Multiple sequence alignment - TraesCS2B01G034300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G034300 chr2B 100.000 3926 0 0 1 3926 16825352 16829277 0.000000e+00 7251.0
1 TraesCS2B01G034300 chr2B 83.012 1089 114 37 991 2040 16855686 16856742 0.000000e+00 920.0
2 TraesCS2B01G034300 chr2B 83.627 794 82 13 1266 2041 16814513 16815276 0.000000e+00 702.0
3 TraesCS2B01G034300 chr2B 92.105 380 26 3 178 554 16813465 16813843 2.080000e-147 532.0
4 TraesCS2B01G034300 chr2B 85.243 515 73 3 2512 3024 17433072 17433585 9.660000e-146 527.0
5 TraesCS2B01G034300 chr2B 84.645 521 66 10 2512 3024 16857180 16857694 1.260000e-139 507.0
6 TraesCS2B01G034300 chr2B 80.060 662 81 21 3272 3926 16847446 16848063 1.000000e-120 444.0
7 TraesCS2B01G034300 chr2B 81.873 502 87 3 2523 3024 16815832 16816329 1.690000e-113 420.0
8 TraesCS2B01G034300 chr2B 89.902 307 26 4 1145 1446 17370026 17369720 1.320000e-104 390.0
9 TraesCS2B01G034300 chr2B 81.779 461 57 17 987 1440 17431423 17431863 1.040000e-95 361.0
10 TraesCS2B01G034300 chr2B 82.051 390 53 11 2516 2890 17368511 17368124 2.280000e-82 316.0
11 TraesCS2B01G034300 chr2B 88.995 209 21 1 178 384 16811450 16811658 1.400000e-64 257.0
12 TraesCS2B01G034300 chr2B 75.000 524 106 19 1525 2039 16198785 16199292 6.610000e-53 219.0
13 TraesCS2B01G034300 chr2B 83.402 241 25 6 987 1220 16814272 16814504 3.980000e-50 209.0
14 TraesCS2B01G034300 chr2A 89.374 687 45 11 3243 3926 11649711 11650372 0.000000e+00 839.0
15 TraesCS2B01G034300 chr2A 89.374 687 45 11 3243 3926 11690762 11691423 0.000000e+00 839.0
16 TraesCS2B01G034300 chr2A 86.237 465 56 6 986 1446 11916729 11916269 7.580000e-137 497.0
17 TraesCS2B01G034300 chr2A 77.170 841 140 29 2139 2944 11915379 11914556 3.600000e-120 442.0
18 TraesCS2B01G034300 chrUn 85.694 692 70 15 3243 3926 12174285 12174955 0.000000e+00 702.0
19 TraesCS2B01G034300 chrUn 79.978 919 152 26 2139 3037 12636049 12635143 0.000000e+00 649.0
20 TraesCS2B01G034300 chrUn 84.539 608 54 23 3328 3926 12171132 12171708 2.050000e-157 566.0
21 TraesCS2B01G034300 chrUn 90.083 363 34 2 2542 2904 12170726 12171086 1.650000e-128 470.0
22 TraesCS2B01G034300 chrUn 84.868 456 57 4 994 1440 12181196 12181648 2.150000e-122 449.0
23 TraesCS2B01G034300 chrUn 83.007 459 66 10 987 1440 321897927 321898378 4.720000e-109 405.0
24 TraesCS2B01G034300 chrUn 83.007 459 66 10 987 1440 351861644 351862095 4.720000e-109 405.0
25 TraesCS2B01G034300 chrUn 81.132 477 76 10 987 1452 12170087 12170560 1.720000e-98 370.0
26 TraesCS2B01G034300 chrUn 84.659 352 23 15 3328 3675 467992731 467993055 4.890000e-84 322.0
27 TraesCS2B01G034300 chrUn 88.060 134 14 2 2777 2910 467992560 467992691 1.460000e-34 158.0
28 TraesCS2B01G034300 chrUn 84.783 92 13 1 6 97 306430290 306430380 1.500000e-14 91.6
29 TraesCS2B01G034300 chr2D 88.121 564 64 3 2440 3001 11022201 11022763 0.000000e+00 667.0
30 TraesCS2B01G034300 chr2D 84.251 654 77 10 3276 3926 11029932 11030562 7.210000e-172 614.0
31 TraesCS2B01G034300 chr2D 92.402 408 16 5 3519 3926 10986649 10987041 5.690000e-158 568.0
32 TraesCS2B01G034300 chr2D 94.410 322 18 0 2120 2441 11016689 11017010 2.720000e-136 496.0
33 TraesCS2B01G034300 chr2D 86.245 458 52 7 986 1440 11038280 11038729 1.640000e-133 486.0
34 TraesCS2B01G034300 chr2D 82.432 444 61 8 2516 2944 11040126 11040567 4.790000e-99 372.0
35 TraesCS2B01G034300 chr2D 86.667 240 25 7 3690 3924 11023109 11023346 3.890000e-65 259.0
36 TraesCS2B01G034300 chr2D 84.959 246 28 3 3229 3468 10986393 10986635 1.410000e-59 241.0
37 TraesCS2B01G034300 chr2D 83.462 260 33 7 1525 1779 10915695 10915949 2.360000e-57 233.0
38 TraesCS2B01G034300 chr2D 82.171 258 16 11 3328 3581 11022760 11022991 1.110000e-45 195.0
39 TraesCS2B01G034300 chr2D 90.805 87 5 3 3610 3694 11022987 11023072 3.210000e-21 113.0
40 TraesCS2B01G034300 chr2D 80.000 155 28 2 2240 2391 11188896 11189050 1.150000e-20 111.0
41 TraesCS2B01G034300 chr7B 78.919 555 100 15 1500 2045 709555991 709556537 1.040000e-95 361.0
42 TraesCS2B01G034300 chr7B 74.159 832 165 35 1533 2350 709522374 709523169 2.290000e-77 300.0
43 TraesCS2B01G034300 chr7B 79.762 168 30 4 1533 1698 709557501 709557666 6.890000e-23 119.0
44 TraesCS2B01G034300 chr7B 82.796 93 16 0 5 97 461743200 461743292 2.510000e-12 84.2
45 TraesCS2B01G034300 chr7A 73.373 830 186 28 1533 2350 709294028 709294834 3.860000e-70 276.0
46 TraesCS2B01G034300 chr7A 81.148 122 19 4 9 130 411891512 411891629 1.160000e-15 95.3
47 TraesCS2B01G034300 chr7D 75.560 536 110 18 1518 2041 616309100 616309626 1.090000e-60 244.0
48 TraesCS2B01G034300 chr5B 90.000 90 6 2 7 95 21545522 21545609 3.210000e-21 113.0
49 TraesCS2B01G034300 chr5B 84.043 94 13 2 5 97 537777169 537777077 5.400000e-14 89.8
50 TraesCS2B01G034300 chr5B 82.796 93 16 0 5 97 516403951 516404043 2.510000e-12 84.2
51 TraesCS2B01G034300 chr6A 88.172 93 10 1 6 97 491581276 491581368 4.150000e-20 110.0
52 TraesCS2B01G034300 chr5A 85.870 92 12 1 7 97 6147551 6147460 3.230000e-16 97.1
53 TraesCS2B01G034300 chr6D 83.696 92 14 1 6 97 3715125 3715215 6.990000e-13 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G034300 chr2B 16825352 16829277 3925 False 7251.0 7251 100.0000 1 3926 1 chr2B.!!$F2 3925
1 TraesCS2B01G034300 chr2B 16855686 16857694 2008 False 713.5 920 83.8285 991 3024 2 chr2B.!!$F5 2033
2 TraesCS2B01G034300 chr2B 16847446 16848063 617 False 444.0 444 80.0600 3272 3926 1 chr2B.!!$F3 654
3 TraesCS2B01G034300 chr2B 17431423 17433585 2162 False 444.0 527 83.5110 987 3024 2 chr2B.!!$F6 2037
4 TraesCS2B01G034300 chr2B 16811450 16816329 4879 False 424.0 702 86.0004 178 3024 5 chr2B.!!$F4 2846
5 TraesCS2B01G034300 chr2B 17368124 17370026 1902 True 353.0 390 85.9765 1145 2890 2 chr2B.!!$R1 1745
6 TraesCS2B01G034300 chr2B 16198785 16199292 507 False 219.0 219 75.0000 1525 2039 1 chr2B.!!$F1 514
7 TraesCS2B01G034300 chr2A 11649711 11650372 661 False 839.0 839 89.3740 3243 3926 1 chr2A.!!$F1 683
8 TraesCS2B01G034300 chr2A 11690762 11691423 661 False 839.0 839 89.3740 3243 3926 1 chr2A.!!$F2 683
9 TraesCS2B01G034300 chr2A 11914556 11916729 2173 True 469.5 497 81.7035 986 2944 2 chr2A.!!$R1 1958
10 TraesCS2B01G034300 chrUn 12635143 12636049 906 True 649.0 649 79.9780 2139 3037 1 chrUn.!!$R1 898
11 TraesCS2B01G034300 chrUn 12170087 12174955 4868 False 527.0 702 85.3620 987 3926 4 chrUn.!!$F5 2939
12 TraesCS2B01G034300 chr2D 11029932 11030562 630 False 614.0 614 84.2510 3276 3926 1 chr2D.!!$F3 650
13 TraesCS2B01G034300 chr2D 11038280 11040567 2287 False 429.0 486 84.3385 986 2944 2 chr2D.!!$F7 1958
14 TraesCS2B01G034300 chr2D 10986393 10987041 648 False 404.5 568 88.6805 3229 3926 2 chr2D.!!$F5 697
15 TraesCS2B01G034300 chr2D 11022201 11023346 1145 False 308.5 667 86.9410 2440 3924 4 chr2D.!!$F6 1484
16 TraesCS2B01G034300 chr7B 709522374 709523169 795 False 300.0 300 74.1590 1533 2350 1 chr7B.!!$F2 817
17 TraesCS2B01G034300 chr7B 709555991 709557666 1675 False 240.0 361 79.3405 1500 2045 2 chr7B.!!$F3 545
18 TraesCS2B01G034300 chr7A 709294028 709294834 806 False 276.0 276 73.3730 1533 2350 1 chr7A.!!$F2 817
19 TraesCS2B01G034300 chr7D 616309100 616309626 526 False 244.0 244 75.5600 1518 2041 1 chr7D.!!$F1 523

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
560 2578 0.032515 TCCCTCCATAGTCGCCTTGA 60.033 55.0 0.0 0.0 0.0 3.02 F
1566 3907 0.169672 CTTGTGAGCTTGATTGGCCG 59.830 55.0 0.0 0.0 0.0 6.13 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2099 4694 0.036875 CACTTGGAAGAGACACCCCC 59.963 60.0 0.0 0.0 0.0 5.40 R
3195 6626 0.040794 AACTACACGGCCTACCCTCT 59.959 55.0 0.0 0.0 0.0 3.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
169 170 8.831000 ACAAAATATAAAAAGGACGAATACGC 57.169 30.769 0.00 0.00 43.96 4.42
170 171 7.637132 ACAAAATATAAAAAGGACGAATACGCG 59.363 33.333 3.53 3.53 43.96 6.01
171 172 5.834239 ATATAAAAAGGACGAATACGCGG 57.166 39.130 12.47 0.00 43.96 6.46
172 173 2.083167 AAAAAGGACGAATACGCGGA 57.917 45.000 12.47 0.00 43.96 5.54
173 174 1.353076 AAAAGGACGAATACGCGGAC 58.647 50.000 12.47 0.00 43.96 4.79
215 216 2.450609 TCCCGACCGAGAAGAAAAAG 57.549 50.000 0.00 0.00 0.00 2.27
216 217 1.690352 TCCCGACCGAGAAGAAAAAGT 59.310 47.619 0.00 0.00 0.00 2.66
218 219 2.547218 CCCGACCGAGAAGAAAAAGTGA 60.547 50.000 0.00 0.00 0.00 3.41
219 220 3.128349 CCGACCGAGAAGAAAAAGTGAA 58.872 45.455 0.00 0.00 0.00 3.18
220 221 3.558418 CCGACCGAGAAGAAAAAGTGAAA 59.442 43.478 0.00 0.00 0.00 2.69
221 222 4.034742 CCGACCGAGAAGAAAAAGTGAAAA 59.965 41.667 0.00 0.00 0.00 2.29
223 224 5.677178 CGACCGAGAAGAAAAAGTGAAAAAG 59.323 40.000 0.00 0.00 0.00 2.27
224 225 6.456449 CGACCGAGAAGAAAAAGTGAAAAAGA 60.456 38.462 0.00 0.00 0.00 2.52
225 226 7.153217 ACCGAGAAGAAAAAGTGAAAAAGAA 57.847 32.000 0.00 0.00 0.00 2.52
229 2247 8.578769 CGAGAAGAAAAAGTGAAAAAGAAACTG 58.421 33.333 0.00 0.00 0.00 3.16
289 2307 2.210116 ACGCGCTTACCTCCATTATTG 58.790 47.619 5.73 0.00 0.00 1.90
