Multiple sequence alignment - TraesCS2B01G028800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G028800 chr2B 100.000 3420 0 0 1 3420 13347386 13343967 0.000000e+00 6316.0
1 TraesCS2B01G028800 chr2B 85.588 791 112 2 1690 2479 768806253 768805464 0.000000e+00 828.0
2 TraesCS2B01G028800 chr2B 82.151 930 149 10 777 1695 11400420 11401343 0.000000e+00 782.0
3 TraesCS2B01G028800 chr2B 84.391 788 121 2 1693 2479 768928671 768927885 0.000000e+00 773.0
4 TraesCS2B01G028800 chr2B 80.370 703 128 6 1000 1695 12942429 12943128 3.020000e-145 525.0
5 TraesCS2B01G028800 chr2B 87.736 106 7 5 100 203 601206946 601206845 6.000000e-23 119.0
6 TraesCS2B01G028800 chr2A 94.598 1740 74 12 1690 3420 9944818 9946546 0.000000e+00 2675.0
7 TraesCS2B01G028800 chr2A 95.521 960 36 6 740 1695 9943833 9944789 0.000000e+00 1528.0
8 TraesCS2B01G028800 chr2A 82.707 931 143 11 777 1695 7786279 7787203 0.000000e+00 811.0
9 TraesCS2B01G028800 chr2A 82.532 790 129 9 1692 2478 8628168 8628951 0.000000e+00 686.0
10 TraesCS2B01G028800 chr2A 81.762 806 137 9 1690 2490 9121259 9120459 0.000000e+00 665.0
11 TraesCS2B01G028800 chr2A 81.546 802 136 10 1690 2486 8631690 8632484 0.000000e+00 651.0
12 TraesCS2B01G028800 chr2A 82.345 708 110 10 999 1695 8630958 8631661 4.880000e-168 601.0
13 TraesCS2B01G028800 chr2D 82.277 931 146 12 777 1695 8683152 8684075 0.000000e+00 787.0
14 TraesCS2B01G028800 chr2D 83.333 804 117 9 1690 2490 8684104 8684893 0.000000e+00 726.0
15 TraesCS2B01G028800 chr2D 82.924 773 126 2 1690 2459 8671423 8672192 0.000000e+00 691.0
16 TraesCS2B01G028800 chr2D 82.025 790 133 8 1692 2478 9372259 9373042 0.000000e+00 664.0
17 TraesCS2B01G028800 chr2D 82.244 704 113 8 1000 1695 9588296 9588995 6.320000e-167 597.0
18 TraesCS2B01G028800 chr2D 81.092 751 127 7 958 1695 8479388 8478640 1.370000e-163 586.0
19 TraesCS2B01G028800 chr2D 82.111 682 112 5 999 1672 9380445 9381124 2.960000e-160 575.0
20 TraesCS2B01G028800 chr6D 88.350 103 8 2 103 205 422327411 422327509 1.670000e-23 121.0
21 TraesCS2B01G028800 chr6D 86.667 105 10 3 101 204 68866245 68866144 2.790000e-21 113.0
22 TraesCS2B01G028800 chr6D 80.531 113 17 5 2576 2685 190996790 190996680 7.870000e-12 82.4
23 TraesCS2B01G028800 chr5D 87.850 107 8 3 100 204 301216209 301216106 1.670000e-23 121.0
24 TraesCS2B01G028800 chr5D 86.792 106 10 2 100 204 266749353 266749455 7.760000e-22 115.0
25 TraesCS2B01G028800 chr1D 87.736 106 7 3 102 201 14482413 14482518 6.000000e-23 119.0
26 TraesCS2B01G028800 chr7A 86.916 107 8 5 101 205 61816020 61815918 7.760000e-22 115.0
27 TraesCS2B01G028800 chr7A 87.255 102 11 1 101 202 187113611 187113512 7.760000e-22 115.0
28 TraesCS2B01G028800 chr7A 86.111 108 11 3 96 202 406995416 406995312 2.790000e-21 113.0
29 TraesCS2B01G028800 chr4A 82.727 110 13 6 2585 2690 61025556 61025449 3.630000e-15 93.5
30 TraesCS2B01G028800 chr6B 81.250 112 16 5 2578 2686 126722442 126722333 6.080000e-13 86.1
31 TraesCS2B01G028800 chr6B 80.702 114 17 5 2578 2688 715971823 715971712 2.190000e-12 84.2
32 TraesCS2B01G028800 chr7B 81.905 105 14 5 2585 2686 106475796 106475694 2.190000e-12 84.2
33 TraesCS2B01G028800 chr7B 79.646 113 20 3 2577 2687 503120815 503120704 1.020000e-10 78.7
34 TraesCS2B01G028800 chr6A 80.531 113 19 3 2579 2689 272347674 272347785 2.190000e-12 84.2
35 TraesCS2B01G028800 chr5A 80.000 115 20 3 2577 2689 645336192 645336079 7.870000e-12 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G028800 chr2B 13343967 13347386 3419 True 6316.0 6316 100.0000 1 3420 1 chr2B.!!$R1 3419
1 TraesCS2B01G028800 chr2B 768805464 768806253 789 True 828.0 828 85.5880 1690 2479 1 chr2B.!!$R3 789
2 TraesCS2B01G028800 chr2B 11400420 11401343 923 False 782.0 782 82.1510 777 1695 1 chr2B.!!$F1 918
3 TraesCS2B01G028800 chr2B 768927885 768928671 786 True 773.0 773 84.3910 1693 2479 1 chr2B.!!$R4 786
4 TraesCS2B01G028800 chr2B 12942429 12943128 699 False 525.0 525 80.3700 1000 1695 1 chr2B.!!$F2 695
5 TraesCS2B01G028800 chr2A 9943833 9946546 2713 False 2101.5 2675 95.0595 740 3420 2 chr2A.!!$F3 2680
6 TraesCS2B01G028800 chr2A 7786279 7787203 924 False 811.0 811 82.7070 777 1695 1 chr2A.!!$F1 918
7 TraesCS2B01G028800 chr2A 9120459 9121259 800 True 665.0 665 81.7620 1690 2490 1 chr2A.!!$R1 800
8 TraesCS2B01G028800 chr2A 8628168 8632484 4316 False 646.0 686 82.1410 999 2486 3 chr2A.!!$F2 1487
9 TraesCS2B01G028800 chr2D 8683152 8684893 1741 False 756.5 787 82.8050 777 2490 2 chr2D.!!$F5 1713
10 TraesCS2B01G028800 chr2D 8671423 8672192 769 False 691.0 691 82.9240 1690 2459 1 chr2D.!!$F1 769
11 TraesCS2B01G028800 chr2D 9372259 9373042 783 False 664.0 664 82.0250 1692 2478 1 chr2D.!!$F2 786
12 TraesCS2B01G028800 chr2D 9588296 9588995 699 False 597.0 597 82.2440 1000 1695 1 chr2D.!!$F4 695
13 TraesCS2B01G028800 chr2D 8478640 8479388 748 True 586.0 586 81.0920 958 1695 1 chr2D.!!$R1 737
14 TraesCS2B01G028800 chr2D 9380445 9381124 679 False 575.0 575 82.1110 999 1672 1 chr2D.!!$F3 673

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
236 237 0.036306 ACCGAGGGAATTGCGTTTCT 59.964 50.0 0.0 0.0 0.00 2.52 F
709 710 0.036765 TACCATCACACACGCCCTTC 60.037 55.0 0.0 0.0 0.00 3.46 F
1205 3004 0.109913 TCAGGGATGATGATGCAGCC 59.890 55.0 0.0 0.0 43.45 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2137 3986 0.967380 CCACTGGATGGCCTTGTTCC 60.967 60.000 3.32 5.97 43.24 3.62 R
