAGTTAAATTTACGTGTGTTTTC 58.676 34.615 25.73 14.26 38.04 2.29
537 2395 7.008447 GCACAGTTAAATTTACGTGTGTTTTCA 59.992 33.333 25.73 0.00 38.04 2.69
556 2414 8.410141 TGTTTTCACAATAGACAAGGTTTAAGG 58.590 33.333 0.00 0.00 0.00 2.69
557 2415 6.569179 TTCACAATAGACAAGGTTTAAGGC 57.431 37.500 0.00 0.00 0.00 4.35
559 2417 3.439129 ACAATAGACAAGGTTTAAGGCGC 59.561 43.478 0.00 0.00 0.00 6.53
560 2418 2.843401 TAGACAAGGTTTAAGGCGCA 57.157 45.000 10.83 0.00 0.00 6.09
562 2420 2.514803 AGACAAGGTTTAAGGCGCATT 58.485 42.857 13.52 13.52 0.00 3.56
563 2421 2.228822 AGACAAGGTTTAAGGCGCATTG 59.771 45.455 18.94 1.22 0.00 2.82
564 2422 1.336795 ACAAGGTTTAAGGCGCATTGC 60.337 47.619 18.94 7.40 45.38 3.56
579 2437 6.901699 GCGCATTGCATTTATTTCTAGTAG 57.098 37.500 9.69 0.00 45.45 2.57
581 2439 6.662616 CGCATTGCATTTATTTCTAGTAGCT 58.337 36.000 9.69 0.00 0.00 3.32
582 2440 7.571244 GCGCATTGCATTTATTTCTAGTAGCTA 60.571 37.037 9.69 0.00 45.45 3.32
595 2453 9.790344 ATTTCTAGTAGCTAATTAGTAGTCCGA 57.210 33.333 13.91 2.71 31.41 4.55
596 2454 9.790344 TTTCTAGTAGCTAATTAGTAGTCCGAT 57.210 33.333 13.91 0.00 31.41 4.18
615 2681 9.682465 AGTCCGATAGTACTATTTCTATATGCA 57.318 33.333 16.46 0.00 0.00 3.96
618 2684 9.186323 CCGATAGTACTATTTCTATATGCATGC 57.814 37.037 16.46 11.82 0.00 4.06
631 2697 2.156446 GCATGCGCAGTGTGAATGC 61.156 57.895 29.18 29.18 40.35 3.56
632 2698 1.504900 CATGCGCAGTGTGAATGCT 59.495 52.632 18.32 0.00 41.61 3.79
635 2701 1.452110 TGCGCAGTGTGAATGCTATT 58.548 45.000 5.66 0.00 41.61 1.73
636 2702 1.811965 TGCGCAGTGTGAATGCTATTT 59.188 42.857 5.66 0.00 41.61 1.40
637 2703 2.228582 TGCGCAGTGTGAATGCTATTTT 59.771 40.909 5.66 0.00 41.61 1.82
658 3381 5.559148 TTTTAGCCCATTTCACAACCAAT 57.441 34.783 0.00 0.00 0.00 3.16
660 3383 5.913137 TTAGCCCATTTCACAACCAATAG 57.087 39.130 0.00 0.00 0.00 1.73
663 3386 5.765510 AGCCCATTTCACAACCAATAGATA 58.234 37.500 0.00 0.00 0.00 1.98
664 3387 6.194235 AGCCCATTTCACAACCAATAGATAA 58.806 36.000 0.00 0.00 0.00 1.75
666 3389 6.682861 GCCCATTTCACAACCAATAGATAACC 60.683 42.308 0.00 0.00 0.00 2.85
670 3393 5.772393 TCACAACCAATAGATAACCACCT 57.228 39.130 0.00 0.00 0.00 4.00
671 3394 6.877668 TCACAACCAATAGATAACCACCTA 57.122 37.500 0.00 0.00 0.00 3.08
672 3395 6.884832 TCACAACCAATAGATAACCACCTAG 58.115 40.000 0.00 0.00 0.00 3.02
673 3396 6.055588 CACAACCAATAGATAACCACCTAGG 58.944 44.000 7.41 7.41 45.67 3.02
683 3406 3.711849 CCACCTAGGTCCCAGAGAA 57.288 57.895 12.84 0.00 0.00 2.87
690 3413 3.523564 CCTAGGTCCCAGAGAATTTCCAA 59.476 47.826 0.00 0.00 0.00 3.53
691 3414 3.728385 AGGTCCCAGAGAATTTCCAAG 57.272 47.619 0.00 0.00 0.00 3.61
692 3415 2.095461 GGTCCCAGAGAATTTCCAAGC 58.905 52.381 0.00 0.00 0.00 4.01
693 3416 1.740025 GTCCCAGAGAATTTCCAAGCG 59.260 52.381 0.00 0.00 0.00 4.68
694 3417 0.453390 CCCAGAGAATTTCCAAGCGC 59.547 55.000 0.00 0.00 0.00 5.92
695 3418 0.097674 CCAGAGAATTTCCAAGCGCG 59.902 55.000 0.00 0.00 0.00 6.86
696 3419 0.522076 CAGAGAATTTCCAAGCGCGC 60.522 55.000 26.66 26.66 0.00 6.86
698 3421 1.648467 GAGAATTTCCAAGCGCGCCT 61.648 55.000 30.33 13.59 0.00 5.52
699 3422 1.212751 GAATTTCCAAGCGCGCCTT 59.787 52.632 30.33 18.49 0.00 4.35
700 3423 0.798389 GAATTTCCAAGCGCGCCTTC 60.798 55.000 30.33 14.83 0.00 3.46
702 3425 0.392461 ATTTCCAAGCGCGCCTTCTA 60.392 50.000 30.33 9.84 0.00 2.10
703 3426 0.604243 TTTCCAAGCGCGCCTTCTAA 60.604 50.000 30.33 14.41 0.00 2.10
704 3427 0.604243 TTCCAAGCGCGCCTTCTAAA 60.604 50.000 30.33 12.27 0.00 1.85
705 3428 1.134694 CCAAGCGCGCCTTCTAAAC 59.865 57.895 30.33 0.00 0.00 2.01
707 3430 2.388232 AAGCGCGCCTTCTAAACCG 61.388 57.895 30.33 0.00 0.00 4.44
710 3433 1.735198 CGCGCCTTCTAAACCGTGA 60.735 57.895 0.00 0.00 33.47 4.35
740 3463 6.294065 GGGAGTAGATCTACAGATAAACACCG 60.294 46.154 29.85 0.00 38.48 4.94
750 4820 3.935203 CAGATAAACACCGACATGAGCTT 59.065 43.478 0.00 0.00 0.00 3.74
751 4821 4.393062 CAGATAAACACCGACATGAGCTTT 59.607 41.667 0.00 0.00 0.00 3.51
801 5277 7.779798 TCCTAGCATTGGCACTAAAATTAGATT 59.220 33.333 7.17 0.00 44.61 2.40
822 5298 8.870075 AGATTTTAGGATAAGGCATAACCATC 57.130 34.615 0.00 0.00 43.14 3.51
835 5311 5.402398 GCATAACCATCTTCAAAAGTGGAC 58.598 41.667 12.29 0.00 35.23 4.02
954 5439 3.436700 TGGATGTACGCATACACAGAG 57.563 47.619 0.00 0.00 44.11 3.35
957 5442 2.734276 TGTACGCATACACAGAGCAA 57.266 45.000 0.00 0.00 36.34 3.91
975 5469 7.391833 ACAGAGCAATTTTACTTAGGAGGAAAG 59.608 37.037 0.00 0.00 37.04 2.62
980 5474 7.519002 CAATTTTACTTAGGAGGAAAGTCACG 58.481 38.462 0.00 0.00 37.04 4.35
1035 5529 3.007506 TGAAGAACATCGGCAAAGGACTA 59.992 43.478 0.00 0.00 0.00 2.59
1038 5532 4.589908 AGAACATCGGCAAAGGACTATTT 58.410 39.130 0.00 0.00 0.00 1.40
1087 5590 1.595109 CTGGTGACGCTGCTTGTCA 60.595 57.895 6.32 6.32 43.68 3.58
1099 5602 3.079578 CTGCTTGTCATGTCATCTGGTT 58.920 45.455 0.00 0.00 0.00 3.67
1101 5604 3.244665 TGCTTGTCATGTCATCTGGTTCT 60.245 43.478 0.00 0.00 0.00 3.01
1102 5605 3.126514 GCTTGTCATGTCATCTGGTTCTG 59.873 47.826 0.00 0.00 0.00 3.02
1103 5606 3.339253 TGTCATGTCATCTGGTTCTGG 57.661 47.619 0.00 0.00 0.00 3.86
1106 5609 4.285775 TGTCATGTCATCTGGTTCTGGTAA 59.714 41.667 0.00 0.00 0.00 2.85
1107 5610 4.872691 GTCATGTCATCTGGTTCTGGTAAG 59.127 45.833 0.00 0.00 0.00 2.34
1108 5611 3.334583 TGTCATCTGGTTCTGGTAAGC 57.665 47.619 0.00 0.00 0.00 3.09
1111 5614 4.716784 TGTCATCTGGTTCTGGTAAGCTAT 59.283 41.667 0.00 0.00 0.00 2.97