290 2308 2.159014 ACGCGCTTACCTCCATTATTGA 60.159 45.455 5.73 0.00 0.00 2.57
293 2311 4.598062 GCGCTTACCTCCATTATTGAAAC 58.402 43.478 0.00 0.00 0.00 2.78
304 2322 4.555262 CATTATTGAAACGGTTGCAAGGT 58.445 39.130 18.53 6.67 0.00 3.50
306 2324 0.457851 TTGAAACGGTTGCAAGGTGG 59.542 50.000 10.25 0.00 0.00 4.61
315 2333 3.357079 GCAAGGTGGTGCTGGACG 61.357 66.667 0.00 0.00 41.51 4.79
337 2355 1.019673 CAAGCAACCCAGATCCATCG 58.980 55.000 0.00 0.00 0.00 3.84
338 2356 0.749454 AAGCAACCCAGATCCATCGC 60.749 55.000 0.00 0.00 0.00 4.58
369 2387 3.827784 CAACTCGTCTTCGCCGCG 61.828 66.667 6.39 6.39 36.96 6.46
389 2407 1.569479 GACGAGCAAGCAACCCAGAC 61.569 60.000 0.00 0.00 0.00 3.51
411 2429 1.411977 CATCATCGTCTTCTCCAGCCT 59.588 52.381 0.00 0.00 0.00 4.58
423 2441 2.591072 CCAGCCTCAGGTCAGTGCT 61.591 63.158 0.00 0.00 0.00 4.40
448 2466 4.346129 GACGCCATCTTGCTTAATCTTTG 58.654 43.478 0.00 0.00 0.00 2.77
463 2481 7.467811 GCTTAATCTTTGTCTACCATGGACATG 60.468 40.741 21.47 8.71 42.26 3.21
505 2523 8.579850 TGCTTTTTCTACCATGTTCATTCTAT 57.420 30.769 0.00 0.00 0.00 1.98
509 2527 8.420374 TTTTCTACCATGTTCATTCTATCGAC 57.580 34.615 0.00 0.00 0.00 4.20
539 2557 9.507329 TGGCTAAAATCATGTAAGAATAGGATC 57.493 33.333 0.00 0.00 0.00 3.36
544 2562 9.579932 AAAATCATGTAAGAATAGGATCTTCCC 57.420 33.333 0.00 0.00 40.13 3.97
550 2568 7.544650 TGTAAGAATAGGATCTTCCCTCCATA 58.455 38.462 0.00 0.00 40.13 2.74
551 2569 7.676043 TGTAAGAATAGGATCTTCCCTCCATAG 59.324 40.741 0.00 0.00 40.13 2.23
552 2570 6.239856 AGAATAGGATCTTCCCTCCATAGT 57.760 41.667 0.00 0.00 37.19 2.12
553 2571 6.260663 AGAATAGGATCTTCCCTCCATAGTC 58.739 44.000 0.00 0.00 37.19 2.59
554 2572 2.883026 AGGATCTTCCCTCCATAGTCG 58.117 52.381 0.00 0.00 37.19 4.18
555 2573 1.273886 GGATCTTCCCTCCATAGTCGC 59.726 57.143 0.00 0.00 32.72 5.19
556 2574 1.273886 GATCTTCCCTCCATAGTCGCC 59.726 57.143 0.00 0.00 0.00 5.54
557 2575 0.261991 TCTTCCCTCCATAGTCGCCT 59.738 55.000 0.00 0.00 0.00 5.52
558 2576 1.123928 CTTCCCTCCATAGTCGCCTT 58.876 55.000 0.00 0.00 0.00 4.35
559 2577 0.830648 TTCCCTCCATAGTCGCCTTG 59.169 55.000 0.00 0.00 0.00 3.61
560 2578 0.032515 TCCCTCCATAGTCGCCTTGA 60.033 55.000 0.00 0.00 0.00 3.02
561 2579 1.051812 CCCTCCATAGTCGCCTTGAT 58.948 55.000 0.00 0.00 0.00 2.57
562 2580 2.158370 TCCCTCCATAGTCGCCTTGATA 60.158 50.000 0.00 0.00 0.00 2.15
563 2581 2.834549 CCCTCCATAGTCGCCTTGATAT 59.165 50.000 0.00 0.00 0.00 1.63
564 2582 3.261897 CCCTCCATAGTCGCCTTGATATT 59.738 47.826 0.00 0.00 0.00 1.28
565 2583 4.263068 CCCTCCATAGTCGCCTTGATATTT 60.263 45.833 0.00 0.00 0.00 1.40
566 2584 5.308825 CCTCCATAGTCGCCTTGATATTTT 58.691 41.667 0.00 0.00 0.00 1.82
567 2585 5.765182 CCTCCATAGTCGCCTTGATATTTTT 59.235 40.000 0.00 0.00 0.00 1.94
568 2586 6.293626 CCTCCATAGTCGCCTTGATATTTTTG 60.294 42.308 0.00 0.00 0.00 2.44
569 2587 5.530915 TCCATAGTCGCCTTGATATTTTTGG 59.469 40.000 0.00 0.00 0.00 3.28
570 2588 5.299279 CCATAGTCGCCTTGATATTTTTGGT 59.701 40.000 0.00 0.00 0.00 3.67
571 2589 6.183360 CCATAGTCGCCTTGATATTTTTGGTT 60.183 38.462 0.00 0.00 0.00 3.67
572 2590 5.310720 AGTCGCCTTGATATTTTTGGTTC 57.689 39.130 0.00 0.00 0.00 3.62
573 2591 4.157840 AGTCGCCTTGATATTTTTGGTTCC 59.842 41.667 0.00 0.00 0.00 3.62
583 2601 7.312154 TGATATTTTTGGTTCCAGTCAAATCG 58.688 34.615 8.16 0.00 33.58 3.34
585 2603 2.270352 TTGGTTCCAGTCAAATCGCT 57.730 45.000 0.00 0.00 0.00 4.93
597 2615 1.009829 AAATCGCTCTCCATTGTCGC 58.990 50.000 0.00 0.00 0.00 5.19
613 2631 1.134699 GTCGCATCAAGATCCAGGTCA 60.135 52.381 0.00 0.00 0.00 4.02
619 2637 1.980765 TCAAGATCCAGGTCAAGCAGT 59.019 47.619 0.00 0.00 0.00 4.40
629 2647 3.745458 CAGGTCAAGCAGTCTTCTTCTTC 59.255 47.826 0.00 0.00 0.00 2.87
634 2652 3.959535 AGCAGTCTTCTTCTTCCTCTG 57.040 47.619 0.00 0.00 0.00 3.35
638 2656 4.640364 CAGTCTTCTTCTTCCTCTGCTTT 58.360 43.478 0.00 0.00 0.00 3.51
639 2657 5.062528 CAGTCTTCTTCTTCCTCTGCTTTT 58.937 41.667 0.00 0.00 0.00 2.27
640 2658 5.179182 CAGTCTTCTTCTTCCTCTGCTTTTC 59.821 44.000 0.00 0.00 0.00 2.29
641 2659 5.071653 AGTCTTCTTCTTCCTCTGCTTTTCT 59.928 40.000 0.00 0.00 0.00 2.52
642 2660 5.762711 GTCTTCTTCTTCCTCTGCTTTTCTT 59.237 40.000 0.00 0.00 0.00 2.52
643 2661 5.762218 TCTTCTTCTTCCTCTGCTTTTCTTG 59.238 40.000 0.00 0.00 0.00 3.02
644 2662 3.817647 TCTTCTTCCTCTGCTTTTCTTGC 59.182 43.478 0.00 0.00 0.00 4.01
645 2663 3.498774 TCTTCCTCTGCTTTTCTTGCT 57.501 42.857 0.00 0.00 0.00 3.91
646 2664 3.406764 TCTTCCTCTGCTTTTCTTGCTC 58.593 45.455 0.00 0.00 0.00 4.26
647 2665 2.191128 TCCTCTGCTTTTCTTGCTCC 57.809 50.000 0.00 0.00 0.00 4.70
648 2666 1.421268 TCCTCTGCTTTTCTTGCTCCA 59.579 47.619 0.00 0.00 0.00 3.86
649 2667 1.811359 CCTCTGCTTTTCTTGCTCCAG 59.189 52.381 0.00 0.00 0.00 3.86
650 2668 1.199558 CTCTGCTTTTCTTGCTCCAGC 59.800 52.381 0.00 0.00 42.50 4.85
660 2678 3.824810 GCTCCAGCATCAGCCTTC 58.175 61.111 0.00 0.00 43.56 3.46
661 2679 1.224039 GCTCCAGCATCAGCCTTCT 59.776 57.895 0.00 0.00 43.56 2.85
662 2680 0.394080 GCTCCAGCATCAGCCTTCTT 60.394 55.000 0.00 0.00 43.56 2.52
663 2681 1.666054 CTCCAGCATCAGCCTTCTTC 58.334 55.000 0.00 0.00 43.56 2.87
664 2682 1.209990 CTCCAGCATCAGCCTTCTTCT 59.790 52.381 0.00 0.00 43.56 2.85
665 2683 1.632409 TCCAGCATCAGCCTTCTTCTT 59.368 47.619 0.00 0.00 43.56 2.52
666 2684 2.015587 CCAGCATCAGCCTTCTTCTTC 58.984 52.381 0.00 0.00 43.56 2.87
667 2685 2.015587 CAGCATCAGCCTTCTTCTTCC 58.984 52.381 0.00 0.00 43.56 3.46
668 2686 1.914798 AGCATCAGCCTTCTTCTTCCT 59.085 47.619 0.00 0.00 43.56 3.36
669 2687 2.093021 AGCATCAGCCTTCTTCTTCCTC 60.093 50.000 0.00 0.00 43.56 3.71
670 2688 2.093021 GCATCAGCCTTCTTCTTCCTCT 60.093 50.000 0.00 0.00 33.58 3.69
671 2689 3.533547 CATCAGCCTTCTTCTTCCTCTG 58.466 50.000 0.00 0.00 0.00 3.35
672 2690 1.277557 TCAGCCTTCTTCTTCCTCTGC 59.722 52.381 0.00 0.00 0.00 4.26
673 2691 1.278699 CAGCCTTCTTCTTCCTCTGCT 59.721 52.381 0.00 0.00 0.00 4.24
685 2703 0.801251 CCTCTGCTTTTCTTGCTCCG 59.199 55.000 0.00 0.00 0.00 4.63
690 2708 3.328288 CTTTTCTTGCTCCGGCGGC 62.328 63.158 23.83 11.62 42.25 6.53
713 2731 4.748144 CTGCCCACAGCCCCCTTC 62.748 72.222 0.00 0.00 42.71 3.46
716 2734 3.732849 CCCACAGCCCCCTTCCTC 61.733 72.222 0.00 0.00 0.00 3.71
724 2742 1.398234 CCCCCTTCCTCTCCTTCCT 59.602 63.158 0.00 0.00 0.00 3.36
737 2755 3.708220 CTTCCTGCTCGCCTCCGAC 62.708 68.421 0.00 0.00 38.82 4.79
758 2776 0.900647 AGGTCCTGTTCCTGTCCGAG 60.901 60.000 0.00 0.00 33.62 4.63
761 2779 2.266055 CTGTTCCTGTCCGAGCCC 59.734 66.667 0.00 0.00 0.00 5.19
764 2783 2.119611 TTCCTGTCCGAGCCCTGA 59.880 61.111 0.00 0.00 0.00 3.86
812 2832 1.064825 CTACCCCCACCAGTCAACTT 58.935 55.000 0.00 0.00 0.00 2.66
818 2838 1.656441 CACCAGTCAACTTGCTGCC 59.344 57.895 0.00 0.00 0.00 4.85
819 2839 1.102809 CACCAGTCAACTTGCTGCCA 61.103 55.000 0.00 0.00 0.00 4.92
820 2840 1.103398 ACCAGTCAACTTGCTGCCAC 61.103 55.000 0.00 0.00 0.00 5.01
821 2841 1.280746 CAGTCAACTTGCTGCCACG 59.719 57.895 0.00 0.00 0.00 4.94
826 2862 3.772853 AACTTGCTGCCACGCCTCA 62.773 57.895 0.00 0.00 0.00 3.86
827 2863 3.429141 CTTGCTGCCACGCCTCAG 61.429 66.667 0.00 0.00 0.00 3.35
839 2875 4.514577 CCTCAGGCGCGGTACTGG 62.515 72.222 8.83 0.66 35.47 4.00
840 2876 3.760035 CTCAGGCGCGGTACTGGT 61.760 66.667 8.83 0.00 35.47 4.00
857 2893 2.603473 TGTCCCCGTCTCACCCTG 60.603 66.667 0.00 0.00 0.00 4.45
862 2898 3.322466 CCGTCTCACCCTGGCCTT 61.322 66.667 3.32 0.00 0.00 4.35
863 2899 1.987855 CCGTCTCACCCTGGCCTTA 60.988 63.158 3.32 0.00 0.00 2.69
864 2900 1.517832 CGTCTCACCCTGGCCTTAG 59.482 63.158 3.32 0.00 0.00 2.18
866 2902 2.187946 CTCACCCTGGCCTTAGCG 59.812 66.667 3.32 0.00 41.24 4.26
869 2905 3.717294 ACCCTGGCCTTAGCGTGG 61.717 66.667 3.32 0.00 41.24 4.94
881 2919 0.319555 TAGCGTGGCAACTGACTGAC 60.320 55.000 0.00 0.00 37.61 3.51
908 2946 3.548818 CGAAAAACTTCAGGCACCTCAAG 60.549 47.826 0.00 0.00 0.00 3.02
913 2951 2.972713 ACTTCAGGCACCTCAAGAGTAA 59.027 45.455 7.38 0.00 0.00 2.24
921 2959 2.869801 CACCTCAAGAGTAACAAACGCA 59.130 45.455 0.00 0.00 0.00 5.24
933 2971 7.277981 AGAGTAACAAACGCAGAAACTATATGG 59.722 37.037 0.00 0.00 0.00 2.74
961 2999 1.655484 TCGTTGATCGATGCTGCATT 58.345 45.000 17.36 0.00 44.01 3.56
968 3006 4.136051 TGATCGATGCTGCATTCCATTAA 58.864 39.130 17.36 0.00 0.00 1.40
969 3007 4.763279 TGATCGATGCTGCATTCCATTAAT 59.237 37.500 17.36 3.27 0.00 1.40
970 3008 5.242171 TGATCGATGCTGCATTCCATTAATT 59.758 36.000 17.36 0.00 0.00 1.40
973 3011 5.978919 TCGATGCTGCATTCCATTAATTTTC 59.021 36.000 17.36 0.00 0.00 2.29
974 3012 5.176223 CGATGCTGCATTCCATTAATTTTCC 59.824 40.000 17.36 0.00 0.00 3.13
975 3013 5.680594 TGCTGCATTCCATTAATTTTCCT 57.319 34.783 0.00 0.00 0.00 3.36
976 3014 6.052405 TGCTGCATTCCATTAATTTTCCTT 57.948 33.333 0.00 0.00 0.00 3.36
977 3015 5.875910 TGCTGCATTCCATTAATTTTCCTTG 59.124 36.000 0.00 0.00 0.00 3.61
980 3018 7.094677 GCTGCATTCCATTAATTTTCCTTGTTT 60.095 33.333 0.00 0.00 0.00 2.83
981 3019 8.321650 TGCATTCCATTAATTTTCCTTGTTTC 57.678 30.769 0.00 0.00 0.00 2.78
982 3020 8.156165 TGCATTCCATTAATTTTCCTTGTTTCT 58.844 29.630 0.00 0.00 0.00 2.52
