Multiple sequence alignment - TraesCS2B01G029300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G029300 chr2B 100.000 4343 0 0 1 4343 13421723 13417381 0.000000e+00 8021.0
1 TraesCS2B01G029300 chr2B 79.592 245 35 10 488 722 13425181 13425420 1.250000e-35 161.0
2 TraesCS2B01G029300 chr2B 79.592 245 35 10 488 722 13427669 13427908 1.250000e-35 161.0
3 TraesCS2B01G029300 chr2D 89.481 1350 94 18 2326 3628 9907781 9906433 0.000000e+00 1663.0
4 TraesCS2B01G029300 chr2D 92.659 613 42 2 1704 2316 9913201 9912592 0.000000e+00 880.0
5 TraesCS2B01G029300 chr2D 86.481 466 37 8 452 895 9913906 9913445 5.050000e-134 488.0
6 TraesCS2B01G029300 chr2D 93.789 322 20 0 1704 2025 10140002 10140323 6.530000e-133 484.0
7 TraesCS2B01G029300 chr2D 81.574 521 78 10 2488 2991 10140423 10140942 8.690000e-112 414.0
8 TraesCS2B01G029300 chr2D 88.571 105 6 4 3627 3725 9906340 9906236 5.900000e-24 122.0
9 TraesCS2B01G029300 chr2D 87.755 98 10 2 1 97 9915665 9915569 3.550000e-21 113.0
10 TraesCS2B01G029300 chr2D 91.765 85 0 1 937 1021 9913338 9913261 1.280000e-20 111.0
11 TraesCS2B01G029300 chr2D 78.804 184 22 8 313 484 423863809 423863987 1.650000e-19 108.0
12 TraesCS2B01G029300 chr2D 88.732 71 5 3 414 484 15837037 15837104 2.780000e-12 84.2
13 TraesCS2B01G029300 chr7A 81.130 938 156 14 939 1874 7290886 7291804 0.000000e+00 732.0
14 TraesCS2B01G029300 chr7A 89.723 253 18 3 3808 4060 575615009 575614765 2.520000e-82 316.0
15 TraesCS2B01G029300 chr7A 90.476 105 5 1 4244 4343 575611959 575611855 2.720000e-27 134.0
16 TraesCS2B01G029300 chr7A 80.741 135 20 3 4079 4213 5719516 5719644 2.760000e-17 100.0
17 TraesCS2B01G029300 chr7A 96.667 60 2 0 4074 4133 575613913 575613854 2.760000e-17 100.0
18 TraesCS2B01G029300 chr3B 92.885 253 18 0 3808 4060 681511525 681511777 6.860000e-98 368.0
19 TraesCS2B01G029300 chr3B 95.210 167 7 1 4074 4240 681512016 681512181 3.330000e-66 263.0
20 TraesCS2B01G029300 chr3B 88.024 167 10 4 3894 4060 757252023 757251867 5.730000e-44 189.0
21 TraesCS2B01G029300 chr3B 98.529 68 1 0 4276 4343 681515755 681515822 2.120000e-23 121.0
22 TraesCS2B01G029300 chr3B 81.148 122 17 5 3811 3929 558106543 558106425 4.620000e-15 93.5
23 TraesCS2B01G029300 chr3B 100.000 44 0 0 4241 4284 681513340 681513383 1.000000e-11 82.4
24 TraesCS2B01G029300 chr1D 92.095 253 19 1 3808 4060 415685131 415685382 5.340000e-94 355.0
25 TraesCS2B01G029300 chr1D 92.814 167 11 1 4074 4240 415685621 415685786 1.560000e-59 241.0
26 TraesCS2B01G029300 chr3A 91.700 253 20 1 3808 4060 640633119 640633370 2.490000e-92 350.0
27 TraesCS2B01G029300 chr3A 93.909 197 12 0 3864 4060 640685830 640686026 9.130000e-77 298.0
28 TraesCS2B01G029300 chr3A 97.006 167 5 0 4074 4240 640686264 640686430 9.200000e-72 281.0
29 TraesCS2B01G029300 chr3A 96.407 167 6 0 4074 4240 640703021 640703187 4.280000e-70 276.0
30 TraesCS2B01G029300 chr3A 95.210 167 8 0 4074 4240 640633609 640633775 9.260000e-67 265.0
31 TraesCS2B01G029300 chr3A 98.058 103 2 0 4241 4343 640743197 640743299 3.450000e-41 180.0
32 TraesCS2B01G029300 chr3A 97.087 103 3 0 4241 4343 640672104 640672206 1.610000e-39 174.0
33 TraesCS2B01G029300 chr3A 83.750 80 9 3 409 487 9516944 9517020 6.020000e-09 73.1
34 TraesCS2B01G029300 chr5D 91.429 105 4 1 4244 4343 382513060 382512956 5.860000e-29 139.0
35 TraesCS2B01G029300 chr5D 94.937 79 4 0 4074 4152 382516943 382516865 1.640000e-24 124.0
36 TraesCS2B01G029300 chrUn 90.476 105 5 1 4244 4343 328256155 328256051 2.720000e-27 134.0
37 TraesCS2B01G029300 chr5A 84.091 132 17 4 3808 3938 669769091 669768963 1.640000e-24 124.0
38 TraesCS2B01G029300 chr5B 87.037 108 11 3 3805 3911 18676288 18676393 7.630000e-23 119.0
39 TraesCS2B01G029300 chr3D 94.203 69 4 0 412 480 164398508 164398440 5.940000e-19 106.0
40 TraesCS2B01G029300 chr1B 83.178 107 16 2 3805 3910 6758917 6759022 3.570000e-16 97.1
41 TraesCS2B01G029300 chr1B 100.000 30 0 0 454 483 642765146 642765175 6.070000e-04 56.5
42 TraesCS2B01G029300 chr4B 78.571 112 22 2 3801 3911 5828914 5829024 6.020000e-09 73.1
43 TraesCS2B01G029300 chr4B 82.895 76 11 2 414 487 527672870 527672945 2.800000e-07 67.6
44 TraesCS2B01G029300 chr6B 77.778 117 22 4 3066 3180 3625466 3625580 7.790000e-08 69.4
45 TraesCS2B01G029300 chr6D 79.592 98 16 4 3069 3164 2354483 2354388 2.800000e-07 67.6
46 TraesCS2B01G029300 chr1A 83.333 72 10 2 412 482 575873564 575873494 1.010000e-06 65.8
47 TraesCS2B01G029300 chr4D 100.000 29 0 0 454 482 449965298 449965326 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G029300 chr2B 13417381 13421723 4342 True 8021.0 8021 100.0000 1 4343 1 chr2B.!!$R1 4342
1 TraesCS2B01G029300 chr2D 9906236 9907781 1545 True 892.5 1663 89.0260 2326 3725 2 chr2D.!!$R1 1399
2 TraesCS2B01G029300 chr2D 10140002 10140942 940 False 449.0 484 87.6815 1704 2991 2 chr2D.!!$F3 1287
3 TraesCS2B01G029300 chr2D 9912592 9915665 3073 True 398.0 880 89.6650 1 2316 4 chr2D.!!$R2 2315
4 TraesCS2B01G029300 chr7A 7290886 7291804 918 False 732.0 732 81.1300 939 1874 1 chr7A.!!$F2 935
5 TraesCS2B01G029300 chr3B 681511525 681515822 4297 False 208.6 368 96.6560 3808 4343 4 chr3B.!!$F1 535
6 TraesCS2B01G029300 chr1D 415685131 415685786 655 False 298.0 355 92.4545 3808 4240 2 chr1D.!!$F1 432
7 TraesCS2B01G029300 chr3A 640633119 640633775 656 False 307.5 350 93.4550 3808 4240 2 chr3A.!!$F5 432
8 TraesCS2B01G029300 chr3A 640685830 640686430 600 False 289.5 298 95.4575 3864 4240 2 chr3A.!!$F6 376

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
446 524 0.031721 ATTTACTCCGCCGGATCGTC 59.968 55.0 6.16 0.00 0.00 4.20 F
1474 2887 0.035056 CCTCATGTTCACCCTGGGTC 60.035 60.0 17.46 5.67 31.02 4.46 F
2511 3954 0.036388 CCCTAAAGAGACAAGCGGCA 60.036 55.0 1.45 0.00 0.00 5.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2029 3460 0.106708 AGCGAACAGTGAAGAAGCCA 59.893 50.0 0.00 0.0 0.00 4.75 R
2968 4427 0.177604 CATCTGTCCTGGTGCTCCTC 59.822 60.0 6.34 0.0 34.23 3.71 R
3799 5392 0.102663 GAGGCTTGGGTACTACTCGC 59.897 60.0 0.00 0.0 0.00 5.03 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
48 49 1.516423 GACCAGTCGAACTAGCCCC 59.484 63.158 0.00 0.00 0.00 5.80
52 53 1.077212 AGTCGAACTAGCCCCGCTA 60.077 57.895 0.00 0.00 40.44 4.26
59 60 2.443390 TAGCCCCGCTACCCTCAC 60.443 66.667 0.00 0.00 40.44 3.51
62 63 3.470888 CCCCGCTACCCTCACCAG 61.471 72.222 0.00 0.00 0.00 4.00
63 64 2.363795 CCCGCTACCCTCACCAGA 60.364 66.667 0.00 0.00 0.00 3.86
71 72 0.608640 ACCCTCACCAGAATGACGAC 59.391 55.000 0.00 0.00 39.69 4.34
73 74 1.276421 CCCTCACCAGAATGACGACTT 59.724 52.381 0.00 0.00 39.69 3.01
82 83 5.047306 ACCAGAATGACGACTTGATTAGACA 60.047 40.000 0.00 0.00 39.69 3.41
86 129 8.788919 CAGAATGACGACTTGATTAGACAAGGG 61.789 44.444 12.00 6.75 44.54 3.95
109 152 2.889045 AGTCTACCTGTAGAACGTGCAA 59.111 45.455 8.53 0.00 43.12 4.08
110 153 3.319972 AGTCTACCTGTAGAACGTGCAAA 59.680 43.478 8.53 0.00 43.12 3.68
126 169 7.623268 ACGTGCAAATTTTCTGAAGTTAATC 57.377 32.000 0.00 0.00 0.00 1.75
155 198 1.963172 AAGGTCCTCGTGGTTTGTTC 58.037 50.000 2.99 0.00 34.23 3.18
174 217 3.057969 TCAAAAGATCCGTCAGCATGT 57.942 42.857 0.00 0.00 37.40 3.21
186 229 2.093869 GTCAGCATGTCCCATGCAAAAT 60.094 45.455 25.85 7.28 46.77 1.82
187 230 3.130869 GTCAGCATGTCCCATGCAAAATA 59.869 43.478 25.85 7.97 46.77 1.40
188 231 3.962063 TCAGCATGTCCCATGCAAAATAT 59.038 39.130 25.85 6.32 46.77 1.28
216 260 6.704050 TGCTTCATTCATCATTATGCATTTGG 59.296 34.615 3.54 0.00 32.76 3.28
220 264 9.451002 TTCATTCATCATTATGCATTTGGTTTT 57.549 25.926 3.54 0.00 32.76 2.43
244 288 3.305177 TTAGCGGAAGGTGACGGGC 62.305 63.158 0.00 0.00 44.53 6.13
273 317 2.294512 GCTGGTGGAACAAGGAGAAAAG 59.705 50.000 0.00 0.00 44.16 2.27
295 339 4.147449 CCATCCTCGCCGAGCACA 62.147 66.667 9.01 0.00 0.00 4.57
310 354 4.742201 ACAAGCGCGACGGCAGAT 62.742 61.111 12.10 0.00 39.92 2.90