1112 5615 5.163405 TGTCATCTGGTTCTGGTAAGCTATC 60.163 44.000 0.00 0.00 0.00 2.08
1114 5617 5.663106 TCATCTGGTTCTGGTAAGCTATCTT 59.337 40.000 0.00 0.00 36.35 2.40
1115 5618 6.839134 TCATCTGGTTCTGGTAAGCTATCTTA 59.161 38.462 0.00 0.00 33.85 2.10
1116 5619 7.344612 TCATCTGGTTCTGGTAAGCTATCTTAA 59.655 37.037 0.00 0.00 36.62 1.85
1117 5620 7.113658 TCTGGTTCTGGTAAGCTATCTTAAG 57.886 40.000 0.00 0.00 36.62 1.85
1119 5622 7.399191 TCTGGTTCTGGTAAGCTATCTTAAGAA 59.601 37.037 9.71 0.00 36.62 2.52
1120 5623 7.913789 TGGTTCTGGTAAGCTATCTTAAGAAA 58.086 34.615 9.71 0.00 35.27 2.52
1121 5624 8.380099 TGGTTCTGGTAAGCTATCTTAAGAAAA 58.620 33.333 9.71 0.00 35.27 2.29
1122 5625 9.227777 GGTTCTGGTAAGCTATCTTAAGAAAAA 57.772 33.333 9.71 0.00 35.27 1.94
1179 5733 7.591006 TGCGAGTAGAAGTTAATTTAGTTGG 57.409 36.000 0.00 0.00 0.00 3.77
1218 5785 3.032265 TGAGAAGAGATGGGATCGGAA 57.968 47.619 0.00 0.00 0.00 4.30
1219 5786 3.374764 TGAGAAGAGATGGGATCGGAAA 58.625 45.455 0.00 0.00 0.00 3.13
1271 5841 4.507710 GACAACAGCTCATGTATCCTTCA 58.492 43.478 1.02 0.00 43.00 3.02
1391 5965 5.728637 TCCATCTAGCCATATATATGCCG 57.271 43.478 16.08 6.01 32.40 5.69
1438 6023 6.444633 GCTATTGCTATGAGTTCATGCATTT 58.555 36.000 15.08 10.77 38.83 2.32
1563 6155 1.522668 CCACTGTTCCGAATGCTCAA 58.477 50.000 0.00 0.00 0.00 3.02
1565 6157 3.270027 CCACTGTTCCGAATGCTCAATA 58.730 45.455 0.00 0.00 0.00 1.90
1606 6198 4.692155 CAGAACTTTCCATTGAAATTGGCC 59.308 41.667 0.00 0.00 39.65 5.36
1607 6199 4.347583 AGAACTTTCCATTGAAATTGGCCA 59.652 37.500 0.00 0.00 39.65 5.36
1608 6200 4.703379 ACTTTCCATTGAAATTGGCCAA 57.297 36.364 23.00 23.00 39.65 4.52
1609 6201 5.046288 ACTTTCCATTGAAATTGGCCAAA 57.954 34.783 24.71 5.61 39.65 3.28
1610 6202 5.444176 ACTTTCCATTGAAATTGGCCAAAA 58.556 33.333 24.71 12.87 39.65 2.44
1611 6203 6.069994 ACTTTCCATTGAAATTGGCCAAAAT 58.930 32.000 24.71 14.76 39.65 1.82
1612 6204 5.961396 TTCCATTGAAATTGGCCAAAATG 57.039 34.783 24.71 24.64 0.00 2.32
1613 6205 4.983053 TCCATTGAAATTGGCCAAAATGT 58.017 34.783 27.22 14.09 0.00 2.71
1614 6206 4.760715 TCCATTGAAATTGGCCAAAATGTG 59.239 37.500 27.22 21.20 0.00 3.21
1615 6207 4.760715 CCATTGAAATTGGCCAAAATGTGA 59.239 37.500 27.22 13.80 0.00 3.58
1616 6208 5.241064 CCATTGAAATTGGCCAAAATGTGAA 59.759 36.000 27.22 15.94 0.00 3.18
1617 6209 6.071840 CCATTGAAATTGGCCAAAATGTGAAT 60.072 34.615 27.22 17.08 0.00 2.57
1618 6210 6.956202 TTGAAATTGGCCAAAATGTGAATT 57.044 29.167 24.71 6.56 0.00 2.17
1619 6211 8.512956 CATTGAAATTGGCCAAAATGTGAATTA 58.487 29.630 24.71 0.00 0.00 1.40
1620 6212 7.432350 TGAAATTGGCCAAAATGTGAATTAC 57.568 32.000 24.71 4.55 0.00 1.89
1621 6213 6.994496 TGAAATTGGCCAAAATGTGAATTACA 59.006 30.769 24.71 6.95 44.87 2.41
1622 6214 7.172875 TGAAATTGGCCAAAATGTGAATTACAG 59.827 33.333 24.71 0.00 43.80 2.74
1623 6215 5.543507 TTGGCCAAAATGTGAATTACAGT 57.456 34.783 17.98 0.00 43.80 3.55
1624 6216 5.132897 TGGCCAAAATGTGAATTACAGTC 57.867 39.130 0.61 0.00 43.80 3.51
1625 6217 4.832266 TGGCCAAAATGTGAATTACAGTCT 59.168 37.500 0.61 0.00 43.80 3.24
1626 6218 6.007076 TGGCCAAAATGTGAATTACAGTCTA 58.993 36.000 0.61 0.00 43.80 2.59
1627 6219 6.663093 TGGCCAAAATGTGAATTACAGTCTAT 59.337 34.615 0.61 0.00 43.80 1.98
1628 6220 7.178274 TGGCCAAAATGTGAATTACAGTCTATT 59.822 33.333 0.61 0.00 43.80 1.73
1629 6221 8.682710 GGCCAAAATGTGAATTACAGTCTATTA 58.317 33.333 0.00 0.00 43.80 0.98
1630 6222 9.503427 GCCAAAATGTGAATTACAGTCTATTAC 57.497 33.333 0.00 0.00 43.80 1.89
1696 6288 4.648651 GGTACGTCATATAAATTGCCCCT 58.351 43.478 0.00 0.00 0.00 4.79
1703 6295 7.994334 ACGTCATATAAATTGCCCCTAAAGTTA 59.006 33.333 0.00 0.00 0.00 2.24
1704 6296 8.842280 CGTCATATAAATTGCCCCTAAAGTTAA 58.158 33.333 0.00 0.00 0.00 2.01
1744 6338 4.340617 TGCCCCTATAAGTGACCAAAAAG 58.659 43.478 0.00 0.00 0.00 2.27
1766 6360 1.963515 GTTTCACACAGGGCAATTCCT 59.036 47.619 0.00 0.00 37.71 3.36
1767 6361 3.153919 GTTTCACACAGGGCAATTCCTA 58.846 45.455 0.00 0.00 34.92 2.94
1769 6363 1.985159 TCACACAGGGCAATTCCTAGT 59.015 47.619 0.00 0.00 34.92 2.57
1773 6367 4.040755 ACACAGGGCAATTCCTAGTCTAT 58.959 43.478 0.00 0.00 34.92 1.98
1778 6372 2.224305 GGCAATTCCTAGTCTATGCCGT 60.224 50.000 5.82 0.00 43.26 5.68
1784 6378 1.399714 CTAGTCTATGCCGTCCCACA 58.600 55.000 0.00 0.00 0.00 4.17
1785 6379 1.067212 CTAGTCTATGCCGTCCCACAC 59.933 57.143 0.00 0.00 0.00 3.82
1793 6387 2.656069 CCGTCCCACACAGTAGGGG 61.656 68.421 9.81 6.42 45.51 4.79
1795 6389 1.477685 CGTCCCACACAGTAGGGGTT 61.478 60.000 9.81 0.00 45.51 4.11
1826 6420 0.694771 ACTCTGCATGCTGGGAGAAA 59.305 50.000 28.92 6.36 34.69 2.52
1832 6426 0.109597 CATGCTGGGAGAAAACGCAC 60.110 55.000 0.00 0.00 32.94 5.34
1845 6439 4.622456 CGCACCACACCCGTTTGC 62.622 66.667 0.00 0.00 0.00 3.68
1846 6440 3.216292 GCACCACACCCGTTTGCT 61.216 61.111 0.00 0.00 31.44 3.91
1847 6441 2.721231 CACCACACCCGTTTGCTG 59.279 61.111 0.00 0.00 0.00 4.41
1875 6469 4.419939 GCGGGCGGCCTCTTTTTG 62.420 66.667 27.04 9.54 34.80 2.44
2044 6648 8.939586 AATGTTCGCATATTCAAAAGATATCG 57.060 30.769 0.00 0.00 36.70 2.92
2134 6761 9.644993 GTTAATGAAATTTAACAAAGTGTTGCC 57.355 29.630 3.90 0.00 38.29 4.52
2135 6762 7.856145 AATGAAATTTAACAAAGTGTTGCCA 57.144 28.000 3.90 0.00 41.30 4.92
2136 6763 7.856145 ATGAAATTTAACAAAGTGTTGCCAA 57.144 28.000 3.90 0.00 41.30 4.52