2364 4213 1.765904 TGGCACTACCTTCAAGTGTGA 59.234 47.619 5.25 0.00 45.01 3.58 R
2760 4611 1.134818 TGCATTACTGAGTGGCGGTAG 60.135 52.381 0.00 0.00 39.43 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 4.870363 TGCAACAGTTCTTTATTCAAGCC 58.130 39.130 0.00 0.00 31.70 4.35
23 24 4.584325 TGCAACAGTTCTTTATTCAAGCCT 59.416 37.500 0.00 0.00 31.70 4.58
26 27 5.695851 ACAGTTCTTTATTCAAGCCTGTG 57.304 39.130 0.00 0.00 40.30 3.66
27 28 5.376625 ACAGTTCTTTATTCAAGCCTGTGA 58.623 37.500 0.00 0.00 40.30 3.58
28 29 5.827797 ACAGTTCTTTATTCAAGCCTGTGAA 59.172 36.000 0.00 0.00 40.30 3.18
29 30 6.145535 CAGTTCTTTATTCAAGCCTGTGAAC 58.854 40.000 0.00 0.00 40.22 3.18
30 31 6.016777 CAGTTCTTTATTCAAGCCTGTGAACT 60.017 38.462 0.00 0.00 40.22 3.01
31 32 7.173218 CAGTTCTTTATTCAAGCCTGTGAACTA 59.827 37.037 0.00 0.00 40.22 2.24
32 33 7.719633 AGTTCTTTATTCAAGCCTGTGAACTAA 59.280 33.333 0.00 0.00 40.22 2.24
34 35 5.880054 TTATTCAAGCCTGTGAACTAAGC 57.120 39.130 0.00 0.00 40.22 3.09
35 36 2.185004 TCAAGCCTGTGAACTAAGCC 57.815 50.000 0.00 0.00 0.00 4.35
36 37 1.419762 TCAAGCCTGTGAACTAAGCCA 59.580 47.619 0.00 0.00 0.00 4.75
37 38 1.537202 CAAGCCTGTGAACTAAGCCAC 59.463 52.381 0.00 0.00 0.00 5.01
38 39 0.764890 AGCCTGTGAACTAAGCCACA 59.235 50.000 0.00 0.00 40.56 4.17
39 40 1.352352 AGCCTGTGAACTAAGCCACAT 59.648 47.619 0.00 0.00 41.75 3.21
40 41 1.470098 GCCTGTGAACTAAGCCACATG 59.530 52.381 0.00 0.00 41.75 3.21
41 42 1.470098 CCTGTGAACTAAGCCACATGC 59.530 52.381 0.00 0.00 41.75 4.06
42 43 2.153645 CTGTGAACTAAGCCACATGCA 58.846 47.619 0.00 0.00 44.83 3.96
43 44 2.153645 TGTGAACTAAGCCACATGCAG 58.846 47.619 0.00 0.00 44.83 4.41
44 45 2.224499 TGTGAACTAAGCCACATGCAGA 60.224 45.455 0.00 0.00 44.83 4.26
45 46 3.012518 GTGAACTAAGCCACATGCAGAT 58.987 45.455 0.00 0.00 44.83 2.90
46 47 3.441572 GTGAACTAAGCCACATGCAGATT 59.558 43.478 0.00 0.00 44.83 2.40
48 49 5.123820 GTGAACTAAGCCACATGCAGATTTA 59.876 40.000 0.00 0.00 44.83 1.40
49 50 5.709631 TGAACTAAGCCACATGCAGATTTAA 59.290 36.000 0.00 0.00 44.83 1.52
51 52 5.954335 ACTAAGCCACATGCAGATTTAAAC 58.046 37.500 0.00 0.00 44.83 2.01
52 53 4.870123 AAGCCACATGCAGATTTAAACA 57.130 36.364 0.00 0.00 44.83 2.83
53 54 4.178545 AGCCACATGCAGATTTAAACAC 57.821 40.909 0.00 0.00 44.83 3.32
55 56 3.611530 GCCACATGCAGATTTAAACACGT 60.612 43.478 0.00 0.00 40.77 4.49
57 58 4.981674 CCACATGCAGATTTAAACACGTTT 59.018 37.500 0.00 0.22 36.63 3.60
58 59 5.116983 CCACATGCAGATTTAAACACGTTTC 59.883 40.000 0.00 0.00 34.23 2.78
62 63 6.125327 TGCAGATTTAAACACGTTTCTGAA 57.875 33.333 15.24 5.01 34.23 3.02
63 64 6.198687 TGCAGATTTAAACACGTTTCTGAAG 58.801 36.000 15.24 0.00 34.23 3.02
64 65 6.037720 TGCAGATTTAAACACGTTTCTGAAGA 59.962 34.615 15.24 0.15 34.23 2.87
65 66 6.910433 GCAGATTTAAACACGTTTCTGAAGAA 59.090 34.615 15.24 0.00 34.23 2.52
66 67 7.591426 GCAGATTTAAACACGTTTCTGAAGAAT 59.409 33.333 15.24 1.14 33.54 2.40
67 68 9.107367 CAGATTTAAACACGTTTCTGAAGAATC 57.893 33.333 8.04 2.45 33.54 2.52
68 69 8.836413 AGATTTAAACACGTTTCTGAAGAATCA 58.164 29.630 0.00 0.00 33.54 2.57
69 70 9.445786 GATTTAAACACGTTTCTGAAGAATCAA 57.554 29.630 0.00 0.00 32.97 2.57
70 71 9.796120 ATTTAAACACGTTTCTGAAGAATCAAA 57.204 25.926 0.00 0.00 32.97 2.69
72 73 7.684062 AAACACGTTTCTGAAGAATCAAATG 57.316 32.000 0.00 0.00 34.49 2.32
74 75 6.201517 ACACGTTTCTGAAGAATCAAATGTG 58.798 36.000 12.03 12.03 43.06 3.21
75 76 6.183360 ACACGTTTCTGAAGAATCAAATGTGT 60.183 34.615 13.06 13.06 44.24 3.72
76 77 6.141211 CACGTTTCTGAAGAATCAAATGTGTG 59.859 38.462 7.23 1.18 37.93 3.82
77 78 6.038161 ACGTTTCTGAAGAATCAAATGTGTGA 59.962 34.615 0.00 0.00 34.49 3.58
78 79 6.912051 CGTTTCTGAAGAATCAAATGTGTGAA 59.088 34.615 0.00 0.00 34.49 3.18
79 80 7.592533 CGTTTCTGAAGAATCAAATGTGTGAAT 59.407 33.333 0.00 0.00 34.49 2.57
80 81 8.697067 GTTTCTGAAGAATCAAATGTGTGAATG 58.303 33.333 0.00 0.00 34.49 2.67
82 83 8.620116 TCTGAAGAATCAAATGTGTGAATGTA 57.380 30.769 0.00 0.00 34.49 2.29
83 84 8.506437 TCTGAAGAATCAAATGTGTGAATGTAC 58.494 33.333 0.00 0.00 34.49 2.90
84 85 8.164058 TGAAGAATCAAATGTGTGAATGTACA 57.836 30.769 0.00 0.00 30.99 2.90
85 86 8.628280 TGAAGAATCAAATGTGTGAATGTACAA 58.372 29.630 0.00 0.00 30.99 2.41
86 87 9.462174 GAAGAATCAAATGTGTGAATGTACAAA 57.538 29.630 0.00 0.00 31.36 2.83
87 88 8.801715 AGAATCAAATGTGTGAATGTACAAAC 57.198 30.769 0.00 0.00 31.36 2.93
88 89 8.412456 AGAATCAAATGTGTGAATGTACAAACA 58.588 29.630 0.00 2.29 41.37 2.83
91 92 8.179148 TCAAATGTGTGAATGTACAAACAAAC 57.821 30.769 14.90 14.90 40.66 2.93
92 93 8.031864 TCAAATGTGTGAATGTACAAACAAACT 58.968 29.630 19.48 2.60 40.66 2.66
93 94 7.754069 AATGTGTGAATGTACAAACAAACTG 57.246 32.000 19.48 0.00 40.66 3.16
94 95 5.098893 TGTGTGAATGTACAAACAAACTGC 58.901 37.500 19.48 7.13 39.58 4.40
95 96 5.105957 TGTGTGAATGTACAAACAAACTGCT 60.106 36.000 19.48 0.00 39.58 4.24
96 97 5.804979 GTGTGAATGTACAAACAAACTGCTT 59.195 36.000 14.64 0.00 39.58 3.91
97 98 6.310224 GTGTGAATGTACAAACAAACTGCTTT 59.690 34.615 14.64 0.00 39.58 3.51
100 101 7.222611 GTGAATGTACAAACAAACTGCTTTCAT 59.777 33.333 0.00 0.00 39.58 2.57
102 103 9.410556 GAATGTACAAACAAACTGCTTTCATAT 57.589 29.630 0.00 0.00 39.58 1.78
104 105 9.840427 ATGTACAAACAAACTGCTTTCATATAC 57.160 29.630 0.00 0.00 39.58 1.47
105 106 9.062524 TGTACAAACAAACTGCTTTCATATACT 57.937 29.630 0.00 0.00 30.91 2.12
106 107 9.893305 GTACAAACAAACTGCTTTCATATACTT 57.107 29.630 0.00 0.00 0.00 2.24