983 3021 8.659491 GCATTCCATTAATTTTCCTTGTTTCTC 58.341 33.333 0.00 0.00 0.00 2.87
984 3022 9.709495 CATTCCATTAATTTTCCTTGTTTCTCA 57.291 29.630 0.00 0.00 0.00 3.27
989 3070 7.524717 TTAATTTTCCTTGTTTCTCAGGAGG 57.475 36.000 0.00 0.00 0.00 4.30
998 3079 0.687757 TTCTCAGGAGGTAGCCGCAT 60.688 55.000 0.00 0.00 0.00 4.73
1006 3087 1.550524 GAGGTAGCCGCATCATGGATA 59.449 52.381 0.00 0.00 0.00 2.59
1015 3096 4.436050 GCCGCATCATGGATATTAAACTCG 60.436 45.833 0.00 0.00 0.00 4.18
1016 3097 4.690748 CCGCATCATGGATATTAAACTCGT 59.309 41.667 0.00 0.00 0.00 4.18
1041 3122 4.012374 AGATCGAAGCCATCACAAACAAT 58.988 39.130 0.00 0.00 0.00 2.71
1098 3190 3.773119 ACGGAGATGTTTACAGGGTATGT 59.227 43.478 0.00 0.00 46.45 2.29
1100 3192 4.809426 CGGAGATGTTTACAGGGTATGTTC 59.191 45.833 0.00 0.00 39.96 3.18
1102 3194 6.415573 GGAGATGTTTACAGGGTATGTTCTT 58.584 40.000 0.00 0.00 39.96 2.52
1111 3203 9.715121 TTTACAGGGTATGTTCTTTTACTACTG 57.285 33.333 0.00 0.00 39.96 2.74
1163 3265 9.376075 CTCACATTTACAATCAAGATCTGTACT 57.624 33.333 0.00 0.00 0.00 2.73
1196 3313 3.309954 GTCGATTTTATCAGGCCACTCAC 59.690 47.826 5.01 0.00 0.00 3.51
1209 3326 2.873649 GCCACTCACAAAGGAGAGGAAG 60.874 54.545 10.26 0.00 45.26 3.46
1286 3403 3.762779 CGAGTTCCGTAACCTTCGTAAT 58.237 45.455 0.00 0.00 36.15 1.89
1376 3493 2.110006 GGGGAGCTCATCTTCGCC 59.890 66.667 17.19 5.16 0.00 5.54
1391 3508 2.817423 CGCCAAAGAGATGGAGCGC 61.817 63.158 0.00 0.00 43.54 5.92
1446 3563 6.456501 AGCCTCGATAAACATATTACAGGTC 58.543 40.000 0.00 0.00 0.00 3.85
1520 3758 5.869344 TCATATATCTGACAAATACGCTGCC 59.131 40.000 0.00 0.00 0.00 4.85
1566 3907 0.169672 CTTGTGAGCTTGATTGGCCG 59.830 55.000 0.00 0.00 0.00 6.13
1641 3982 1.841277 TCGCAGGGGAAGCCTATTTTA 59.159 47.619 0.00 0.00 0.00 1.52
1790 4135 8.256611 ACACAGTAAGTTGATGCATACTTTAG 57.743 34.615 17.69 11.43 36.16 1.85
1794 4139 7.066284 CAGTAAGTTGATGCATACTTTAGGCTT 59.934 37.037 17.69 8.40 36.16 4.35
1799 4144 4.336433 TGATGCATACTTTAGGCTTGCTTC 59.664 41.667 0.00 12.84 37.74 3.86
1810 4178 2.744202 AGGCTTGCTTCGTTCTTGTATG 59.256 45.455 0.00 0.00 0.00 2.39
1815 4183 4.990543 TGCTTCGTTCTTGTATGACTTG 57.009 40.909 0.00 0.00 0.00 3.16
1833 4201 6.386654 TGACTTGAAACTGAGGTTTTGTTTC 58.613 36.000 9.90 9.90 44.58 2.78
1914 4288 6.464322 CCACCAGAATATGTAGACAATGGCTA 60.464 42.308 0.00 0.00 0.00 3.93
1927 4301 6.112734 AGACAATGGCTACATATCGAACAAA 58.887 36.000 0.00 0.00 35.94 2.83
1939 4313 7.136119 ACATATCGAACAAATTTGACGTGTTT 58.864 30.769 24.64 7.16 35.67 2.83
2029 4403 6.203530 TGTCTCACAAAGAGTTTATTGAGCTG 59.796 38.462 0.00 0.00 44.98 4.24
2048 4422 5.501156 AGCTGGTAAGAAAAATACTCCCTG 58.499 41.667 0.00 0.00 0.00 4.45
2049 4423 5.014228 AGCTGGTAAGAAAAATACTCCCTGT 59.986 40.000 0.00 0.00 0.00 4.00
2052 4426 6.843752 TGGTAAGAAAAATACTCCCTGTTGA 58.156 36.000 0.00 0.00 0.00 3.18
2058 4432 7.184862 AGAAAAATACTCCCTGTTGATTCCAT 58.815 34.615 0.00 0.00 0.00 3.41
2063 4658 5.715439 ACTCCCTGTTGATTCCATGAATA 57.285 39.130 0.00 0.00 31.89 1.75
2065 4660 7.392766 ACTCCCTGTTGATTCCATGAATATA 57.607 36.000 0.00 0.00 31.89 0.86
2092 4687 8.663209 AATTATACATACATCTCAGCCTCTCT 57.337 34.615 0.00 0.00 0.00 3.10
2093 4688 7.695480 TTATACATACATCTCAGCCTCTCTC 57.305 40.000 0.00 0.00 0.00 3.20
2094 4689 4.183223 ACATACATCTCAGCCTCTCTCT 57.817 45.455 0.00 0.00 0.00 3.10
2095 4690 4.545678 ACATACATCTCAGCCTCTCTCTT 58.454 43.478 0.00 0.00 0.00 2.85
2096 4691 4.961730 ACATACATCTCAGCCTCTCTCTTT 59.038 41.667 0.00 0.00 0.00 2.52
2099 4694 4.577875 ACATCTCAGCCTCTCTCTTTTTG 58.422 43.478 0.00 0.00 0.00 2.44
2100 4695 3.692257 TCTCAGCCTCTCTCTTTTTGG 57.308 47.619 0.00 0.00 0.00 3.28
2101 4696 2.304180 TCTCAGCCTCTCTCTTTTTGGG 59.696 50.000 0.00 0.00 0.00 4.12
2102 4697 1.352352 TCAGCCTCTCTCTTTTTGGGG 59.648 52.381 0.00 0.00 0.00 4.96
2103 4698 0.701147 AGCCTCTCTCTTTTTGGGGG 59.299 55.000 0.00 0.00 0.00 5.40
2104 4699 0.405973 GCCTCTCTCTTTTTGGGGGT 59.594 55.000 0.00 0.00 0.00 4.95
2105 4700 1.888391 GCCTCTCTCTTTTTGGGGGTG 60.888 57.143 0.00 0.00 0.00 4.61
2106 4701 1.425448 CCTCTCTCTTTTTGGGGGTGT 59.575 52.381 0.00 0.00 0.00 4.16
2107 4702 2.553247 CCTCTCTCTTTTTGGGGGTGTC 60.553 54.545 0.00 0.00 0.00 3.67
2108 4703 2.373502 CTCTCTCTTTTTGGGGGTGTCT 59.626 50.000 0.00 0.00 0.00 3.41
2109 4704 2.372172 TCTCTCTTTTTGGGGGTGTCTC 59.628 50.000 0.00 0.00 0.00 3.36
2110 4705 2.373502 CTCTCTTTTTGGGGGTGTCTCT 59.626 50.000 0.00 0.00 0.00 3.10
2111 4706 2.783510 TCTCTTTTTGGGGGTGTCTCTT 59.216 45.455 0.00 0.00 0.00 2.85
2112 4707 3.149981 CTCTTTTTGGGGGTGTCTCTTC 58.850 50.000 0.00 0.00 0.00 2.87
2113 4708 2.158519 TCTTTTTGGGGGTGTCTCTTCC 60.159 50.000 0.00 0.00 0.00 3.46
2114 4709 1.227249 TTTTGGGGGTGTCTCTTCCA 58.773 50.000 0.00 0.00 0.00 3.53
2115 4710 1.227249 TTTGGGGGTGTCTCTTCCAA 58.773 50.000 0.00 0.00 35.91 3.53
2116 4711 0.771127 TTGGGGGTGTCTCTTCCAAG 59.229 55.000 0.00 0.00 33.15 3.61
2120 4715 1.143073 GGGGTGTCTCTTCCAAGTGTT 59.857 52.381 0.00 0.00 0.00 3.32
2122 4717 3.557264 GGGGTGTCTCTTCCAAGTGTTAG 60.557 52.174 0.00 0.00 0.00 2.34
2123 4718 3.071167 GGGTGTCTCTTCCAAGTGTTAGT 59.929 47.826 0.00 0.00 0.00 2.24
2124 4719 4.282703 GGGTGTCTCTTCCAAGTGTTAGTA 59.717 45.833 0.00 0.00 0.00 1.82
2127 4722 7.034397 GGTGTCTCTTCCAAGTGTTAGTATAC 58.966 42.308 0.00 0.00 0.00 1.47
2190 4787 0.755327 AACTGGGCGAAAAGGTTGCT 60.755 50.000 0.00 0.00 0.00 3.91
2227 4833 1.416049 CTCGCACGAAACCGACATG 59.584 57.895 0.00 0.00 0.00 3.21
2236 4842 2.541556 GAAACCGACATGCTAGGAGTC 58.458 52.381 8.46 0.00 0.00 3.36
2241 4847 2.292016 CCGACATGCTAGGAGTCACTAG 59.708 54.545 12.02 9.93 42.63 2.57
2251 4857 5.105716 GCTAGGAGTCACTAGATGTGTTGAA 60.106 44.000 15.78 0.00 46.27 2.69
2299 4905 2.560981 CCGAAACAAAAGGCCCTGTATT 59.439 45.455 0.00 0.00 0.00 1.89
2341 4947 3.957497 TGGAGGAACTAGAAGCTGAGATC 59.043 47.826 0.00 0.00 41.55 2.75
2382 4991 3.077359 CTGACCAGTCAAAAGGCCTAAG 58.923 50.000 5.16 0.00 39.39 2.18
2473 5232 6.719365 ACAAACTTCTGTCAAATTCTTCTCG 58.281 36.000 0.00 0.00 0.00 4.04
2474 5233 6.538742 ACAAACTTCTGTCAAATTCTTCTCGA 59.461 34.615 0.00 0.00 0.00 4.04
2497 5275 0.241749 AGCGATGTTTGTACGACCGA 59.758 50.000 0.00 0.00 0.00 4.69
2498 5276 1.062258 GCGATGTTTGTACGACCGAA 58.938 50.000 0.00 0.00 0.00 4.30
2507 5285 0.441145 GTACGACCGAATGCACCAAC 59.559 55.000 0.00 0.00 0.00 3.77
2512 5290 0.108585 ACCGAATGCACCAACTGACT 59.891 50.000 0.00 0.00 0.00 3.41
2513 5291 0.798776 CCGAATGCACCAACTGACTC 59.201 55.000 0.00 0.00 0.00 3.36
2667 5449 6.087687 GCTTCATCGCATTCAACATATTGATG 59.912 38.462 0.00 0.00 44.36 3.07
2712 5494 2.855770 AAGCCAAGGGACCATGCCA 61.856 57.895 0.00 0.00 0.00 4.92
2796 5579 0.530744 GGTGTGACGACATGCTCCTA 59.469 55.000 0.00 0.00 33.63 2.94
2864 5659 0.165944 GAATTGTTCGACGTGGCCAG 59.834 55.000 5.11 2.58 0.00 4.85
2892 5687 0.112995 AGGTGGTTGATGTGGTGCAT 59.887 50.000 0.00 0.00 41.24 3.96
2913 5989 0.936600 TGCCAATCGCATATGTCACG 59.063 50.000 4.29 0.00 44.64 4.35
2919 5995 4.506288 CCAATCGCATATGTCACGTTAGAA 59.494 41.667 4.29 0.00 0.00 2.10
2920 5996 5.332581 CCAATCGCATATGTCACGTTAGAAG 60.333 44.000 4.29 0.00 0.00 2.85
2938 6014 2.818751 AGAGTAGTCTCCTCCACCAG 57.181 55.000 0.00 0.00 41.26 4.00
2969 6049 1.671054 GCTCAGGTGGTAAAGCGCA 60.671 57.895 11.47 0.00 0.00 6.09
2970 6050 1.234615 GCTCAGGTGGTAAAGCGCAA 61.235 55.000 11.47 0.00 0.00 4.85
2991 6071 6.484540 GCAATGTTGATAGATTCAGTCAGTG 58.515 40.000 0.00 0.00 38.20 3.66
3008 6439 3.755905 TCAGTGCTTGAGTTGTTGTTTGA 59.244 39.130 0.00 0.00 0.00 2.69
3020 6451 4.712122 TGTTGTTTGAGAAAGGGTGTTC 57.288 40.909 0.00 0.00 0.00 3.18
3031 6462 5.340010 GAAAGGGTGTTCTTTCTTACGTC 57.660 43.478 0.00 0.00 45.38 4.34
3032 6463 4.684484 AAGGGTGTTCTTTCTTACGTCT 57.316 40.909 0.00 0.00 0.00 4.18
3033 6464 5.796424 AAGGGTGTTCTTTCTTACGTCTA 57.204 39.130 0.00 0.00 0.00 2.59
3035 6466 4.831710 AGGGTGTTCTTTCTTACGTCTAGT 59.168 41.667 0.00 0.00 0.00 2.57
3036 6467 5.303845 AGGGTGTTCTTTCTTACGTCTAGTT 59.696 40.000 0.00 0.00 0.00 2.24
3039 6470 6.867293 GGTGTTCTTTCTTACGTCTAGTTGAT 59.133 38.462 0.00 0.00 0.00 2.57
3040 6471 7.062022 GGTGTTCTTTCTTACGTCTAGTTGATC 59.938 40.741 0.00 0.00 0.00 2.92
3041 6472 6.800408 TGTTCTTTCTTACGTCTAGTTGATCG 59.200 38.462 0.00 0.00 0.00 3.69
3042 6473 6.492007 TCTTTCTTACGTCTAGTTGATCGT 57.508 37.500 0.00 7.18 36.75 3.73
3043 6474 6.541086 TCTTTCTTACGTCTAGTTGATCGTC 58.459 40.000 0.00 0.00 35.38 4.20
3046 6477 4.934001 TCTTACGTCTAGTTGATCGTCTGT 59.066 41.667 0.00 0.00 35.38 3.41
3047 6478 6.101997 TCTTACGTCTAGTTGATCGTCTGTA 58.898 40.000 0.00 0.00 35.38 2.74
3048 6479 4.596801 ACGTCTAGTTGATCGTCTGTAC 57.403 45.455 0.00 0.00 30.77 2.90
3050 6481 4.694509 ACGTCTAGTTGATCGTCTGTACTT 59.305 41.667 0.00 0.00 30.77 2.24
3051 6482 5.163874 ACGTCTAGTTGATCGTCTGTACTTC 60.164 44.000 0.00 0.00 30.77 3.01
3052 6483 5.571277 GTCTAGTTGATCGTCTGTACTTCC 58.429 45.833 0.00 0.00 0.00 3.46
3055 6486 5.407407 AGTTGATCGTCTGTACTTCCATT 57.593 39.130 0.00 0.00 0.00 3.16