2137 6764 7.672983 TGAAATTTAACAAAGTGTTGCCAAA 57.327 28.000 3.90 0.00 41.30 3.28
2138 6765 8.099364 TGAAATTTAACAAAGTGTTGCCAAAA 57.901 26.923 3.90 0.00 41.30 2.44
2139 6766 8.734386 TGAAATTTAACAAAGTGTTGCCAAAAT 58.266 25.926 3.90 0.00 41.30 1.82
2140 6767 8.908172 AAATTTAACAAAGTGTTGCCAAAATG 57.092 26.923 3.90 0.00 41.30 2.32
2141 6768 7.622893 ATTTAACAAAGTGTTGCCAAAATGT 57.377 28.000 3.90 0.00 41.30 2.71
2142 6769 7.440523 TTTAACAAAGTGTTGCCAAAATGTT 57.559 28.000 3.90 0.00 41.30 2.71
2143 6770 8.547967 TTTAACAAAGTGTTGCCAAAATGTTA 57.452 26.923 3.90 0.00 41.30 2.41
2144 6771 8.723942 TTAACAAAGTGTTGCCAAAATGTTAT 57.276 26.923 3.90 0.00 41.30 1.89
2145 6772 6.843069 ACAAAGTGTTGCCAAAATGTTATC 57.157 33.333 0.00 0.00 38.39 1.75
2146 6773 5.461737 ACAAAGTGTTGCCAAAATGTTATCG 59.538 36.000 0.00 0.00 38.39 2.92
2147 6774 4.173036 AGTGTTGCCAAAATGTTATCGG 57.827 40.909 0.00 0.00 0.00 4.18
2148 6775 3.572255 AGTGTTGCCAAAATGTTATCGGT 59.428 39.130 0.00 0.00 0.00 4.69
2149 6776 3.672867 GTGTTGCCAAAATGTTATCGGTG 59.327 43.478 0.00 0.00 0.00 4.94
2150 6777 3.570125 TGTTGCCAAAATGTTATCGGTGA 59.430 39.130 0.00 0.00 0.00 4.02
2151 6778 4.219507 TGTTGCCAAAATGTTATCGGTGAT 59.780 37.500 0.00 0.00 0.00 3.06
2152 6779 4.368874 TGCCAAAATGTTATCGGTGATG 57.631 40.909 0.00 0.00 0.00 3.07
2153 6780 3.115554 GCCAAAATGTTATCGGTGATGC 58.884 45.455 0.00 0.00 0.00 3.91
2154 6781 3.428725 GCCAAAATGTTATCGGTGATGCA 60.429 43.478 0.00 0.00 0.00 3.96
2155 6782 4.353737 CCAAAATGTTATCGGTGATGCAG 58.646 43.478 0.00 0.00 0.00 4.41
2156 6783 3.698029 AAATGTTATCGGTGATGCAGC 57.302 42.857 0.00 0.00 0.00 5.25
2157 6784 2.330440 ATGTTATCGGTGATGCAGCA 57.670 45.000 0.00 0.00 0.00 4.41
2158 6785 2.106477 TGTTATCGGTGATGCAGCAA 57.894 45.000 6.05 0.00 0.00 3.91
2159 6786 2.431454 TGTTATCGGTGATGCAGCAAA 58.569 42.857 6.05 0.00 0.00 3.68
2160 6787 2.816672 TGTTATCGGTGATGCAGCAAAA 59.183 40.909 6.05 0.00 0.00 2.44
2161 6788 3.443329 TGTTATCGGTGATGCAGCAAAAT 59.557 39.130 6.05 3.07 0.00 1.82
2162 6789 2.857592 ATCGGTGATGCAGCAAAATC 57.142 45.000 6.05 0.00 0.00 2.17
2163 6790 1.825090 TCGGTGATGCAGCAAAATCT 58.175 45.000 6.05 0.00 0.00 2.40
2164 6791 2.161855 TCGGTGATGCAGCAAAATCTT 58.838 42.857 6.05 0.00 0.00 2.40
2165 6792 2.095110 TCGGTGATGCAGCAAAATCTTG 60.095 45.455 6.05 0.00 35.49 3.02
2166 6793 2.352030 CGGTGATGCAGCAAAATCTTGT 60.352 45.455 6.05 0.00 34.79 3.16
2167 6794 3.119884 CGGTGATGCAGCAAAATCTTGTA 60.120 43.478 6.05 0.00 34.79 2.41
2168 6795 4.615682 CGGTGATGCAGCAAAATCTTGTAA 60.616 41.667 6.05 0.00 34.79 2.41
2169 6796 5.413499 GGTGATGCAGCAAAATCTTGTAAT 58.587 37.500 6.05 0.00 34.79 1.89
2170 6797 5.870978 GGTGATGCAGCAAAATCTTGTAATT 59.129 36.000 6.05 0.00 34.79 1.40
2171 6798 6.369615 GGTGATGCAGCAAAATCTTGTAATTT 59.630 34.615 6.05 0.00 34.79 1.82
2172 6799 7.095102 GGTGATGCAGCAAAATCTTGTAATTTT 60.095 33.333 6.05 0.00 38.95 1.82
2173 6800 8.284693 GTGATGCAGCAAAATCTTGTAATTTTT 58.715 29.630 6.05 0.00 36.86 1.94
2174 6801 9.486497 TGATGCAGCAAAATCTTGTAATTTTTA 57.514 25.926 0.00 0.00 36.86 1.52
2251 6878 9.820725 TGGGAAATCAAAACATATTCATGATTC 57.179 29.630 0.00 0.00 39.19 2.52
2316 6944 7.721286 TCAAAATGTTCGCCAAAATGTTATT 57.279 28.000 0.00 0.00 0.00 1.40
2341 6969 3.991121 TCATGCAGCAAAATGTTGTCATG 59.009 39.130 0.00 15.47 40.53 3.07
2342 6970 3.455990 TGCAGCAAAATGTTGTCATGT 57.544 38.095 0.00 0.00 37.06 3.21
2343 6971 3.382855 TGCAGCAAAATGTTGTCATGTC 58.617 40.909 0.00 0.00 37.06 3.06
2344 6972 2.733026 GCAGCAAAATGTTGTCATGTCC 59.267 45.455 0.00 0.00 37.06 4.02
2345 6973 3.799574 GCAGCAAAATGTTGTCATGTCCA 60.800 43.478 0.00 0.00 37.06 4.02
2346 6974 4.562082 CAGCAAAATGTTGTCATGTCCAT 58.438 39.130 0.00 0.00 37.06 3.41
2347 6975 4.992319 CAGCAAAATGTTGTCATGTCCATT 59.008 37.500 0.00 0.00 37.06 3.16
2348 6976 4.992319 AGCAAAATGTTGTCATGTCCATTG 59.008 37.500 0.00 0.00 37.06 2.82
2349 6977 4.152759 GCAAAATGTTGTCATGTCCATTGG 59.847 41.667 0.00 0.00 37.06 3.16
2350 6978 5.539979 CAAAATGTTGTCATGTCCATTGGA 58.460 37.500 0.00 0.00 34.19 3.53
2351 6979 5.395682 AAATGTTGTCATGTCCATTGGAG 57.604 39.130 5.39 0.00 34.19 3.86
2352 6980 3.786368 TGTTGTCATGTCCATTGGAGA 57.214 42.857 5.39 5.09 29.39 3.71
2353 6981 4.305539 TGTTGTCATGTCCATTGGAGAT 57.694 40.909 9.48 9.48 36.04 2.75
2354 6982 4.665451 TGTTGTCATGTCCATTGGAGATT 58.335 39.130 12.46 0.00 33.19 2.40
2355 6983 4.701651 TGTTGTCATGTCCATTGGAGATTC 59.298 41.667 12.46 9.49 33.19 2.52
2356 6984 4.849813 TGTCATGTCCATTGGAGATTCT 57.150 40.909 12.46 0.00 33.19 2.40
2357 6985 4.520179 TGTCATGTCCATTGGAGATTCTG 58.480 43.478 12.46 4.30 33.19 3.02
2358 6986 4.225717 TGTCATGTCCATTGGAGATTCTGA 59.774 41.667 12.46 6.57 33.19 3.27
2359 6987 5.104235 TGTCATGTCCATTGGAGATTCTGAT 60.104 40.000 12.46 0.00 33.19 2.90
2360 6988 5.826737 GTCATGTCCATTGGAGATTCTGATT 59.173 40.000 12.46 0.00 33.19 2.57
2361 6989 6.320672 GTCATGTCCATTGGAGATTCTGATTT 59.679 38.462 12.46 0.00 33.19 2.17
2362 6990 6.893554 TCATGTCCATTGGAGATTCTGATTTT 59.106 34.615 12.46 0.00 33.19 1.82
2363 6991 7.398047 TCATGTCCATTGGAGATTCTGATTTTT 59.602 33.333 12.46 0.00 33.19 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
46 47 9.883142 AACACCAATTCATTCTTTCTTACAAAA 57.117 25.926 0.00 0.00 0.00 2.44
107 108 7.946207 AGTTTTGTCCAAATTTTGTGGTTTTT 58.054 26.923 8.26 0.00 37.43 1.94