323 367 2.270205 CAGATGCCAGCGTTCCCT 59.730 61.111 0.00 0.00 0.00 4.20
333 377 2.047274 CGTTCCCTGCGTGGTCAT 60.047 61.111 0.00 0.00 0.00 3.06
337 381 0.327924 TTCCCTGCGTGGTCATCATT 59.672 50.000 0.00 0.00 0.00 2.57
341 385 0.371301 CTGCGTGGTCATCATTGTCG 59.629 55.000 0.00 0.00 0.00 4.35
344 388 0.795698 CGTGGTCATCATTGTCGCAA 59.204 50.000 0.00 0.00 0.00 4.85
352 396 0.957362 TCATTGTCGCAACATGGCAA 59.043 45.000 0.00 0.00 34.73 4.52
355 399 1.780806 TTGTCGCAACATGGCAAATG 58.219 45.000 0.00 0.00 34.73 2.32
368 412 3.252400 TGGCAAATGTTCGATGAAATGC 58.748 40.909 4.90 4.90 0.00 3.56
369 413 3.252400 GGCAAATGTTCGATGAAATGCA 58.748 40.909 12.88 0.00 0.00 3.96
370 414 3.866910 GGCAAATGTTCGATGAAATGCAT 59.133 39.130 12.88 0.00 40.77 3.96
374 421 6.896088 GCAAATGTTCGATGAAATGCATAAAC 59.104 34.615 0.00 0.00 37.34 2.01
376 423 4.657055 TGTTCGATGAAATGCATAAACCG 58.343 39.130 0.00 0.74 37.34 4.44
381 428 6.027131 TCGATGAAATGCATAAACCGAAAAG 58.973 36.000 0.00 0.00 37.34 2.27
385 432 7.861176 TGAAATGCATAAACCGAAAAGTAAC 57.139 32.000 0.00 0.00 0.00 2.50
394 441 9.807386 CATAAACCGAAAAGTAACTTTACTCTG 57.193 33.333 2.13 0.00 42.86 3.35
398 445 8.947055 ACCGAAAAGTAACTTTACTCTGTTAA 57.053 30.769 2.13 0.00 42.86 2.01
426 504 5.030820 AGGGCTACAAATACTCCACTAAGT 58.969 41.667 0.00 0.00 0.00 2.24
444 522 1.268899 AGTATTTACTCCGCCGGATCG 59.731 52.381 6.16 0.00 0.00 3.69
445 523 1.000938 GTATTTACTCCGCCGGATCGT 60.001 52.381 6.16 4.52 0.00 3.73
446 524 0.031721 ATTTACTCCGCCGGATCGTC 59.968 55.000 6.16 0.00 0.00 4.20
447 525 2.008268 TTTACTCCGCCGGATCGTCC 62.008 60.000 6.16 0.00 0.00 4.79
490 1799 6.016777 GGTTAGAAATGCCCTAACATGATGAG 60.017 42.308 0.00 0.00 44.63 2.90
540 1849 1.336240 GCACTTGCATTGAACCCACTC 60.336 52.381 0.00 0.00 41.59 3.51
565 1874 2.159254 GCAAGTGGCACTGTGAAGAAAA 60.159 45.455 22.83 0.00 43.97 2.29
585 1894 9.914131 AAGAAAACTAAGGATAATTGTTTCTGC 57.086 29.630 0.00 0.00 31.54 4.26
589 1898 9.696917 AAACTAAGGATAATTGTTTCTGCTTTG 57.303 29.630 0.00 0.00 0.00 2.77
591 1900 6.916360 AAGGATAATTGTTTCTGCTTTGGA 57.084 33.333 0.00 0.00 0.00 3.53
603 1912 3.084039 CTGCTTTGGAGGCAAAGTGATA 58.916 45.455 0.00 0.00 42.44 2.15
604 1913 3.698040 CTGCTTTGGAGGCAAAGTGATAT 59.302 43.478 0.00 0.00 42.44 1.63
608 1917 5.163478 GCTTTGGAGGCAAAGTGATATCATT 60.163 40.000 9.02 0.99 42.44 2.57
630 1939 9.752228 TCATTAAGCATGAATATAATGGCCTTA 57.248 29.630 3.32 0.19 39.11 2.69
675 1984 4.770795 ACAATATGGGTAGCTTCACTGAC 58.229 43.478 0.00 0.00 0.00 3.51
695 2004 0.325272 TGCCGCAACAACCTGGTATA 59.675 50.000 0.00 0.00 0.00 1.47
696 2005 0.730840 GCCGCAACAACCTGGTATAC 59.269 55.000 0.00 0.00 0.00 1.47
697 2006 1.946747 GCCGCAACAACCTGGTATACA 60.947 52.381 0.00 0.00 0.00 2.29
703 2012 5.506649 CGCAACAACCTGGTATACAAAGTTT 60.507 40.000 0.00 0.00 0.00 2.66
716 2025 2.224606 CAAAGTTTCTCAGCCAGCAGA 58.775 47.619 0.00 0.00 0.00 4.26
727 2036 3.125573 CAGCAGAGCACAGCGCAT 61.126 61.111 11.47 0.00 46.13 4.73
732 2041 1.078201 CAGAGCACAGCGCATCGTTA 61.078 55.000 11.47 0.00 46.13 3.18
751 2060 0.250513 AGACATGGAGAACGCCCTTC 59.749 55.000 0.00 0.00 0.00 3.46
758 2067 1.134371 GGAGAACGCCCTTCATTAGCT 60.134 52.381 0.00 0.00 0.00 3.32
769 2078 9.417561 ACGCCCTTCATTAGCTACTATATATAA 57.582 33.333 0.00 0.00 0.00 0.98
786 2095 1.651737 TAAGGCAGCCTTAGGACACA 58.348 50.000 27.56 8.12 42.74 3.72
788 2097 0.838122 AGGCAGCCTTAGGACACACT 60.838 55.000 8.70 0.00 0.00 3.55
791 2100 1.537202 GCAGCCTTAGGACACACTTTG 59.463 52.381 0.69 0.00 0.00 2.77
793 2102 0.881796 GCCTTAGGACACACTTTGGC 59.118 55.000 0.69 0.00 33.08 4.52
794 2103 1.156736 CCTTAGGACACACTTTGGCG 58.843 55.000 0.00 0.00 31.40 5.69
795 2104 1.270625 CCTTAGGACACACTTTGGCGA 60.271 52.381 0.00 0.00 31.40 5.54
796 2105 1.798813 CTTAGGACACACTTTGGCGAC 59.201 52.381 0.00 0.00 31.40 5.19
797 2106 1.045407 TAGGACACACTTTGGCGACT 58.955 50.000 0.00 0.00 31.40 4.18
809 2140 2.988010 TGGCGACTTATCAAGCTCAT 57.012 45.000 0.00 0.00 0.00 2.90
832 2163 1.893808 CCGACCAGCAACAGCAAGT 60.894 57.895 0.00 0.00 0.00 3.16
838 2169 2.226437 ACCAGCAACAGCAAGTTAATCG 59.774 45.455 0.00 0.00 38.74 3.34
931 2262 8.514330 GATCAGGTCGATCCTAGATAGTAATT 57.486 38.462 6.28 0.00 46.24 1.40
932 2263 9.616156 GATCAGGTCGATCCTAGATAGTAATTA 57.384 37.037 6.28 0.00 46.24 1.40
991 2404 1.415659 AGGAAGGCAGGATCGATCAAG 59.584 52.381 25.93 17.88 0.00 3.02
992 2405 1.224965 GAAGGCAGGATCGATCAAGC 58.775 55.000 25.93 25.26 0.00 4.01
993 2406 0.543277 AAGGCAGGATCGATCAAGCA 59.457 50.000 30.02 0.00 32.13 3.91
994 2407 0.543277 AGGCAGGATCGATCAAGCAA 59.457 50.000 30.02 0.00 32.13 3.91
995 2408 0.942962 GGCAGGATCGATCAAGCAAG 59.057 55.000 30.02 14.89 32.13 4.01
996 2409 1.473965 GGCAGGATCGATCAAGCAAGA 60.474 52.381 30.02 0.00 32.13 3.02
997 2410 2.283298 GCAGGATCGATCAAGCAAGAA 58.717 47.619 26.64 0.00 0.00 2.52
1021 2434 1.301874 CAGTTGTTACCGGGCGGAA 60.302 57.895 6.32 0.00 38.96 4.30
1022 2435 0.885596 CAGTTGTTACCGGGCGGAAA 60.886 55.000 6.32 0.00 38.96 3.13
1024 2437 0.883153 GTTGTTACCGGGCGGAAATT 59.117 50.000 6.32 0.00 38.96 1.82
1025 2438 2.083002 GTTGTTACCGGGCGGAAATTA 58.917 47.619 6.32 0.00 38.96 1.40
1026 2439 2.684374 GTTGTTACCGGGCGGAAATTAT 59.316 45.455 6.32 0.00 38.96 1.28
1028 2441 2.093075 TGTTACCGGGCGGAAATTATCA 60.093 45.455 6.32 0.00 38.96 2.15
1029 2442 2.944349 GTTACCGGGCGGAAATTATCAA 59.056 45.455 6.32 0.00 38.96 2.57
1030 2443 1.385528 ACCGGGCGGAAATTATCAAC 58.614 50.000 6.32 0.00 38.96 3.18
1031 2444 0.666374 CCGGGCGGAAATTATCAACC 59.334 55.000 0.00 0.00 37.50 3.77
1032 2445 0.306533 CGGGCGGAAATTATCAACCG 59.693 55.000 0.00 0.00 46.74 4.44
1041 2454 6.565247 GCGGAAATTATCAACCGGTAATACTG 60.565 42.308 8.00 1.08 44.61 2.74
1044 2457 8.557029 GGAAATTATCAACCGGTAATACTGAAG 58.443 37.037 8.00 0.00 0.00 3.02
1049 2462 2.463752 ACCGGTAATACTGAAGCTGGA 58.536 47.619 4.49 0.00 0.00 3.86
1053 2466 4.202264 CCGGTAATACTGAAGCTGGAGAAT 60.202 45.833 0.00 0.00 0.00 2.40
1060 2473 1.339438 TGAAGCTGGAGAATGAGTGGC 60.339 52.381 0.00 0.00 0.00 5.01
1104 2517 2.456119 CCTGGCGACGCATCTTGTC 61.456 63.158 23.09 2.35 0.00 3.18
1114 2527 0.460987 GCATCTTGTCCTGGTCCTCG 60.461 60.000 0.00 0.00 0.00 4.63
1150 2563 2.665185 GTCGAGCCAGCGGTTTGT 60.665 61.111 0.00 0.00 0.00 2.83
1154 2567 3.259425 GAGCCAGCGGTTTGTGCAG 62.259 63.158 0.00 0.00 33.85 4.41
1157 2570 2.620112 CCAGCGGTTTGTGCAGAGG 61.620 63.158 0.00 0.00 33.85 3.69
1158 2571 1.597854 CAGCGGTTTGTGCAGAGGA 60.598 57.895 0.00 0.00 33.85 3.71
1159 2572 1.598130 AGCGGTTTGTGCAGAGGAC 60.598 57.895 0.00 0.00 33.85 3.85
1172 2585 2.498167 CAGAGGACTCCTGTGGTTTTG 58.502 52.381 13.52 0.00 40.66 2.44
1185 2598 1.342076 TGGTTTTGTTACCAGGTGGCA 60.342 47.619 0.76 0.00 43.14 4.92
1186 2599 1.757699 GGTTTTGTTACCAGGTGGCAA 59.242 47.619 0.76 4.43 38.12 4.52
1213 2626 1.195115 GGGGACACACTCTATCAGCA 58.805 55.000 0.00 0.00 0.00 4.41
1228 2641 3.818787 GCAACCTCATGCTGGGCG 61.819 66.667 8.97 1.79 43.06 6.13
1229 2642 3.818787 CAACCTCATGCTGGGCGC 61.819 66.667 0.00 0.00 39.77 6.53
1246 2659 2.359169 GCCGTCACATCCAGGGAGA 61.359 63.158 0.00 0.00 0.00 3.71
1263 2676 3.259425 GAAGCACCTGCACGCCTTG 62.259 63.158 0.00 0.00 45.16 3.61
1278 2691 0.326264 CCTTGTGGACTCCCTTCCTG 59.674 60.000 0.00 0.00 36.51 3.86
1282 2695 1.158466 TGGACTCCCTTCCTGCTCA 59.842 57.895 0.00 0.00 36.51 4.26
1321 2734 0.811616 CAACATCAGCGCCTACTCCC 60.812 60.000 2.29 0.00 0.00 4.30
1323 2736 1.365633 CATCAGCGCCTACTCCCTC 59.634 63.158 2.29 0.00 0.00 4.30
1326 2739 2.517402 AGCGCCTACTCCCTCGAG 60.517 66.667 2.29 5.13 42.32 4.04
1331 2744 1.104577 GCCTACTCCCTCGAGGACAG 61.105 65.000 33.39 26.96 40.93 3.51
1402 2815 6.518369 CGGAGCCATATTTATCCTGTACAAGA 60.518 42.308 0.00 0.00 0.00 3.02
1408 2821 9.613428 CCATATTTATCCTGTACAAGAACTTCA 57.387 33.333 0.00 0.00 0.00 3.02
1418 2831 3.318017 ACAAGAACTTCATCTTCGTCCG 58.682 45.455 0.00 0.00 37.56 4.79
1419 2832 1.997669 AGAACTTCATCTTCGTCCGC 58.002 50.000 0.00 0.00 0.00 5.54