108 109 8.082242 ACAAACAAACTGCTTTCATATACTTCC 58.918 33.333 0.00 0.00 0.00 3.46
109 110 8.299570 CAAACAAACTGCTTTCATATACTTCCT 58.700 33.333 0.00 0.00 0.00 3.36
110 111 8.409358 AACAAACTGCTTTCATATACTTCCTT 57.591 30.769 0.00 0.00 0.00 3.36
111 112 7.820648 ACAAACTGCTTTCATATACTTCCTTG 58.179 34.615 0.00 0.00 0.00 3.61
112 113 7.094205 ACAAACTGCTTTCATATACTTCCTTGG 60.094 37.037 0.00 0.00 0.00 3.61
113 114 6.067217 ACTGCTTTCATATACTTCCTTGGT 57.933 37.500 0.00 0.00 0.00 3.67
114 115 6.116126 ACTGCTTTCATATACTTCCTTGGTC 58.884 40.000 0.00 0.00 0.00 4.02
115 116 5.437060 TGCTTTCATATACTTCCTTGGTCC 58.563 41.667 0.00 0.00 0.00 4.46
118 119 6.395780 TTTCATATACTTCCTTGGTCCCAA 57.604 37.500 0.00 0.00 0.00 4.12
119 120 6.395780 TTCATATACTTCCTTGGTCCCAAA 57.604 37.500 0.00 0.00 35.33 3.28
120 121 6.395780 TCATATACTTCCTTGGTCCCAAAA 57.604 37.500 0.00 0.00 35.33 2.44
126 127 4.832823 ACTTCCTTGGTCCCAAAATAAGTG 59.167 41.667 14.61 0.00 34.21 3.16
127 128 4.463050 TCCTTGGTCCCAAAATAAGTGT 57.537 40.909 0.00 0.00 35.33 3.55
128 129 4.403734 TCCTTGGTCCCAAAATAAGTGTC 58.596 43.478 0.00 0.00 35.33 3.67
129 130 4.105697 TCCTTGGTCCCAAAATAAGTGTCT 59.894 41.667 0.00 0.00 35.33 3.41
130 131 4.459337 CCTTGGTCCCAAAATAAGTGTCTC 59.541 45.833 0.00 0.00 35.33 3.36
131 132 4.715534 TGGTCCCAAAATAAGTGTCTCA 57.284 40.909 0.00 0.00 0.00 3.27
133 134 4.825085 TGGTCCCAAAATAAGTGTCTCAAC 59.175 41.667 0.00 0.00 0.00 3.18
134 135 5.070685 GGTCCCAAAATAAGTGTCTCAACT 58.929 41.667 0.00 0.00 0.00 3.16
135 136 5.535030 GGTCCCAAAATAAGTGTCTCAACTT 59.465 40.000 0.00 0.00 42.89 2.66
136 137 6.040504 GGTCCCAAAATAAGTGTCTCAACTTT 59.959 38.462 0.00 0.00 40.77 2.66
137 138 6.918022 GTCCCAAAATAAGTGTCTCAACTTTG 59.082 38.462 0.00 0.00 40.77 2.77
138 139 6.605594 TCCCAAAATAAGTGTCTCAACTTTGT 59.394 34.615 0.00 0.00 40.77 2.83
139 140 7.776030 TCCCAAAATAAGTGTCTCAACTTTGTA 59.224 33.333 0.00 0.00 40.77 2.41
140 141 8.076178 CCCAAAATAAGTGTCTCAACTTTGTAG 58.924 37.037 0.00 0.00 40.77 2.74
141 142 8.621286 CCAAAATAAGTGTCTCAACTTTGTAGT 58.379 33.333 0.00 0.00 40.77 2.73
148 149 9.880157 AAGTGTCTCAACTTTGTAGTAACTTAA 57.120 29.630 0.00 0.00 37.05 1.85
187 188 9.581099 AGTACAAAGTTGAAACACTTATTTTGG 57.419 29.630 0.00 0.00 35.87 3.28
188 189 7.841915 ACAAAGTTGAAACACTTATTTTGGG 57.158 32.000 0.00 0.00 35.87 4.12
189 190 7.616313 ACAAAGTTGAAACACTTATTTTGGGA 58.384 30.769 0.00 0.00 35.87 4.37
190 191 7.547722 ACAAAGTTGAAACACTTATTTTGGGAC 59.452 33.333 0.00 0.00 35.87 4.46
191 192 5.827666 AGTTGAAACACTTATTTTGGGACG 58.172 37.500 0.00 0.00 0.00 4.79
195 196 3.067684 ACACTTATTTTGGGACGGAGG 57.932 47.619 0.00 0.00 0.00 4.30
196 197 2.290705 ACACTTATTTTGGGACGGAGGG 60.291 50.000 0.00 0.00 0.00 4.30
197 198 2.026636 CACTTATTTTGGGACGGAGGGA 60.027 50.000 0.00 0.00 0.00 4.20
198 199 2.238898 ACTTATTTTGGGACGGAGGGAG 59.761 50.000 0.00 0.00 0.00 4.30
199 200 1.961133 TATTTTGGGACGGAGGGAGT 58.039 50.000 0.00 0.00 0.00 3.85
200 201 1.961133 ATTTTGGGACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
202 203 1.961133 TTTGGGACGGAGGGAGTATT 58.039 50.000 0.00 0.00 0.00 1.89
203 204 1.961133 TTGGGACGGAGGGAGTATTT 58.039 50.000 0.00 0.00 0.00 1.40
204 205 1.961133 TGGGACGGAGGGAGTATTTT 58.039 50.000 0.00 0.00 0.00 1.82
205 206 1.557832 TGGGACGGAGGGAGTATTTTG 59.442 52.381 0.00 0.00 0.00 2.44
206 207 1.835531 GGGACGGAGGGAGTATTTTGA 59.164 52.381 0.00 0.00 0.00 2.69
207 208 2.158943 GGGACGGAGGGAGTATTTTGAG 60.159 54.545 0.00 0.00 0.00 3.02
208 209 2.764572 GGACGGAGGGAGTATTTTGAGA 59.235 50.000 0.00 0.00 0.00 3.27
209 210 3.181474 GGACGGAGGGAGTATTTTGAGAG 60.181 52.174 0.00 0.00 0.00 3.20
211 212 4.290942 ACGGAGGGAGTATTTTGAGAGAT 58.709 43.478 0.00 0.00 0.00 2.75
212 213 4.717280 ACGGAGGGAGTATTTTGAGAGATT 59.283 41.667 0.00 0.00 0.00 2.40
213 214 5.897824 ACGGAGGGAGTATTTTGAGAGATTA 59.102 40.000 0.00 0.00 0.00 1.75
214 215 6.041069 ACGGAGGGAGTATTTTGAGAGATTAG 59.959 42.308 0.00 0.00 0.00 1.73
215 216 6.041069 CGGAGGGAGTATTTTGAGAGATTAGT 59.959 42.308 0.00 0.00 0.00 2.24
216 217 7.230913 CGGAGGGAGTATTTTGAGAGATTAGTA 59.769 40.741 0.00 0.00 0.00 1.82
217 218 8.925338 GGAGGGAGTATTTTGAGAGATTAGTAA 58.075 37.037 0.00 0.00 0.00 2.24
219 220 8.706521 AGGGAGTATTTTGAGAGATTAGTAACC 58.293 37.037 0.00 0.00 0.00 2.85
220 221 7.652507 GGGAGTATTTTGAGAGATTAGTAACCG 59.347 40.741 0.00 0.00 0.00 4.44
221 222 8.411683 GGAGTATTTTGAGAGATTAGTAACCGA 58.588 37.037 0.00 0.00 0.00 4.69
222 223 9.453325 GAGTATTTTGAGAGATTAGTAACCGAG 57.547 37.037 0.00 0.00 0.00 4.63
223 224 8.414778 AGTATTTTGAGAGATTAGTAACCGAGG 58.585 37.037 0.00 0.00 0.00 4.63
224 225 5.593679 TTTGAGAGATTAGTAACCGAGGG 57.406 43.478 0.00 0.00 0.00 4.30
225 226 4.515028 TGAGAGATTAGTAACCGAGGGA 57.485 45.455 0.00 0.00 0.00 4.20
226 227 4.863548 TGAGAGATTAGTAACCGAGGGAA 58.136 43.478 0.00 0.00 0.00 3.97
227 228 5.455872 TGAGAGATTAGTAACCGAGGGAAT 58.544 41.667 0.00 0.00 0.00 3.01
228 229 5.897824 TGAGAGATTAGTAACCGAGGGAATT 59.102 40.000 0.00 0.00 0.00 2.17
230 231 4.704965 AGATTAGTAACCGAGGGAATTGC 58.295 43.478 0.00 0.00 0.00 3.56
233 234 1.002773 AGTAACCGAGGGAATTGCGTT 59.997 47.619 0.00 0.00 0.00 4.84
234 235 1.808343 GTAACCGAGGGAATTGCGTTT 59.192 47.619 0.00 0.00 0.00 3.60
235 236 0.879090 AACCGAGGGAATTGCGTTTC 59.121 50.000 0.00 0.00 0.00 2.78
236 237 0.036306 ACCGAGGGAATTGCGTTTCT 59.964 50.000 0.00 0.00 0.00 2.52