108 109 7.517614 AGTTTTGTCCAAATTTTGTGGTTTT 57.482 28.000 8.26 0.00 37.43 2.43
109 110 7.517614 AAGTTTTGTCCAAATTTTGTGGTTT 57.482 28.000 8.26 0.00 37.43 3.27
110 111 7.661847 TGTAAGTTTTGTCCAAATTTTGTGGTT 59.338 29.630 8.26 0.00 37.43 3.67
111 112 7.118535 GTGTAAGTTTTGTCCAAATTTTGTGGT 59.881 33.333 8.26 0.00 37.43 4.16
112 113 7.118390 TGTGTAAGTTTTGTCCAAATTTTGTGG 59.882 33.333 8.26 0.00 37.51 4.17
113 114 8.023050 TGTGTAAGTTTTGTCCAAATTTTGTG 57.977 30.769 8.26 0.73 0.00 3.33
114 115 8.091449 TCTGTGTAAGTTTTGTCCAAATTTTGT 58.909 29.630 8.26 0.00 0.00 2.83
115 116 8.472683 TCTGTGTAAGTTTTGTCCAAATTTTG 57.527 30.769 1.99 1.99 0.00 2.44
116 117 9.495572 TTTCTGTGTAAGTTTTGTCCAAATTTT 57.504 25.926 0.00 0.00 0.00 1.82
117 118 9.665719 ATTTCTGTGTAAGTTTTGTCCAAATTT 57.334 25.926 0.00 0.00 0.00 1.82
118 119 9.665719 AATTTCTGTGTAAGTTTTGTCCAAATT 57.334 25.926 0.00 0.00 0.00 1.82
119 120 9.097257 CAATTTCTGTGTAAGTTTTGTCCAAAT 57.903 29.630 0.00 0.00 0.00 2.32
120 121 7.064016 GCAATTTCTGTGTAAGTTTTGTCCAAA 59.936 33.333 0.00 0.00 0.00 3.28
121 122 6.533367 GCAATTTCTGTGTAAGTTTTGTCCAA 59.467 34.615 0.00 0.00 0.00 3.53
122 123 6.039616 GCAATTTCTGTGTAAGTTTTGTCCA 58.960 36.000 0.00 0.00 0.00 4.02
123 124 5.173131 CGCAATTTCTGTGTAAGTTTTGTCC 59.827 40.000 0.00 0.00 0.00 4.02
124 125 5.331532 GCGCAATTTCTGTGTAAGTTTTGTC 60.332 40.000 0.30 0.00 37.88 3.18
125 126 4.502645 GCGCAATTTCTGTGTAAGTTTTGT 59.497 37.500 0.30 0.00 37.88 2.83
126 127 4.085107 GGCGCAATTTCTGTGTAAGTTTTG 60.085 41.667 10.83 0.00 37.88 2.44
127 128 4.048504 GGCGCAATTTCTGTGTAAGTTTT 58.951 39.130 10.83 0.00 37.88 2.43
128 129 3.317993 AGGCGCAATTTCTGTGTAAGTTT 59.682 39.130 10.83 0.00 37.88 2.66
129 130 2.884639 AGGCGCAATTTCTGTGTAAGTT 59.115 40.909 10.83 0.00 37.88 2.66
130 131 2.504367 AGGCGCAATTTCTGTGTAAGT 58.496 42.857 10.83 0.00 37.88 2.24
131 132 3.559238 AAGGCGCAATTTCTGTGTAAG 57.441 42.857 10.83 0.00 37.88 2.34
132 133 4.314740 AAAAGGCGCAATTTCTGTGTAA 57.685 36.364 10.83 0.00 37.88 2.41
133 134 4.314740 AAAAAGGCGCAATTTCTGTGTA 57.685 36.364 10.83 0.00 37.88 2.90
134 135 2.888834 AAAAGGCGCAATTTCTGTGT 57.111 40.000 10.83 0.00 37.88 3.72
135 136 4.047822 TGTAAAAAGGCGCAATTTCTGTG 58.952 39.130 10.83 0.00 38.67 3.66
136 137 4.314740 TGTAAAAAGGCGCAATTTCTGT 57.685 36.364 10.83 2.00 0.00 3.41
137 138 5.844301 ATTGTAAAAAGGCGCAATTTCTG 57.156 34.783 10.83 0.00 0.00 3.02
138 139 9.816354 AATATATTGTAAAAAGGCGCAATTTCT 57.184 25.926 10.83 0.00 0.00 2.52
142 143 9.893305 GTCTAATATATTGTAAAAAGGCGCAAT 57.107 29.630 10.83 0.00 0.00 3.56
143 144 8.894731 TGTCTAATATATTGTAAAAAGGCGCAA 58.105 29.630 10.83 0.00 0.00 4.85
144 145 8.439993 TGTCTAATATATTGTAAAAAGGCGCA 57.560 30.769 10.83 0.00 0.00 6.09
145 146 9.329913 CATGTCTAATATATTGTAAAAAGGCGC 57.670 33.333 8.28 0.00 0.00 6.53
159 160 8.812972 GGACTCAATGGGTACATGTCTAATATA 58.187 37.037 0.00 0.00 37.40 0.86
160 161 7.292356 TGGACTCAATGGGTACATGTCTAATAT 59.708 37.037 0.00 0.00 37.40 1.28
161 162 6.613679 TGGACTCAATGGGTACATGTCTAATA 59.386 38.462 0.00 0.00 37.40 0.98
162 163 5.428457 TGGACTCAATGGGTACATGTCTAAT 59.572 40.000 0.00 0.00 37.40 1.73
163 164 4.780554 TGGACTCAATGGGTACATGTCTAA 59.219 41.667 0.00 0.00 37.40 2.10
164 165 4.161565 GTGGACTCAATGGGTACATGTCTA 59.838 45.833 0.00 0.00 37.40 2.59
165 166 3.055094 GTGGACTCAATGGGTACATGTCT 60.055 47.826 0.00 0.00 37.40 3.41
166 167 3.270877 GTGGACTCAATGGGTACATGTC 58.729 50.000 0.00 0.00 37.40 3.06
167 168 2.354704 CGTGGACTCAATGGGTACATGT 60.355 50.000 9.52 2.69 37.40 3.21
168 169 2.279741 CGTGGACTCAATGGGTACATG 58.720 52.381 0.00 1.40 37.40 3.21
169 170 1.209504 CCGTGGACTCAATGGGTACAT 59.790 52.381 0.00 0.00 39.54 2.29
170 171 0.611200 CCGTGGACTCAATGGGTACA 59.389 55.000 0.00 0.00 0.00 2.90
171 172 0.899720 TCCGTGGACTCAATGGGTAC 59.100 55.000 0.00 0.00 0.00 3.34
172 173 1.191535 CTCCGTGGACTCAATGGGTA 58.808 55.000 0.00 0.00 0.00 3.69
173 174 1.983224 CTCCGTGGACTCAATGGGT 59.017 57.895 0.00 0.00 0.00 4.51
174 175 1.450312 GCTCCGTGGACTCAATGGG 60.450 63.158 0.00 0.00 0.00 4.00
175 176 0.107508 ATGCTCCGTGGACTCAATGG 60.108 55.000 0.00 0.00 0.00 3.16
176 177 1.742761 AATGCTCCGTGGACTCAATG 58.257 50.000 0.00 0.00 0.00 2.82
177 178 2.496899 AAATGCTCCGTGGACTCAAT 57.503 45.000 0.00 0.00 0.00 2.57
178 179 2.151202 GAAAATGCTCCGTGGACTCAA 58.849 47.619 0.00 0.00 0.00 3.02
179 180 1.071542 TGAAAATGCTCCGTGGACTCA 59.928 47.619 0.00 0.00 0.00 3.41
180 181 1.734465 CTGAAAATGCTCCGTGGACTC 59.266 52.381 0.00 0.00 0.00 3.36
181 182 1.072331 ACTGAAAATGCTCCGTGGACT 59.928 47.619 0.00 0.00 0.00 3.85
182 183 1.464997 GACTGAAAATGCTCCGTGGAC 59.535 52.381 0.00 0.00 0.00 4.02
183 184 1.071542 TGACTGAAAATGCTCCGTGGA 59.928 47.619 0.00 0.00 0.00 4.02
184 185 1.466167 CTGACTGAAAATGCTCCGTGG 59.534 52.381 0.00 0.00 0.00 4.94
185 186 1.466167 CCTGACTGAAAATGCTCCGTG 59.534 52.381 0.00 0.00 0.00 4.94
186 187 1.813513 CCTGACTGAAAATGCTCCGT 58.186 50.000 0.00 0.00 0.00 4.69
187 188 0.449388 GCCTGACTGAAAATGCTCCG 59.551 55.000 0.00 0.00 0.00 4.63
188 189 0.813821 GGCCTGACTGAAAATGCTCC 59.186 55.000 0.00 0.00 0.00 4.70
189 190 1.471684 CTGGCCTGACTGAAAATGCTC 59.528 52.381 3.32 0.00 0.00 4.26
190 191 1.074405 TCTGGCCTGACTGAAAATGCT 59.926 47.619 8.48 0.00 0.00 3.79
191 192 1.200948 GTCTGGCCTGACTGAAAATGC 59.799 52.381 29.78 5.55 34.39 3.56