1420 2833 0.640768 GAACTTCATCTTCGTCCGCG 59.359 55.000 0.00 0.00 39.92 6.46
1421 2834 0.242825 AACTTCATCTTCGTCCGCGA 59.757 50.000 8.23 0.00 46.36 5.87
1450 2863 4.643387 GGACCTTGTGGCAGGCGT 62.643 66.667 0.00 0.00 37.47 5.68
1465 2878 0.535335 GGCGTCCTACCTCATGTTCA 59.465 55.000 0.00 0.00 0.00 3.18
1473 2886 0.772124 ACCTCATGTTCACCCTGGGT 60.772 55.000 14.05 14.05 35.62 4.51
1474 2887 0.035056 CCTCATGTTCACCCTGGGTC 60.035 60.000 17.46 5.67 31.02 4.46
1477 2890 1.780309 TCATGTTCACCCTGGGTCTTT 59.220 47.619 17.46 0.00 31.02 2.52
1478 2891 2.983192 TCATGTTCACCCTGGGTCTTTA 59.017 45.455 17.46 3.50 31.02 1.85
1486 2899 2.301009 ACCCTGGGTCTTTACAAGTACG 59.699 50.000 14.05 0.00 0.00 3.67
1497 2910 6.796072 GTCTTTACAAGTACGTAGAGAGTGTG 59.204 42.308 0.00 0.00 34.35 3.82
1498 2911 6.484643 TCTTTACAAGTACGTAGAGAGTGTGT 59.515 38.462 0.00 0.00 30.08 3.72
1505 2918 1.606601 TAGAGAGTGTGTGGGCGCT 60.607 57.895 7.64 0.00 0.00 5.92
1506 2919 1.595993 TAGAGAGTGTGTGGGCGCTC 61.596 60.000 7.64 2.47 44.00 5.03
1517 2930 2.512515 GGCGCTCTGGCAAGGTAG 60.513 66.667 7.64 0.00 44.08 3.18
1524 2937 0.116342 TCTGGCAAGGTAGTCTGGGA 59.884 55.000 0.00 0.00 0.00 4.37
1546 2959 0.466189 CATCCGGGGGTCAATCAAGG 60.466 60.000 0.00 0.00 0.00 3.61
1558 2971 2.577563 TCAATCAAGGAGATGAAGCCCA 59.422 45.455 0.00 0.00 36.96 5.36
1562 2975 1.005215 CAAGGAGATGAAGCCCAAGGT 59.995 52.381 0.00 0.00 0.00 3.50
1563 2976 1.376649 AGGAGATGAAGCCCAAGGTT 58.623 50.000 0.00 0.00 36.10 3.50
1570 2983 0.962855 GAAGCCCAAGGTTCTGAGCC 60.963 60.000 1.81 1.81 45.19 4.70
1571 2984 2.361737 GCCCAAGGTTCTGAGCCC 60.362 66.667 6.95 0.00 0.00 5.19
1579 2992 1.676384 GTTCTGAGCCCTGCAGAGT 59.324 57.895 17.39 0.00 42.74 3.24
1582 2995 0.251787 TCTGAGCCCTGCAGAGTGTA 60.252 55.000 17.39 0.00 37.46 2.90
1586 2999 1.002544 GAGCCCTGCAGAGTGTAAAGT 59.997 52.381 17.39 0.00 0.00 2.66
1590 3003 2.026822 CCCTGCAGAGTGTAAAGTCCAT 60.027 50.000 17.39 0.00 0.00 3.41
1593 3006 2.371841 TGCAGAGTGTAAAGTCCATGGT 59.628 45.455 12.58 0.00 0.00 3.55
1596 3009 4.320494 GCAGAGTGTAAAGTCCATGGTTTG 60.320 45.833 12.58 0.00 0.00 2.93
1627 3040 0.251742 AGCCTTGCTGTTTGCCCATA 60.252 50.000 0.00 0.00 42.00 2.74
1628 3041 0.607620 GCCTTGCTGTTTGCCCATAA 59.392 50.000 0.00 0.00 42.00 1.90
1629 3042 1.001860 GCCTTGCTGTTTGCCCATAAA 59.998 47.619 0.00 0.00 42.00 1.40
1632 3045 3.319755 CTTGCTGTTTGCCCATAAACTG 58.680 45.455 0.00 0.00 40.36 3.16
1636 3049 1.000731 TGTTTGCCCATAAACTGCTGC 59.999 47.619 0.00 0.00 40.36 5.25
1639 3052 0.539207 TGCCCATAAACTGCTGCACA 60.539 50.000 0.00 0.00 0.00 4.57
1642 3055 1.064505 CCCATAAACTGCTGCACATCG 59.935 52.381 0.00 0.00 0.00 3.84
1643 3056 1.064505 CCATAAACTGCTGCACATCGG 59.935 52.381 0.00 0.00 0.00 4.18
1669 3082 1.223487 GCCTTTGCGGACTATCCCA 59.777 57.895 0.00 0.00 31.13 4.37
1673 3086 2.224621 CCTTTGCGGACTATCCCATCAT 60.225 50.000 0.00 0.00 31.13 2.45
1687 3100 1.135024 CCATCATTTTGAAGCCGGTGG 60.135 52.381 1.90 0.00 0.00 4.61
1688 3101 1.545582 CATCATTTTGAAGCCGGTGGT 59.454 47.619 1.90 0.00 0.00 4.16
1689 3102 0.958091 TCATTTTGAAGCCGGTGGTG 59.042 50.000 1.90 0.00 0.00 4.17
1690 3103 0.958091 CATTTTGAAGCCGGTGGTGA 59.042 50.000 1.90 0.00 0.00 4.02
1692 3105 0.821711 TTTTGAAGCCGGTGGTGAGG 60.822 55.000 1.90 0.00 0.00 3.86
1698 3111 4.308458 CCGGTGGTGAGGCGTCAA 62.308 66.667 11.28 0.00 33.27 3.18
1701 3114 1.296715 GGTGGTGAGGCGTCAAGAT 59.703 57.895 11.28 0.00 33.27 2.40
1702 3115 1.021390 GGTGGTGAGGCGTCAAGATG 61.021 60.000 11.28 0.00 33.27 2.90
1722 3153 4.032960 TGAAATAAGAGCCTTCTGCCAA 57.967 40.909 0.00 0.00 42.71 4.52
1726 3157 2.125773 AAGAGCCTTCTGCCAATCTG 57.874 50.000 0.00 0.00 42.71 2.90
1914 3345 2.048127 GGTGAGAGTGGTGCGGAC 60.048 66.667 0.00 0.00 0.00 4.79
2012 3443 1.825090 TGGACATGTGCATTCCTGAC 58.175 50.000 16.89 0.00 0.00 3.51
2020 3451 0.815213 TGCATTCCTGACGCATAGGC 60.815 55.000 0.00 0.00 35.23 3.93
2025 3456 2.511373 CTGACGCATAGGCCGCAA 60.511 61.111 0.00 0.00 36.38 4.85
2026 3457 2.813179 CTGACGCATAGGCCGCAAC 61.813 63.158 0.00 0.00 36.38 4.17
2027 3458 2.817834 GACGCATAGGCCGCAACA 60.818 61.111 0.00 0.00 36.38 3.33
2028 3459 2.124736 ACGCATAGGCCGCAACAT 60.125 55.556 0.00 0.00 36.38 2.71
2029 3460 1.714899 GACGCATAGGCCGCAACATT 61.715 55.000 0.00 0.00 36.38 2.71
2030 3461 1.298563 CGCATAGGCCGCAACATTG 60.299 57.895 0.00 0.00 36.38 2.82
2031 3462 1.066257 GCATAGGCCGCAACATTGG 59.934 57.895 0.00 0.00 0.00 3.16
2041 3472 1.267806 CGCAACATTGGCTTCTTCACT 59.732 47.619 0.00 0.00 0.00 3.41
2042 3473 2.669364 GCAACATTGGCTTCTTCACTG 58.331 47.619 0.00 0.00 0.00 3.66
2043 3474 2.035066 GCAACATTGGCTTCTTCACTGT 59.965 45.455 0.00 0.00 30.90 3.55
2055 3486 1.118965 TTCACTGTTCGCTGGGGAGA 61.119 55.000 0.00 0.00 0.00 3.71
2101 3532 4.812476 TCGTCGCCGGCAAGGATG 62.812 66.667 28.98 20.39 45.00 3.51
2129 3560 2.386064 TACAGGTTGTGGTCGGGCAC 62.386 60.000 0.00 0.00 0.00 5.01
2195 3626 2.284190 GGCCAGCAAGCTAGTAAAGAG 58.716 52.381 0.00 0.00 0.00 2.85
2237 3668 3.067106 GGATGGAATACACATACGGCTG 58.933 50.000 0.00 0.00 0.00 4.85
2252 3683 2.270205 CTGCTCCGAGGGCATTGT 59.730 61.111 0.00 0.00 39.07 2.71
2261 3692 2.548067 CCGAGGGCATTGTACTATCACC 60.548 54.545 0.00 0.00 0.00 4.02
2266 3697 3.565482 GGGCATTGTACTATCACCATGTG 59.435 47.826 7.78 0.00 34.45 3.21
2270 3701 5.528690 GCATTGTACTATCACCATGTGTCAT 59.471 40.000 0.00 0.00 34.79 3.06
2280 3711 1.814394 CCATGTGTCATGGACTTGGTG 59.186 52.381 20.19 0.00 41.64 4.17
2304 3735 6.496565 TGTTCCAATGGGTATGTGAAATTCTT 59.503 34.615 0.00 0.00 34.93 2.52
2307 3738 6.723515 TCCAATGGGTATGTGAAATTCTTGAA 59.276 34.615 0.00 0.00 34.93 2.69
2316 3747 6.076981 TGTGAAATTCTTGAAGAAGCCTTC 57.923 37.500 13.56 14.45 46.89 3.46
2317 3748 5.010012 TGTGAAATTCTTGAAGAAGCCTTCC 59.990 40.000 13.56 9.77 46.33 3.46
2318 3749 4.524328 TGAAATTCTTGAAGAAGCCTTCCC 59.476 41.667 13.56 0.00 46.33 3.97
2319 3750 3.814504 ATTCTTGAAGAAGCCTTCCCA 57.185 42.857 13.56 0.00 46.33 4.37
2320 3751 2.867109 TCTTGAAGAAGCCTTCCCAG 57.133 50.000 0.00 0.00 46.33 4.45
2321 3752 2.338809 TCTTGAAGAAGCCTTCCCAGA 58.661 47.619 0.00 0.00 46.33 3.86
2322 3753 2.304180 TCTTGAAGAAGCCTTCCCAGAG 59.696 50.000 0.00 0.00 46.33 3.35
2323 3754 0.987294 TGAAGAAGCCTTCCCAGAGG 59.013 55.000 0.00 0.00 46.33 3.69
2324 3755 1.280457 GAAGAAGCCTTCCCAGAGGA 58.720 55.000 0.00 0.00 42.24 3.71
2367 3798 9.541143 GAAGAAGAAGAAGAAGAAGAAGAAGAA 57.459 33.333 0.00 0.00 0.00 2.52
2370 3801 9.541143 GAAGAAGAAGAAGAAGAAGAAGAAGAA 57.459 33.333 0.00 0.00 0.00 2.52
2373 3804 9.541143 GAAGAAGAAGAAGAAGAAGAAGAAGAA 57.459 33.333 0.00 0.00 0.00 2.52
2376 3807 9.541143 GAAGAAGAAGAAGAAGAAGAAGAAGAA 57.459 33.333 0.00 0.00 0.00 2.52
2386 3817 9.546428 AAGAAGAAGAAGAAGAAGAAGAAGAAG 57.454 33.333 0.00 0.00 0.00 2.85
2393 3824 8.923270 AGAAGAAGAAGAAGAAGAAGAAGAAGA 58.077 33.333 0.00 0.00 0.00 2.87
2398 3829 8.028652 AGAAGAAGAAGAAGAAGAAGAAGGAA 57.971 34.615 0.00 0.00 0.00 3.36
2426 3857 2.160417 CAGACGAAGAAATTGCTGTCCC 59.840 50.000 1.16 0.00 0.00 4.46
2427 3858 1.128692 GACGAAGAAATTGCTGTCCCG 59.871 52.381 0.00 0.00 0.00 5.14
2434 3865 1.779061 AATTGCTGTCCCGGTGACCT 61.779 55.000 17.20 0.00 43.78 3.85
2436 3867 4.083862 GCTGTCCCGGTGACCTCC 62.084 72.222 17.20 5.28 43.78 4.30
2440 3871 1.346479 TGTCCCGGTGACCTCCAAAA 61.346 55.000 17.20 0.00 43.78 2.44
2442 3873 0.774908 TCCCGGTGACCTCCAAAATT 59.225 50.000 0.00 0.00 0.00 1.82
2469 3912 3.815401 CCAAAGCGGAAATAGGTATGGAG 59.185 47.826 0.00 0.00 36.56 3.86
2479 3922 2.808206 GGTATGGAGACCGGCCCAG 61.808 68.421 14.86 0.00 35.67 4.45
2511 3954 0.036388 CCCTAAAGAGACAAGCGGCA 60.036 55.000 1.45 0.00 0.00 5.69
2536 3979 2.084546 GCAAAGTTCTTGGTATCGGCT 58.915 47.619 0.00 0.00 0.00 5.52
2538 3981 2.678336 CAAAGTTCTTGGTATCGGCTCC 59.322 50.000 0.00 0.00 0.00 4.70
2649 4092 2.108157 TGCAAACACGTCGAGGCT 59.892 55.556 4.75 0.00 0.00 4.58
2813 4263 3.007614 TCTGGTCGAAAAACTAAGAGGGG 59.992 47.826 0.00 0.00 0.00 4.79