238 239 1.438651 CGAGGGAATTGCGTTTCTCA 58.561 50.000 0.00 0.00 0.00 3.27
240 241 2.412847 CGAGGGAATTGCGTTTCTCAAC 60.413 50.000 0.00 0.00 0.00 3.18
241 242 2.552315 GAGGGAATTGCGTTTCTCAACA 59.448 45.455 0.00 0.00 32.54 3.33
242 243 2.554032 AGGGAATTGCGTTTCTCAACAG 59.446 45.455 1.66 0.00 32.54 3.16
243 244 2.293399 GGGAATTGCGTTTCTCAACAGT 59.707 45.455 0.00 0.00 32.54 3.55
244 245 3.300009 GGAATTGCGTTTCTCAACAGTG 58.700 45.455 0.00 0.00 32.54 3.66
247 248 1.295792 TGCGTTTCTCAACAGTGACC 58.704 50.000 0.00 0.00 32.54 4.02
248 249 1.295792 GCGTTTCTCAACAGTGACCA 58.704 50.000 0.00 0.00 32.54 4.02
249 250 1.668751 GCGTTTCTCAACAGTGACCAA 59.331 47.619 0.00 0.00 32.54 3.67
250 251 2.286418 GCGTTTCTCAACAGTGACCAAG 60.286 50.000 0.00 0.00 32.54 3.61
251 252 3.194861 CGTTTCTCAACAGTGACCAAGA 58.805 45.455 0.00 0.00 32.54 3.02
252 253 3.809832 CGTTTCTCAACAGTGACCAAGAT 59.190 43.478 0.00 0.00 32.54 2.40
253 254 4.988540 CGTTTCTCAACAGTGACCAAGATA 59.011 41.667 0.00 0.00 32.54 1.98
254 255 5.465390 CGTTTCTCAACAGTGACCAAGATAA 59.535 40.000 0.00 0.00 32.54 1.75
255 256 6.018262 CGTTTCTCAACAGTGACCAAGATAAA 60.018 38.462 0.00 0.00 32.54 1.40
256 257 7.355778 GTTTCTCAACAGTGACCAAGATAAAG 58.644 38.462 0.00 0.00 32.54 1.85
257 258 5.551233 TCTCAACAGTGACCAAGATAAAGG 58.449 41.667 0.00 0.00 0.00 3.11
259 260 3.073274 ACAGTGACCAAGATAAAGGGC 57.927 47.619 0.00 0.00 0.00 5.19
260 261 2.644798 ACAGTGACCAAGATAAAGGGCT 59.355 45.455 0.00 0.00 32.68 5.19
263 264 3.010420 GTGACCAAGATAAAGGGCTCAC 58.990 50.000 0.00 0.00 32.68 3.51
266 267 4.263905 TGACCAAGATAAAGGGCTCACATT 60.264 41.667 0.00 0.00 32.68 2.71
268 269 4.019174 CCAAGATAAAGGGCTCACATTGT 58.981 43.478 0.00 0.00 0.00 2.71
269 270 4.463891 CCAAGATAAAGGGCTCACATTGTT 59.536 41.667 0.00 0.00 0.00 2.83
270 271 5.047092 CCAAGATAAAGGGCTCACATTGTTT 60.047 40.000 0.00 0.00 0.00 2.83
271 272 5.904362 AGATAAAGGGCTCACATTGTTTC 57.096 39.130 0.00 0.00 0.00 2.78
272 273 5.324409 AGATAAAGGGCTCACATTGTTTCA 58.676 37.500 0.00 0.00 0.00 2.69
273 274 5.774690 AGATAAAGGGCTCACATTGTTTCAA 59.225 36.000 0.00 0.00 0.00 2.69
274 275 4.961438 AAAGGGCTCACATTGTTTCAAT 57.039 36.364 0.00 0.00 0.00 2.57
275 276 3.947910 AGGGCTCACATTGTTTCAATG 57.052 42.857 17.35 17.35 0.00 2.82
276 277 2.028748 AGGGCTCACATTGTTTCAATGC 60.029 45.455 18.43 7.78 0.00 3.56
277 278 2.340337 GGCTCACATTGTTTCAATGCC 58.660 47.619 18.43 12.06 0.00 4.40
278 279 2.288948 GGCTCACATTGTTTCAATGCCA 60.289 45.455 18.43 7.68 37.91 4.92
280 281 3.305539 GCTCACATTGTTTCAATGCCAGA 60.306 43.478 18.43 13.80 0.00 3.86
281 282 4.482386 CTCACATTGTTTCAATGCCAGAG 58.518 43.478 18.43 17.63 0.00 3.35
283 284 4.583907 TCACATTGTTTCAATGCCAGAGAA 59.416 37.500 18.43 0.00 0.00 2.87
284 285 5.244402 TCACATTGTTTCAATGCCAGAGAAT 59.756 36.000 18.43 0.00 0.00 2.40
285 286 5.929992 CACATTGTTTCAATGCCAGAGAATT 59.070 36.000 18.43 0.00 0.00 2.17
286 287 5.929992 ACATTGTTTCAATGCCAGAGAATTG 59.070 36.000 18.43 0.00 35.52 2.32
287 288 3.916761 TGTTTCAATGCCAGAGAATTGC 58.083 40.909 0.00 0.00 34.44 3.56
289 290 4.202233 TGTTTCAATGCCAGAGAATTGCAA 60.202 37.500 0.00 0.00 38.69 4.08
290 291 4.811969 TTCAATGCCAGAGAATTGCAAT 57.188 36.364 5.99 5.99 38.69 3.56
293 294 4.112634 CAATGCCAGAGAATTGCAATCAG 58.887 43.478 13.38 0.00 38.69 2.90
294 295 2.097036 TGCCAGAGAATTGCAATCAGG 58.903 47.619 13.38 8.92 30.85 3.86
295 296 2.291089 TGCCAGAGAATTGCAATCAGGA 60.291 45.455 13.38 0.00 30.85 3.86
296 297 2.098770 GCCAGAGAATTGCAATCAGGAC 59.901 50.000 13.38 3.48 0.00 3.85
297 298 2.353889 CCAGAGAATTGCAATCAGGACG 59.646 50.000 13.38 0.30 0.00 4.79
298 299 2.353889 CAGAGAATTGCAATCAGGACGG 59.646 50.000 13.38 0.82 0.00 4.79
299 300 2.026822 AGAGAATTGCAATCAGGACGGT 60.027 45.455 13.38 0.00 0.00 4.83
300 301 3.197766 AGAGAATTGCAATCAGGACGGTA 59.802 43.478 13.38 0.00 0.00 4.02
301 302 3.535561 AGAATTGCAATCAGGACGGTAG 58.464 45.455 13.38 0.00 0.00 3.18
302 303 1.668419 ATTGCAATCAGGACGGTAGC 58.332 50.000 5.99 0.00 0.00 3.58
303 304 0.613260 TTGCAATCAGGACGGTAGCT 59.387 50.000 0.00 0.00 0.00 3.32
305 306 1.291132 GCAATCAGGACGGTAGCTTC 58.709 55.000 0.00 0.00 0.00 3.86
306 307 1.941325 CAATCAGGACGGTAGCTTCC 58.059 55.000 9.35 9.35 0.00 3.46
315 316 4.587189 GTAGCTTCCCGCCGCGAT 62.587 66.667 15.93 0.00 40.39 4.58
316 317 3.845259 TAGCTTCCCGCCGCGATT 61.845 61.111 15.93 0.00 40.39 3.34
317 318 3.379865 TAGCTTCCCGCCGCGATTT 62.380 57.895 15.93 0.00 40.39 2.17
318 319 2.862674 TAGCTTCCCGCCGCGATTTT 62.863 55.000 15.93 0.00 40.39 1.82
319 320 2.874751 CTTCCCGCCGCGATTTTT 59.125 55.556 15.93 0.00 0.00 1.94
338 339 4.759516 TTTTTCTTGGATGTACGGAAGC 57.240 40.909 0.00 0.00 0.00 3.86
339 340 2.396590 TTCTTGGATGTACGGAAGCC 57.603 50.000 0.00 0.00 0.00 4.35
340 341 1.271856 TCTTGGATGTACGGAAGCCA 58.728 50.000 0.00 0.00 0.00 4.75
341 342 1.626321 TCTTGGATGTACGGAAGCCAA 59.374 47.619 1.93 1.93 37.13 4.52
342 343 2.238646 TCTTGGATGTACGGAAGCCAAT 59.761 45.455 2.26 0.00 37.91 3.16
343 344 2.325583 TGGATGTACGGAAGCCAATC 57.674 50.000 0.00 0.00 0.00 2.67
344 345 1.134220 TGGATGTACGGAAGCCAATCC 60.134 52.381 0.00 0.00 36.05 3.01
346 347 2.639065 GATGTACGGAAGCCAATCCAA 58.361 47.619 2.18 0.00 39.61 3.53
347 348 2.570415 TGTACGGAAGCCAATCCAAA 57.430 45.000 2.18 0.00 39.61 3.28
348 349 3.080300 TGTACGGAAGCCAATCCAAAT 57.920 42.857 2.18 0.00 39.61 2.32
349 350 2.752354 TGTACGGAAGCCAATCCAAATG 59.248 45.455 2.18 0.00 39.61 2.32