3056 6487 5.171476 AGTTGATCGTCTGTACTTCCATTG 58.829 41.667 0.00 0.00 0.00 2.82
3057 6488 4.801330 TGATCGTCTGTACTTCCATTGT 57.199 40.909 0.00 0.00 0.00 2.71
3059 6490 5.547465 TGATCGTCTGTACTTCCATTGTTT 58.453 37.500 0.00 0.00 0.00 2.83
3060 6491 5.408299 TGATCGTCTGTACTTCCATTGTTTG 59.592 40.000 0.00 0.00 0.00 2.93
3061 6492 4.951254 TCGTCTGTACTTCCATTGTTTGA 58.049 39.130 0.00 0.00 0.00 2.69
3062 6493 4.988540 TCGTCTGTACTTCCATTGTTTGAG 59.011 41.667 0.00 0.00 0.00 3.02
3066 6497 7.355778 GTCTGTACTTCCATTGTTTGAGAAAG 58.644 38.462 0.00 0.00 0.00 2.62
3068 6499 6.361433 TGTACTTCCATTGTTTGAGAAAGGA 58.639 36.000 0.00 0.00 0.00 3.36
3069 6500 6.486657 TGTACTTCCATTGTTTGAGAAAGGAG 59.513 38.462 0.00 0.00 0.00 3.69
3071 6502 5.532779 ACTTCCATTGTTTGAGAAAGGAGTC 59.467 40.000 0.00 0.00 0.00 3.36
3072 6503 5.047566 TCCATTGTTTGAGAAAGGAGTCA 57.952 39.130 0.00 0.00 0.00 3.41
3073 6504 5.634118 TCCATTGTTTGAGAAAGGAGTCAT 58.366 37.500 0.00 0.00 0.00 3.06
3074 6505 6.778821 TCCATTGTTTGAGAAAGGAGTCATA 58.221 36.000 0.00 0.00 0.00 2.15
3076 6507 6.402550 CCATTGTTTGAGAAAGGAGTCATACG 60.403 42.308 0.00 0.00 29.96 3.06
3077 6508 4.566004 TGTTTGAGAAAGGAGTCATACGG 58.434 43.478 0.00 0.00 29.96 4.02
3078 6509 4.282449 TGTTTGAGAAAGGAGTCATACGGA 59.718 41.667 0.00 0.00 29.96 4.69
3079 6510 5.046591 TGTTTGAGAAAGGAGTCATACGGAT 60.047 40.000 0.00 0.00 29.96 4.18
3081 6512 4.537751 TGAGAAAGGAGTCATACGGATCT 58.462 43.478 0.00 0.00 0.00 2.75
3083 6514 5.422331 TGAGAAAGGAGTCATACGGATCTTT 59.578 40.000 0.00 0.00 0.00 2.52
3084 6515 5.908341 AGAAAGGAGTCATACGGATCTTTC 58.092 41.667 9.63 9.63 38.59 2.62
3086 6517 2.623889 AGGAGTCATACGGATCTTTCGG 59.376 50.000 0.00 0.00 0.00 4.30
3087 6518 2.361438 GGAGTCATACGGATCTTTCGGT 59.639 50.000 0.00 0.00 38.74 4.69
3090 6521 5.450965 GGAGTCATACGGATCTTTCGGTAAA 60.451 44.000 0.00 0.00 39.98 2.01
3091 6522 5.346522 AGTCATACGGATCTTTCGGTAAAC 58.653 41.667 0.00 0.00 39.98 2.01
3093 6524 5.231568 GTCATACGGATCTTTCGGTAAACAG 59.768 44.000 0.00 0.00 39.98 3.16
3094 6525 2.968675 ACGGATCTTTCGGTAAACAGG 58.031 47.619 0.00 0.00 34.02 4.00
3095 6526 2.301009 ACGGATCTTTCGGTAAACAGGT 59.699 45.455 0.00 0.00 34.02 4.00
3096 6527 2.671396 CGGATCTTTCGGTAAACAGGTG 59.329 50.000 0.00 0.00 0.00 4.00
3097 6528 3.007635 GGATCTTTCGGTAAACAGGTGG 58.992 50.000 0.00 0.00 0.00 4.61
3098 6529 3.307199 GGATCTTTCGGTAAACAGGTGGA 60.307 47.826 0.00 0.00 0.00 4.02
3099 6530 3.396260 TCTTTCGGTAAACAGGTGGAG 57.604 47.619 0.00 0.00 0.00 3.86
3100 6531 1.804748 CTTTCGGTAAACAGGTGGAGC 59.195 52.381 0.00 0.00 0.00 4.70
3101 6532 0.759959 TTCGGTAAACAGGTGGAGCA 59.240 50.000 0.00 0.00 0.00 4.26
3102 6533 0.759959 TCGGTAAACAGGTGGAGCAA 59.240 50.000 0.00 0.00 0.00 3.91
3103 6534 1.349688 TCGGTAAACAGGTGGAGCAAT 59.650 47.619 0.00 0.00 0.00 3.56
3104 6535 2.568062 TCGGTAAACAGGTGGAGCAATA 59.432 45.455 0.00 0.00 0.00 1.90
3105 6536 2.936498 CGGTAAACAGGTGGAGCAATAG 59.064 50.000 0.00 0.00 0.00 1.73
3106 6537 3.369052 CGGTAAACAGGTGGAGCAATAGA 60.369 47.826 0.00 0.00 0.00 1.98
3107 6538 4.585879 GGTAAACAGGTGGAGCAATAGAA 58.414 43.478 0.00 0.00 0.00 2.10
3109 6540 3.788227 AACAGGTGGAGCAATAGAACA 57.212 42.857 0.00 0.00 0.00 3.18
3110 6541 3.059352 ACAGGTGGAGCAATAGAACAC 57.941 47.619 0.00 0.00 0.00 3.32
3112 6543 2.789409 GGTGGAGCAATAGAACACCT 57.211 50.000 0.00 0.00 46.12 4.00
3114 6545 2.027192 GGTGGAGCAATAGAACACCTGA 60.027 50.000 0.00 0.00 46.12 3.86
3116 6547 4.072131 GTGGAGCAATAGAACACCTGAAA 58.928 43.478 0.00 0.00 0.00 2.69
3117 6548 4.154918 GTGGAGCAATAGAACACCTGAAAG 59.845 45.833 0.00 0.00 0.00 2.62
3121 6552 3.667960 GCAATAGAACACCTGAAAGTGCG 60.668 47.826 0.00 0.00 41.67 5.34
3122 6553 2.163818 TAGAACACCTGAAAGTGCGG 57.836 50.000 0.00 0.00 41.67 5.69
3123 6554 0.180406 AGAACACCTGAAAGTGCGGT 59.820 50.000 0.00 0.00 41.67 5.68
3125 6556 2.038557 AGAACACCTGAAAGTGCGGTAT 59.961 45.455 0.00 0.00 41.67 2.73
3126 6557 3.259876 AGAACACCTGAAAGTGCGGTATA 59.740 43.478 0.00 0.00 41.67 1.47
3127 6558 3.906720 ACACCTGAAAGTGCGGTATAT 57.093 42.857 0.00 0.00 41.67 0.86
3128 6559 5.128171 AGAACACCTGAAAGTGCGGTATATA 59.872 40.000 0.00 0.00 41.67 0.86
3129 6560 5.347620 ACACCTGAAAGTGCGGTATATAA 57.652 39.130 0.00 0.00 41.67 0.98
3130 6561 5.736813 ACACCTGAAAGTGCGGTATATAAA 58.263 37.500 0.00 0.00 41.67 1.40
3131 6562 6.354130 ACACCTGAAAGTGCGGTATATAAAT 58.646 36.000 0.00 0.00 41.67 1.40
3132 6563 7.502696 ACACCTGAAAGTGCGGTATATAAATA 58.497 34.615 0.00 0.00 41.67 1.40
3133 6564 7.656137 ACACCTGAAAGTGCGGTATATAAATAG 59.344 37.037 0.00 0.00 41.67 1.73
3135 6566 7.159372 CCTGAAAGTGCGGTATATAAATAGGT 58.841 38.462 0.00 0.00 0.00 3.08
3137 6568 9.136952 CTGAAAGTGCGGTATATAAATAGGTAC 57.863 37.037 0.00 0.00 0.00 3.34
3138 6569 8.090214 TGAAAGTGCGGTATATAAATAGGTACC 58.910 37.037 2.73 2.73 34.58 3.34
3139 6570 7.787623 AAGTGCGGTATATAAATAGGTACCT 57.212 36.000 20.57 20.57 35.53 3.08
3141 6572 8.286191 AGTGCGGTATATAAATAGGTACCTAC 57.714 38.462 24.07 11.01 35.53 3.18
3142 6573 7.066284 AGTGCGGTATATAAATAGGTACCTACG 59.934 40.741 24.07 18.65 35.53 3.51
3143 6574 6.183360 TGCGGTATATAAATAGGTACCTACGC 60.183 42.308 27.55 27.55 35.53 4.42
3144 6575 6.038714 GCGGTATATAAATAGGTACCTACGCT 59.961 42.308 27.24 17.37 35.53 5.07
3145 6576 7.634522 CGGTATATAAATAGGTACCTACGCTC 58.365 42.308 24.07 8.95 35.53 5.03
3147 6578 9.838339 GGTATATAAATAGGTACCTACGCTCTA 57.162 37.037 24.07 12.02 34.98 2.43
3151 6582 4.720775 ATAGGTACCTACGCTCTAACCT 57.279 45.455 24.07 0.99 40.38 3.50
3152 6583 3.378861 AGGTACCTACGCTCTAACCTT 57.621 47.619 14.41 0.00 33.59 3.50
3153 6584 4.510167 AGGTACCTACGCTCTAACCTTA 57.490 45.455 14.41 0.00 33.59 2.69
3155 6586 4.080072 AGGTACCTACGCTCTAACCTTAGT 60.080 45.833 14.41 0.00 33.59 2.24
3156 6587 5.131142 AGGTACCTACGCTCTAACCTTAGTA 59.869 44.000 14.41 0.00 33.59 1.82
3157 6588 6.000840 GGTACCTACGCTCTAACCTTAGTAT 58.999 44.000 4.06 0.00 32.61 2.12
3158 6589 7.016661 AGGTACCTACGCTCTAACCTTAGTATA 59.983 40.741 14.41 0.00 33.59 1.47
3159 6590 7.118535 GGTACCTACGCTCTAACCTTAGTATAC 59.881 44.444 4.06 0.00 32.61 1.47
3160 6591 6.595682 ACCTACGCTCTAACCTTAGTATACA 58.404 40.000 5.50 0.00 32.61 2.29
3161 6592 7.230027 ACCTACGCTCTAACCTTAGTATACAT 58.770 38.462 5.50 0.00 32.61 2.29
3162 6593 7.723172 ACCTACGCTCTAACCTTAGTATACATT 59.277 37.037 5.50 0.00 32.61 2.71
3166 6597 9.293404 ACGCTCTAACCTTAGTATACATTATGA 57.707 33.333 5.50 0.00 32.61 2.15
3167 6598 9.776158 CGCTCTAACCTTAGTATACATTATGAG 57.224 37.037 5.50 3.79 32.61 2.90
3168 6599 9.575783 GCTCTAACCTTAGTATACATTATGAGC 57.424 37.037 5.50 9.29 34.11 4.26
3169 6600 9.776158 CTCTAACCTTAGTATACATTATGAGCG 57.224 37.037 5.50 0.00 32.61 5.03
3170 6601 8.737175 TCTAACCTTAGTATACATTATGAGCGG 58.263 37.037 5.50 0.00 32.61 5.52
3171 6602 5.721232 ACCTTAGTATACATTATGAGCGGC 58.279 41.667 5.50 0.00 0.00 6.53
3173 6604 5.577164 CCTTAGTATACATTATGAGCGGCAC 59.423 44.000 5.50 0.00 0.00 5.01
3174 6605 3.926616 AGTATACATTATGAGCGGCACC 58.073 45.455 5.50 0.00 0.00 5.01
3175 6606 2.928801 ATACATTATGAGCGGCACCA 57.071 45.000 1.45 0.00 0.00 4.17
3177 6608 1.382522 ACATTATGAGCGGCACCAAG 58.617 50.000 1.45 0.00 0.00 3.61
3178 6609 0.664761 CATTATGAGCGGCACCAAGG 59.335 55.000 1.45 0.00 0.00 3.61
3179 6610 0.546122 ATTATGAGCGGCACCAAGGA 59.454 50.000 1.45 0.00 0.00 3.36
3180 6611 0.326595 TTATGAGCGGCACCAAGGAA 59.673 50.000 1.45 0.00 0.00 3.36
3182 6613 0.539438 ATGAGCGGCACCAAGGAAAA 60.539 50.000 1.45 0.00 0.00 2.29
3184 6615 0.889186 GAGCGGCACCAAGGAAAAGA 60.889 55.000 1.45 0.00 0.00 2.52
3185 6616 1.172812 AGCGGCACCAAGGAAAAGAC 61.173 55.000 1.45 0.00 0.00 3.01
3186 6617 1.452145 GCGGCACCAAGGAAAAGACA 61.452 55.000 0.00 0.00 0.00 3.41
3189 6620 2.420022 CGGCACCAAGGAAAAGACATAG 59.580 50.000 0.00 0.00 0.00 2.23
3190 6621 2.755103 GGCACCAAGGAAAAGACATAGG 59.245 50.000 0.00 0.00 0.00 2.57
3191 6622 3.561313 GGCACCAAGGAAAAGACATAGGA 60.561 47.826 0.00 0.00 0.00 2.94
3192 6623 4.079253 GCACCAAGGAAAAGACATAGGAA 58.921 43.478 0.00 0.00 0.00 3.36
3193 6624 4.706962 GCACCAAGGAAAAGACATAGGAAT 59.293 41.667 0.00 0.00 0.00 3.01
3194 6625 5.185828 GCACCAAGGAAAAGACATAGGAATT 59.814 40.000 0.00 0.00 0.00 2.17
3195 6626 6.377146 GCACCAAGGAAAAGACATAGGAATTA 59.623 38.462 0.00 0.00 0.00 1.40
3196 6627 7.415653 GCACCAAGGAAAAGACATAGGAATTAG 60.416 40.741 0.00 0.00 0.00 1.73
3197 6628 7.829211 CACCAAGGAAAAGACATAGGAATTAGA 59.171 37.037 0.00 0.00 0.00 2.10
3198 6629 8.049721 ACCAAGGAAAAGACATAGGAATTAGAG 58.950 37.037 0.00 0.00 0.00 2.43
3199 6630 7.500559 CCAAGGAAAAGACATAGGAATTAGAGG 59.499 40.741 0.00 0.00 0.00 3.69
3200 6631 7.142995 AGGAAAAGACATAGGAATTAGAGGG 57.857 40.000 0.00 0.00 0.00 4.30
3201 6632 6.678857 AGGAAAAGACATAGGAATTAGAGGGT 59.321 38.462 0.00 0.00 0.00 4.34
3203 6634 8.151596 GGAAAAGACATAGGAATTAGAGGGTAG 58.848 40.741 0.00 0.00 0.00 3.18
3204 6635 7.619512 AAAGACATAGGAATTAGAGGGTAGG 57.380 40.000 0.00 0.00 0.00 3.18
3205 6636 5.088026 AGACATAGGAATTAGAGGGTAGGC 58.912 45.833 0.00 0.00 0.00 3.93