192 193 2.746362 GAGTCTGGCCTGACTGAAAATG 59.254 50.000 40.27 2.73 46.11 2.32
193 194 2.373169 TGAGTCTGGCCTGACTGAAAAT 59.627 45.455 40.27 21.75 46.11 1.82
194 195 1.768275 TGAGTCTGGCCTGACTGAAAA 59.232 47.619 40.27 23.63 46.11 2.29
195 196 1.070758 GTGAGTCTGGCCTGACTGAAA 59.929 52.381 40.27 25.71 46.11 2.69
196 197 0.681733 GTGAGTCTGGCCTGACTGAA 59.318 55.000 40.27 27.83 46.11 3.02
197 198 0.469892 TGTGAGTCTGGCCTGACTGA 60.470 55.000 40.27 32.68 46.11 3.41
198 199 0.394192 TTGTGAGTCTGGCCTGACTG 59.606 55.000 40.27 11.31 46.11 3.51
200 201 1.604278 GTTTTGTGAGTCTGGCCTGAC 59.396 52.381 29.89 29.89 37.23 3.51
201 202 1.476833 GGTTTTGTGAGTCTGGCCTGA 60.477 52.381 8.48 8.48 0.00 3.86
202 203 0.954452 GGTTTTGTGAGTCTGGCCTG 59.046 55.000 3.32 2.92 0.00 4.85
203 204 0.535102 CGGTTTTGTGAGTCTGGCCT 60.535 55.000 3.32 0.00 0.00 5.19
204 205 1.949257 CGGTTTTGTGAGTCTGGCC 59.051 57.895 0.00 0.00 0.00 5.36
205 206 1.166531 AGCGGTTTTGTGAGTCTGGC 61.167 55.000 0.00 0.00 0.00 4.85
206 207 2.163818 TAGCGGTTTTGTGAGTCTGG 57.836 50.000 0.00 0.00 0.00 3.86
207 208 3.667960 GCAATAGCGGTTTTGTGAGTCTG 60.668 47.826 17.08 0.00 0.00 3.51
208 209 2.484264 GCAATAGCGGTTTTGTGAGTCT 59.516 45.455 17.08 0.00 0.00 3.24
209 210 2.414161 GGCAATAGCGGTTTTGTGAGTC 60.414 50.000 17.08 2.63 43.41 3.36
210 211 1.539827 GGCAATAGCGGTTTTGTGAGT 59.460 47.619 17.08 0.00 43.41 3.41
211 212 1.135402 GGGCAATAGCGGTTTTGTGAG 60.135 52.381 17.08 0.00 43.41 3.51
212 213 0.885196 GGGCAATAGCGGTTTTGTGA 59.115 50.000 17.08 0.00 43.41 3.58
213 214 0.887933 AGGGCAATAGCGGTTTTGTG 59.112 50.000 17.08 1.72 43.41 3.33
214 215 1.173913 GAGGGCAATAGCGGTTTTGT 58.826 50.000 17.08 0.18 43.41 2.83
215 216 1.133025 CTGAGGGCAATAGCGGTTTTG 59.867 52.381 12.61 12.61 43.41 2.44
216 217 1.463674 CTGAGGGCAATAGCGGTTTT 58.536 50.000 0.00 0.00 43.41 2.43
217 218 1.032114 GCTGAGGGCAATAGCGGTTT 61.032 55.000 0.00 0.00 43.41 3.27
218 219 1.452108 GCTGAGGGCAATAGCGGTT 60.452 57.895 0.00 0.00 43.41 4.44
219 220 2.190578 GCTGAGGGCAATAGCGGT 59.809 61.111 0.00 0.00 43.41 5.68
222 223 2.203126 AGCGCTGAGGGCAATAGC 60.203 61.111 23.60 0.00 44.06 2.97
223 224 0.879400 CTGAGCGCTGAGGGCAATAG 60.879 60.000 23.60 13.59 44.06 1.73
224 225 1.144716 CTGAGCGCTGAGGGCAATA 59.855 57.895 23.60 8.08 44.06 1.90
225 226 1.980784 ATCTGAGCGCTGAGGGCAAT 61.981 55.000 23.92 7.01 44.06 3.56
226 227 2.189191 AATCTGAGCGCTGAGGGCAA 62.189 55.000 23.92 4.62 44.06 4.52
227 228 2.189191 AAATCTGAGCGCTGAGGGCA 62.189 55.000 23.92 9.83 44.06 5.36
228 229 1.028868 AAAATCTGAGCGCTGAGGGC 61.029 55.000 23.92 14.15 41.91 5.19
229 230 1.399791 GAAAAATCTGAGCGCTGAGGG 59.600 52.381 23.92 0.00 0.00 4.30
230 231 1.061711 CGAAAAATCTGAGCGCTGAGG 59.938 52.381 23.92 9.16 0.00 3.86
231 232 1.528603 GCGAAAAATCTGAGCGCTGAG 60.529 52.381 18.48 18.55 43.85 3.35
232 233 0.443869 GCGAAAAATCTGAGCGCTGA 59.556 50.000 18.48 5.01 43.85 4.26
233 234 0.522076 GGCGAAAAATCTGAGCGCTG 60.522 55.000 18.48 0.00 46.17 5.18
234 235 1.648467 GGGCGAAAAATCTGAGCGCT 61.648 55.000 11.27 11.27 46.17 5.92
235 236 1.226407 GGGCGAAAAATCTGAGCGC 60.226 57.895 0.00 0.00 46.20 5.92
236 237 1.060937 CGGGCGAAAAATCTGAGCG 59.939 57.895 0.00 0.00 0.00 5.03
237 238 1.429423 CCGGGCGAAAAATCTGAGC 59.571 57.895 0.00 0.00 0.00 4.26
238 239 1.429423 GCCGGGCGAAAAATCTGAG 59.571 57.895 1.81 0.00 0.00 3.35
239 240 3.585856 GCCGGGCGAAAAATCTGA 58.414 55.556 1.81 0.00 0.00 3.27
250 251 0.952010 TCTTCAAGTTTACGCCGGGC 60.952 55.000 9.54 9.54 0.00 6.13
251 252 1.664151 GATCTTCAAGTTTACGCCGGG 59.336 52.381 2.18 0.00 0.00 5.73
252 253 2.348666 CAGATCTTCAAGTTTACGCCGG 59.651 50.000 0.00 0.00 0.00 6.13
253 254 2.348666 CCAGATCTTCAAGTTTACGCCG 59.651 50.000 0.00 0.00 0.00 6.46
254 255 2.096013 GCCAGATCTTCAAGTTTACGCC 59.904 50.000 0.00 0.00 0.00 5.68
255 256 2.742053 TGCCAGATCTTCAAGTTTACGC 59.258 45.455 0.00 0.00 0.00 4.42
256 257 5.327091 CAATGCCAGATCTTCAAGTTTACG 58.673 41.667 0.00 0.00 0.00 3.18
257 258 5.644644 CCAATGCCAGATCTTCAAGTTTAC 58.355 41.667 0.00 0.00 0.00 2.01
258 259 4.158394 GCCAATGCCAGATCTTCAAGTTTA 59.842 41.667 0.00 0.00 0.00 2.01
259 260 3.056322 GCCAATGCCAGATCTTCAAGTTT 60.056 43.478 0.00 0.00 0.00 2.66
260 261 2.494870 GCCAATGCCAGATCTTCAAGTT 59.505 45.455 0.00 0.00 0.00 2.66
261 262 2.097825 GCCAATGCCAGATCTTCAAGT 58.902 47.619 0.00 0.00 0.00 3.16
262 263 2.097036 TGCCAATGCCAGATCTTCAAG 58.903 47.619 0.00 0.00 36.33 3.02
263 264 1.820519 GTGCCAATGCCAGATCTTCAA 59.179 47.619 0.00 0.00 36.33 2.69
264 265 1.005097 AGTGCCAATGCCAGATCTTCA 59.995 47.619 0.00 0.00 36.33 3.02
265 266 1.760192 AGTGCCAATGCCAGATCTTC 58.240 50.000 0.00 0.00 36.33 2.87
266 267 3.370840 TTAGTGCCAATGCCAGATCTT 57.629 42.857 0.00 0.00 36.33 2.40
267 268 3.370840 TTTAGTGCCAATGCCAGATCT 57.629 42.857 0.00 0.00 36.33 2.75
268 269 4.660789 ATTTTAGTGCCAATGCCAGATC 57.339 40.909 0.00 0.00 36.33 2.75
273 274 5.906073 ACATCTAATTTTAGTGCCAATGCC 58.094 37.500 0.00 0.00 36.33 4.40
303 304 3.863424 CACATATGTCACGTGGTCCTAAC 59.137 47.826 17.00 5.75 0.00 2.34
304 305 3.118920 CCACATATGTCACGTGGTCCTAA 60.119 47.826 17.00 0.00 44.27 2.69
305 306 2.429250 CCACATATGTCACGTGGTCCTA 59.571 50.000 17.00 7.32 44.27 2.94
307 308 1.651987 CCACATATGTCACGTGGTCC 58.348 55.000 17.00 4.78 44.27 4.46
311 312 3.521560 AGCTTACCACATATGTCACGTG 58.478 45.455 9.94 9.94 0.00 4.49