350 351 1.923356 ACGGAAGCCAATCCAAATGT 58.077 45.000 2.18 0.00 39.61 2.71
352 353 1.818060 CGGAAGCCAATCCAAATGTCA 59.182 47.619 2.18 0.00 39.61 3.58
353 354 2.230992 CGGAAGCCAATCCAAATGTCAA 59.769 45.455 2.18 0.00 39.61 3.18
354 355 3.588955 GGAAGCCAATCCAAATGTCAAC 58.411 45.455 0.00 0.00 39.42 3.18
355 356 3.259123 GGAAGCCAATCCAAATGTCAACT 59.741 43.478 0.00 0.00 39.42 3.16
357 358 4.961438 AGCCAATCCAAATGTCAACTTT 57.039 36.364 0.00 0.00 0.00 2.66
358 359 4.634199 AGCCAATCCAAATGTCAACTTTG 58.366 39.130 0.00 0.00 34.17 2.77
359 360 4.344679 AGCCAATCCAAATGTCAACTTTGA 59.655 37.500 1.24 0.00 35.99 2.69
376 377 9.424319 TCAACTTTGACAAGTATCTAACATCTC 57.576 33.333 0.00 0.00 42.89 2.75
377 378 8.660373 CAACTTTGACAAGTATCTAACATCTCC 58.340 37.037 0.00 0.00 42.89 3.71
380 381 9.442047 CTTTGACAAGTATCTAACATCTCCTTT 57.558 33.333 0.00 0.00 0.00 3.11
381 382 8.777865 TTGACAAGTATCTAACATCTCCTTTG 57.222 34.615 0.00 0.00 0.00 2.77
383 384 8.593679 TGACAAGTATCTAACATCTCCTTTGAA 58.406 33.333 0.00 0.00 0.00 2.69
384 385 9.606631 GACAAGTATCTAACATCTCCTTTGAAT 57.393 33.333 0.00 0.00 0.00 2.57
385 386 9.606631 ACAAGTATCTAACATCTCCTTTGAATC 57.393 33.333 0.00 0.00 0.00 2.52
386 387 9.829507 CAAGTATCTAACATCTCCTTTGAATCT 57.170 33.333 0.00 0.00 0.00 2.40
388 389 9.206690 AGTATCTAACATCTCCTTTGAATCTGA 57.793 33.333 0.00 0.00 0.00 3.27
389 390 9.823647 GTATCTAACATCTCCTTTGAATCTGAA 57.176 33.333 0.00 0.00 0.00 3.02
453 454 9.725019 AAACAAATGTGTATCTAATGTCAGAGA 57.275 29.630 0.00 0.00 36.80 3.10
454 455 9.725019 AACAAATGTGTATCTAATGTCAGAGAA 57.275 29.630 0.00 0.00 36.80 2.87
455 456 9.896645 ACAAATGTGTATCTAATGTCAGAGAAT 57.103 29.630 0.00 0.00 35.72 2.40
485 486 9.985730 TTTTGAATGAAAGAATATTTGACAGCT 57.014 25.926 0.00 0.00 0.00 4.24
486 487 8.975410 TTGAATGAAAGAATATTTGACAGCTG 57.025 30.769 13.48 13.48 0.00 4.24
487 488 8.114331 TGAATGAAAGAATATTTGACAGCTGT 57.886 30.769 21.88 21.88 0.00 4.40
488 489 8.239314 TGAATGAAAGAATATTTGACAGCTGTC 58.761 33.333 35.04 35.04 44.97 3.51
490 491 6.003326 TGAAAGAATATTTGACAGCTGTCCA 58.997 36.000 37.23 27.65 44.15 4.02
492 493 7.177216 TGAAAGAATATTTGACAGCTGTCCAAT 59.823 33.333 35.04 35.04 44.15 3.16
493 494 8.579850 AAAGAATATTTGACAGCTGTCCAATA 57.420 30.769 36.33 36.33 42.77 1.90
494 495 7.559590 AGAATATTTGACAGCTGTCCAATAC 57.440 36.000 36.73 28.91 41.99 1.89
495 496 6.543831 AGAATATTTGACAGCTGTCCAATACC 59.456 38.462 36.73 31.29 41.99 2.73
496 497 3.788227 TTTGACAGCTGTCCAATACCT 57.212 42.857 37.23 5.86 44.15 3.08
497 498 2.768253 TGACAGCTGTCCAATACCTG 57.232 50.000 37.23 1.84 44.15 4.00
498 499 1.339055 TGACAGCTGTCCAATACCTGC 60.339 52.381 37.23 15.00 44.15 4.85
499 500 0.692476 ACAGCTGTCCAATACCTGCA 59.308 50.000 15.25 0.00 0.00 4.41
500 501 1.283029 ACAGCTGTCCAATACCTGCAT 59.717 47.619 15.25 0.00 0.00 3.96
501 502 1.674441 CAGCTGTCCAATACCTGCATG 59.326 52.381 5.25 0.00 0.00 4.06
504 505 2.954318 GCTGTCCAATACCTGCATGAAT 59.046 45.455 0.00 0.00 0.00 2.57
507 508 4.201657 TGTCCAATACCTGCATGAATCTG 58.798 43.478 0.00 0.00 0.00 2.90
511 512 6.712095 GTCCAATACCTGCATGAATCTGATAA 59.288 38.462 0.00 0.00 0.00 1.75
512 513 7.229306 GTCCAATACCTGCATGAATCTGATAAA 59.771 37.037 0.00 0.00 0.00 1.40
513 514 7.779326 TCCAATACCTGCATGAATCTGATAAAA 59.221 33.333 0.00 0.00 0.00 1.52
514 515 8.080417 CCAATACCTGCATGAATCTGATAAAAG 58.920 37.037 0.00 0.00 0.00 2.27
516 517 8.757982 ATACCTGCATGAATCTGATAAAAGTT 57.242 30.769 0.00 0.00 0.00 2.66
517 518 7.093322 ACCTGCATGAATCTGATAAAAGTTC 57.907 36.000 0.00 0.00 0.00 3.01
518 519 6.660521 ACCTGCATGAATCTGATAAAAGTTCA 59.339 34.615 0.00 0.00 33.82 3.18
519 520 6.971184 CCTGCATGAATCTGATAAAAGTTCAC 59.029 38.462 0.00 0.00 32.30 3.18
520 521 6.855836 TGCATGAATCTGATAAAAGTTCACC 58.144 36.000 0.00 0.00 32.30 4.02
521 522 6.433716 TGCATGAATCTGATAAAAGTTCACCA 59.566 34.615 0.00 0.00 32.30 4.17
523 524 8.623903 GCATGAATCTGATAAAAGTTCACCATA 58.376 33.333 0.00 0.00 32.30 2.74
524 525 9.941664 CATGAATCTGATAAAAGTTCACCATAC 57.058 33.333 0.00 0.00 32.30 2.39
525 526 8.506168 TGAATCTGATAAAAGTTCACCATACC 57.494 34.615 0.00 0.00 0.00 2.73
526 527 7.556275 TGAATCTGATAAAAGTTCACCATACCC 59.444 37.037 0.00 0.00 0.00 3.69
527 528 6.381498 TCTGATAAAAGTTCACCATACCCA 57.619 37.500 0.00 0.00 0.00 4.51
530 531 7.726291 TCTGATAAAAGTTCACCATACCCAAAA 59.274 33.333 0.00 0.00 0.00 2.44
556 557 8.834749 AAAAACCTAGACAGTAAGACATCTTC 57.165 34.615 0.00 0.00 37.40 2.87
557 558 7.540474 AAACCTAGACAGTAAGACATCTTCA 57.460 36.000 0.00 0.00 37.40 3.02
558 559 7.540474 AACCTAGACAGTAAGACATCTTCAA 57.460 36.000 0.00 0.00 37.40 2.69
563 564 7.954788 AGACAGTAAGACATCTTCAAAACTC 57.045 36.000 0.00 0.00 37.40 3.01
565 566 7.655328 AGACAGTAAGACATCTTCAAAACTCAG 59.345 37.037 0.00 0.00 37.40 3.35
567 568 8.153550 ACAGTAAGACATCTTCAAAACTCAGAT 58.846 33.333 0.00 0.00 37.40 2.90
568 569 8.997323 CAGTAAGACATCTTCAAAACTCAGATT 58.003 33.333 0.00 0.00 37.40 2.40
569 570 9.566432 AGTAAGACATCTTCAAAACTCAGATTT 57.434 29.630 0.00 0.00 37.40 2.17
573 574 8.566260 AGACATCTTCAAAACTCAGATTTTCTG 58.434 33.333 0.00 0.00 45.59 3.02
575 576 6.698008 TCTTCAAAACTCAGATTTTCTGCA 57.302 33.333 0.00 0.00 43.95 4.41
576 577 7.281040 TCTTCAAAACTCAGATTTTCTGCAT 57.719 32.000 0.00 0.00 43.95 3.96
577 578 7.719483 TCTTCAAAACTCAGATTTTCTGCATT 58.281 30.769 0.00 0.00 43.95 3.56
579 580 8.721019 TTCAAAACTCAGATTTTCTGCATTTT 57.279 26.923 10.34 10.34 43.95 1.82