3206 6637 4.168883 ACATAGGAATTAGAGGGTAGGCC 58.831 47.826 0.00 0.00 0.00 5.19
3207 6638 1.718280 AGGAATTAGAGGGTAGGCCG 58.282 55.000 0.00 0.00 34.97 6.13
3209 6640 1.070289 GGAATTAGAGGGTAGGCCGTG 59.930 57.143 0.00 0.00 34.97 4.94
3210 6641 1.761198 GAATTAGAGGGTAGGCCGTGT 59.239 52.381 0.00 0.00 34.97 4.49
3212 6643 2.062971 TTAGAGGGTAGGCCGTGTAG 57.937 55.000 0.00 0.00 31.45 2.74
3213 6644 0.921896 TAGAGGGTAGGCCGTGTAGT 59.078 55.000 0.00 0.00 34.97 2.73
3215 6646 0.459078 GAGGGTAGGCCGTGTAGTTC 59.541 60.000 0.00 0.00 34.97 3.01
3216 6647 0.251922 AGGGTAGGCCGTGTAGTTCA 60.252 55.000 0.00 0.00 34.97 3.18
3218 6649 0.604578 GGTAGGCCGTGTAGTTCACA 59.395 55.000 0.00 0.00 46.44 3.58
3221 6652 2.561478 AGGCCGTGTAGTTCACAATT 57.439 45.000 0.00 0.00 46.44 2.32
3223 6654 2.812011 AGGCCGTGTAGTTCACAATTTC 59.188 45.455 0.00 0.00 46.44 2.17
3225 6656 3.998341 GGCCGTGTAGTTCACAATTTCTA 59.002 43.478 0.61 0.00 46.44 2.10
3226 6657 4.453136 GGCCGTGTAGTTCACAATTTCTAA 59.547 41.667 0.61 0.00 46.44 2.10
3227 6658 5.379827 GCCGTGTAGTTCACAATTTCTAAC 58.620 41.667 0.61 0.00 46.44 2.34
3232 9220 7.474332 CGTGTAGTTCACAATTTCTAACAATCG 59.526 37.037 0.61 0.00 46.44 3.34
3237 9225 6.721571 TCACAATTTCTAACAATCGAGACC 57.278 37.500 0.00 0.00 0.00 3.85
3239 9227 6.590292 TCACAATTTCTAACAATCGAGACCTC 59.410 38.462 0.00 0.00 0.00 3.85
3250 9238 5.422331 ACAATCGAGACCTCTGGATAAGAAA 59.578 40.000 0.73 0.00 39.93 2.52
3259 9247 6.352516 ACCTCTGGATAAGAAATGATGACAC 58.647 40.000 0.00 0.00 33.37 3.67
3260 9248 6.070021 ACCTCTGGATAAGAAATGATGACACA 60.070 38.462 0.00 0.00 33.37 3.72
3296 9284 5.851720 AGACCATATCTAGCATTGACACTG 58.148 41.667 0.00 0.00 35.15 3.66
3469 9464 4.570369 CCGCATACACATATCAGTTTCACA 59.430 41.667 0.00 0.00 0.00 3.58
3470 9465 5.492854 CGCATACACATATCAGTTTCACAC 58.507 41.667 0.00 0.00 0.00 3.82
3471 9466 5.291858 CGCATACACATATCAGTTTCACACT 59.708 40.000 0.00 0.00 35.35 3.55
3473 9468 7.530010 GCATACACATATCAGTTTCACACTTT 58.470 34.615 0.00 0.00 30.92 2.66
3474 9469 8.023128 GCATACACATATCAGTTTCACACTTTT 58.977 33.333 0.00 0.00 30.92 2.27
3477 9472 8.677148 ACACATATCAGTTTCACACTTTTACT 57.323 30.769 0.00 0.00 30.92 2.24
3478 9473 9.120538 ACACATATCAGTTTCACACTTTTACTT 57.879 29.630 0.00 0.00 30.92 2.24
3480 9475 9.950680 ACATATCAGTTTCACACTTTTACTTTG 57.049 29.630 0.00 0.00 30.92 2.77
3481 9476 9.398170 CATATCAGTTTCACACTTTTACTTTGG 57.602 33.333 0.00 0.00 30.92 3.28
3482 9477 7.639113 ATCAGTTTCACACTTTTACTTTGGA 57.361 32.000 0.00 0.00 30.92 3.53
3483 9478 7.083875 TCAGTTTCACACTTTTACTTTGGAG 57.916 36.000 0.00 0.00 30.92 3.86
3484 9479 6.882140 TCAGTTTCACACTTTTACTTTGGAGA 59.118 34.615 0.00 0.00 30.92 3.71
3485 9480 7.392113 TCAGTTTCACACTTTTACTTTGGAGAA 59.608 33.333 0.00 0.00 30.92 2.87
3709 9746 8.524870 TTCGCGAGTAGAAGTTAATTTAGTTT 57.475 30.769 9.59 0.00 0.00 2.66
3737 9776 7.637229 TGTTAATTTGTATTGTTTTCGGACGA 58.363 30.769 0.00 0.00 0.00 4.20
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
123 124 9.804758 TTTTGTACCAAACTTTGATCGTAAAAT 57.195 25.926 2.87 0.00 0.00 1.82
124 125 9.804758 ATTTTGTACCAAACTTTGATCGTAAAA 57.195 25.926 2.87 5.11 0.00 1.52
136 137 9.902196 CGTCCTTTTTATATTTTGTACCAAACT 57.098 29.630 0.00 0.00 0.00 2.66
137 138 9.896263 TCGTCCTTTTTATATTTTGTACCAAAC 57.104 29.630 0.00 0.00 0.00 2.93
143 144 9.919348 GCGTATTCGTCCTTTTTATATTTTGTA 57.081 29.630 0.00 0.00 39.49 2.41
144 145 7.637132 CGCGTATTCGTCCTTTTTATATTTTGT 59.363 33.333 0.00 0.00 39.49 2.83
145 146 7.111041 CCGCGTATTCGTCCTTTTTATATTTTG 59.889 37.037 4.92 0.00 39.49 2.44
146 147 7.011295 TCCGCGTATTCGTCCTTTTTATATTTT 59.989 33.333 4.92 0.00 39.49 1.82
147 148 6.479660 TCCGCGTATTCGTCCTTTTTATATTT 59.520 34.615 4.92 0.00 39.49 1.40
148 149 5.984926 TCCGCGTATTCGTCCTTTTTATATT 59.015 36.000 4.92 0.00 39.49 1.28
149 150 5.403466 GTCCGCGTATTCGTCCTTTTTATAT 59.597 40.000 4.92 0.00 39.49 0.86
150 151 4.739716 GTCCGCGTATTCGTCCTTTTTATA 59.260 41.667 4.92 0.00 39.49 0.98
151 152 3.553105 GTCCGCGTATTCGTCCTTTTTAT 59.447 43.478 4.92 0.00 39.49 1.40
152 153 2.923020 GTCCGCGTATTCGTCCTTTTTA 59.077 45.455 4.92 0.00 39.49 1.52
153 154 1.728425 GTCCGCGTATTCGTCCTTTTT 59.272 47.619 4.92 0.00 39.49 1.94
154 155 1.353076 GTCCGCGTATTCGTCCTTTT 58.647 50.000 4.92 0.00 39.49 2.27
155 156 0.799534 CGTCCGCGTATTCGTCCTTT 60.800 55.000 4.92 0.00 39.49 3.11
156 157 1.226491 CGTCCGCGTATTCGTCCTT 60.226 57.895 4.92 0.00 39.49 3.36
157 158 2.406401 CGTCCGCGTATTCGTCCT 59.594 61.111 4.92 0.00 39.49 3.85
167 168 2.744787 ACAGTATTACTACGTCCGCG 57.255 50.000 0.00 0.00 44.93 6.46
168 169 4.536364 TGTACAGTATTACTACGTCCGC 57.464 45.455 0.00 0.00 32.82 5.54
169 170 7.243487 TCTTTTGTACAGTATTACTACGTCCG 58.757 38.462 0.00 0.00 32.82 4.79
170 171 9.578439 AATCTTTTGTACAGTATTACTACGTCC 57.422 33.333 0.00 0.00 32.82 4.79
172 173 9.578439 GGAATCTTTTGTACAGTATTACTACGT 57.422 33.333 0.00 0.00 32.82 3.57
173 174 9.028185 GGGAATCTTTTGTACAGTATTACTACG 57.972 37.037 0.00 0.00 32.82 3.51
174 175 9.028185 CGGGAATCTTTTGTACAGTATTACTAC 57.972 37.037 0.00 0.00 0.00 2.73
175 176 8.970020 TCGGGAATCTTTTGTACAGTATTACTA 58.030 33.333 0.00 0.00 0.00 1.82
176 177 7.763071 GTCGGGAATCTTTTGTACAGTATTACT 59.237 37.037 0.00 0.00 0.00 2.24
180 181 5.425630 GGTCGGGAATCTTTTGTACAGTAT 58.574 41.667 0.00 0.00 0.00 2.12
189 190 2.565834 TCTTCTCGGTCGGGAATCTTTT 59.434 45.455 6.12 0.00 33.70 2.27
190 191 2.176889 TCTTCTCGGTCGGGAATCTTT 58.823 47.619 6.12 0.00 33.70 2.52
191 192 1.848652 TCTTCTCGGTCGGGAATCTT 58.151 50.000 6.12 0.00 33.70 2.40
215 216 6.128007 TGACTTGACTCCAGTTTCTTTTTCAC 60.128 38.462 0.00 0.00 0.00 3.18
216 217 5.943416 TGACTTGACTCCAGTTTCTTTTTCA 59.057 36.000 0.00 0.00 0.00 2.69
218 219 6.621613 GTTGACTTGACTCCAGTTTCTTTTT 58.378 36.000 0.00 0.00 0.00 1.94
219 220 5.163754 CGTTGACTTGACTCCAGTTTCTTTT 60.164 40.000 0.00 0.00 0.00 2.27
220 221 4.332819 CGTTGACTTGACTCCAGTTTCTTT 59.667 41.667 0.00 0.00 0.00 2.52
221 222 3.871594 CGTTGACTTGACTCCAGTTTCTT 59.128 43.478 0.00 0.00 0.00 2.52
223 224 3.195661 ACGTTGACTTGACTCCAGTTTC 58.804 45.455 0.00 0.00 0.00 2.78
224 225 3.195661 GACGTTGACTTGACTCCAGTTT 58.804 45.455 0.00 0.00 0.00 2.66
225 226 2.798499 CGACGTTGACTTGACTCCAGTT 60.798 50.000 0.00 0.00 0.00 3.16
229 2247 1.849097 AACGACGTTGACTTGACTCC 58.151 50.000 13.38 0.00 0.00 3.85
289 2307 0.248866 CACCACCTTGCAACCGTTTC 60.249 55.000 0.00 0.00 0.00 2.78
290 2308 1.813192 CACCACCTTGCAACCGTTT 59.187 52.632 0.00 0.00 0.00 3.60
293 2311 2.906897 AGCACCACCTTGCAACCG 60.907 61.111 0.00 0.00 45.62 4.44
315 2333 0.322816 TGGATCTGGGTTGCTTGCTC 60.323 55.000 0.00 0.00 0.00 4.26
369 2387 2.281484 TGGGTTGCTTGCTCGTCC 60.281 61.111 0.00 0.00 0.00 4.79
389 2407 1.539929 GCTGGAGAAGACGATGATGGG 60.540 57.143 0.00 0.00 0.00 4.00
411 2429 1.873863 CGTCGTAGCACTGACCTGA 59.126 57.895 0.00 0.00 0.00 3.86
423 2441 2.658373 TTAAGCAAGATGGCGTCGTA 57.342 45.000 0.13 0.00 39.27 3.43
505 2523 2.459060 TGATTTTAGCCAACCGTCGA 57.541 45.000 0.00 0.00 0.00 4.20
509 2527 5.811399 TCTTACATGATTTTAGCCAACCG 57.189 39.130 0.00 0.00 0.00 4.44
539 2557 1.123928 AAGGCGACTATGGAGGGAAG 58.876 55.000 0.00 0.00 42.68 3.46
544 2562 6.293626 CCAAAAATATCAAGGCGACTATGGAG 60.294 42.308 0.00 0.00 42.68 3.86
551 2569 4.082463 TGGAACCAAAAATATCAAGGCGAC 60.082 41.667 0.00 0.00 0.00 5.19
552 2570 4.082845 TGGAACCAAAAATATCAAGGCGA 58.917 39.130 0.00 0.00 0.00 5.54
553 2571 4.082245 ACTGGAACCAAAAATATCAAGGCG 60.082 41.667 0.00 0.00 0.00 5.52
554 2572 5.047377 TGACTGGAACCAAAAATATCAAGGC 60.047 40.000 0.00 0.00 0.00 4.35
555 2573 6.588719 TGACTGGAACCAAAAATATCAAGG 57.411 37.500 0.00 0.00 0.00 3.61
556 2574 9.143631 GATTTGACTGGAACCAAAAATATCAAG 57.856 33.333 0.00 0.00 36.10 3.02
557 2575 7.812191 CGATTTGACTGGAACCAAAAATATCAA 59.188 33.333 0.00 0.00 36.10 2.57
558 2576 7.312154 CGATTTGACTGGAACCAAAAATATCA 58.688 34.615 0.00 0.00 36.10 2.15
559 2577 6.253512 GCGATTTGACTGGAACCAAAAATATC 59.746 38.462 0.00 0.00 36.10 1.63
560 2578 6.071391 AGCGATTTGACTGGAACCAAAAATAT 60.071 34.615 0.00 0.00 36.10 1.28
561 2579 5.242838 AGCGATTTGACTGGAACCAAAAATA 59.757 36.000 0.00 0.00 36.10 1.40
562 2580 4.039124 AGCGATTTGACTGGAACCAAAAAT 59.961 37.500 0.00 7.87 36.10 1.82
563 2581 3.383185 AGCGATTTGACTGGAACCAAAAA 59.617 39.130 0.00 0.00 36.10 1.94
564 2582 2.955660 AGCGATTTGACTGGAACCAAAA 59.044 40.909 0.00 0.00 36.10 2.44
565 2583 2.552315 GAGCGATTTGACTGGAACCAAA 59.448 45.455 0.00 0.00 36.80 3.28
566 2584 2.151202 GAGCGATTTGACTGGAACCAA 58.849 47.619 0.00 0.00 0.00 3.67
567 2585 1.347707 AGAGCGATTTGACTGGAACCA 59.652 47.619 0.00 0.00 0.00 3.67
568 2586 2.003301 GAGAGCGATTTGACTGGAACC 58.997 52.381 0.00 0.00 0.00 3.62
569 2587 2.003301 GGAGAGCGATTTGACTGGAAC 58.997 52.381 0.00 0.00 0.00 3.62
570 2588 1.623311 TGGAGAGCGATTTGACTGGAA 59.377 47.619 0.00 0.00 0.00 3.53
571 2589 1.266178 TGGAGAGCGATTTGACTGGA 58.734 50.000 0.00 0.00 0.00 3.86
572 2590 2.322355 ATGGAGAGCGATTTGACTGG 57.678 50.000 0.00 0.00 0.00 4.00
573 2591 3.005554 ACAATGGAGAGCGATTTGACTG 58.994 45.455 0.00 0.00 0.00 3.51