312 313 3.887621 AGCTTACCACATATGTCACGT 57.112 42.857 5.07 5.26 0.00 4.49
313 314 4.923871 GGATAGCTTACCACATATGTCACG 59.076 45.833 5.07 0.00 0.00 4.35
314 315 5.221641 TGGGATAGCTTACCACATATGTCAC 60.222 44.000 5.07 0.00 0.00 3.67
315 316 4.904853 TGGGATAGCTTACCACATATGTCA 59.095 41.667 5.07 0.00 0.00 3.58
316 317 5.483685 TGGGATAGCTTACCACATATGTC 57.516 43.478 5.07 0.00 0.00 3.06
317 318 5.131977 TGTTGGGATAGCTTACCACATATGT 59.868 40.000 1.41 1.41 33.20 2.29
318 319 5.620206 TGTTGGGATAGCTTACCACATATG 58.380 41.667 0.00 0.00 33.20 1.78
319 320 5.904984 TGTTGGGATAGCTTACCACATAT 57.095 39.130 10.30 0.00 33.20 1.78
320 321 5.702065 TTGTTGGGATAGCTTACCACATA 57.298 39.130 10.30 0.00 33.20 2.29
321 322 4.584638 TTGTTGGGATAGCTTACCACAT 57.415 40.909 10.30 0.00 33.20 3.21
322 323 4.584638 ATTGTTGGGATAGCTTACCACA 57.415 40.909 10.30 5.05 33.20 4.17
323 324 4.947388 TGAATTGTTGGGATAGCTTACCAC 59.053 41.667 10.30 2.90 33.20 4.16
324 325 5.186256 TGAATTGTTGGGATAGCTTACCA 57.814 39.130 10.30 5.58 0.00 3.25
325 326 6.524101 TTTGAATTGTTGGGATAGCTTACC 57.476 37.500 0.00 0.00 0.00 2.85
351 352 5.123936 GCCTTATCCCGACATCTAGTTTTT 58.876 41.667 0.00 0.00 0.00 1.94
352 353 4.163458 TGCCTTATCCCGACATCTAGTTTT 59.837 41.667 0.00 0.00 0.00 2.43
353 354 3.709653 TGCCTTATCCCGACATCTAGTTT 59.290 43.478 0.00 0.00 0.00 2.66
354 355 3.305720 TGCCTTATCCCGACATCTAGTT 58.694 45.455 0.00 0.00 0.00 2.24
355 356 2.958818 TGCCTTATCCCGACATCTAGT 58.041 47.619 0.00 0.00 0.00 2.57
356 357 3.069586 TGTTGCCTTATCCCGACATCTAG 59.930 47.826 0.00 0.00 0.00 2.43
357 358 3.035363 TGTTGCCTTATCCCGACATCTA 58.965 45.455 0.00 0.00 0.00 1.98
358 359 1.837439 TGTTGCCTTATCCCGACATCT 59.163 47.619 0.00 0.00 0.00 2.90
359 360 1.940613 GTGTTGCCTTATCCCGACATC 59.059 52.381 0.00 0.00 0.00 3.06
360 361 1.408266 GGTGTTGCCTTATCCCGACAT 60.408 52.381 0.00 0.00 0.00 3.06
361 362 0.035820 GGTGTTGCCTTATCCCGACA 60.036 55.000 0.00 0.00 0.00 4.35
362 363 0.035820 TGGTGTTGCCTTATCCCGAC 60.036 55.000 0.00 0.00 38.35 4.79
363 364 0.916086 ATGGTGTTGCCTTATCCCGA 59.084 50.000 0.00 0.00 38.35 5.14
364 365 1.024271 CATGGTGTTGCCTTATCCCG 58.976 55.000 0.00 0.00 38.35 5.14
365 366 2.143876 ACATGGTGTTGCCTTATCCC 57.856 50.000 0.00 0.00 38.35 3.85
366 367 3.088532 TGAACATGGTGTTGCCTTATCC 58.911 45.455 0.00 0.00 41.28 2.59
367 368 4.782019 TTGAACATGGTGTTGCCTTATC 57.218 40.909 0.00 0.00 41.28 1.75
368 369 5.070313 ACTTTTGAACATGGTGTTGCCTTAT 59.930 36.000 0.00 0.00 41.28 1.73
369 370 4.404073 ACTTTTGAACATGGTGTTGCCTTA 59.596 37.500 0.00 0.00 41.28 2.69
370 371 3.197549 ACTTTTGAACATGGTGTTGCCTT 59.802 39.130 0.00 0.00 41.28 4.35
371 372 2.765699 ACTTTTGAACATGGTGTTGCCT 59.234 40.909 0.00 0.00 41.28 4.75
372 373 2.865551 CACTTTTGAACATGGTGTTGCC 59.134 45.455 0.00 0.00 41.28 4.52
373 374 2.865551 CCACTTTTGAACATGGTGTTGC 59.134 45.455 0.00 0.00 41.28 4.17
376 377 4.023291 ACTTCCACTTTTGAACATGGTGT 58.977 39.130 0.00 0.00 33.67 4.16
453 2129 7.235079 TGTTGGTTTATTAATGGTGAGAAGGA 58.765 34.615 0.00 0.00 0.00 3.36
455 2131 9.927668 ATTTGTTGGTTTATTAATGGTGAGAAG 57.072 29.630 0.00 0.00 0.00 2.85
485 2161 3.662247 AAACTGTGACGGAAGGAGTAG 57.338 47.619 0.00 0.00 0.00 2.57
486 2162 4.401022 TCTAAACTGTGACGGAAGGAGTA 58.599 43.478 0.00 0.00 0.00 2.59
487 2163 3.228453 TCTAAACTGTGACGGAAGGAGT 58.772 45.455 0.00 0.00 0.00 3.85
488 2164 3.936372 TCTAAACTGTGACGGAAGGAG 57.064 47.619 0.00 0.00 0.00 3.69
490 2166 3.326747 CCTTCTAAACTGTGACGGAAGG 58.673 50.000 0.00 13.54 42.12 3.46
491 2167 2.737252 GCCTTCTAAACTGTGACGGAAG 59.263 50.000 0.00 0.00 0.00 3.46
492 2168 2.103432 TGCCTTCTAAACTGTGACGGAA 59.897 45.455 0.00 0.00 0.00 4.30
495 2171 2.476619 CTGTGCCTTCTAAACTGTGACG 59.523 50.000 0.00 0.00 0.00 4.35
496 2172 3.467803 ACTGTGCCTTCTAAACTGTGAC 58.532 45.455 0.00 0.00 0.00 3.67
497 2173 3.838244 ACTGTGCCTTCTAAACTGTGA 57.162 42.857 0.00 0.00 0.00 3.58
498 2174 6.371809 TTTAACTGTGCCTTCTAAACTGTG 57.628 37.500 0.00 0.00 0.00 3.66
500 2176 9.394477 GTAAATTTAACTGTGCCTTCTAAACTG 57.606 33.333 0.00 0.00 0.00 3.16
501 2177 8.287503 CGTAAATTTAACTGTGCCTTCTAAACT 58.712 33.333 0.00 0.00 0.00 2.66
502 2178 8.071967 ACGTAAATTTAACTGTGCCTTCTAAAC 58.928 33.333 0.00 0.00 0.00 2.01
503 2179 8.071368 CACGTAAATTTAACTGTGCCTTCTAAA 58.929 33.333 0.00 0.00 0.00 1.85
504 2180 7.227116 ACACGTAAATTTAACTGTGCCTTCTAA 59.773 33.333 18.88 0.00 0.00 2.10
505 2181 6.707161 ACACGTAAATTTAACTGTGCCTTCTA 59.293 34.615 18.88 0.00 0.00 2.10
506 2182 5.529800 ACACGTAAATTTAACTGTGCCTTCT 59.470 36.000 18.88 4.62 0.00 2.85
507 2183 5.623673 CACACGTAAATTTAACTGTGCCTTC 59.376 40.000 18.88 0.00 0.00 3.46
508 2184 5.066764 ACACACGTAAATTTAACTGTGCCTT 59.933 36.000 23.91 11.34 33.28 4.35
510 2186 4.851010 ACACACGTAAATTTAACTGTGCC 58.149 39.130 23.91 3.98 33.28 5.01
511 2187 6.799786 AAACACACGTAAATTTAACTGTGC 57.200 33.333 23.91 4.53 33.28 4.57
519 2377 9.228636 GTCTATTGTGAAAACACACGTAAATTT 57.771 29.630 2.48 0.00 42.86 1.82
526 2384 5.204833 CCTTGTCTATTGTGAAAACACACG 58.795 41.667 2.48 0.00 42.86 4.49
527 2385 6.131544 ACCTTGTCTATTGTGAAAACACAC 57.868 37.500 2.48 0.00 40.68 3.82
529 2387 9.233232 CTTAAACCTTGTCTATTGTGAAAACAC 57.767 33.333 0.00 0.00 0.00 3.32
531 2389 7.381408 GCCTTAAACCTTGTCTATTGTGAAAAC 59.619 37.037 0.00 0.00 0.00 2.43
536 2394 4.671766 GCGCCTTAAACCTTGTCTATTGTG 60.672 45.833 0.00 0.00 0.00 3.33