2870 4320 1.296392 CTGACCATCTCCACCGCAA 59.704 57.895 0.00 0.00 0.00 4.85
2991 4450 1.078143 GCACCAGGACAGATGGACC 60.078 63.158 0.00 0.00 40.51 4.46
3005 4464 1.213799 GGACCGGACCACTTCGTAC 59.786 63.158 18.62 0.00 0.00 3.67
3007 4466 0.600057 GACCGGACCACTTCGTACTT 59.400 55.000 9.46 0.00 0.00 2.24
3015 4474 2.025418 ACTTCGTACTTTGGCGCCG 61.025 57.895 23.90 10.49 0.00 6.46
3031 4490 2.322081 CCGGGCTTGTACCACAACG 61.322 63.158 0.00 0.00 33.96 4.10
3034 4493 0.533308 GGGCTTGTACCACAACGTCA 60.533 55.000 0.00 0.00 33.96 4.35
3038 4497 2.096174 GCTTGTACCACAACGTCAACAA 59.904 45.455 0.00 0.00 33.96 2.83
3040 4499 1.666700 TGTACCACAACGTCAACAAGC 59.333 47.619 0.00 0.00 0.00 4.01
3046 4507 0.040958 CAACGTCAACAAGCCTCTGC 60.041 55.000 0.00 0.00 37.95 4.26
3052 4513 0.809385 CAACAAGCCTCTGCAGATGG 59.191 55.000 18.63 20.31 41.13 3.51
3080 4541 6.531923 AGATGTTGGAGATCATCTTGTATGG 58.468 40.000 0.00 0.00 45.43 2.74
3186 4647 1.690283 CTGTCGTCTGGATGCTTGCG 61.690 60.000 0.00 0.00 0.00 4.85
3187 4648 2.125552 TCGTCTGGATGCTTGCGG 60.126 61.111 0.00 0.00 0.00 5.69
3203 4664 4.762825 GGAACACGCCGGCATATA 57.237 55.556 28.98 0.00 0.00 0.86
3205 4666 0.796312 GGAACACGCCGGCATATATG 59.204 55.000 28.98 17.63 0.00 1.78
3240 4701 1.781786 AGACTAGTGATCGGCCATGT 58.218 50.000 0.00 0.00 0.00 3.21
3260 4739 1.584724 TGGTTTCCCTCTCCTGATCC 58.415 55.000 0.00 0.00 0.00 3.36
3263 4742 1.134250 GTTTCCCTCTCCTGATCCAGC 60.134 57.143 0.00 0.00 0.00 4.85
3295 4774 4.965158 GTGTTGCGTCTTTTGATCGTTTAA 59.035 37.500 0.00 0.00 0.00 1.52
3301 4780 8.206516 TGCGTCTTTTGATCGTTTAATTAAAC 57.793 30.769 24.95 24.95 41.51 2.01
3322 4801 0.308993 GCATTATGAAGCGCCTGGAC 59.691 55.000 2.29 0.00 0.00 4.02
3349 4828 3.991121 GCAGACTGAGACTTAGTTTGGTC 59.009 47.826 16.60 1.38 32.60 4.02
3384 4863 3.838795 GCACGAACGCGCTGGTAG 61.839 66.667 5.73 0.36 42.48 3.18
3395 4874 1.671850 GCGCTGGTAGACTTGTAAGCA 60.672 52.381 0.00 0.00 0.00 3.91
3409 4888 5.065988 ACTTGTAAGCATGTTGTCTCGTTTT 59.934 36.000 0.00 0.00 30.04 2.43
3423 4902 1.593933 TCGTTTTCTTCACGTTTCCGG 59.406 47.619 0.00 0.00 38.81 5.14
3428 4907 4.437772 TTTCTTCACGTTTCCGGTTTTT 57.562 36.364 0.00 0.00 38.78 1.94
3458 4938 1.398174 TTGTGGGTTGTGTGGGCATG 61.398 55.000 0.00 0.00 0.00 4.06
3459 4939 1.530419 GTGGGTTGTGTGGGCATGA 60.530 57.895 0.00 0.00 0.00 3.07
3460 4940 0.899717 GTGGGTTGTGTGGGCATGAT 60.900 55.000 0.00 0.00 0.00 2.45
3461 4941 0.701147 TGGGTTGTGTGGGCATGATA 59.299 50.000 0.00 0.00 0.00 2.15
3463 4943 1.476488 GGGTTGTGTGGGCATGATAAC 59.524 52.381 0.00 0.00 0.00 1.89
3464 4944 2.166829 GGTTGTGTGGGCATGATAACA 58.833 47.619 0.00 0.00 0.00 2.41
3465 4945 2.760092 GGTTGTGTGGGCATGATAACAT 59.240 45.455 0.00 0.00 37.19 2.71
3512 4992 0.389757 TACTGCCGTGTGCTTGTGTA 59.610 50.000 0.00 0.00 42.00 2.90
3516 4996 1.678627 TGCCGTGTGCTTGTGTATTTT 59.321 42.857 0.00 0.00 42.00 1.82
3517 4997 2.050691 GCCGTGTGCTTGTGTATTTTG 58.949 47.619 0.00 0.00 36.87 2.44
3518 4998 2.050691 CCGTGTGCTTGTGTATTTTGC 58.949 47.619 0.00 0.00 0.00 3.68
3519 4999 1.708158 CGTGTGCTTGTGTATTTTGCG 59.292 47.619 0.00 0.00 0.00 4.85
3520 5000 1.451651 GTGTGCTTGTGTATTTTGCGC 59.548 47.619 0.00 0.00 35.09 6.09
3521 5001 1.066152 TGTGCTTGTGTATTTTGCGCA 59.934 42.857 5.66 5.66 41.01 6.09
3525 5005 3.183976 TGCTTGTGTATTTTGCGCATTTG 59.816 39.130 12.75 0.00 0.00 2.32
3527 5007 4.690096 CTTGTGTATTTTGCGCATTTGTG 58.310 39.130 12.75 0.00 0.00 3.33
3531 5024 4.026145 GTGTATTTTGCGCATTTGTGTTGT 60.026 37.500 12.75 0.00 0.00 3.32
3548 5041 3.013921 GTTGTGACCAAACAGACCTTCA 58.986 45.455 0.00 0.00 30.94 3.02
3551 5044 3.279434 GTGACCAAACAGACCTTCAACT 58.721 45.455 0.00 0.00 0.00 3.16
3586 5079 5.981315 CCTGGAATGTGATTTAATGTCATGC 59.019 40.000 0.00 0.00 0.00 4.06
3595 5088 8.738106 TGTGATTTAATGTCATGCTGAACATAA 58.262 29.630 0.00 0.00 36.64 1.90
3667 5254 3.837213 ATGTTGTGCTTGCTCATACAC 57.163 42.857 11.55 0.00 0.00 2.90
3672 5259 3.678289 TGTGCTTGCTCATACACAGATT 58.322 40.909 0.00 0.00 38.07 2.40
3761 5354 9.481340 AAAGTATGAAAAGAAAAGAAATCTGGC 57.519 29.630 0.00 0.00 0.00 4.85
3762 5355 7.606349 AGTATGAAAAGAAAAGAAATCTGGCC 58.394 34.615 0.00 0.00 0.00 5.36
3763 5356 6.676990 ATGAAAAGAAAAGAAATCTGGCCT 57.323 33.333 3.32 0.00 0.00 5.19
3764 5357 7.781324 ATGAAAAGAAAAGAAATCTGGCCTA 57.219 32.000 3.32 0.00 0.00 3.93
3765 5358 6.981722 TGAAAAGAAAAGAAATCTGGCCTAC 58.018 36.000 3.32 0.00 0.00 3.18
3766 5359 6.549364 TGAAAAGAAAAGAAATCTGGCCTACA 59.451 34.615 3.32 0.00 0.00 2.74
3767 5360 7.233348 TGAAAAGAAAAGAAATCTGGCCTACAT 59.767 33.333 3.32 0.00 0.00 2.29
3768 5361 6.765915 AAGAAAAGAAATCTGGCCTACATC 57.234 37.500 3.32 0.00 0.00 3.06
3769 5362 5.819991 AGAAAAGAAATCTGGCCTACATCA 58.180 37.500 3.32 0.00 0.00 3.07
3770 5363 6.248433 AGAAAAGAAATCTGGCCTACATCAA 58.752 36.000 3.32 0.00 0.00 2.57
3771 5364 6.721208 AGAAAAGAAATCTGGCCTACATCAAA 59.279 34.615 3.32 0.00 0.00 2.69
3772 5365 5.904362 AAGAAATCTGGCCTACATCAAAC 57.096 39.130 3.32 0.00 0.00 2.93
3773 5366 4.273318 AGAAATCTGGCCTACATCAAACC 58.727 43.478 3.32 0.00 0.00 3.27
3774 5367 4.018050 AGAAATCTGGCCTACATCAAACCT 60.018 41.667 3.32 0.00 0.00 3.50
3775 5368 2.787473 TCTGGCCTACATCAAACCTG 57.213 50.000 3.32 0.00 0.00 4.00
3776 5369 2.265367 TCTGGCCTACATCAAACCTGA 58.735 47.619 3.32 0.00 35.56 3.86
3777 5370 2.237143 TCTGGCCTACATCAAACCTGAG 59.763 50.000 3.32 0.00 34.23 3.35
3778 5371 2.237143 CTGGCCTACATCAAACCTGAGA 59.763 50.000 3.32 0.00 34.23 3.27
3779 5372 2.237143 TGGCCTACATCAAACCTGAGAG 59.763 50.000 3.32 0.00 34.23 3.20
3780 5373 2.237392 GGCCTACATCAAACCTGAGAGT 59.763 50.000 0.00 0.00 34.23 3.24
3781 5374 3.265791 GCCTACATCAAACCTGAGAGTG 58.734 50.000 0.00 0.00 34.23 3.51
3782 5375 3.307059 GCCTACATCAAACCTGAGAGTGT 60.307 47.826 0.00 0.00 34.23 3.55
3783 5376 4.804261 GCCTACATCAAACCTGAGAGTGTT 60.804 45.833 0.00 0.00 34.23 3.32
3784 5377 4.692625 CCTACATCAAACCTGAGAGTGTTG 59.307 45.833 0.00 0.00 34.23 3.33
3785 5378 2.880890 ACATCAAACCTGAGAGTGTTGC 59.119 45.455 0.00 0.00 34.23 4.17
3786 5379 1.581934 TCAAACCTGAGAGTGTTGCG 58.418 50.000 0.00 0.00 0.00 4.85
3787 5380 1.138069 TCAAACCTGAGAGTGTTGCGA 59.862 47.619 0.00 0.00 0.00 5.10
3788 5381 2.146342 CAAACCTGAGAGTGTTGCGAT 58.854 47.619 0.00 0.00 0.00 4.58
3789 5382 1.800805 AACCTGAGAGTGTTGCGATG 58.199 50.000 0.00 0.00 0.00 3.84
3790 5383 0.969149 ACCTGAGAGTGTTGCGATGA 59.031 50.000 0.00 0.00 0.00 2.92
3791 5384 1.552337 ACCTGAGAGTGTTGCGATGAT 59.448 47.619 0.00 0.00 0.00 2.45
3792 5385 1.931841 CCTGAGAGTGTTGCGATGATG 59.068 52.381 0.00 0.00 0.00 3.07
3793 5386 2.417787 CCTGAGAGTGTTGCGATGATGA 60.418 50.000 0.00 0.00 0.00 2.92
3794 5387 2.602211 CTGAGAGTGTTGCGATGATGAC 59.398 50.000 0.00 0.00 0.00 3.06
3795 5388 2.029110 TGAGAGTGTTGCGATGATGACA 60.029 45.455 0.00 0.00 0.00 3.58
3796 5389 2.995939 GAGAGTGTTGCGATGATGACAA 59.004 45.455 0.00 0.00 0.00 3.18
3797 5390 3.603532 AGAGTGTTGCGATGATGACAAT 58.396 40.909 0.00 0.00 0.00 2.71
3798 5391 4.005650 AGAGTGTTGCGATGATGACAATT 58.994 39.130 0.00 0.00 0.00 2.32
3799 5392 4.087510 AGTGTTGCGATGATGACAATTG 57.912 40.909 3.24 3.24 0.00 2.32
3800 5393 2.595536 GTGTTGCGATGATGACAATTGC 59.404 45.455 5.05 0.00 0.00 3.56
3801 5394 1.841944 GTTGCGATGATGACAATTGCG 59.158 47.619 5.05 0.00 0.00 4.85
3802 5395 1.367659 TGCGATGATGACAATTGCGA 58.632 45.000 5.05 0.00 0.00 5.10
3803 5396 1.328374 TGCGATGATGACAATTGCGAG 59.672 47.619 5.05 0.00 0.00 5.03
3804 5397 1.328680 GCGATGATGACAATTGCGAGT 59.671 47.619 5.05 0.00 0.00 4.18
3805 5398 2.539688 GCGATGATGACAATTGCGAGTA 59.460 45.455 5.05 0.00 0.00 2.59
3806 5399 3.362401 GCGATGATGACAATTGCGAGTAG 60.362 47.826 5.05 0.00 0.00 2.57
3823 5416 4.261656 CGAGTAGTACCCAAGCCTCTATTG 60.262 50.000 0.00 0.00 0.00 1.90
3838 5431 4.643784 CCTCTATTGCAGGCAAGATTTTCT 59.356 41.667 12.66 0.00 39.47 2.52
3879 5472 0.249955 GTGAAAATGGCCCATGGTGG 59.750 55.000 11.73 0.00 37.25 4.61