583 2601 1.329906 CTTGATGCGACAATGGAGAGC 59.670 52.381 0.00 0.00 0.00 4.09
585 2603 3.461061 GATCTTGATGCGACAATGGAGA 58.539 45.455 0.00 0.00 0.00 3.71
597 2615 2.943690 CTGCTTGACCTGGATCTTGATG 59.056 50.000 0.00 0.00 0.00 3.07
613 2631 3.556843 GCAGAGGAAGAAGAAGACTGCTT 60.557 47.826 0.00 0.00 44.03 3.91
619 2637 5.559148 AGAAAAGCAGAGGAAGAAGAAGA 57.441 39.130 0.00 0.00 0.00 2.87
629 2647 1.811359 CTGGAGCAAGAAAAGCAGAGG 59.189 52.381 0.00 0.00 0.00 3.69
643 2661 0.394080 AAGAAGGCTGATGCTGGAGC 60.394 55.000 0.00 0.00 39.59 4.70
644 2662 1.209990 AGAAGAAGGCTGATGCTGGAG 59.790 52.381 0.00 0.00 39.59 3.86
645 2663 1.283347 AGAAGAAGGCTGATGCTGGA 58.717 50.000 0.00 0.00 39.59 3.86
646 2664 2.015587 GAAGAAGAAGGCTGATGCTGG 58.984 52.381 0.00 0.00 39.59 4.85
647 2665 2.015587 GGAAGAAGAAGGCTGATGCTG 58.984 52.381 0.00 0.00 39.59 4.41
648 2666 1.914798 AGGAAGAAGAAGGCTGATGCT 59.085 47.619 0.00 0.00 39.59 3.79
649 2667 2.093021 AGAGGAAGAAGAAGGCTGATGC 60.093 50.000 0.00 0.00 38.76 3.91
650 2668 3.533547 CAGAGGAAGAAGAAGGCTGATG 58.466 50.000 0.00 0.00 0.00 3.07
651 2669 2.093021 GCAGAGGAAGAAGAAGGCTGAT 60.093 50.000 0.00 0.00 0.00 2.90
652 2670 1.277557 GCAGAGGAAGAAGAAGGCTGA 59.722 52.381 0.00 0.00 0.00 4.26
653 2671 1.278699 AGCAGAGGAAGAAGAAGGCTG 59.721 52.381 0.00 0.00 0.00 4.85
654 2672 1.655372 AGCAGAGGAAGAAGAAGGCT 58.345 50.000 0.00 0.00 0.00 4.58
655 2673 2.488204 AAGCAGAGGAAGAAGAAGGC 57.512 50.000 0.00 0.00 0.00 4.35
656 2674 4.650734 AGAAAAGCAGAGGAAGAAGAAGG 58.349 43.478 0.00 0.00 0.00 3.46
657 2675 5.562501 GCAAGAAAAGCAGAGGAAGAAGAAG 60.563 44.000 0.00 0.00 0.00 2.85
658 2676 4.276926 GCAAGAAAAGCAGAGGAAGAAGAA 59.723 41.667 0.00 0.00 0.00 2.52
659 2677 3.817647 GCAAGAAAAGCAGAGGAAGAAGA 59.182 43.478 0.00 0.00 0.00 2.87
660 2678 3.819902 AGCAAGAAAAGCAGAGGAAGAAG 59.180 43.478 0.00 0.00 0.00 2.85
661 2679 3.817647 GAGCAAGAAAAGCAGAGGAAGAA 59.182 43.478 0.00 0.00 0.00 2.52
662 2680 3.406764 GAGCAAGAAAAGCAGAGGAAGA 58.593 45.455 0.00 0.00 0.00 2.87
663 2681 2.487372 GGAGCAAGAAAAGCAGAGGAAG 59.513 50.000 0.00 0.00 0.00 3.46
664 2682 2.508526 GGAGCAAGAAAAGCAGAGGAA 58.491 47.619 0.00 0.00 0.00 3.36
665 2683 1.609061 CGGAGCAAGAAAAGCAGAGGA 60.609 52.381 0.00 0.00 0.00 3.71
666 2684 0.801251 CGGAGCAAGAAAAGCAGAGG 59.199 55.000 0.00 0.00 0.00 3.69
667 2685 0.801251 CCGGAGCAAGAAAAGCAGAG 59.199 55.000 0.00 0.00 0.00 3.35
668 2686 1.237285 GCCGGAGCAAGAAAAGCAGA 61.237 55.000 5.05 0.00 39.53 4.26
669 2687 1.211190 GCCGGAGCAAGAAAAGCAG 59.789 57.895 5.05 0.00 39.53 4.24
670 2688 2.616330 CGCCGGAGCAAGAAAAGCA 61.616 57.895 5.05 0.00 39.83 3.91
671 2689 2.176792 CGCCGGAGCAAGAAAAGC 59.823 61.111 5.05 0.00 39.83 3.51
672 2690 2.870372 CCGCCGGAGCAAGAAAAG 59.130 61.111 5.05 0.00 39.83 2.27
673 2691 3.361977 GCCGCCGGAGCAAGAAAA 61.362 61.111 7.68 0.00 39.83 2.29
704 2722 1.307430 GAAGGAGAGGAAGGGGGCT 60.307 63.158 0.00 0.00 0.00 5.19
705 2723 2.379459 GGAAGGAGAGGAAGGGGGC 61.379 68.421 0.00 0.00 0.00 5.80
710 2728 0.459489 CGAGCAGGAAGGAGAGGAAG 59.541 60.000 0.00 0.00 0.00 3.46
711 2729 1.608717 GCGAGCAGGAAGGAGAGGAA 61.609 60.000 0.00 0.00 0.00 3.36
712 2730 2.055042 GCGAGCAGGAAGGAGAGGA 61.055 63.158 0.00 0.00 0.00 3.71
713 2731 2.498726 GCGAGCAGGAAGGAGAGG 59.501 66.667 0.00 0.00 0.00 3.69
714 2732 2.015227 GAGGCGAGCAGGAAGGAGAG 62.015 65.000 0.00 0.00 0.00 3.20
715 2733 2.038007 AGGCGAGCAGGAAGGAGA 59.962 61.111 0.00 0.00 0.00 3.71
716 2734 2.498726 GAGGCGAGCAGGAAGGAG 59.501 66.667 0.00 0.00 0.00 3.69
737 2755 1.592223 GGACAGGAACAGGACCTCG 59.408 63.158 0.00 0.00 35.35 4.63
738 2756 0.898789 TCGGACAGGAACAGGACCTC 60.899 60.000 0.00 0.00 35.35 3.85
746 2764 2.266055 CAGGGCTCGGACAGGAAC 59.734 66.667 0.00 0.00 0.00 3.62
803 2823 1.280746 CGTGGCAGCAAGTTGACTG 59.719 57.895 17.68 17.68 36.96 3.51
826 2862 4.065281 GACACCAGTACCGCGCCT 62.065 66.667 0.00 0.00 0.00 5.52
839 2875 2.603776 AGGGTGAGACGGGGACAC 60.604 66.667 0.00 0.00 0.00 3.67
840 2876 2.603473 CAGGGTGAGACGGGGACA 60.603 66.667 0.00 0.00 0.00 4.02
859 2895 0.320771 AGTCAGTTGCCACGCTAAGG 60.321 55.000 0.00 0.00 0.00 2.69
860 2896 0.792640 CAGTCAGTTGCCACGCTAAG 59.207 55.000 0.00 0.00 0.00 2.18
861 2897 0.391228 TCAGTCAGTTGCCACGCTAA 59.609 50.000 0.00 0.00 0.00 3.09
862 2898 0.319555 GTCAGTCAGTTGCCACGCTA 60.320 55.000 0.00 0.00 0.00 4.26
863 2899 1.595382 GTCAGTCAGTTGCCACGCT 60.595 57.895 0.00 0.00 0.00 5.07
864 2900 2.939022 GTCAGTCAGTTGCCACGC 59.061 61.111 0.00 0.00 0.00 5.34
866 2902 2.939022 GCGTCAGTCAGTTGCCAC 59.061 61.111 0.00 0.00 0.00 5.01
869 2905 4.077188 GCCGCGTCAGTCAGTTGC 62.077 66.667 4.92 0.00 0.00 4.17
870 2906 3.767230 CGCCGCGTCAGTCAGTTG 61.767 66.667 4.92 0.00 0.00 3.16
871 2907 2.964438 TTTCGCCGCGTCAGTCAGTT 62.964 55.000 13.39 0.00 0.00 3.16
872 2908 2.964438 TTTTCGCCGCGTCAGTCAGT 62.964 55.000 13.39 0.00 0.00 3.41
873 2909 1.827315 TTTTTCGCCGCGTCAGTCAG 61.827 55.000 13.39 0.00 0.00 3.51
881 2919 1.440353 CCTGAAGTTTTTCGCCGCG 60.440 57.895 6.39 6.39 36.04 6.46
908 2946 7.399523 CCATATAGTTTCTGCGTTTGTTACTC 58.600 38.462 0.00 0.00 0.00 2.59
913 2951 4.006989 TGCCATATAGTTTCTGCGTTTGT 58.993 39.130 0.00 0.00 0.00 2.83
921 2959 5.163405 ACGACTGATGTGCCATATAGTTTCT 60.163 40.000 0.00 0.00 0.00 2.52
933 2971 1.629013 TCGATCAACGACTGATGTGC 58.371 50.000 9.06 0.00 45.23 4.57
944 2982 1.672363 TGGAATGCAGCATCGATCAAC 59.328 47.619 8.77 0.00 0.00 3.18
949 2987 5.518848 AAATTAATGGAATGCAGCATCGA 57.481 34.783 8.77 0.25 0.00 3.59
955 2993 7.910441 AACAAGGAAAATTAATGGAATGCAG 57.090 32.000 0.00 0.00 0.00 4.41
958 2996 9.709495 TGAGAAACAAGGAAAATTAATGGAATG 57.291 29.630 0.00 0.00 0.00 2.67
961 2999 7.728083 TCCTGAGAAACAAGGAAAATTAATGGA 59.272 33.333 0.00 0.00 0.00 3.41
968 3006 5.066913 ACCTCCTGAGAAACAAGGAAAAT 57.933 39.130 0.00 0.00 32.51 1.82
969 3007 4.519906 ACCTCCTGAGAAACAAGGAAAA 57.480 40.909 0.00 0.00 32.51 2.29
970 3008 4.505039 GCTACCTCCTGAGAAACAAGGAAA 60.505 45.833 0.00 0.00 32.51 3.13
973 3011 2.355209 GGCTACCTCCTGAGAAACAAGG 60.355 54.545 0.00 0.00 33.89 3.61
974 3012 2.675317 CGGCTACCTCCTGAGAAACAAG 60.675 54.545 0.00 0.00 0.00 3.16
975 3013 1.275291 CGGCTACCTCCTGAGAAACAA 59.725 52.381 0.00 0.00 0.00 2.83
976 3014 0.895530 CGGCTACCTCCTGAGAAACA 59.104 55.000 0.00 0.00 0.00 2.83
977 3015 0.460459 GCGGCTACCTCCTGAGAAAC 60.460 60.000 0.00 0.00 0.00 2.78
980 3018 1.075970 ATGCGGCTACCTCCTGAGA 60.076 57.895 0.00 0.00 0.00 3.27
981 3019 1.365633 GATGCGGCTACCTCCTGAG 59.634 63.158 0.00 0.00 0.00 3.35
982 3020 0.760567 ATGATGCGGCTACCTCCTGA 60.761 55.000 0.00 0.00 0.00 3.86
983 3021 0.602106 CATGATGCGGCTACCTCCTG 60.602 60.000 0.00 0.00 0.00 3.86
984 3022 1.750930 CATGATGCGGCTACCTCCT 59.249 57.895 0.00 0.00 0.00 3.69
989 3070 5.643777 AGTTTAATATCCATGATGCGGCTAC 59.356 40.000 0.00 0.00 0.00 3.58
998 3079 6.724893 TCTCCACGAGTTTAATATCCATGA 57.275 37.500 0.00 0.00 0.00 3.07
1006 3087 4.113354 GCTTCGATCTCCACGAGTTTAAT 58.887 43.478 0.00 0.00 40.72 1.40
1015 3096 1.134699 TGTGATGGCTTCGATCTCCAC 60.135 52.381 3.37 0.00 31.94 4.02
1016 3097 1.194218 TGTGATGGCTTCGATCTCCA 58.806 50.000 3.73 3.73 0.00 3.86
1041 3122 3.312421 CGACTTTCTGTTCCTCTGCAAAA 59.688 43.478 0.00 0.00 0.00 2.44
1196 3313 1.160137 CGGCAACTTCCTCTCCTTTG 58.840 55.000 0.00 0.00 0.00 2.77
1209 3326 0.884704 TGGAGCTTCTTCACGGCAAC 60.885 55.000 0.00 0.00 0.00 4.17
1286 3403 3.366476 GCACAACATTTTGGTGGCGTATA 60.366 43.478 0.00 0.00 39.97 1.47
1376 3493 1.712081 CACGCGCTCCATCTCTTTG 59.288 57.895 5.73 0.00 0.00 2.77
1391 3508 3.181536 GCATATATTCGAAGCAGAGCACG 60.182 47.826 3.35 0.00 33.74 5.34
1446 3563 4.629200 GCAGGTCACAGAAGAGAGTTAATG 59.371 45.833 0.00 0.00 0.00 1.90
1452 3569 2.418471 GGATGCAGGTCACAGAAGAGAG 60.418 54.545 0.00 0.00 0.00 3.20
1520 3758 6.598525 TCATCTGCAATTACAAGTAAACACG 58.401 36.000 0.00 0.00 0.00 4.49
1566 3907 5.856455 CCCTTTGATGATTTTGTAACACGTC 59.144 40.000 0.00 0.00 0.00 4.34
1641 3982 5.435686 TGGCTGGTTTTATGTCTAGATGT 57.564 39.130 0.00 0.00 0.00 3.06
1790 4135 2.742053 TCATACAAGAACGAAGCAAGCC 59.258 45.455 0.00 0.00 0.00 4.35
1794 4139 4.627058 TCAAGTCATACAAGAACGAAGCA 58.373 39.130 0.00 0.00 0.00 3.91
1799 4144 6.346919 CCTCAGTTTCAAGTCATACAAGAACG 60.347 42.308 0.00 0.00 0.00 3.95
1810 4178 6.871044 GAAACAAAACCTCAGTTTCAAGTC 57.129 37.500 11.18 0.00 45.54 3.01
1815 4183 5.516696 GCAAGAGAAACAAAACCTCAGTTTC 59.483 40.000 8.71 8.71 45.54 2.78
1862 4236 5.366477 TGTACCCTCTGCAAGATATCATCAA 59.634 40.000 5.32 0.00 45.62 2.57
1873 4247 0.322456 GTGGCATGTACCCTCTGCAA 60.322 55.000 0.00 0.00 37.64 4.08
1914 4288 6.236017 ACACGTCAAATTTGTTCGATATGT 57.764 33.333 29.15 23.02 33.68 2.29
1927 4301 4.039032 CGCCAAAACTAAACACGTCAAAT 58.961 39.130 0.00 0.00 0.00 2.32
2029 4403 7.939784 ATCAACAGGGAGTATTTTTCTTACC 57.060 36.000 0.00 0.00 0.00 2.85
2041 4415 4.598036 ATTCATGGAATCAACAGGGAGT 57.402 40.909 0.00 0.00 0.00 3.85
2069 4664 7.465960 AGAGAGAGGCTGAGATGTATGTATAA 58.534 38.462 0.00 0.00 0.00 0.98