537 2395 3.439129 GCGCCTTAAACCTTGTCTATTGT 59.561 43.478 0.00 0.00 0.00 2.71
538 2396 3.438781 TGCGCCTTAAACCTTGTCTATTG 59.561 43.478 4.18 0.00 0.00 1.90
540 2398 3.343941 TGCGCCTTAAACCTTGTCTAT 57.656 42.857 4.18 0.00 0.00 1.98
545 2403 1.336702 TGCAATGCGCCTTAAACCTTG 60.337 47.619 4.18 0.00 41.33 3.61
546 2404 0.965439 TGCAATGCGCCTTAAACCTT 59.035 45.000 4.18 0.00 41.33 3.50
547 2405 1.185315 ATGCAATGCGCCTTAAACCT 58.815 45.000 4.18 0.00 41.33 3.50
548 2406 2.008752 AATGCAATGCGCCTTAAACC 57.991 45.000 4.18 0.00 41.33 3.27
550 2408 6.105333 AGAAATAAATGCAATGCGCCTTAAA 58.895 32.000 4.18 0.00 41.33 1.52
553 2411 4.127566 AGAAATAAATGCAATGCGCCTT 57.872 36.364 4.18 0.00 41.33 4.35
554 2412 3.806625 AGAAATAAATGCAATGCGCCT 57.193 38.095 4.18 0.00 41.33 5.52
556 2414 5.340667 GCTACTAGAAATAAATGCAATGCGC 59.659 40.000 0.00 0.00 42.89 6.09
557 2415 6.662616 AGCTACTAGAAATAAATGCAATGCG 58.337 36.000 0.00 0.00 0.00 4.73
569 2427 9.790344 TCGGACTACTAATTAGCTACTAGAAAT 57.210 33.333 12.54 0.00 0.00 2.17
570 2428 9.790344 ATCGGACTACTAATTAGCTACTAGAAA 57.210 33.333 12.54 0.00 0.00 2.52
573 2431 9.874205 ACTATCGGACTACTAATTAGCTACTAG 57.126 37.037 12.54 8.94 0.00 2.57
575 2433 9.651913 GTACTATCGGACTACTAATTAGCTACT 57.348 37.037 12.54 0.00 0.00 2.57
576 2434 9.651913 AGTACTATCGGACTACTAATTAGCTAC 57.348 37.037 12.54 2.32 0.00 3.58
589 2447 9.682465 TGCATATAGAAATAGTACTATCGGACT 57.318 33.333 15.72 13.59 32.57 3.85
592 2450 9.186323 GCATGCATATAGAAATAGTACTATCGG 57.814 37.037 15.72 1.90 32.57 4.18
593 2451 8.896826 CGCATGCATATAGAAATAGTACTATCG 58.103 37.037 19.57 6.22 32.57 2.92
594 2452 8.695284 GCGCATGCATATAGAAATAGTACTATC 58.305 37.037 19.57 5.67 42.15 2.08
595 2453 8.581057 GCGCATGCATATAGAAATAGTACTAT 57.419 34.615 19.57 9.71 42.15 2.12
596 2454 7.987268 GCGCATGCATATAGAAATAGTACTA 57.013 36.000 19.57 4.77 42.15 1.82
614 2680 0.728542 TAGCATTCACACTGCGCATG 59.271 50.000 12.24 14.27 44.38 4.06
615 2681 1.671979 ATAGCATTCACACTGCGCAT 58.328 45.000 12.24 0.00 44.38 4.73
616 2682 1.452110 AATAGCATTCACACTGCGCA 58.548 45.000 10.98 10.98 44.38 6.09
617 2683 2.549633 AAATAGCATTCACACTGCGC 57.450 45.000 0.00 0.00 44.38 6.09
635 2701 5.359194 TTGGTTGTGAAATGGGCTAAAAA 57.641 34.783 0.00 0.00 0.00 1.94
636 2702 5.559148 ATTGGTTGTGAAATGGGCTAAAA 57.441 34.783 0.00 0.00 0.00 1.52
637 2703 6.013379 TCTATTGGTTGTGAAATGGGCTAAA 58.987 36.000 0.00 0.00 0.00 1.85
641 2707 6.273071 GTTATCTATTGGTTGTGAAATGGGC 58.727 40.000 0.00 0.00 0.00 5.36
642 2708 6.379703 TGGTTATCTATTGGTTGTGAAATGGG 59.620 38.462 0.00 0.00 0.00 4.00
643 2709 7.257722 GTGGTTATCTATTGGTTGTGAAATGG 58.742 38.462 0.00 0.00 0.00 3.16
644 2710 7.122650 AGGTGGTTATCTATTGGTTGTGAAATG 59.877 37.037 0.00 0.00 0.00 2.32
649 2715 6.055588 CCTAGGTGGTTATCTATTGGTTGTG 58.944 44.000 0.00 0.00 0.00 3.33
666 3389 3.118223 GGAAATTCTCTGGGACCTAGGTG 60.118 52.174 22.10 4.66 0.00 4.00
670 3393 3.054361 GCTTGGAAATTCTCTGGGACCTA 60.054 47.826 0.00 0.00 0.00 3.08
671 3394 2.291217 GCTTGGAAATTCTCTGGGACCT 60.291 50.000 0.00 0.00 0.00 3.85
672 3395 2.095461 GCTTGGAAATTCTCTGGGACC 58.905 52.381 0.00 0.00 0.00 4.46
673 3396 1.740025 CGCTTGGAAATTCTCTGGGAC 59.260 52.381 0.00 0.00 0.00 4.46
676 3399 0.097674 CGCGCTTGGAAATTCTCTGG 59.902 55.000 5.56 0.00 0.00 3.86
678 3401 1.648467 GGCGCGCTTGGAAATTCTCT 61.648 55.000 32.29 0.00 0.00 3.10
679 3402 1.226407 GGCGCGCTTGGAAATTCTC 60.226 57.895 32.29 5.31 0.00 2.87
680 3403 1.244019 AAGGCGCGCTTGGAAATTCT 61.244 50.000 32.29 13.22 0.00 2.40
681 3404 0.798389 GAAGGCGCGCTTGGAAATTC 60.798 55.000 32.29 13.04 0.00 2.17
683 3406 0.392461 TAGAAGGCGCGCTTGGAAAT 60.392 50.000 32.29 7.73 0.00 2.17
690 3413 2.813908 CGGTTTAGAAGGCGCGCT 60.814 61.111 32.29 12.85 0.00 5.92
691 3414 3.116531 ACGGTTTAGAAGGCGCGC 61.117 61.111 25.94 25.94 0.00 6.86
692 3415 1.735198 TCACGGTTTAGAAGGCGCG 60.735 57.895 0.00 0.00 0.00 6.86
693 3416 1.785951 GTCACGGTTTAGAAGGCGC 59.214 57.895 0.00 0.00 0.00 6.53
694 3417 1.349259 CCGTCACGGTTTAGAAGGCG 61.349 60.000 8.54 0.00 42.73 5.52
695 3418 2.452767 CCGTCACGGTTTAGAAGGC 58.547 57.895 8.54 0.00 42.73 4.35
707 3430 1.102222 AGATCTACTCCCGCCGTCAC 61.102 60.000 0.00 0.00 0.00 3.67
710 3433 0.182061 TGTAGATCTACTCCCGCCGT 59.818 55.000 28.53 0.00 37.00 5.68
713 3436 5.241064 TGTTTATCTGTAGATCTACTCCCGC 59.759 44.000 28.53 15.27 37.00 6.13
714 3437 6.294065 GGTGTTTATCTGTAGATCTACTCCCG 60.294 46.154 28.53 16.37 37.00 5.14
715 3438 6.294065 CGGTGTTTATCTGTAGATCTACTCCC 60.294 46.154 28.53 15.15 37.00 4.30
716 3439 6.485984 TCGGTGTTTATCTGTAGATCTACTCC 59.514 42.308 28.53 14.43 37.00 3.85
718 3441 6.827251 TGTCGGTGTTTATCTGTAGATCTACT 59.173 38.462 28.53 14.64 37.00 2.57
719 3442 7.024340 TGTCGGTGTTTATCTGTAGATCTAC 57.976 40.000 23.53 23.53 36.05 2.59
775 5251 6.658849 TCTAATTTTAGTGCCAATGCTAGGA 58.341 36.000 0.00 0.00 38.71 2.94
776 5252 6.942532 TCTAATTTTAGTGCCAATGCTAGG 57.057 37.500 0.00 0.00 38.71 3.02
801 5277 7.811282 TGAAGATGGTTATGCCTTATCCTAAA 58.189 34.615 0.00 0.00 38.35 1.85
822 5298 6.851330 GTCTTGATTTACGTCCACTTTTGAAG 59.149 38.462 0.00 0.00 0.00 3.02
835 5311 7.285783 TCTTATCCAAACGTCTTGATTTACG 57.714 36.000 10.71 0.00 44.47 3.18
954 5439 7.306213 GTGACTTTCCTCCTAAGTAAAATTGC 58.694 38.462 0.00 0.00 36.04 3.56
957 5442 5.642491 GCGTGACTTTCCTCCTAAGTAAAAT 59.358 40.000 0.00 0.00 36.04 1.82