3916 5509 3.214328 CGTGCTATTATTTTGGGAGGCT 58.786 45.455 0.00 0.00 0.00 4.58
3940 5533 1.278238 GGTAGAAATCGGCTGTGACG 58.722 55.000 0.00 0.00 34.09 4.35
3941 5534 1.278238 GTAGAAATCGGCTGTGACGG 58.722 55.000 0.00 0.00 33.33 4.79
3969 5562 6.036191 GGCTTTCCGTGAAAATTTTGTTAACA 59.964 34.615 8.47 3.59 30.84 2.41
3989 5582 1.240256 TGGTTTGTATTCCCGTGTGC 58.760 50.000 0.00 0.00 0.00 4.57
4050 5643 2.496070 CCATCTCTTCCACGTTGACCTA 59.504 50.000 0.00 0.00 0.00 3.08
4060 5653 2.805671 CACGTTGACCTAACTGCATGAA 59.194 45.455 0.00 0.00 37.13 2.57
4061 5654 3.067106 ACGTTGACCTAACTGCATGAAG 58.933 45.455 0.00 0.00 37.13 3.02
4097 5915 2.756207 AGTGTTACGTGGGCTTTGTTTT 59.244 40.909 0.00 0.00 0.00 2.43
4140 5958 7.881142 TGATTGAATTACATGGTTCGTTCTTT 58.119 30.769 0.00 0.00 0.00 2.52
4315 9671 2.821546 TCGGACTGCAGTACAATATGC 58.178 47.619 28.29 9.51 42.86 3.14
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 7.455008 GGTAAGAATCCATAGTCTGATTCCCTA 59.545 40.741 8.24 0.12 45.09 3.53
11 12 4.341235 TGGTCGGTAAGAATCCATAGTCTG 59.659 45.833 0.00 0.00 28.61 3.51
12 13 4.543689 TGGTCGGTAAGAATCCATAGTCT 58.456 43.478 0.00 0.00 0.00 3.24
13 14 4.341520 ACTGGTCGGTAAGAATCCATAGTC 59.658 45.833 0.00 0.00 0.00 2.59
42 43 2.443390 GTGAGGGTAGCGGGGCTA 60.443 66.667 0.00 0.00 40.44 3.93
48 49 0.824109 TCATTCTGGTGAGGGTAGCG 59.176 55.000 0.00 0.00 0.00 4.26
52 53 0.608640 GTCGTCATTCTGGTGAGGGT 59.391 55.000 0.00 0.00 35.35 4.34
59 60 5.410924 TGTCTAATCAAGTCGTCATTCTGG 58.589 41.667 0.00 0.00 0.00 3.86
62 63 5.292101 CCCTTGTCTAATCAAGTCGTCATTC 59.708 44.000 5.86 0.00 42.01 2.67
63 64 5.178797 CCCTTGTCTAATCAAGTCGTCATT 58.821 41.667 5.86 0.00 42.01 2.57
71 72 6.807789 GGTAGACTACCCTTGTCTAATCAAG 58.192 44.000 19.55 0.00 45.14 3.02
86 129 3.438087 TGCACGTTCTACAGGTAGACTAC 59.562 47.826 8.61 3.86 41.48 2.73
109 152 9.921637 TTTTATGGCGATTAACTTCAGAAAATT 57.078 25.926 0.00 0.00 0.00 1.82
110 153 9.921637 TTTTTATGGCGATTAACTTCAGAAAAT 57.078 25.926 0.00 0.00 31.61 1.82
142 185 4.537015 GGATCTTTTGAACAAACCACGAG 58.463 43.478 0.00 0.00 0.00 4.18
145 188 4.201970 TGACGGATCTTTTGAACAAACCAC 60.202 41.667 0.00 0.00 0.00 4.16
148 191 3.975035 GCTGACGGATCTTTTGAACAAAC 59.025 43.478 0.00 0.00 0.00 2.93
155 198 2.096496 GGACATGCTGACGGATCTTTTG 59.904 50.000 0.00 0.00 0.00 2.44
186 229 9.990360 ATGCATAATGATGAATGAAGCAAAATA 57.010 25.926 0.00 0.00 34.73 1.40
187 230 8.902540 ATGCATAATGATGAATGAAGCAAAAT 57.097 26.923 0.00 0.00 34.73 1.82
188 231 8.725405 AATGCATAATGATGAATGAAGCAAAA 57.275 26.923 0.00 0.00 30.97 2.44
244 288 3.529533 CTTGTTCCACCAGCTCTCATAG 58.470 50.000 0.00 0.00 0.00 2.23
245 289 2.237143 CCTTGTTCCACCAGCTCTCATA 59.763 50.000 0.00 0.00 0.00 2.15
316 360 2.047274 ATGACCACGCAGGGAACG 60.047 61.111 0.00 0.00 43.89 3.95
319 363 0.392863 CAATGATGACCACGCAGGGA 60.393 55.000 0.00 0.00 43.89 4.20
320 364 0.677731 ACAATGATGACCACGCAGGG 60.678 55.000 0.00 0.00 43.89 4.45
321 365 0.729116 GACAATGATGACCACGCAGG 59.271 55.000 0.00 0.00 45.67 4.85
323 367 1.634757 GCGACAATGATGACCACGCA 61.635 55.000 0.00 0.00 43.18 5.24
333 377 0.957362 TTGCCATGTTGCGACAATGA 59.043 45.000 11.67 0.00 39.66 2.57
337 381 0.672889 ACATTTGCCATGTTGCGACA 59.327 45.000 9.77 9.77 40.71 4.35
341 385 2.063156 TCGAACATTTGCCATGTTGC 57.937 45.000 14.42 7.00 41.76 4.17
344 388 4.517952 TTTCATCGAACATTTGCCATGT 57.482 36.364 0.00 0.00 0.00 3.21
352 396 5.743398 CGGTTTATGCATTTCATCGAACATT 59.257 36.000 3.54 0.00 35.11 2.71
355 399 4.904116 TCGGTTTATGCATTTCATCGAAC 58.096 39.130 3.54 0.00 36.63 3.95
368 412 9.807386 CAGAGTAAAGTTACTTTTCGGTTTATG 57.193 33.333 15.83 0.00 43.64 1.90
369 413 9.551734 ACAGAGTAAAGTTACTTTTCGGTTTAT 57.448 29.630 15.83 0.00 43.64 1.40
370 414 8.947055 ACAGAGTAAAGTTACTTTTCGGTTTA 57.053 30.769 15.83 0.00 43.64 2.01
398 445 7.873699 AGTGGAGTATTTGTAGCCCTATATT 57.126 36.000 0.00 0.00 0.00 1.28
415 493 4.099113 GGCGGAGTAAATACTTAGTGGAGT 59.901 45.833 0.00 0.00 36.50 3.85
421 499 3.996150 TCCGGCGGAGTAAATACTTAG 57.004 47.619 27.46 0.00 36.50 2.18
426 504 1.267806 GACGATCCGGCGGAGTAAATA 59.732 52.381 33.82 9.51 34.05 1.40
444 522 5.136105 ACCGATCCCCTATATATTACGGAC 58.864 45.833 0.00 0.00 40.78 4.79
445 523 5.393068 ACCGATCCCCTATATATTACGGA 57.607 43.478 0.00 0.00 40.78 4.69
446 524 7.000472 TCTAACCGATCCCCTATATATTACGG 59.000 42.308 0.00 0.00 42.78 4.02
447 525 8.455903 TTCTAACCGATCCCCTATATATTACG 57.544 38.462 0.00 0.00 0.00 3.18
502 1811 0.827507 GCAAGGGTGGGTCATGTTGT 60.828 55.000 0.00 0.00 0.00 3.32
503 1812 0.827089 TGCAAGGGTGGGTCATGTTG 60.827 55.000 0.00 0.00 0.00 3.33
504 1813 0.827507 GTGCAAGGGTGGGTCATGTT 60.828 55.000 0.00 0.00 0.00 2.71
540 1849 1.102809 TCACAGTGCCACTTGCCTTG 61.103 55.000 0.00 0.00 40.16 3.61
565 1874 7.669722 TCCAAAGCAGAAACAATTATCCTTAGT 59.330 33.333 0.00 0.00 0.00 2.24
589 1898 5.532406 TGCTTAATGATATCACTTTGCCTCC 59.468 40.000 7.78 0.00 0.00 4.30
591 1900 6.774170 TCATGCTTAATGATATCACTTTGCCT 59.226 34.615 7.78 1.60 40.50 4.75
603 1912 8.834004 AGGCCATTATATTCATGCTTAATGAT 57.166 30.769 5.01 0.00 44.84 2.45
604 1913 8.654485 AAGGCCATTATATTCATGCTTAATGA 57.346 30.769 5.01 0.00 43.79 2.57
662 1971 1.355066 GCGGCAGTCAGTGAAGCTAC 61.355 60.000 15.88 7.13 0.00 3.58
675 1984 0.960364 ATACCAGGTTGTTGCGGCAG 60.960 55.000 1.67 0.00 0.00 4.85
695 2004 1.952296 CTGCTGGCTGAGAAACTTTGT 59.048 47.619 0.00 0.00 0.00 2.83
696 2005 2.224606 TCTGCTGGCTGAGAAACTTTG 58.775 47.619 0.00 0.00 0.00 2.77
697 2006 2.502295 CTCTGCTGGCTGAGAAACTTT 58.498 47.619 19.87 0.00 42.28 2.66
703 2012 2.168666 CTGTGCTCTGCTGGCTGAGA 62.169 60.000 25.90 12.81 42.28 3.27
716 2025 1.078759 GTCTAACGATGCGCTGTGCT 61.079 55.000 14.92 0.00 46.63 4.40
727 2036 1.135199 GGCGTTCTCCATGTCTAACGA 60.135 52.381 20.91 0.00 45.59 3.85
732 2041 0.250513 GAAGGGCGTTCTCCATGTCT 59.749 55.000 12.42 0.00 31.73 3.41
751 2060 8.865090 AGGCTGCCTTATATATAGTAGCTAATG 58.135 37.037 17.22 6.04 0.00 1.90
758 2067 8.341513 TGTCCTAAGGCTGCCTTATATATAGTA 58.658 37.037 34.40 16.22 44.01 1.82
769 2078 0.838122 AGTGTGTCCTAAGGCTGCCT 60.838 55.000 17.22 17.22 33.87 4.75
782 2091 3.120321 TGATAAGTCGCCAAAGTGTGT 57.880 42.857 0.00 0.00 0.00 3.72
783 2092 3.667960 GCTTGATAAGTCGCCAAAGTGTG 60.668 47.826 0.00 0.00 0.00 3.82
784 2093 2.484264 GCTTGATAAGTCGCCAAAGTGT 59.516 45.455 0.00 0.00 0.00 3.55
785 2094 2.744202 AGCTTGATAAGTCGCCAAAGTG 59.256 45.455 0.00 0.00 0.00 3.16
786 2095 3.003480 GAGCTTGATAAGTCGCCAAAGT 58.997 45.455 0.00 0.00 0.00 2.66
788 2097 3.052455 TGAGCTTGATAAGTCGCCAAA 57.948 42.857 0.00 0.00 0.00 3.28
791 2100 1.262683 GCATGAGCTTGATAAGTCGCC 59.737 52.381 0.00 0.00 37.91 5.54
793 2102 1.524355 CCGCATGAGCTTGATAAGTCG 59.476 52.381 0.00 0.00 39.10 4.18
794 2103 1.262683 GCCGCATGAGCTTGATAAGTC 59.737 52.381 0.00 0.00 39.10 3.01
795 2104 1.303309 GCCGCATGAGCTTGATAAGT 58.697 50.000 0.00 0.00 39.10 2.24
796 2105 0.590195 GGCCGCATGAGCTTGATAAG 59.410 55.000 0.00 0.00 39.10 1.73
797 2106 1.159713 CGGCCGCATGAGCTTGATAA 61.160 55.000 14.67 0.00 39.10 1.75
832 2163 2.035066 GGCGTACCTAGCTTCCGATTAA 59.965 50.000 0.00 0.00 34.52 1.40
838 2169 0.464452 ACATGGCGTACCTAGCTTCC 59.536 55.000 0.00 0.00 36.63 3.46
892 2223 6.713903 ATCGACCTGATCTAATTACGGAGTAA 59.286 38.462 0.00 0.00 45.80 2.24
893 2224 5.614308 TCGACCTGATCTAATTACGGAGTA 58.386 41.667 0.00 0.00 45.11 2.59
894 2225 5.071370 ATCGACCTGATCTAATTACGGAGT 58.929 41.667 0.00 0.00 37.33 3.85
895 2226 5.630661 ATCGACCTGATCTAATTACGGAG 57.369 43.478 0.00 0.00 28.49 4.63
930 2261 9.675464 CCCAATTTAACATACTACTCCAGTTAA 57.325 33.333 0.00 0.00 38.80 2.01
931 2262 8.828751 ACCCAATTTAACATACTACTCCAGTTA 58.171 33.333 0.00 0.00 38.80 2.24
932 2263 7.696017 ACCCAATTTAACATACTACTCCAGTT 58.304 34.615 0.00 0.00 38.80 3.16
991 2404 2.144482 AACAACTGCATGCTTCTTGC 57.856 45.000 20.33 0.00 43.25 4.01
992 2405 3.568538 GGTAACAACTGCATGCTTCTTG 58.431 45.455 20.33 17.85 0.00 3.02