581 582 9.814899 TCAAAACTCAGATTTTCTGCATTTTTA 57.185 25.926 12.18 6.13 43.95 1.52
585 586 8.181904 ACTCAGATTTTCTGCATTTTTAGGAA 57.818 30.769 0.00 0.00 43.95 3.36
586 587 8.810041 ACTCAGATTTTCTGCATTTTTAGGAAT 58.190 29.630 0.00 0.00 43.95 3.01
588 589 8.587608 TCAGATTTTCTGCATTTTTAGGAATGT 58.412 29.630 0.00 0.00 43.95 2.71
589 590 9.211485 CAGATTTTCTGCATTTTTAGGAATGTT 57.789 29.630 0.00 0.00 37.72 2.71
593 594 9.691362 TTTTCTGCATTTTTAGGAATGTTACTC 57.309 29.630 0.00 0.00 38.86 2.59
594 595 7.994425 TCTGCATTTTTAGGAATGTTACTCA 57.006 32.000 0.00 0.00 38.86 3.41
595 596 7.816640 TCTGCATTTTTAGGAATGTTACTCAC 58.183 34.615 0.00 0.00 38.86 3.51
596 597 7.446931 TCTGCATTTTTAGGAATGTTACTCACA 59.553 33.333 0.00 0.00 38.86 3.58
597 598 7.592938 TGCATTTTTAGGAATGTTACTCACAG 58.407 34.615 0.00 0.00 39.40 3.66
599 600 8.726988 GCATTTTTAGGAATGTTACTCACAGTA 58.273 33.333 0.00 0.00 39.40 2.74
612 613 3.979789 CAGTATGTTGGTGCCGCA 58.020 55.556 0.00 0.00 0.00 5.69
613 614 2.481212 CAGTATGTTGGTGCCGCAT 58.519 52.632 0.00 4.16 0.00 4.73
615 616 0.322456 AGTATGTTGGTGCCGCATGT 60.322 50.000 0.00 0.00 0.00 3.21
616 617 0.179166 GTATGTTGGTGCCGCATGTG 60.179 55.000 0.00 0.00 0.00 3.21
618 619 1.588824 ATGTTGGTGCCGCATGTGAG 61.589 55.000 8.11 0.00 0.00 3.51
619 620 2.112928 TTGGTGCCGCATGTGAGT 59.887 55.556 8.11 0.00 0.00 3.41
620 621 1.528076 TTGGTGCCGCATGTGAGTT 60.528 52.632 8.11 0.00 0.00 3.01
622 623 0.953471 TGGTGCCGCATGTGAGTTAC 60.953 55.000 8.11 1.06 0.00 2.50
623 624 1.644786 GGTGCCGCATGTGAGTTACC 61.645 60.000 8.11 6.63 0.00 2.85
626 627 0.378257 GCCGCATGTGAGTTACCATG 59.622 55.000 8.11 0.00 0.00 3.66
627 628 2.011548 GCCGCATGTGAGTTACCATGA 61.012 52.381 8.11 0.00 0.00 3.07
628 629 2.564771 CCGCATGTGAGTTACCATGAT 58.435 47.619 8.11 0.00 0.00 2.45
629 630 2.945008 CCGCATGTGAGTTACCATGATT 59.055 45.455 8.11 0.00 0.00 2.57
630 631 3.378112 CCGCATGTGAGTTACCATGATTT 59.622 43.478 8.11 0.00 0.00 2.17
631 632 4.142403 CCGCATGTGAGTTACCATGATTTT 60.142 41.667 8.11 0.00 0.00 1.82
632 633 5.030295 CGCATGTGAGTTACCATGATTTTC 58.970 41.667 0.00 0.00 0.00 2.29
633 634 5.391843 CGCATGTGAGTTACCATGATTTTCA 60.392 40.000 0.00 0.00 0.00 2.69
634 635 6.567050 GCATGTGAGTTACCATGATTTTCAT 58.433 36.000 0.00 0.00 37.65 2.57
636 637 7.546667 GCATGTGAGTTACCATGATTTTCATTT 59.453 33.333 0.00 0.00 34.28 2.32
637 638 9.426837 CATGTGAGTTACCATGATTTTCATTTT 57.573 29.630 0.00 0.00 34.28 1.82
638 639 9.643693 ATGTGAGTTACCATGATTTTCATTTTC 57.356 29.630 0.00 0.00 34.28 2.29
639 640 8.637099 TGTGAGTTACCATGATTTTCATTTTCA 58.363 29.630 0.00 0.00 34.28 2.69
640 641 9.643693 GTGAGTTACCATGATTTTCATTTTCAT 57.356 29.630 0.00 0.00 34.28 2.57
694 695 6.718454 GCAATACAAATGCAACATTTACCA 57.282 33.333 5.30 0.00 43.29 3.25
695 696 7.306205 GCAATACAAATGCAACATTTACCAT 57.694 32.000 5.30 0.00 43.29 3.55
697 698 7.064371 GCAATACAAATGCAACATTTACCATCA 59.936 33.333 5.30 0.00 43.29 3.07
699 700 5.851720 ACAAATGCAACATTTACCATCACA 58.148 33.333 5.30 0.00 0.00 3.58
700 701 5.695816 ACAAATGCAACATTTACCATCACAC 59.304 36.000 5.30 0.00 0.00 3.82
701 702 5.465532 AATGCAACATTTACCATCACACA 57.534 34.783 0.00 0.00 0.00 3.72
702 703 4.235939 TGCAACATTTACCATCACACAC 57.764 40.909 0.00 0.00 0.00 3.82
704 705 3.233578 CAACATTTACCATCACACACGC 58.766 45.455 0.00 0.00 0.00 5.34
705 706 1.810151 ACATTTACCATCACACACGCC 59.190 47.619 0.00 0.00 0.00 5.68
706 707 1.132262 CATTTACCATCACACACGCCC 59.868 52.381 0.00 0.00 0.00 6.13
707 708 0.398696 TTTACCATCACACACGCCCT 59.601 50.000 0.00 0.00 0.00 5.19
708 709 0.398696 TTACCATCACACACGCCCTT 59.601 50.000 0.00 0.00 0.00 3.95
709 710 0.036765 TACCATCACACACGCCCTTC 60.037 55.000 0.00 0.00 0.00 3.46
710 711 1.003355 CCATCACACACGCCCTTCT 60.003 57.895 0.00 0.00 0.00 2.85
711 712 0.249120 CCATCACACACGCCCTTCTA 59.751 55.000 0.00 0.00 0.00 2.10
713 714 2.632377 CATCACACACGCCCTTCTAAT 58.368 47.619 0.00 0.00 0.00 1.73
714 715 2.380084 TCACACACGCCCTTCTAATC 57.620 50.000 0.00 0.00 0.00 1.75
715 716 1.066430 TCACACACGCCCTTCTAATCC 60.066 52.381 0.00 0.00 0.00 3.01
716 717 1.066143 CACACACGCCCTTCTAATCCT 60.066 52.381 0.00 0.00 0.00 3.24
717 718 2.167693 CACACACGCCCTTCTAATCCTA 59.832 50.000 0.00 0.00 0.00 2.94
718 719 2.431057 ACACACGCCCTTCTAATCCTAG 59.569 50.000 0.00 0.00 0.00 3.02
719 720 2.693591 CACACGCCCTTCTAATCCTAGA 59.306 50.000 0.00 0.00 32.02 2.43
720 721 3.132289 CACACGCCCTTCTAATCCTAGAA 59.868 47.826 0.00 0.00 41.03 2.10
723 724 3.385111 ACGCCCTTCTAATCCTAGAACAG 59.615 47.826 0.00 0.00 38.89 3.16
725 726 4.141914 CGCCCTTCTAATCCTAGAACAGTT 60.142 45.833 0.00 0.00 38.89 3.16
727 728 5.818336 GCCCTTCTAATCCTAGAACAGTTTC 59.182 44.000 0.00 0.00 38.89 2.78
728 729 6.350103 CCCTTCTAATCCTAGAACAGTTTCC 58.650 44.000 0.00 0.00 38.89 3.13
729 730 6.070194 CCCTTCTAATCCTAGAACAGTTTCCA 60.070 42.308 0.00 0.00 38.89 3.53
730 731 7.394816 CCTTCTAATCCTAGAACAGTTTCCAA 58.605 38.462 0.00 0.00 38.89 3.53
731 732 7.550906 CCTTCTAATCCTAGAACAGTTTCCAAG 59.449 40.741 0.00 0.00 38.89 3.61
732 733 6.947464 TCTAATCCTAGAACAGTTTCCAAGG 58.053 40.000 0.00 0.00 37.00 3.61
733 734 5.584551 AATCCTAGAACAGTTTCCAAGGT 57.415 39.130 0.00 0.00 36.99 3.50
734 735 4.618920 TCCTAGAACAGTTTCCAAGGTC 57.381 45.455 0.00 0.00 36.99 3.85
735 736 3.971305 TCCTAGAACAGTTTCCAAGGTCA 59.029 43.478 0.00 0.00 36.99 4.02
736 737 4.410883 TCCTAGAACAGTTTCCAAGGTCAA 59.589 41.667 0.00 0.00 36.99 3.18