2070 4665 7.026697 AGAGAGAGGCTGAGATGTATGTATA 57.973 40.000 0.00 0.00 0.00 1.47
2072 4667 5.317600 AGAGAGAGGCTGAGATGTATGTA 57.682 43.478 0.00 0.00 0.00 2.29
2075 4670 6.347696 CAAAAAGAGAGAGGCTGAGATGTAT 58.652 40.000 0.00 0.00 0.00 2.29
2081 4676 2.617532 CCCCAAAAAGAGAGAGGCTGAG 60.618 54.545 0.00 0.00 0.00 3.35
2083 4678 1.615384 CCCCCAAAAAGAGAGAGGCTG 60.615 57.143 0.00 0.00 0.00 4.85
2084 4679 0.701147 CCCCCAAAAAGAGAGAGGCT 59.299 55.000 0.00 0.00 0.00 4.58
2086 4681 1.425448 ACACCCCCAAAAAGAGAGAGG 59.575 52.381 0.00 0.00 0.00 3.69
2087 4682 2.373502 AGACACCCCCAAAAAGAGAGAG 59.626 50.000 0.00 0.00 0.00 3.20
2088 4683 2.372172 GAGACACCCCCAAAAAGAGAGA 59.628 50.000 0.00 0.00 0.00 3.10
2089 4684 2.373502 AGAGACACCCCCAAAAAGAGAG 59.626 50.000 0.00 0.00 0.00 3.20
2090 4685 2.418669 AGAGACACCCCCAAAAAGAGA 58.581 47.619 0.00 0.00 0.00 3.10
2091 4686 2.959465 AGAGACACCCCCAAAAAGAG 57.041 50.000 0.00 0.00 0.00 2.85
2092 4687 2.158519 GGAAGAGACACCCCCAAAAAGA 60.159 50.000 0.00 0.00 0.00 2.52
2093 4688 2.239400 GGAAGAGACACCCCCAAAAAG 58.761 52.381 0.00 0.00 0.00 2.27
2094 4689 1.571457 TGGAAGAGACACCCCCAAAAA 59.429 47.619 0.00 0.00 0.00 1.94
2095 4690 1.227249 TGGAAGAGACACCCCCAAAA 58.773 50.000 0.00 0.00 0.00 2.44
2096 4691 1.144913 CTTGGAAGAGACACCCCCAAA 59.855 52.381 0.00 0.00 36.57 3.28
2099 4694 0.036875 CACTTGGAAGAGACACCCCC 59.963 60.000 0.00 0.00 0.00 5.40
2100 4695 0.765510 ACACTTGGAAGAGACACCCC 59.234 55.000 0.00 0.00 0.00 4.95
2101 4696 2.640316 AACACTTGGAAGAGACACCC 57.360 50.000 0.00 0.00 0.00 4.61
2102 4697 4.338379 ACTAACACTTGGAAGAGACACC 57.662 45.455 0.00 0.00 0.00 4.16
2103 4698 7.828712 AGTATACTAACACTTGGAAGAGACAC 58.171 38.462 2.75 0.00 0.00 3.67
2104 4699 7.889073 AGAGTATACTAACACTTGGAAGAGACA 59.111 37.037 5.09 0.00 0.00 3.41
2105 4700 8.283699 AGAGTATACTAACACTTGGAAGAGAC 57.716 38.462 5.09 0.00 0.00 3.36
2106 4701 9.616156 CTAGAGTATACTAACACTTGGAAGAGA 57.384 37.037 5.09 0.00 0.00 3.10
2107 4702 8.842280 CCTAGAGTATACTAACACTTGGAAGAG 58.158 40.741 5.09 0.00 35.89 2.85
2108 4703 8.554870 TCCTAGAGTATACTAACACTTGGAAGA 58.445 37.037 15.43 0.47 38.36 2.87
2109 4704 8.749026 TCCTAGAGTATACTAACACTTGGAAG 57.251 38.462 15.43 1.90 38.36 3.46
2110 4705 9.186837 CTTCCTAGAGTATACTAACACTTGGAA 57.813 37.037 22.28 22.28 43.69 3.53
2111 4706 7.284944 GCTTCCTAGAGTATACTAACACTTGGA 59.715 40.741 14.41 14.41 39.07 3.53
2112 4707 7.285858 AGCTTCCTAGAGTATACTAACACTTGG 59.714 40.741 5.09 9.07 35.44 3.61
2113 4708 8.228035 AGCTTCCTAGAGTATACTAACACTTG 57.772 38.462 5.09 0.00 0.00 3.16
2114 4709 8.826293 AAGCTTCCTAGAGTATACTAACACTT 57.174 34.615 5.09 0.00 0.00 3.16
2115 4710 8.826293 AAAGCTTCCTAGAGTATACTAACACT 57.174 34.615 5.09 1.14 0.00 3.55
2120 4715 7.361885 GCGCATAAAGCTTCCTAGAGTATACTA 60.362 40.741 5.09 0.00 42.61 1.82
2122 4717 5.573669 GCGCATAAAGCTTCCTAGAGTATAC 59.426 44.000 0.30 0.00 42.61 1.47
2123 4718 5.336531 GGCGCATAAAGCTTCCTAGAGTATA 60.337 44.000 10.83 0.00 42.61 1.47
2124 4719 4.561105 GCGCATAAAGCTTCCTAGAGTAT 58.439 43.478 0.30 0.00 42.61 2.12
2127 4722 2.139118 GGCGCATAAAGCTTCCTAGAG 58.861 52.381 10.83 0.00 42.61 2.43
2150 4746 7.807907 CCAGTTTTTAGTTACCTACATGCAAAG 59.192 37.037 0.00 0.00 0.00 2.77
2168 4765 2.899976 CAACCTTTTCGCCCAGTTTTT 58.100 42.857 0.00 0.00 0.00 1.94
2177 4774 0.944386 TCTGTCAGCAACCTTTTCGC 59.056 50.000 0.00 0.00 0.00 4.70
2190 4787 2.968574 GAGGAATATCCAGGCTCTGTCA 59.031 50.000 0.00 0.00 39.61 3.58
2236 4842 8.969121 TTAATGCAATTTCAACACATCTAGTG 57.031 30.769 0.00 0.00 45.41 2.74
2241 4847 8.377681 CACATCTTAATGCAATTTCAACACATC 58.622 33.333 0.00 0.00 37.87 3.06
2251 4857 5.981088 TGTCCACACATCTTAATGCAATT 57.019 34.783 0.00 0.00 41.28 2.32
2317 4923 1.827969 TCAGCTTCTAGTTCCTCCAGC 59.172 52.381 0.00 0.00 0.00 4.85
2341 4947 6.317391 GGTCAGAAGATAGGGACATTTTCTTG 59.683 42.308 0.00 0.00 29.44 3.02
2382 4991 0.964358 AAGGATGCTTGCCTGCAGAC 60.964 55.000 17.39 3.38 46.71 3.51
2408 5054 5.291971 AGCATTGCAAAACCTAGAACAAAG 58.708 37.500 11.91 0.00 0.00 2.77
2467 5226 2.175530 AACATCGCTACGTCGAGAAG 57.824 50.000 0.00 0.31 42.14 2.85
2470 5229 1.614385 ACAAACATCGCTACGTCGAG 58.386 50.000 0.00 0.00 42.14 4.04
2473 5232 2.274740 GTCGTACAAACATCGCTACGTC 59.725 50.000 0.00 0.00 34.82 4.34
2474 5233 2.245096 GTCGTACAAACATCGCTACGT 58.755 47.619 0.00 0.00 34.82 3.57
2497 5275 2.664402 AAGGAGTCAGTTGGTGCATT 57.336 45.000 0.00 0.00 0.00 3.56
2498 5276 4.307032 AATAAGGAGTCAGTTGGTGCAT 57.693 40.909 0.00 0.00 0.00 3.96
2507 5285 5.248640 TCTGCAAGGAAAATAAGGAGTCAG 58.751 41.667 0.00 0.00 0.00 3.51
2512 5290 4.702131 GCTTCTCTGCAAGGAAAATAAGGA 59.298 41.667 0.00 0.00 0.00 3.36
2513 5291 4.704057 AGCTTCTCTGCAAGGAAAATAAGG 59.296 41.667 0.00 0.00 34.99 2.69
2667 5449 5.389516 CCGCACACTATACTTGTTCTTGTTC 60.390 44.000 0.00 0.00 0.00 3.18
2712 5494 2.656069 ATAACGCCTGGAGCACGGT 61.656 57.895 0.00 0.00 44.04 4.83
2856 5651 4.169696 TTATCCGCCCTGGCCACG 62.170 66.667 0.00 3.77 37.80 4.94
2857 5652 2.203209 CTTATCCGCCCTGGCCAC 60.203 66.667 0.00 0.00 37.80 5.01
2864 5659 0.182775 ATCAACCACCTTATCCGCCC 59.817 55.000 0.00 0.00 0.00 6.13
2913 5989 4.641541 GGTGGAGGAGACTACTCTTCTAAC 59.358 50.000 14.53 5.76 44.93 2.34
2919 5995 1.286553 CCTGGTGGAGGAGACTACTCT 59.713 57.143 14.53 0.00 46.33 3.24
2920 5996 1.285373 TCCTGGTGGAGGAGACTACTC 59.715 57.143 6.09 6.09 46.96 2.59
2969 6049 6.413052 AGCACTGACTGAATCTATCAACATT 58.587 36.000 0.00 0.00 37.67 2.71
2970 6050 5.987098 AGCACTGACTGAATCTATCAACAT 58.013 37.500 0.00 0.00 37.67 2.71
2991 6071 4.800471 CCTTTCTCAAACAACAACTCAAGC 59.200 41.667 0.00 0.00 0.00 4.01
3020 6451 6.466413 CAGACGATCAACTAGACGTAAGAAAG 59.534 42.308 0.00 0.00 43.62 2.62
3025 6456 5.871524 AGTACAGACGATCAACTAGACGTAA 59.128 40.000 0.00 0.00 35.29 3.18
3026 6457 5.414360 AGTACAGACGATCAACTAGACGTA 58.586 41.667 0.00 0.00 35.29 3.57
3027 6458 4.252073 AGTACAGACGATCAACTAGACGT 58.748 43.478 0.00 0.00 36.94 4.34
3028 6459 4.861389 AGTACAGACGATCAACTAGACG 57.139 45.455 0.00 0.00 0.00 4.18
3029 6460 5.123502 TGGAAGTACAGACGATCAACTAGAC 59.876 44.000 0.00 0.00 0.00 2.59
3030 6461 5.250982 TGGAAGTACAGACGATCAACTAGA 58.749 41.667 0.00 0.00 0.00 2.43
3031 6462 5.562506 TGGAAGTACAGACGATCAACTAG 57.437 43.478 0.00 0.00 0.00 2.57
3032 6463 6.071560 ACAATGGAAGTACAGACGATCAACTA 60.072 38.462 0.00 0.00 0.00 2.24
3033 6464 5.171476 CAATGGAAGTACAGACGATCAACT 58.829 41.667 0.00 0.00 0.00 3.16
3035 6466 5.147330 ACAATGGAAGTACAGACGATCAA 57.853 39.130 0.00 0.00 0.00 2.57
3036 6467 4.801330 ACAATGGAAGTACAGACGATCA 57.199 40.909 0.00 0.00 0.00 2.92
3039 6470 4.951254 TCAAACAATGGAAGTACAGACGA 58.049 39.130 0.00 0.00 0.00 4.20
3040 6471 4.988540 TCTCAAACAATGGAAGTACAGACG 59.011 41.667 0.00 0.00 0.00 4.18
3041 6472 6.861065 TTCTCAAACAATGGAAGTACAGAC 57.139 37.500 0.00 0.00 0.00 3.51
3042 6473 6.486657 CCTTTCTCAAACAATGGAAGTACAGA 59.513 38.462 0.00 0.00 0.00 3.41
3043 6474 6.486657 TCCTTTCTCAAACAATGGAAGTACAG 59.513 38.462 0.00 0.00 0.00 2.74
3046 6477 6.601332 ACTCCTTTCTCAAACAATGGAAGTA 58.399 36.000 0.00 0.00 29.21 2.24
3047 6478 5.449553 ACTCCTTTCTCAAACAATGGAAGT 58.550 37.500 0.00 0.00 29.21 3.01
3048 6479 5.532406 TGACTCCTTTCTCAAACAATGGAAG 59.468 40.000 0.00 0.00 29.21 3.46
3050 6481 5.047566 TGACTCCTTTCTCAAACAATGGA 57.952 39.130 0.00 0.00 0.00 3.41
3051 6482 5.972107 ATGACTCCTTTCTCAAACAATGG 57.028 39.130 0.00 0.00 0.00 3.16
3052 6483 6.402550 CCGTATGACTCCTTTCTCAAACAATG 60.403 42.308 0.00 0.00 0.00 2.82
3055 6486 4.282449 TCCGTATGACTCCTTTCTCAAACA 59.718 41.667 0.00 0.00 0.00 2.83
3056 6487 4.817517 TCCGTATGACTCCTTTCTCAAAC 58.182 43.478 0.00 0.00 0.00 2.93
3057 6488 5.422331 AGATCCGTATGACTCCTTTCTCAAA 59.578 40.000 0.00 0.00 0.00 2.69
3059 6490 4.537751 AGATCCGTATGACTCCTTTCTCA 58.462 43.478 0.00 0.00 0.00 3.27
3060 6491 5.523438 AAGATCCGTATGACTCCTTTCTC 57.477 43.478 0.00 0.00 0.00 2.87
3061 6492 5.450688 CGAAAGATCCGTATGACTCCTTTCT 60.451 44.000 0.00 0.00 36.32 2.52
3062 6493 4.740695 CGAAAGATCCGTATGACTCCTTTC 59.259 45.833 0.00 0.00 35.77 2.62
3066 6497 2.361438 ACCGAAAGATCCGTATGACTCC 59.639 50.000 0.00 0.00 0.00 3.85
3068 6499 5.105635 TGTTTACCGAAAGATCCGTATGACT 60.106 40.000 0.00 0.00 0.00 3.41
3069 6500 5.104374 TGTTTACCGAAAGATCCGTATGAC 58.896 41.667 0.00 0.00 0.00 3.06
3071 6502 4.506654 CCTGTTTACCGAAAGATCCGTATG 59.493 45.833 0.00 0.00 0.00 2.39
3072 6503 4.161001 ACCTGTTTACCGAAAGATCCGTAT 59.839 41.667 0.00 0.00 0.00 3.06
3073 6504 3.511146 ACCTGTTTACCGAAAGATCCGTA 59.489 43.478 0.00 0.00 0.00 4.02
3074 6505 2.301009 ACCTGTTTACCGAAAGATCCGT 59.699 45.455 0.00 0.00 0.00 4.69
3076 6507 3.007635 CCACCTGTTTACCGAAAGATCC 58.992 50.000 0.00 0.00 0.00 3.36
3077 6508 3.933332 CTCCACCTGTTTACCGAAAGATC 59.067 47.826 0.00 0.00 0.00 2.75
3078 6509 3.868754 GCTCCACCTGTTTACCGAAAGAT 60.869 47.826 0.00 0.00 0.00 2.40
3079 6510 2.549349 GCTCCACCTGTTTACCGAAAGA 60.549 50.000 0.00 0.00 0.00 2.52
3081 6512 1.141254 TGCTCCACCTGTTTACCGAAA 59.859 47.619 0.00 0.00 0.00 3.46