993 2406 2.226437 CGGTAACAACTGCATGCTTCTT 59.774 45.455 20.33 4.25 0.00 2.52
994 2407 1.806542 CGGTAACAACTGCATGCTTCT 59.193 47.619 20.33 0.00 0.00 2.85
995 2408 1.135689 CCGGTAACAACTGCATGCTTC 60.136 52.381 20.33 0.00 0.00 3.86
996 2409 0.881118 CCGGTAACAACTGCATGCTT 59.119 50.000 20.33 6.81 0.00 3.91
997 2410 0.960364 CCCGGTAACAACTGCATGCT 60.960 55.000 20.33 0.00 0.00 3.79
1021 2434 7.226720 CAGCTTCAGTATTACCGGTTGATAATT 59.773 37.037 15.04 1.59 0.00 1.40
1022 2435 6.706270 CAGCTTCAGTATTACCGGTTGATAAT 59.294 38.462 15.04 9.23 0.00 1.28
1024 2437 5.452776 CCAGCTTCAGTATTACCGGTTGATA 60.453 44.000 15.04 9.45 0.00 2.15
1025 2438 4.442706 CAGCTTCAGTATTACCGGTTGAT 58.557 43.478 15.04 10.59 0.00 2.57
1026 2439 3.369052 CCAGCTTCAGTATTACCGGTTGA 60.369 47.826 15.04 7.22 0.00 3.18
1028 2441 2.835764 TCCAGCTTCAGTATTACCGGTT 59.164 45.455 15.04 0.00 0.00 4.44
1029 2442 2.431057 CTCCAGCTTCAGTATTACCGGT 59.569 50.000 13.98 13.98 0.00 5.28
1030 2443 2.693591 TCTCCAGCTTCAGTATTACCGG 59.306 50.000 0.00 0.00 0.00 5.28
1031 2444 4.386867 TTCTCCAGCTTCAGTATTACCG 57.613 45.455 0.00 0.00 0.00 4.02
1032 2445 5.918608 TCATTCTCCAGCTTCAGTATTACC 58.081 41.667 0.00 0.00 0.00 2.85
1041 2454 1.065564 AGCCACTCATTCTCCAGCTTC 60.066 52.381 0.00 0.00 0.00 3.86
1044 2457 0.747283 CCAGCCACTCATTCTCCAGC 60.747 60.000 0.00 0.00 0.00 4.85
1049 2462 1.599047 CGGACCAGCCACTCATTCT 59.401 57.895 0.00 0.00 35.94 2.40
1060 2473 4.394712 GACCAGTGCCCGGACCAG 62.395 72.222 0.73 0.00 0.00 4.00
1091 2504 1.078759 GACCAGGACAAGATGCGTCG 61.079 60.000 0.00 0.00 34.04 5.12
1135 2548 4.389576 GCACAAACCGCTGGCTCG 62.390 66.667 0.00 0.00 0.00 5.03
1142 2555 1.569479 GAGTCCTCTGCACAAACCGC 61.569 60.000 0.00 0.00 0.00 5.68
1143 2556 0.951040 GGAGTCCTCTGCACAAACCG 60.951 60.000 0.41 0.00 32.20 4.44
1147 2560 0.394192 CACAGGAGTCCTCTGCACAA 59.606 55.000 9.36 0.00 35.78 3.33
1150 2563 0.764369 AACCACAGGAGTCCTCTGCA 60.764 55.000 9.36 0.00 35.78 4.41
1154 2567 2.640316 ACAAAACCACAGGAGTCCTC 57.360 50.000 9.36 0.00 0.00 3.71
1172 2585 1.244019 CCAGCTTGCCACCTGGTAAC 61.244 60.000 0.00 0.00 42.87 2.50
1185 2598 2.776526 TGTGTCCCCACCCAGCTT 60.777 61.111 0.00 0.00 41.09 3.74
1186 2599 3.570212 GTGTGTCCCCACCCAGCT 61.570 66.667 0.00 0.00 41.09 4.24
1193 2606 1.195115 GCTGATAGAGTGTGTCCCCA 58.805 55.000 0.00 0.00 0.00 4.96
1196 2609 2.234908 AGGTTGCTGATAGAGTGTGTCC 59.765 50.000 0.00 0.00 0.00 4.02
1202 2615 3.191078 GCATGAGGTTGCTGATAGAGT 57.809 47.619 0.00 0.00 39.57 3.24
1228 2641 1.899437 TTCTCCCTGGATGTGACGGC 61.899 60.000 0.00 0.00 0.00 5.68
1229 2642 0.176680 CTTCTCCCTGGATGTGACGG 59.823 60.000 0.00 0.00 0.00 4.79
1236 2649 1.919600 GCAGGTGCTTCTCCCTGGAT 61.920 60.000 7.72 0.00 46.83 3.41
1242 2655 3.426568 GCGTGCAGGTGCTTCTCC 61.427 66.667 8.40 0.00 42.66 3.71
1243 2656 3.426568 GGCGTGCAGGTGCTTCTC 61.427 66.667 8.40 0.00 42.66 2.87
1246 2659 3.289834 CAAGGCGTGCAGGTGCTT 61.290 61.111 8.40 0.00 42.66 3.91
1263 2676 1.194781 TGAGCAGGAAGGGAGTCCAC 61.195 60.000 12.30 0.06 40.48 4.02
1336 2749 3.052082 CAGTTGCCGGCCTGACAG 61.052 66.667 26.77 13.06 0.00 3.51
1363 2776 2.839632 TCCGCTGATCTGCCCGAT 60.840 61.111 17.78 0.00 34.25 4.18
1364 2777 3.531207 CTCCGCTGATCTGCCCGA 61.531 66.667 17.78 12.49 0.00 5.14
1367 2780 2.104572 TATGGCTCCGCTGATCTGCC 62.105 60.000 17.78 10.27 43.49 4.85
1372 2785 3.521126 AGGATAAATATGGCTCCGCTGAT 59.479 43.478 0.00 0.00 32.87 2.90
1375 2788 2.639839 ACAGGATAAATATGGCTCCGCT 59.360 45.455 0.00 0.00 32.87 5.52
1376 2789 3.059352 ACAGGATAAATATGGCTCCGC 57.941 47.619 0.00 0.00 32.87 5.54
1386 2799 9.965902 AAGATGAAGTTCTTGTACAGGATAAAT 57.034 29.630 8.68 0.00 34.68 1.40
1387 2800 9.436957 GAAGATGAAGTTCTTGTACAGGATAAA 57.563 33.333 8.68 0.00 36.10 1.40
1389 2802 7.093902 ACGAAGATGAAGTTCTTGTACAGGATA 60.094 37.037 8.68 0.00 36.10 2.59
1390 2803 6.102663 CGAAGATGAAGTTCTTGTACAGGAT 58.897 40.000 8.68 0.00 36.10 3.24
1391 2804 5.010719 ACGAAGATGAAGTTCTTGTACAGGA 59.989 40.000 3.11 3.11 36.10 3.86
1397 2810 3.318017 CGGACGAAGATGAAGTTCTTGT 58.682 45.455 4.17 0.00 36.10 3.16
1402 2815 2.738147 CGCGGACGAAGATGAAGTT 58.262 52.632 0.00 0.00 43.93 2.66
1445 2858 0.824759 GAACATGAGGTAGGACGCCT 59.175 55.000 0.00 3.87 39.42 5.52
1450 2863 2.187958 CAGGGTGAACATGAGGTAGGA 58.812 52.381 0.00 0.00 0.00 2.94
1477 2890 4.453478 CCACACACTCTCTACGTACTTGTA 59.547 45.833 0.00 0.00 0.00 2.41
1478 2891 3.252701 CCACACACTCTCTACGTACTTGT 59.747 47.826 0.00 0.00 0.00 3.16
1486 2899 1.446272 GCGCCCACACACTCTCTAC 60.446 63.158 0.00 0.00 0.00 2.59
1505 2918 0.116342 TCCCAGACTACCTTGCCAGA 59.884 55.000 0.00 0.00 0.00 3.86
1506 2919 0.984230 TTCCCAGACTACCTTGCCAG 59.016 55.000 0.00 0.00 0.00 4.85
1507 2920 0.690762 GTTCCCAGACTACCTTGCCA 59.309 55.000 0.00 0.00 0.00 4.92
1515 2928 0.689745 CCCGGATGGTTCCCAGACTA 60.690 60.000 0.73 0.00 39.01 2.59
1517 2930 2.590092 CCCGGATGGTTCCCAGAC 59.410 66.667 0.73 0.00 39.01 3.51
1524 2937 1.211567 TGATTGACCCCCGGATGGTT 61.212 55.000 15.71 1.78 35.85 3.67
1534 2947 2.948315 GCTTCATCTCCTTGATTGACCC 59.052 50.000 0.00 0.00 32.05 4.46
1546 2959 2.026822 TCAGAACCTTGGGCTTCATCTC 60.027 50.000 0.00 0.00 0.00 2.75
1558 2971 1.130054 TCTGCAGGGCTCAGAACCTT 61.130 55.000 15.13 0.00 37.61 3.50
1562 2975 1.123861 ACACTCTGCAGGGCTCAGAA 61.124 55.000 15.27 0.00 39.77 3.02
1563 2976 0.251787 TACACTCTGCAGGGCTCAGA 60.252 55.000 15.27 0.00 38.16 3.27
1570 2983 2.839486 TGGACTTTACACTCTGCAGG 57.161 50.000 15.13 7.28 0.00 4.85
1571 2984 3.005554 CCATGGACTTTACACTCTGCAG 58.994 50.000 5.56 7.63 0.00 4.41
1590 3003 1.021202 CTTGCTCGTTGTCCAAACCA 58.979 50.000 0.00 0.00 0.00 3.67
1593 3006 0.465460 AGGCTTGCTCGTTGTCCAAA 60.465 50.000 0.00 0.00 0.00 3.28
1596 3009 1.576421 CAAGGCTTGCTCGTTGTCC 59.424 57.895 15.25 0.00 0.00 4.02
1618 3031 1.000731 GTGCAGCAGTTTATGGGCAAA 59.999 47.619 0.00 0.00 32.50 3.68
1627 3040 1.454572 TTGCCGATGTGCAGCAGTTT 61.455 50.000 0.00 0.00 43.21 2.66
1628 3041 1.859427 CTTGCCGATGTGCAGCAGTT 61.859 55.000 0.00 0.00 43.21 3.16
1629 3042 2.281692 TTGCCGATGTGCAGCAGT 60.282 55.556 0.00 0.00 43.21 4.40
1632 3045 3.818787 CCCTTGCCGATGTGCAGC 61.819 66.667 0.00 0.00 43.21 5.25
1643 3056 4.362476 CCGCAAAGGCACCCTTGC 62.362 66.667 12.16 12.16 43.92 4.01
1669 3082 1.545582 CACCACCGGCTTCAAAATGAT 59.454 47.619 0.00 0.00 0.00 2.45
1673 3086 0.821711 CCTCACCACCGGCTTCAAAA 60.822 55.000 0.00 0.00 0.00 2.44
1687 3100 4.870426 TCTTATTTCATCTTGACGCCTCAC 59.130 41.667 0.00 0.00 0.00 3.51
1688 3101 5.084818 TCTTATTTCATCTTGACGCCTCA 57.915 39.130 0.00 0.00 0.00 3.86
1689 3102 4.025313 GCTCTTATTTCATCTTGACGCCTC 60.025 45.833 0.00 0.00 0.00 4.70
1690 3103 3.873952 GCTCTTATTTCATCTTGACGCCT 59.126 43.478 0.00 0.00 0.00 5.52
1692 3105 3.873952 AGGCTCTTATTTCATCTTGACGC 59.126 43.478 0.00 0.00 0.00 5.19
1694 3107 6.458070 GCAGAAGGCTCTTATTTCATCTTGAC 60.458 42.308 0.00 0.00 40.25 3.18
1695 3108 5.587844 GCAGAAGGCTCTTATTTCATCTTGA 59.412 40.000 0.00 0.00 40.25 3.02
1698 3111 4.080129 TGGCAGAAGGCTCTTATTTCATCT 60.080 41.667 0.00 0.00 44.01 2.90
1701 3114 3.719268 TGGCAGAAGGCTCTTATTTCA 57.281 42.857 0.00 0.00 44.01 2.69
1702 3115 4.886489 AGATTGGCAGAAGGCTCTTATTTC 59.114 41.667 0.00 0.00 44.01 2.17
1722 3153 1.067295 TGTCCTGCCAACCTTCAGAT 58.933 50.000 0.00 0.00 32.26 2.90
1726 3157 0.883833 CACATGTCCTGCCAACCTTC 59.116 55.000 0.00 0.00 0.00 3.46
1866 3297 0.603707 CGGACCAGAAGAGCAGCAAA 60.604 55.000 0.00 0.00 0.00 3.68
2012 3443 1.298563 CAATGTTGCGGCCTATGCG 60.299 57.895 0.00 0.00 38.85 4.73
2020 3451 0.597568 TGAAGAAGCCAATGTTGCGG 59.402 50.000 0.00 0.00 0.00 5.69
2025 3456 2.549754 CGAACAGTGAAGAAGCCAATGT 59.450 45.455 0.00 0.00 43.48 2.71
2026 3457 2.666619 GCGAACAGTGAAGAAGCCAATG 60.667 50.000 0.00 0.00 35.92 2.82
2027 3458 1.537202 GCGAACAGTGAAGAAGCCAAT 59.463 47.619 0.00 0.00 0.00 3.16
2028 3459 0.944386 GCGAACAGTGAAGAAGCCAA 59.056 50.000 0.00 0.00 0.00 4.52