737 738 5.104277 TCCTAGAACAGTTTCCAAGGTCAAA 60.104 40.000 0.00 0.00 36.99 2.69
738 739 4.983671 AGAACAGTTTCCAAGGTCAAAC 57.016 40.909 0.00 0.00 33.42 2.93
763 764 0.389166 GAGGTCGTTGAGTCCAGCAG 60.389 60.000 0.00 0.00 0.00 4.24
882 885 5.352284 AGTCAATGGTTTAGTCATCGCTAG 58.648 41.667 0.00 0.00 0.00 3.42
928 931 2.761208 CACTGTAGGAGTTGGTAGAGGG 59.239 54.545 0.00 0.00 29.75 4.30
931 934 4.264895 ACTGTAGGAGTTGGTAGAGGGATT 60.265 45.833 0.00 0.00 0.00 3.01
936 939 3.519913 GGAGTTGGTAGAGGGATTCAGTT 59.480 47.826 0.00 0.00 0.00 3.16
1205 3004 0.109913 TCAGGGATGATGATGCAGCC 59.890 55.000 0.00 0.00 43.45 4.85
1218 3017 1.181098 TGCAGCCCAAGAAGCTTTCC 61.181 55.000 0.00 0.00 38.95 3.13
1233 3032 1.546589 TTTCCGAGGCCATGTACCGT 61.547 55.000 5.01 0.00 0.00 4.83
1283 3082 1.202651 CCAAACTCTCCAAGACGGTGT 60.203 52.381 0.00 0.00 35.57 4.16
1333 3138 6.049149 TCATCTACCAGCTGCTTGTATTTAC 58.951 40.000 13.23 0.00 0.00 2.01
1835 3681 7.560262 TCATTAGTAGGCTTCAAAGACTAGCTA 59.440 37.037 5.56 7.83 46.88 3.32
1849 3695 5.198965 AGACTAGCTAGATTTGGAACGGTA 58.801 41.667 27.45 0.00 0.00 4.02
2035 3881 0.950836 TGTTTGCGGATGTGTTGAGG 59.049 50.000 0.00 0.00 0.00 3.86
2072 3918 2.092524 CAGTTTTGGCGTTGCATATTGC 59.907 45.455 0.00 0.00 45.29 3.56
2105 3951 7.324135 GGCTAAGATACGTTAGAAGAAATCTCG 59.676 40.741 0.00 0.00 39.71 4.04
2137 3986 0.248743 CGCACCCAAGCATGCTTATG 60.249 55.000 31.48 27.06 39.79 1.90
2211 4060 6.260936 AGCATGACACCTTATACTGTTTATGC 59.739 38.462 0.00 0.00 39.30 3.14
2237 4086 6.778821 TCAATGAAGAAGGAATCACCAAGTA 58.221 36.000 0.00 0.00 42.04 2.24
2270 4119 5.279256 GGGCAACTTCTATCAGATCCTAGTC 60.279 48.000 0.00 0.00 0.00 2.59
2278 4127 6.703319 TCTATCAGATCCTAGTCTTAGACCG 58.297 44.000 8.96 0.61 32.18 4.79
2364 4213 3.769739 TGTTACAAGTCATGCTCAGGT 57.230 42.857 0.00 0.00 0.00 4.00
2451 4301 7.160547 TCCAAACTCGTGTAATGTGACTATA 57.839 36.000 0.00 0.00 0.00 1.31
2492 4343 4.792704 GCATGACAAACGGATGTGTTCTTT 60.793 41.667 0.00 0.00 32.57 2.52
2519 4370 3.312890 TGTGGGGAAACAAATGGATGTT 58.687 40.909 0.00 0.00 45.12 2.71
2608 4459 1.338973 TGTCCGGATATACTTGTCGCC 59.661 52.381 7.81 0.00 0.00 5.54
2610 4461 0.388134 CCGGATATACTTGTCGCCCG 60.388 60.000 0.00 0.00 35.68 6.13
2650 4501 9.765795 AGATGTATTTTAGTTGTAGCTACATCC 57.234 33.333 26.54 19.18 42.17 3.51
2663 4514 2.540515 CTACATCCGTTTGAGCGACAT 58.459 47.619 0.00 0.00 0.00 3.06
2670 4521 3.369756 TCCGTTTGAGCGACATGTATTTC 59.630 43.478 0.00 0.00 0.00 2.17
2671 4522 3.370978 CCGTTTGAGCGACATGTATTTCT 59.629 43.478 0.00 0.00 0.00 2.52
2676 4527 2.535984 GAGCGACATGTATTTCTGGACG 59.464 50.000 0.00 0.00 0.00 4.79
2678 4529 2.201732 CGACATGTATTTCTGGACGGG 58.798 52.381 0.00 0.00 0.00 5.28
2680 4531 2.169769 GACATGTATTTCTGGACGGGGA 59.830 50.000 0.00 0.00 0.00 4.81
2682 4533 3.206150 CATGTATTTCTGGACGGGGAAG 58.794 50.000 0.00 0.00 0.00 3.46
2683 4534 2.262637 TGTATTTCTGGACGGGGAAGT 58.737 47.619 0.00 0.00 0.00 3.01
2684 4535 3.443052 TGTATTTCTGGACGGGGAAGTA 58.557 45.455 0.00 0.00 0.00 2.24
2728 4579 4.832266 AGTCCACCTGCTCATCTTAGATAG 59.168 45.833 0.00 0.00 0.00 2.08
2740 4591 7.044380 GCTCATCTTAGATAGCGAATAACATCG 60.044 40.741 0.00 0.00 45.41 3.84
2742 4593 7.963465 TCATCTTAGATAGCGAATAACATCGTC 59.037 37.037 0.00 0.00 44.49 4.20
2760 4611 0.321671 TCTGAAGTGGCACTACCTGC 59.678 55.000 22.37 8.78 46.31 4.85
2802 4653 5.513788 GCAGCTTATAATGGATCAGGAAGGA 60.514 44.000 0.00 0.00 0.00 3.36
2894 4745 2.288213 TGAACAAACACACCAAAACGCA 60.288 40.909 0.00 0.00 0.00 5.24
2902 4753 5.734855 ACACACCAAAACGCATCTATATC 57.265 39.130 0.00 0.00 0.00 1.63
2903 4754 5.182487 ACACACCAAAACGCATCTATATCA 58.818 37.500 0.00 0.00 0.00 2.15
2904 4755 5.822519 ACACACCAAAACGCATCTATATCAT 59.177 36.000 0.00 0.00 0.00 2.45
2905 4756 6.017934 ACACACCAAAACGCATCTATATCATC 60.018 38.462 0.00 0.00 0.00 2.92
2906 4757 5.470098 ACACCAAAACGCATCTATATCATCC 59.530 40.000 0.00 0.00 0.00 3.51
2907 4758 4.690748 ACCAAAACGCATCTATATCATCCG 59.309 41.667 0.00 0.00 0.00 4.18
2962 4814 8.106247 AGTGAACAGAGAAGTAAACAAACAAA 57.894 30.769 0.00 0.00 0.00 2.83
3028 4880 7.898309 GCTATACGTGTATTATAAGCATGCAAC 59.102 37.037 21.98 6.52 0.00 4.17
3150 5002 3.444703 CGGAGCAATTGAGCTACTACT 57.555 47.619 10.34 0.00 46.75 2.57
3178 5030 7.728847 TTTGTGCATTATAGTATAGTGCCAG 57.271 36.000 26.06 0.75 35.03 4.85
3197 5049 4.399303 GCCAGCACACAGGATAAATTAAGT 59.601 41.667 0.00 0.00 0.00 2.24
3241 5093 4.437390 GCCAAGTACCAACTCATCATTTCG 60.437 45.833 0.00 0.00 33.75 3.46
3256 5108 4.299978 TCATTTCGTATCACAACGTCACA 58.700 39.130 0.00 0.00 43.31 3.58
3328 5180 7.652909 TCAAACATGTGTTTTGAGAATTCCATC 59.347 33.333 8.32 0.00 45.07 3.51
3329 5181 6.906157 ACATGTGTTTTGAGAATTCCATCT 57.094 33.333 0.00 0.00 0.00 2.90
3330 5182 6.684686 ACATGTGTTTTGAGAATTCCATCTG 58.315 36.000 0.00 0.00 0.00 2.90
3332 5184 5.139727 TGTGTTTTGAGAATTCCATCTGGT 58.860 37.500 0.65 0.00 36.34 4.00
3333 5185 5.009911 TGTGTTTTGAGAATTCCATCTGGTG 59.990 40.000 0.65 0.00 36.34 4.17
3343 5195 0.321671 CCATCTGGTGGTCGTGAACT 59.678 55.000 0.00 0.00 43.44 3.01
3344 5196 1.270839 CCATCTGGTGGTCGTGAACTT 60.271 52.381 0.00 0.00 43.44 2.66
3345 5197 1.800586 CATCTGGTGGTCGTGAACTTG 59.199 52.381 0.00 0.00 0.00 3.16
3347 5199 0.937304 CTGGTGGTCGTGAACTTGTG 59.063 55.000 0.00 0.00 0.00 3.33
3385 5243 4.574674 ATCTGCTATGACCCAAGAACAA 57.425 40.909 0.00 0.00 0.00 2.83