3083 6514 0.759959 TTGCTCCACCTGTTTACCGA 59.240 50.000 0.00 0.00 0.00 4.69
3084 6515 1.821216 ATTGCTCCACCTGTTTACCG 58.179 50.000 0.00 0.00 0.00 4.02
3086 6517 5.001232 TGTTCTATTGCTCCACCTGTTTAC 58.999 41.667 0.00 0.00 0.00 2.01
3087 6518 5.001232 GTGTTCTATTGCTCCACCTGTTTA 58.999 41.667 0.00 0.00 0.00 2.01
3090 6521 2.290323 GGTGTTCTATTGCTCCACCTGT 60.290 50.000 0.00 0.00 41.83 4.00
3091 6522 2.359900 GGTGTTCTATTGCTCCACCTG 58.640 52.381 0.00 0.00 41.83 4.00
3093 6524 2.027192 TCAGGTGTTCTATTGCTCCACC 60.027 50.000 0.00 0.00 44.69 4.61
3094 6525 3.334583 TCAGGTGTTCTATTGCTCCAC 57.665 47.619 0.00 0.00 0.00 4.02
3095 6526 4.202461 ACTTTCAGGTGTTCTATTGCTCCA 60.202 41.667 0.00 0.00 0.00 3.86
3096 6527 4.154918 CACTTTCAGGTGTTCTATTGCTCC 59.845 45.833 0.00 0.00 33.04 4.70
3097 6528 4.378874 GCACTTTCAGGTGTTCTATTGCTC 60.379 45.833 0.00 0.00 39.21 4.26
3098 6529 3.503748 GCACTTTCAGGTGTTCTATTGCT 59.496 43.478 0.00 0.00 39.21 3.91
3099 6530 3.667960 CGCACTTTCAGGTGTTCTATTGC 60.668 47.826 0.00 0.00 39.21 3.56
3100 6531 3.120199 CCGCACTTTCAGGTGTTCTATTG 60.120 47.826 0.00 0.00 39.21 1.90
3101 6532 3.074412 CCGCACTTTCAGGTGTTCTATT 58.926 45.455 0.00 0.00 39.21 1.73
3102 6533 2.038557 ACCGCACTTTCAGGTGTTCTAT 59.961 45.455 0.00 0.00 39.21 1.98
3103 6534 1.414919 ACCGCACTTTCAGGTGTTCTA 59.585 47.619 0.00 0.00 39.21 2.10
3104 6535 0.180406 ACCGCACTTTCAGGTGTTCT 59.820 50.000 0.00 0.00 39.21 3.01
3105 6536 1.873698 TACCGCACTTTCAGGTGTTC 58.126 50.000 0.00 0.00 38.90 3.18
3106 6537 2.561478 ATACCGCACTTTCAGGTGTT 57.439 45.000 0.00 0.00 38.90 3.32
3107 6538 3.906720 ATATACCGCACTTTCAGGTGT 57.093 42.857 0.00 0.00 38.90 4.16
3109 6540 7.159372 CCTATTTATATACCGCACTTTCAGGT 58.841 38.462 0.00 0.00 41.73 4.00
3110 6541 7.159372 ACCTATTTATATACCGCACTTTCAGG 58.841 38.462 0.00 0.00 0.00 3.86
3112 6543 8.090214 GGTACCTATTTATATACCGCACTTTCA 58.910 37.037 4.06 0.00 0.00 2.69
3114 6545 8.198807 AGGTACCTATTTATATACCGCACTTT 57.801 34.615 14.41 0.00 41.71 2.66
3116 6547 7.066284 CGTAGGTACCTATTTATATACCGCACT 59.934 40.741 24.36 0.00 41.71 4.40
3117 6548 7.189512 CGTAGGTACCTATTTATATACCGCAC 58.810 42.308 24.36 8.14 41.71 5.34
3121 6552 8.744568 AGAGCGTAGGTACCTATTTATATACC 57.255 38.462 24.36 7.53 39.88 2.73
3125 6556 8.386264 AGGTTAGAGCGTAGGTACCTATTTATA 58.614 37.037 24.36 11.57 41.97 0.98
3126 6557 7.237255 AGGTTAGAGCGTAGGTACCTATTTAT 58.763 38.462 24.36 12.47 41.97 1.40
3127 6558 6.605119 AGGTTAGAGCGTAGGTACCTATTTA 58.395 40.000 24.36 6.09 41.97 1.40
3128 6559 5.453158 AGGTTAGAGCGTAGGTACCTATTT 58.547 41.667 24.36 12.86 41.97 1.40
3129 6560 5.059134 AGGTTAGAGCGTAGGTACCTATT 57.941 43.478 24.36 13.20 41.97 1.73
3130 6561 4.720775 AGGTTAGAGCGTAGGTACCTAT 57.279 45.455 24.36 9.11 41.97 2.57
3131 6562 4.510167 AAGGTTAGAGCGTAGGTACCTA 57.490 45.455 18.10 18.10 42.82 3.08
3132 6563 3.378861 AAGGTTAGAGCGTAGGTACCT 57.621 47.619 20.57 20.57 45.17 3.08
3133 6564 4.203226 ACTAAGGTTAGAGCGTAGGTACC 58.797 47.826 2.73 2.73 39.88 3.34
3135 6566 7.735917 TGTATACTAAGGTTAGAGCGTAGGTA 58.264 38.462 4.17 0.00 39.88 3.08
3137 6568 7.684937 ATGTATACTAAGGTTAGAGCGTAGG 57.315 40.000 4.17 0.00 33.13 3.18
3141 6572 9.776158 CTCATAATGTATACTAAGGTTAGAGCG 57.224 37.037 4.17 0.00 34.84 5.03
3142 6573 9.575783 GCTCATAATGTATACTAAGGTTAGAGC 57.424 37.037 4.17 8.79 35.18 4.09
3143 6574 9.776158 CGCTCATAATGTATACTAAGGTTAGAG 57.224 37.037 4.17 3.32 34.84 2.43
3144 6575 8.737175 CCGCTCATAATGTATACTAAGGTTAGA 58.263 37.037 4.17 0.00 34.84 2.10
3145 6576 7.488471 GCCGCTCATAATGTATACTAAGGTTAG 59.512 40.741 4.17 0.00 36.82 2.34
3147 6578 6.164176 GCCGCTCATAATGTATACTAAGGTT 58.836 40.000 4.17 0.00 0.00 3.50
3148 6579 5.245301 TGCCGCTCATAATGTATACTAAGGT 59.755 40.000 4.17 0.00 0.00 3.50
3149 6580 5.577164 GTGCCGCTCATAATGTATACTAAGG 59.423 44.000 4.17 0.00 0.00 2.69
3151 6582 5.011227 TGGTGCCGCTCATAATGTATACTAA 59.989 40.000 4.17 0.00 0.00 2.24
3152 6583 4.525100 TGGTGCCGCTCATAATGTATACTA 59.475 41.667 4.17 0.00 0.00 1.82
3153 6584 3.323691 TGGTGCCGCTCATAATGTATACT 59.676 43.478 4.17 0.00 0.00 2.12
3155 6586 4.314961 CTTGGTGCCGCTCATAATGTATA 58.685 43.478 0.00 0.00 0.00 1.47
3156 6587 2.928801 TGGTGCCGCTCATAATGTAT 57.071 45.000 0.00 0.00 0.00 2.29
3157 6588 2.560504 CTTGGTGCCGCTCATAATGTA 58.439 47.619 0.00 0.00 0.00 2.29
3158 6589 1.382522 CTTGGTGCCGCTCATAATGT 58.617 50.000 0.00 0.00 0.00 2.71
3159 6590 0.664761 CCTTGGTGCCGCTCATAATG 59.335 55.000 0.00 0.00 0.00 1.90
3160 6591 0.546122 TCCTTGGTGCCGCTCATAAT 59.454 50.000 0.00 0.00 0.00 1.28
3161 6592 0.326595 TTCCTTGGTGCCGCTCATAA 59.673 50.000 0.00 0.00 0.00 1.90
3162 6593 0.326595 TTTCCTTGGTGCCGCTCATA 59.673 50.000 0.00 0.00 0.00 2.15
3164 6595 1.152860 TTTTCCTTGGTGCCGCTCA 60.153 52.632 0.00 0.00 0.00 4.26
3165 6596 0.889186 TCTTTTCCTTGGTGCCGCTC 60.889 55.000 0.00 0.00 0.00 5.03
3166 6597 1.150536 TCTTTTCCTTGGTGCCGCT 59.849 52.632 0.00 0.00 0.00 5.52
3167 6598 1.285950 GTCTTTTCCTTGGTGCCGC 59.714 57.895 0.00 0.00 0.00 6.53
3168 6599 1.247567 ATGTCTTTTCCTTGGTGCCG 58.752 50.000 0.00 0.00 0.00 5.69
3169 6600 2.755103 CCTATGTCTTTTCCTTGGTGCC 59.245 50.000 0.00 0.00 0.00 5.01
3170 6601 3.686016 TCCTATGTCTTTTCCTTGGTGC 58.314 45.455 0.00 0.00 0.00 5.01
3171 6602 6.840780 AATTCCTATGTCTTTTCCTTGGTG 57.159 37.500 0.00 0.00 0.00 4.17
3173 6604 7.500559 CCTCTAATTCCTATGTCTTTTCCTTGG 59.499 40.741 0.00 0.00 0.00 3.61
3174 6605 7.500559 CCCTCTAATTCCTATGTCTTTTCCTTG 59.499 40.741 0.00 0.00 0.00 3.61
3175 6606 7.184753 ACCCTCTAATTCCTATGTCTTTTCCTT 59.815 37.037 0.00 0.00 0.00 3.36
3177 6608 6.901300 ACCCTCTAATTCCTATGTCTTTTCC 58.099 40.000 0.00 0.00 0.00 3.13
3178 6609 8.151596 CCTACCCTCTAATTCCTATGTCTTTTC 58.848 40.741 0.00 0.00 0.00 2.29
3179 6610 7.420330 GCCTACCCTCTAATTCCTATGTCTTTT 60.420 40.741 0.00 0.00 0.00 2.27
3180 6611 6.043358 GCCTACCCTCTAATTCCTATGTCTTT 59.957 42.308 0.00 0.00 0.00 2.52
3182 6613 5.088026 GCCTACCCTCTAATTCCTATGTCT 58.912 45.833 0.00 0.00 0.00 3.41
3184 6615 4.168883 GGCCTACCCTCTAATTCCTATGT 58.831 47.826 0.00 0.00 0.00 2.29
3185 6616 3.195825 CGGCCTACCCTCTAATTCCTATG 59.804 52.174 0.00 0.00 0.00 2.23
3186 6617 3.181409 ACGGCCTACCCTCTAATTCCTAT 60.181 47.826 0.00 0.00 0.00 2.57
3189 6620 1.070289 CACGGCCTACCCTCTAATTCC 59.930 57.143 0.00 0.00 0.00 3.01
3190 6621 1.761198 ACACGGCCTACCCTCTAATTC 59.239 52.381 0.00 0.00 0.00 2.17
3191 6622 1.875488 ACACGGCCTACCCTCTAATT 58.125 50.000 0.00 0.00 0.00 1.40
3192 6623 2.091444 ACTACACGGCCTACCCTCTAAT 60.091 50.000 0.00 0.00 0.00 1.73
3193 6624 1.285962 ACTACACGGCCTACCCTCTAA 59.714 52.381 0.00 0.00 0.00 2.10
3194 6625 0.921896 ACTACACGGCCTACCCTCTA 59.078 55.000 0.00 0.00 0.00 2.43
3195 6626 0.040794 AACTACACGGCCTACCCTCT 59.959 55.000 0.00 0.00 0.00 3.69
3196 6627 0.459078 GAACTACACGGCCTACCCTC 59.541 60.000 0.00 0.00 0.00 4.30
3197 6628 0.251922 TGAACTACACGGCCTACCCT 60.252 55.000 0.00 0.00 0.00 4.34
3198 6629 0.108472 GTGAACTACACGGCCTACCC 60.108 60.000 0.00 0.00 39.78 3.69
3199 6630 3.430779 GTGAACTACACGGCCTACC 57.569 57.895 0.00 0.00 39.78 3.18
3209 6640 8.922676 TCTCGATTGTTAGAAATTGTGAACTAC 58.077 33.333 0.00 0.00 0.00 2.73
3210 6641 8.922676 GTCTCGATTGTTAGAAATTGTGAACTA 58.077 33.333 0.00 0.00 29.59 2.24
3212 6643 7.015877 GGTCTCGATTGTTAGAAATTGTGAAC 58.984 38.462 0.00 0.00 29.59 3.18
3213 6644 6.934645 AGGTCTCGATTGTTAGAAATTGTGAA 59.065 34.615 0.00 0.00 29.59 3.18
3215 6646 6.591834 AGAGGTCTCGATTGTTAGAAATTGTG 59.408 38.462 0.00 0.00 34.09 3.33
3216 6647 6.591834 CAGAGGTCTCGATTGTTAGAAATTGT 59.408 38.462 0.00 0.00 34.09 2.71
3218 6649 6.070767 TCCAGAGGTCTCGATTGTTAGAAATT 60.071 38.462 0.00 0.00 34.09 1.82
3221 6652 4.341487 TCCAGAGGTCTCGATTGTTAGAA 58.659 43.478 0.00 0.00 34.09 2.10
3223 6654 4.927978 ATCCAGAGGTCTCGATTGTTAG 57.072 45.455 0.00 0.00 34.09 2.34
3225 6656 4.956700 TCTTATCCAGAGGTCTCGATTGTT 59.043 41.667 0.00 0.00 34.09 2.83
3226 6657 4.537751 TCTTATCCAGAGGTCTCGATTGT 58.462 43.478 0.00 0.00 34.09 2.71
3227 6658 5.521906 TTCTTATCCAGAGGTCTCGATTG 57.478 43.478 0.00 0.00 31.12 2.67
3232 9220 6.928492 GTCATCATTTCTTATCCAGAGGTCTC 59.072 42.308 0.00 0.00 31.12 3.36
3237 9225 6.820152 TGTGTGTCATCATTTCTTATCCAGAG 59.180 38.462 0.00 0.00 31.12 3.35
3239 9227 6.990341 TGTGTGTCATCATTTCTTATCCAG 57.010 37.500 0.00 0.00 0.00 3.86
3315 9303 4.499526 GCACTTTTCAACATGGTGATGACA 60.500 41.667 15.62 0.00 28.62 3.58
3317 9305 3.635836 TGCACTTTTCAACATGGTGATGA 59.364 39.130 15.62 3.58 33.36 2.92
3446 9441 4.570369 TGTGAAACTGATATGTGTATGCGG 59.430 41.667 0.00 0.00 38.04 5.69
3485 9480 1.686355 TCGGGCAGTGTGTGATTTTT 58.314 45.000 0.00 0.00 0.00 1.94
3530 9525 0.804989 CTGTCCTTTGCCGATGTTCC 59.195 55.000 0.00 0.00 0.00 3.62
3641 9636 2.898729 TCATTCTGATCGGGAGAAGC 57.101 50.000 0.62 0.00 45.37 3.86
3678 9674 4.710528 AACTTCTACTCGCGAAAACAAG 57.289 40.909 11.33 12.56 0.00 3.16
3737 9776 2.954318 CCGATCCCATCTTTTCTGCATT 59.046 45.455 0.00 0.00 0.00 3.56


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.