2029 3460 0.106708 AGCGAACAGTGAAGAAGCCA 59.893 50.000 0.00 0.00 0.00 4.75
2030 3461 0.514691 CAGCGAACAGTGAAGAAGCC 59.485 55.000 0.00 0.00 0.00 4.35
2031 3462 0.514691 CCAGCGAACAGTGAAGAAGC 59.485 55.000 0.00 0.00 0.00 3.86
2032 3463 1.151668 CCCAGCGAACAGTGAAGAAG 58.848 55.000 0.00 0.00 0.00 2.85
2035 3466 0.671781 CTCCCCAGCGAACAGTGAAG 60.672 60.000 0.00 0.00 0.00 3.02
2036 3467 1.118965 TCTCCCCAGCGAACAGTGAA 61.119 55.000 0.00 0.00 0.00 3.18
2037 3468 0.904865 ATCTCCCCAGCGAACAGTGA 60.905 55.000 0.00 0.00 0.00 3.41
2041 3472 2.268920 GCATCTCCCCAGCGAACA 59.731 61.111 0.00 0.00 0.00 3.18
2042 3473 2.514824 GGCATCTCCCCAGCGAAC 60.515 66.667 0.00 0.00 0.00 3.95
2043 3474 2.329539 GATGGCATCTCCCCAGCGAA 62.330 60.000 20.08 0.00 35.48 4.70
2101 3532 4.378046 CGACCACAACCTGTATTTAGTTGC 60.378 45.833 2.21 0.00 43.68 4.17
2108 3539 0.322187 GCCCGACCACAACCTGTATT 60.322 55.000 0.00 0.00 0.00 1.89
2109 3540 1.298667 GCCCGACCACAACCTGTAT 59.701 57.895 0.00 0.00 0.00 2.29
2129 3560 0.680921 CAGGTTGTACTGCCCCATGG 60.681 60.000 4.14 4.14 0.00 3.66
2237 3668 0.750850 TAGTACAATGCCCTCGGAGC 59.249 55.000 0.00 0.00 0.00 4.70
2245 3676 4.199310 ACACATGGTGATAGTACAATGCC 58.801 43.478 2.98 0.00 35.77 4.40
2252 3683 4.962362 AGTCCATGACACATGGTGATAGTA 59.038 41.667 24.00 6.38 40.06 1.82
2261 3692 2.507484 ACACCAAGTCCATGACACATG 58.493 47.619 0.00 4.94 34.60 3.21
2266 3697 2.270352 TGGAACACCAAGTCCATGAC 57.730 50.000 0.00 0.00 0.00 3.06
2270 3701 1.480312 CCCATTGGAACACCAAGTCCA 60.480 52.381 3.62 0.00 45.20 4.02
2280 3711 6.530019 AGAATTTCACATACCCATTGGAAC 57.470 37.500 3.62 0.00 34.81 3.62
2287 3718 6.071952 GCTTCTTCAAGAATTTCACATACCCA 60.072 38.462 0.00 0.00 33.13 4.51
2289 3720 6.151817 AGGCTTCTTCAAGAATTTCACATACC 59.848 38.462 0.00 0.00 33.13 2.73
2293 3724 5.010012 GGAAGGCTTCTTCAAGAATTTCACA 59.990 40.000 25.25 0.00 46.50 3.58
2295 3726 4.524328 GGGAAGGCTTCTTCAAGAATTTCA 59.476 41.667 25.25 0.00 46.50 2.69
2304 3735 0.987294 CCTCTGGGAAGGCTTCTTCA 59.013 55.000 25.25 20.90 46.50 3.02
2307 3738 3.502086 TTCCTCTGGGAAGGCTTCT 57.498 52.632 25.25 0.00 45.72 2.85
2316 3747 2.826488 TCTTCTTCCTCTTCCTCTGGG 58.174 52.381 0.00 0.00 0.00 4.45
2317 3748 4.093011 TCTTCTTCTTCCTCTTCCTCTGG 58.907 47.826 0.00 0.00 0.00 3.86
2318 3749 5.480073 TCTTCTTCTTCTTCCTCTTCCTCTG 59.520 44.000 0.00 0.00 0.00 3.35
2319 3750 5.650283 TCTTCTTCTTCTTCCTCTTCCTCT 58.350 41.667 0.00 0.00 0.00 3.69
2320 3751 5.993748 TCTTCTTCTTCTTCCTCTTCCTC 57.006 43.478 0.00 0.00 0.00 3.71
2321 3752 6.081356 TCTTCTTCTTCTTCTTCCTCTTCCT 58.919 40.000 0.00 0.00 0.00 3.36
2322 3753 6.353404 TCTTCTTCTTCTTCTTCCTCTTCC 57.647 41.667 0.00 0.00 0.00 3.46
2323 3754 7.666623 TCTTCTTCTTCTTCTTCTTCCTCTTC 58.333 38.462 0.00 0.00 0.00 2.87
2324 3755 7.610580 TCTTCTTCTTCTTCTTCTTCCTCTT 57.389 36.000 0.00 0.00 0.00 2.85
2325 3756 7.508977 TCTTCTTCTTCTTCTTCTTCTTCCTCT 59.491 37.037 0.00 0.00 0.00 3.69
2326 3757 7.666623 TCTTCTTCTTCTTCTTCTTCTTCCTC 58.333 38.462 0.00 0.00 0.00 3.71
2327 3758 7.610580 TCTTCTTCTTCTTCTTCTTCTTCCT 57.389 36.000 0.00 0.00 0.00 3.36
2328 3759 8.147704 TCTTCTTCTTCTTCTTCTTCTTCTTCC 58.852 37.037 0.00 0.00 0.00 3.46
2367 3798 8.923270 TCTTCTTCTTCTTCTTCTTCTTCTTCT 58.077 33.333 0.00 0.00 0.00 2.85
2370 3801 8.150296 CCTTCTTCTTCTTCTTCTTCTTCTTCT 58.850 37.037 0.00 0.00 0.00 2.85
2373 3804 7.610580 TCCTTCTTCTTCTTCTTCTTCTTCT 57.389 36.000 0.00 0.00 0.00 2.85
2376 3807 7.130681 TGTTCCTTCTTCTTCTTCTTCTTCT 57.869 36.000 0.00 0.00 0.00 2.85
2386 3817 5.402867 CGTCTGTACTTGTTCCTTCTTCTTC 59.597 44.000 0.00 0.00 0.00 2.87
2393 3824 4.931661 TCTTCGTCTGTACTTGTTCCTT 57.068 40.909 0.00 0.00 0.00 3.36
2398 3829 5.050091 CAGCAATTTCTTCGTCTGTACTTGT 60.050 40.000 0.00 0.00 0.00 3.16
2426 3857 1.735571 CGGTAATTTTGGAGGTCACCG 59.264 52.381 0.00 0.00 41.12 4.94
2427 3858 1.471287 GCGGTAATTTTGGAGGTCACC 59.529 52.381 0.00 0.00 0.00 4.02
2434 3865 2.734276 GCTTTGGCGGTAATTTTGGA 57.266 45.000 0.00 0.00 0.00 3.53
2455 3898 2.289506 GGCCGGTCTCCATACCTATTTC 60.290 54.545 1.90 0.00 37.39 2.17
2469 3912 2.190578 CTTGGATCTGGGCCGGTC 59.809 66.667 13.14 0.00 0.00 4.79
2511 3954 4.881850 CCGATACCAAGAACTTTGCCTAAT 59.118 41.667 0.00 0.00 0.00 1.73
2536 3979 2.362242 CCAACTCTGGGAACTCGGA 58.638 57.895 0.00 0.00 39.30 4.55
2605 4048 3.818787 GCTGCCGGATGCTGTTGG 61.819 66.667 5.05 0.00 42.00 3.77
2640 4083 1.957562 CCCCTGTATAGCCTCGACG 59.042 63.158 0.00 0.00 0.00 5.12
2649 4092 2.154567 AGTTCGACAGCCCCTGTATA 57.845 50.000 0.00 0.00 45.44 1.47
2835 4285 2.434359 GTCGCTGCCGCTACCTTT 60.434 61.111 0.00 0.00 0.00 3.11
2843 4293 2.887568 GATGGTCAGTCGCTGCCG 60.888 66.667 0.00 0.00 32.91 5.69
2846 4296 0.459237 GTGGAGATGGTCAGTCGCTG 60.459 60.000 1.02 1.02 0.00 5.18
2870 4320 3.279183 CCGAGAGAACGGCACTCT 58.721 61.111 7.74 7.74 46.20 3.24
2878 4337 2.094649 AGAACGTTCCATCCGAGAGAAC 60.095 50.000 24.22 0.00 0.00 3.01
2968 4427 0.177604 CATCTGTCCTGGTGCTCCTC 59.822 60.000 6.34 0.00 34.23 3.71
2977 4436 1.517832 GTCCGGTCCATCTGTCCTG 59.482 63.158 0.00 0.00 0.00 3.86
2991 4450 1.425412 CCAAAGTACGAAGTGGTCCG 58.575 55.000 0.00 0.00 45.73 4.79
3015 4474 0.533308 TGACGTTGTGGTACAAGCCC 60.533 55.000 0.00 0.00 44.16 5.19
3022 4481 1.134340 AGGCTTGTTGACGTTGTGGTA 60.134 47.619 0.00 0.00 0.00 3.25
3031 4490 1.467734 CATCTGCAGAGGCTTGTTGAC 59.532 52.381 22.96 0.00 41.91 3.18
3034 4493 0.694771 TCCATCTGCAGAGGCTTGTT 59.305 50.000 22.68 0.00 41.91 2.83
3038 4497 3.644719 CCTCCATCTGCAGAGGCT 58.355 61.111 22.68 2.20 43.11 4.58
3046 4507 3.036819 TCTCCAACATCTCCTCCATCTG 58.963 50.000 0.00 0.00 0.00 2.90
3080 4541 3.869272 CGAGCAAGCGCACCCATC 61.869 66.667 11.47 0.00 42.27 3.51
3154 4615 2.048127 GACAGTGGTGAGGTCGCC 60.048 66.667 2.37 2.37 46.40 5.54
3168 4629 1.737735 CGCAAGCATCCAGACGACA 60.738 57.895 0.00 0.00 0.00 4.35
3186 4647 0.796312 CATATATGCCGGCGTGTTCC 59.204 55.000 31.45 0.00 0.00 3.62
3187 4648 0.796312 CCATATATGCCGGCGTGTTC 59.204 55.000 31.45 0.00 0.00 3.18
3203 4664 2.898920 CTTGTCTGCCCGGATGCCAT 62.899 60.000 0.73 0.00 0.00 4.40
3205 4666 2.825836 CTTGTCTGCCCGGATGCC 60.826 66.667 0.73 0.00 0.00 4.40
3208 4669 1.115467 CTAGTCTTGTCTGCCCGGAT 58.885 55.000 0.73 0.00 0.00 4.18
3260 4739 1.650912 GCAACACAGTCACAGGCTG 59.349 57.895 14.16 14.16 39.67 4.85
3263 4742 0.530650 AGACGCAACACAGTCACAGG 60.531 55.000 0.00 0.00 39.67 4.00
3295 4774 4.339247 AGGCGCTTCATAATGCTGTTTAAT 59.661 37.500 7.64 0.00 0.00 1.40
3301 4780 0.309922 CCAGGCGCTTCATAATGCTG 59.690 55.000 7.64 2.09 0.00 4.41
3335 4814 4.262249 GCTGACTGAGACCAAACTAAGTCT 60.262 45.833 12.53 0.00 44.48 3.24
3338 4817 4.264460 AGCTGACTGAGACCAAACTAAG 57.736 45.455 0.00 0.00 0.00 2.18
3372 4851 0.599558 TACAAGTCTACCAGCGCGTT 59.400 50.000 8.43 0.00 0.00 4.84
3375 4854 1.000145 GCTTACAAGTCTACCAGCGC 59.000 55.000 0.00 0.00 0.00 5.92
3384 4863 3.741344 ACGAGACAACATGCTTACAAGTC 59.259 43.478 0.00 0.00 0.00 3.01
3395 4874 3.869246 ACGTGAAGAAAACGAGACAACAT 59.131 39.130 2.62 0.00 43.68 2.71
3423 4902 3.474304 CCACAACGCACAAAACAAAAAC 58.526 40.909 0.00 0.00 0.00 2.43
3428 4907 0.603569 AACCCACAACGCACAAAACA 59.396 45.000 0.00 0.00 0.00 2.83
3458 4938 4.156008 GCCGAATATCAACCCCATGTTATC 59.844 45.833 0.00 0.00 34.69 1.75
3459 4939 4.079253 GCCGAATATCAACCCCATGTTAT 58.921 43.478 0.00 0.00 34.69 1.89
3460 4940 3.137544 AGCCGAATATCAACCCCATGTTA 59.862 43.478 0.00 0.00 34.69 2.41
3461 4941 2.091885 AGCCGAATATCAACCCCATGTT 60.092 45.455 0.00 0.00 37.80 2.71
3463 4943 1.881973 CAGCCGAATATCAACCCCATG 59.118 52.381 0.00 0.00 0.00 3.66
3464 4944 1.494721 ACAGCCGAATATCAACCCCAT 59.505 47.619 0.00 0.00 0.00 4.00
3465 4945 0.916086 ACAGCCGAATATCAACCCCA 59.084 50.000 0.00 0.00 0.00 4.96
3466 4946 1.676006 CAACAGCCGAATATCAACCCC 59.324 52.381 0.00 0.00 0.00 4.95
3512 4992 3.001127 GTCACAACACAAATGCGCAAAAT 59.999 39.130 17.11 0.00 0.00 1.82
3516 4996 0.248825 GGTCACAACACAAATGCGCA 60.249 50.000 14.96 14.96 0.00 6.09