980 5474 4.996434 CGATCGATGGGGCAGGGC 62.996 72.222 10.26 0.00 0.00 5.19
1035 5529 0.760189 ACACCTTGGTGGCTGCAAAT 60.760 50.000 21.98 0.00 40.22 2.32
1038 5532 2.126596 CAACACCTTGGTGGCTGCA 61.127 57.895 21.98 0.00 40.22 4.41
1087 5590 3.521126 AGCTTACCAGAACCAGATGACAT 59.479 43.478 0.00 0.00 0.00 3.06
1179 5733 6.636666 TCTCATACGTCCGAAATTAACAAC 57.363 37.500 0.00 0.00 0.00 3.32
1218 5785 4.018050 AGGCTCCAATCTTTATCACAGGTT 60.018 41.667 0.00 0.00 0.00 3.50
1219 5786 3.525199 AGGCTCCAATCTTTATCACAGGT 59.475 43.478 0.00 0.00 0.00 4.00
1271 5841 3.595758 GCTTGTTGCAGGTGCCGT 61.596 61.111 0.00 0.00 42.31 5.68
1391 5965 2.030823 TCGATCGAGCATGCATGAAAAC 59.969 45.455 30.64 12.27 0.00 2.43
1448 6033 8.034804 ACAGAGCGGCTTAAATTCATAAATTTT 58.965 29.630 2.97 0.00 41.27 1.82
1454 6039 4.127171 GGACAGAGCGGCTTAAATTCATA 58.873 43.478 2.97 0.00 0.00 2.15
1457 6042 2.356135 TGGACAGAGCGGCTTAAATTC 58.644 47.619 2.97 0.00 0.00 2.17
1491 6083 6.942576 CCCCATCAAGATCTATTCCGTTATTT 59.057 38.462 0.00 0.00 0.00 1.40
1497 6089 2.038952 TGCCCCATCAAGATCTATTCCG 59.961 50.000 0.00 0.00 0.00 4.30
1563 6155 2.753247 GGTGGAGAACCTCTCACCTAT 58.247 52.381 18.73 0.00 45.12 2.57
1565 6157 3.074788 GGTGGAGAACCTCTCACCT 57.925 57.895 18.73 0.00 45.12 4.00
1583 6175 4.692155 GGCCAATTTCAATGGAAAGTTCTG 59.308 41.667 0.00 0.00 45.58 3.02
1588 6180 6.016108 ACATTTTGGCCAATTTCAATGGAAAG 60.016 34.615 30.42 16.00 45.58 2.62
1648 6240 7.436673 CGCTAGAAGCACTAATGACTTTATCTT 59.563 37.037 0.00 0.00 42.58 2.40
1650 6242 6.144724 CCGCTAGAAGCACTAATGACTTTATC 59.855 42.308 0.00 0.00 42.58 1.75
1671 6263 3.744426 GGCAATTTATATGACGTACCGCT 59.256 43.478 0.00 0.00 0.00 5.52
1704 6296 5.957774 AGGGGCATCAGTGTGTAATATTTTT 59.042 36.000 0.00 0.00 0.00 1.94
1715 6307 3.134804 GTCACTTATAGGGGCATCAGTGT 59.865 47.826 0.00 0.00 33.66 3.55
1719 6311 2.770447 TGGTCACTTATAGGGGCATCA 58.230 47.619 0.00 0.00 0.00 3.07
1759 6353 3.555168 GGGACGGCATAGACTAGGAATTG 60.555 52.174 0.00 0.00 0.00 2.32
1763 6357 0.554305 TGGGACGGCATAGACTAGGA 59.446 55.000 0.00 0.00 0.00 2.94
1766 6360 1.108776 GTGTGGGACGGCATAGACTA 58.891 55.000 0.00 0.00 0.00 2.59
1767 6361 0.902984 TGTGTGGGACGGCATAGACT 60.903 55.000 0.00 0.00 0.00 3.24
1769 6363 0.902984 ACTGTGTGGGACGGCATAGA 60.903 55.000 0.00 0.00 33.72 1.98
1773 6367 2.579657 CCTACTGTGTGGGACGGCA 61.580 63.158 0.00 0.00 36.20 5.69
1778 6372 1.061546 GAAACCCCTACTGTGTGGGA 58.938 55.000 19.61 0.00 46.15 4.37
1814 6408 1.244019 GGTGCGTTTTCTCCCAGCAT 61.244 55.000 0.00 0.00 40.11 3.79
1815 6409 1.896660 GGTGCGTTTTCTCCCAGCA 60.897 57.895 0.00 0.00 35.27 4.41
1826 6420 2.438795 AAACGGGTGTGGTGCGTT 60.439 55.556 0.00 0.00 0.00 4.84
2108 6735 9.644993 GGCAACACTTTGTTAAATTTCATTAAC 57.355 29.630 0.00 0.00 38.77 2.01
2109 6736 9.383519 TGGCAACACTTTGTTAAATTTCATTAA 57.616 25.926 0.00 0.00 46.17 1.40
2110 6737 8.948631 TGGCAACACTTTGTTAAATTTCATTA 57.051 26.923 0.00 0.00 46.17 1.90
2111 6738 7.856145 TGGCAACACTTTGTTAAATTTCATT 57.144 28.000 0.00 0.00 46.17 2.57
2129 6756 4.167554 TCACCGATAACATTTTGGCAAC 57.832 40.909 0.00 0.00 0.00 4.17
2130 6757 4.742417 CATCACCGATAACATTTTGGCAA 58.258 39.130 0.00 0.00 0.00 4.52
2131 6758 3.428725 GCATCACCGATAACATTTTGGCA 60.429 43.478 0.00 0.00 0.00 4.92
2132 6759 3.115554 GCATCACCGATAACATTTTGGC 58.884 45.455 0.00 0.00 0.00 4.52
2133 6760 4.353737 CTGCATCACCGATAACATTTTGG 58.646 43.478 0.00 0.00 0.00 3.28
2134 6761 3.792956 GCTGCATCACCGATAACATTTTG 59.207 43.478 0.00 0.00 0.00 2.44
2135 6762 3.443329 TGCTGCATCACCGATAACATTTT 59.557 39.130 0.00 0.00 0.00 1.82
2136 6763 3.016031 TGCTGCATCACCGATAACATTT 58.984 40.909 0.00 0.00 0.00 2.32
2137 6764 2.642427 TGCTGCATCACCGATAACATT 58.358 42.857 0.00 0.00 0.00 2.71
2138 6765 2.330440 TGCTGCATCACCGATAACAT 57.670 45.000 0.00 0.00 0.00 2.71
2139 6766 2.106477 TTGCTGCATCACCGATAACA 57.894 45.000 1.84 0.00 0.00 2.41
2140 6767 3.485947 TTTTGCTGCATCACCGATAAC 57.514 42.857 1.84 0.00 0.00 1.89
2141 6768 3.947196 AGATTTTGCTGCATCACCGATAA 59.053 39.130 1.84 0.00 0.00 1.75
2142 6769 3.544684 AGATTTTGCTGCATCACCGATA 58.455 40.909 1.84 0.00 0.00 2.92
2143 6770 2.372264 AGATTTTGCTGCATCACCGAT 58.628 42.857 1.84 0.00 0.00 4.18
2144 6771 1.825090 AGATTTTGCTGCATCACCGA 58.175 45.000 1.84 0.00 0.00 4.69
2145 6772 2.256174 CAAGATTTTGCTGCATCACCG 58.744 47.619 1.84 0.00 0.00 4.94
2146 6773 3.308438 ACAAGATTTTGCTGCATCACC 57.692 42.857 1.84 0.00 37.85 4.02
2147 6774 6.956299 AATTACAAGATTTTGCTGCATCAC 57.044 33.333 1.84 0.00 37.85 3.06
2148 6775 7.966246 AAAATTACAAGATTTTGCTGCATCA 57.034 28.000 1.84 0.00 37.71 3.07
2225 6852 9.820725 GAATCATGAATATGTTTTGATTTCCCA 57.179 29.630 0.00 0.00 37.20 4.37
2284 6911 9.824534 ATTTTGGCGAACATTTTGATAAATTTC 57.175 25.926 0.00 0.00 31.63 2.17
2285 6912 9.609950 CATTTTGGCGAACATTTTGATAAATTT 57.390 25.926 0.00 0.00 31.63 1.82
2288 6915 7.721286 ACATTTTGGCGAACATTTTGATAAA 57.279 28.000 0.00 0.00 0.00 1.40
2292 6919 7.307632 CCAATAACATTTTGGCGAACATTTTGA 60.308 33.333 0.00 0.00 37.42 2.69
2293 6920 6.796072 CCAATAACATTTTGGCGAACATTTTG 59.204 34.615 0.00 0.00 37.42 2.44
2316 6944 2.102757 ACAACATTTTGCTGCATGACCA 59.897 40.909 1.84 0.00 36.00 4.02
2320 6948 3.743911 ACATGACAACATTTTGCTGCATG 59.256 39.130 1.84 15.41 41.34 4.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.