3517 4997 0.248825 TGGTCACAACACAAATGCGC 60.249 50.000 0.00 0.00 0.00 6.09
3518 4998 2.200792 TTGGTCACAACACAAATGCG 57.799 45.000 0.00 0.00 0.00 4.73
3519 4999 3.257393 TGTTTGGTCACAACACAAATGC 58.743 40.909 0.00 0.00 36.60 3.56
3520 5000 4.562394 GTCTGTTTGGTCACAACACAAATG 59.438 41.667 0.00 0.00 36.60 2.32
3521 5001 4.381505 GGTCTGTTTGGTCACAACACAAAT 60.382 41.667 0.00 0.00 36.60 2.32
3525 5005 2.365582 AGGTCTGTTTGGTCACAACAC 58.634 47.619 0.00 0.00 36.06 3.32
3527 5007 3.013921 TGAAGGTCTGTTTGGTCACAAC 58.986 45.455 0.00 0.00 36.06 3.32
3531 5024 3.644966 AGTTGAAGGTCTGTTTGGTCA 57.355 42.857 0.00 0.00 0.00 4.02
3548 5041 4.079787 ACATTCCAGGCCACATACATAGTT 60.080 41.667 5.01 0.00 0.00 2.24
3551 5044 3.457749 TCACATTCCAGGCCACATACATA 59.542 43.478 5.01 0.00 0.00 2.29
3595 5088 7.176515 ACAAAGAAAAAGTGAAATGCCCTTTTT 59.823 29.630 8.57 8.57 45.86 1.94
3632 5219 4.438744 GCACAACATAGCCATCTTGTTACC 60.439 45.833 0.00 0.00 32.57 2.85
3636 5223 3.077484 AGCACAACATAGCCATCTTGT 57.923 42.857 0.00 0.00 0.00 3.16
3695 5288 4.227300 TGTGGAGGCCTTAGACAAATGTAT 59.773 41.667 6.77 0.00 0.00 2.29
3735 5328 9.481340 GCCAGATTTCTTTTCTTTTCATACTTT 57.519 29.630 0.00 0.00 0.00 2.66
3736 5329 8.090831 GGCCAGATTTCTTTTCTTTTCATACTT 58.909 33.333 0.00 0.00 0.00 2.24
3737 5330 7.452813 AGGCCAGATTTCTTTTCTTTTCATACT 59.547 33.333 5.01 0.00 0.00 2.12
3738 5331 7.606349 AGGCCAGATTTCTTTTCTTTTCATAC 58.394 34.615 5.01 0.00 0.00 2.39
3739 5332 7.781324 AGGCCAGATTTCTTTTCTTTTCATA 57.219 32.000 5.01 0.00 0.00 2.15
3740 5333 6.676990 AGGCCAGATTTCTTTTCTTTTCAT 57.323 33.333 5.01 0.00 0.00 2.57
3741 5334 6.549364 TGTAGGCCAGATTTCTTTTCTTTTCA 59.451 34.615 5.01 0.00 0.00 2.69
3742 5335 6.981722 TGTAGGCCAGATTTCTTTTCTTTTC 58.018 36.000 5.01 0.00 0.00 2.29
3743 5336 6.976934 TGTAGGCCAGATTTCTTTTCTTTT 57.023 33.333 5.01 0.00 0.00 2.27
3744 5337 6.721208 TGATGTAGGCCAGATTTCTTTTCTTT 59.279 34.615 5.01 0.00 0.00 2.52
3745 5338 6.248433 TGATGTAGGCCAGATTTCTTTTCTT 58.752 36.000 5.01 0.00 0.00 2.52
3746 5339 5.819991 TGATGTAGGCCAGATTTCTTTTCT 58.180 37.500 5.01 0.00 0.00 2.52
3747 5340 6.515272 TTGATGTAGGCCAGATTTCTTTTC 57.485 37.500 5.01 0.00 0.00 2.29
3748 5341 6.295292 GGTTTGATGTAGGCCAGATTTCTTTT 60.295 38.462 5.01 0.00 0.00 2.27
3749 5342 5.185828 GGTTTGATGTAGGCCAGATTTCTTT 59.814 40.000 5.01 0.00 0.00 2.52
3750 5343 4.706962 GGTTTGATGTAGGCCAGATTTCTT 59.293 41.667 5.01 0.00 0.00 2.52
3751 5344 4.018050 AGGTTTGATGTAGGCCAGATTTCT 60.018 41.667 5.01 0.00 0.00 2.52
3752 5345 4.096984 CAGGTTTGATGTAGGCCAGATTTC 59.903 45.833 5.01 0.00 0.00 2.17
3753 5346 4.019174 CAGGTTTGATGTAGGCCAGATTT 58.981 43.478 5.01 0.00 0.00 2.17
3754 5347 3.266772 TCAGGTTTGATGTAGGCCAGATT 59.733 43.478 5.01 0.00 0.00 2.40
3755 5348 2.846206 TCAGGTTTGATGTAGGCCAGAT 59.154 45.455 5.01 0.00 0.00 2.90
3756 5349 2.237143 CTCAGGTTTGATGTAGGCCAGA 59.763 50.000 5.01 0.00 31.68 3.86
3757 5350 2.237143 TCTCAGGTTTGATGTAGGCCAG 59.763 50.000 5.01 0.00 31.68 4.85
3758 5351 2.237143 CTCTCAGGTTTGATGTAGGCCA 59.763 50.000 5.01 0.00 31.68 5.36
3759 5352 2.237392 ACTCTCAGGTTTGATGTAGGCC 59.763 50.000 0.00 0.00 31.68 5.19
3760 5353 3.265791 CACTCTCAGGTTTGATGTAGGC 58.734 50.000 0.00 0.00 31.68 3.93
3761 5354 4.543590 ACACTCTCAGGTTTGATGTAGG 57.456 45.455 0.00 0.00 31.68 3.18
3762 5355 4.153117 GCAACACTCTCAGGTTTGATGTAG 59.847 45.833 0.00 0.00 31.68 2.74
3763 5356 4.065088 GCAACACTCTCAGGTTTGATGTA 58.935 43.478 0.00 0.00 31.68 2.29
3764 5357 2.880890 GCAACACTCTCAGGTTTGATGT 59.119 45.455 0.00 0.00 31.68 3.06
3765 5358 2.096069 CGCAACACTCTCAGGTTTGATG 60.096 50.000 0.00 0.00 31.68 3.07
3766 5359 2.146342 CGCAACACTCTCAGGTTTGAT 58.854 47.619 0.00 0.00 31.68 2.57
3767 5360 1.138069 TCGCAACACTCTCAGGTTTGA 59.862 47.619 0.00 0.00 0.00 2.69
3768 5361 1.581934 TCGCAACACTCTCAGGTTTG 58.418 50.000 0.00 0.00 0.00 2.93
3769 5362 2.146342 CATCGCAACACTCTCAGGTTT 58.854 47.619 0.00 0.00 0.00 3.27
3770 5363 1.344438 TCATCGCAACACTCTCAGGTT 59.656 47.619 0.00 0.00 0.00 3.50
3771 5364 0.969149 TCATCGCAACACTCTCAGGT 59.031 50.000 0.00 0.00 0.00 4.00
3772 5365 1.931841 CATCATCGCAACACTCTCAGG 59.068 52.381 0.00 0.00 0.00 3.86
3773 5366 2.602211 GTCATCATCGCAACACTCTCAG 59.398 50.000 0.00 0.00 0.00 3.35
3774 5367 2.029110 TGTCATCATCGCAACACTCTCA 60.029 45.455 0.00 0.00 0.00 3.27
3775 5368 2.610433 TGTCATCATCGCAACACTCTC 58.390 47.619 0.00 0.00 0.00 3.20
3776 5369 2.749280 TGTCATCATCGCAACACTCT 57.251 45.000 0.00 0.00 0.00 3.24
3777 5370 4.093514 CAATTGTCATCATCGCAACACTC 58.906 43.478 0.00 0.00 0.00 3.51
3778 5371 3.671433 GCAATTGTCATCATCGCAACACT 60.671 43.478 7.40 0.00 0.00 3.55
3779 5372 2.595536 GCAATTGTCATCATCGCAACAC 59.404 45.455 7.40 0.00 0.00 3.32
3780 5373 2.728535 CGCAATTGTCATCATCGCAACA 60.729 45.455 7.40 0.00 0.00 3.33
3781 5374 1.841944 CGCAATTGTCATCATCGCAAC 59.158 47.619 7.40 0.00 0.00 4.17
3782 5375 1.736681 TCGCAATTGTCATCATCGCAA 59.263 42.857 7.40 0.00 0.00 4.85
3783 5376 1.328374 CTCGCAATTGTCATCATCGCA 59.672 47.619 7.40 0.00 0.00 5.10
3784 5377 1.328680 ACTCGCAATTGTCATCATCGC 59.671 47.619 7.40 0.00 0.00 4.58
3785 5378 3.798878 ACTACTCGCAATTGTCATCATCG 59.201 43.478 7.40 0.11 0.00 3.84
3786 5379 5.175856 GGTACTACTCGCAATTGTCATCATC 59.824 44.000 7.40 0.00 0.00 2.92
3787 5380 5.050490 GGTACTACTCGCAATTGTCATCAT 58.950 41.667 7.40 0.00 0.00 2.45
3788 5381 4.430007 GGTACTACTCGCAATTGTCATCA 58.570 43.478 7.40 0.00 0.00 3.07
3789 5382 3.802685 GGGTACTACTCGCAATTGTCATC 59.197 47.826 7.40 0.00 0.00 2.92
3790 5383 3.196901 TGGGTACTACTCGCAATTGTCAT 59.803 43.478 7.40 0.00 0.00 3.06
3791 5384 2.563620 TGGGTACTACTCGCAATTGTCA 59.436 45.455 7.40 0.00 0.00 3.58
3792 5385 3.241067 TGGGTACTACTCGCAATTGTC 57.759 47.619 7.40 0.00 0.00 3.18
3793 5386 3.596214 CTTGGGTACTACTCGCAATTGT 58.404 45.455 7.40 0.00 37.18 2.71
3794 5387 2.351726 GCTTGGGTACTACTCGCAATTG 59.648 50.000 0.00 0.00 37.18 2.32
3795 5388 2.629051 GCTTGGGTACTACTCGCAATT 58.371 47.619 0.00 0.00 37.18 2.32
3796 5389 1.134491 GGCTTGGGTACTACTCGCAAT 60.134 52.381 0.00 0.00 37.18 3.56
3797 5390 0.248289 GGCTTGGGTACTACTCGCAA 59.752 55.000 0.00 0.00 36.57 4.85
3798 5391 0.613853 AGGCTTGGGTACTACTCGCA 60.614 55.000 0.00 0.00 0.00 5.10
3799 5392 0.102663 GAGGCTTGGGTACTACTCGC 59.897 60.000 0.00 0.00 0.00 5.03
3800 5393 1.765230 AGAGGCTTGGGTACTACTCG 58.235 55.000 0.00 0.00 0.00 4.18
3801 5394 4.501743 GCAATAGAGGCTTGGGTACTACTC 60.502 50.000 0.00 0.00 0.00 2.59
3802 5395 3.388350 GCAATAGAGGCTTGGGTACTACT 59.612 47.826 0.00 0.00 0.00 2.57
3803 5396 3.134081 TGCAATAGAGGCTTGGGTACTAC 59.866 47.826 0.00 0.00 0.00 2.73
3804 5397 3.380393 TGCAATAGAGGCTTGGGTACTA 58.620 45.455 0.00 0.00 0.00 1.82
3805 5398 2.171448 CTGCAATAGAGGCTTGGGTACT 59.829 50.000 0.00 0.00 0.00 2.73
3806 5399 2.565841 CTGCAATAGAGGCTTGGGTAC 58.434 52.381 0.00 0.00 0.00 3.34
3823 5416 2.440409 TGGAGAGAAAATCTTGCCTGC 58.560 47.619 0.00 0.00 38.84 4.85
3832 5425 6.729428 AGTGGATGAATCTTGGAGAGAAAAT 58.271 36.000 0.00 0.00 38.06 1.82
3869 5462 0.397535 ATCCACAATCCACCATGGGC 60.398 55.000 18.09 0.00 38.32 5.36
3879 5472 0.168788 CACGTGCCACATCCACAATC 59.831 55.000 0.82 0.00 32.85 2.67
3916 5509 1.343681 ACAGCCGATTTCTACCCCCTA 60.344 52.381 0.00 0.00 0.00 3.53
3940 5533 0.603065 ATTTTCACGGAAAGCCTGCC 59.397 50.000 0.00 0.00 32.93 4.85
3941 5534 2.438868 AATTTTCACGGAAAGCCTGC 57.561 45.000 0.00 0.00 32.93 4.85
3969 5562 1.816224 GCACACGGGAATACAAACCAT 59.184 47.619 0.00 0.00 0.00 3.55
4016 5609 0.539438 GAGATGGCCCACACAAACCA 60.539 55.000 0.00 0.00 36.43 3.67
4050 5643 4.381292 GCAAAGCCTATTCTTCATGCAGTT 60.381 41.667 0.00 0.00 32.75 3.16
4097 5915 9.690913 ATTCAATCAATGTAGATGGAAGAGAAA 57.309 29.630 0.00 0.00 40.34 2.52
4140 5958 2.737359 CGCGGACCATTACAGCTAGAAA 60.737 50.000 0.00 0.00 0.00 2.52
4315 9671 3.139850 CTCAGGATTGCCTAATCAGCAG 58.860 50.000 0.00 0.00 44.80 4.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.