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.584325 AGGCTTGAATAAAGAACTGTTGCA 59.416 37.500 0.00 0.00 38.24 4.08
3 4 5.827797 TCACAGGCTTGAATAAAGAACTGTT 59.172 36.000 1.40 0.00 45.57 3.16
7 8 6.319141 AGTTCACAGGCTTGAATAAAGAAC 57.681 37.500 1.40 6.83 37.80 3.01
8 9 7.308589 GCTTAGTTCACAGGCTTGAATAAAGAA 60.309 37.037 22.54 12.01 37.80 2.52
9 10 6.149474 GCTTAGTTCACAGGCTTGAATAAAGA 59.851 38.462 22.54 9.54 37.80 2.52
10 11 6.317857 GCTTAGTTCACAGGCTTGAATAAAG 58.682 40.000 1.40 18.76 37.80 1.85
12 13 4.700213 GGCTTAGTTCACAGGCTTGAATAA 59.300 41.667 1.40 11.25 37.80 1.40
13 14 4.261801 GGCTTAGTTCACAGGCTTGAATA 58.738 43.478 1.40 6.50 37.80 1.75
14 15 3.084786 GGCTTAGTTCACAGGCTTGAAT 58.915 45.455 1.40 7.16 37.80 2.57
15 16 2.158682 TGGCTTAGTTCACAGGCTTGAA 60.159 45.455 1.40 7.67 36.54 2.69
17 18 1.537202 GTGGCTTAGTTCACAGGCTTG 59.463 52.381 0.00 0.00 36.54 4.01
19 20 0.764890 TGTGGCTTAGTTCACAGGCT 59.235 50.000 6.48 0.00 38.75 4.58
21 22 1.470098 GCATGTGGCTTAGTTCACAGG 59.530 52.381 14.28 14.28 45.45 4.00
22 23 2.153645 TGCATGTGGCTTAGTTCACAG 58.846 47.619 13.53 8.61 45.45 3.66
23 24 2.153645 CTGCATGTGGCTTAGTTCACA 58.846 47.619 11.36 11.36 46.15 3.58
26 27 4.708726 AAATCTGCATGTGGCTTAGTTC 57.291 40.909 0.00 0.00 45.15 3.01
27 28 6.015519 TGTTTAAATCTGCATGTGGCTTAGTT 60.016 34.615 0.00 0.00 45.15 2.24
28 29 5.476599 TGTTTAAATCTGCATGTGGCTTAGT 59.523 36.000 0.00 0.00 45.15 2.24
29 30 5.801947 GTGTTTAAATCTGCATGTGGCTTAG 59.198 40.000 0.00 0.00 45.15 2.18
30 31 5.618863 CGTGTTTAAATCTGCATGTGGCTTA 60.619 40.000 0.00 0.00 45.15 3.09
31 32 4.559153 GTGTTTAAATCTGCATGTGGCTT 58.441 39.130 0.00 0.00 45.15 4.35
32 33 3.366273 CGTGTTTAAATCTGCATGTGGCT 60.366 43.478 0.00 0.00 45.15 4.75
34 35 4.159377 ACGTGTTTAAATCTGCATGTGG 57.841 40.909 0.00 0.00 30.88 4.17
35 36 5.914635 AGAAACGTGTTTAAATCTGCATGTG 59.085 36.000 0.00 0.00 32.23 3.21
36 37 5.914635 CAGAAACGTGTTTAAATCTGCATGT 59.085 36.000 0.00 0.00 32.11 3.21
37 38 6.142139 TCAGAAACGTGTTTAAATCTGCATG 58.858 36.000 8.68 2.81 32.11 4.06
38 39 6.312399 TCAGAAACGTGTTTAAATCTGCAT 57.688 33.333 8.68 0.00 32.11 3.96
39 40 5.743026 TCAGAAACGTGTTTAAATCTGCA 57.257 34.783 8.68 0.00 32.11 4.41
40 41 6.427150 TCTTCAGAAACGTGTTTAAATCTGC 58.573 36.000 8.68 0.00 32.11 4.26
41 42 9.107367 GATTCTTCAGAAACGTGTTTAAATCTG 57.893 33.333 7.60 7.60 37.61 2.90
42 43 8.836413 TGATTCTTCAGAAACGTGTTTAAATCT 58.164 29.630 0.00 0.00 37.61 2.40
43 44 9.445786 TTGATTCTTCAGAAACGTGTTTAAATC 57.554 29.630 0.00 3.28 37.61 2.17
44 45 9.796120 TTTGATTCTTCAGAAACGTGTTTAAAT 57.204 25.926 0.00 0.00 37.61 1.40
45 46 9.796120 ATTTGATTCTTCAGAAACGTGTTTAAA 57.204 25.926 0.00 0.00 37.61 1.52
46 47 9.232082 CATTTGATTCTTCAGAAACGTGTTTAA 57.768 29.630 0.00 0.00 37.61 1.52
48 49 7.220683 CACATTTGATTCTTCAGAAACGTGTTT 59.779 33.333 0.00 0.00 37.61 2.83
49 50 6.692681 CACATTTGATTCTTCAGAAACGTGTT 59.307 34.615 0.00 0.00 37.61 3.32
51 52 6.141211 CACACATTTGATTCTTCAGAAACGTG 59.859 38.462 0.00 0.00 37.61 4.49
52 53 6.038161 TCACACATTTGATTCTTCAGAAACGT 59.962 34.615 0.00 0.00 37.61 3.99
53 54 6.429624 TCACACATTTGATTCTTCAGAAACG 58.570 36.000 0.00 0.00 37.61 3.60
55 56 8.415553 ACATTCACACATTTGATTCTTCAGAAA 58.584 29.630 0.00 0.00 37.61 2.52
57 58 7.514784 ACATTCACACATTTGATTCTTCAGA 57.485 32.000 0.00 0.00 32.27 3.27
58 59 8.291740 TGTACATTCACACATTTGATTCTTCAG 58.708 33.333 0.00 0.00 32.27 3.02
62 63 8.412456 TGTTTGTACATTCACACATTTGATTCT 58.588 29.630 0.00 0.00 0.00 2.40
63 64 8.572828 TGTTTGTACATTCACACATTTGATTC 57.427 30.769 0.00 0.00 0.00 2.52
64 65 8.939201 TTGTTTGTACATTCACACATTTGATT 57.061 26.923 0.00 0.00 33.44 2.57
65 66 8.816144 GTTTGTTTGTACATTCACACATTTGAT 58.184 29.630 0.00 0.00 33.44 2.57
66 67 8.031864 AGTTTGTTTGTACATTCACACATTTGA 58.968 29.630 14.80 0.00 33.44 2.69
67 68 8.109391 CAGTTTGTTTGTACATTCACACATTTG 58.891 33.333 14.80 5.70 33.44 2.32
68 69 7.201513 GCAGTTTGTTTGTACATTCACACATTT 60.202 33.333 14.80 0.00 33.44 2.32
69 70 6.255453 GCAGTTTGTTTGTACATTCACACATT 59.745 34.615 14.80 1.50 33.44 2.71
70 71 5.748152 GCAGTTTGTTTGTACATTCACACAT 59.252 36.000 14.80 3.49 33.44 3.21
72 73 5.339990 AGCAGTTTGTTTGTACATTCACAC 58.660 37.500 0.00 2.94 33.44 3.82
74 75 6.529829 TGAAAGCAGTTTGTTTGTACATTCAC 59.470 34.615 0.00 0.00 33.44 3.18
75 76 6.625362 TGAAAGCAGTTTGTTTGTACATTCA 58.375 32.000 0.00 0.00 33.44 2.57
76 77 7.698836 ATGAAAGCAGTTTGTTTGTACATTC 57.301 32.000 0.00 0.00 33.44 2.67
78 79 9.840427 GTATATGAAAGCAGTTTGTTTGTACAT 57.160 29.630 0.00 0.00 33.44 2.29
79 80 9.062524 AGTATATGAAAGCAGTTTGTTTGTACA 57.937 29.630 0.00 0.00 0.00 2.90
80 81 9.893305 AAGTATATGAAAGCAGTTTGTTTGTAC 57.107 29.630 0.00 0.00 0.00 2.90
82 83 8.082242 GGAAGTATATGAAAGCAGTTTGTTTGT 58.918 33.333 0.00 0.00 0.00 2.83
83 84 8.299570 AGGAAGTATATGAAAGCAGTTTGTTTG 58.700 33.333 0.00 0.00 0.00 2.93
84 85 8.409358 AGGAAGTATATGAAAGCAGTTTGTTT 57.591 30.769 0.00 0.00 0.00 2.83
85 86 8.299570 CAAGGAAGTATATGAAAGCAGTTTGTT 58.700 33.333 0.00 0.00 0.00 2.83
86 87 7.094205 CCAAGGAAGTATATGAAAGCAGTTTGT 60.094 37.037 0.00 0.00 0.00 2.83
87 88 7.094205 ACCAAGGAAGTATATGAAAGCAGTTTG 60.094 37.037 0.00 0.00 0.00 2.93
88 89 6.948309 ACCAAGGAAGTATATGAAAGCAGTTT 59.052 34.615 0.00 0.00 0.00 2.66
91 92 5.529060 GGACCAAGGAAGTATATGAAAGCAG 59.471 44.000 0.00 0.00 0.00 4.24
92 93 5.437060 GGACCAAGGAAGTATATGAAAGCA 58.563 41.667 0.00 0.00 0.00 3.91
93 94 4.822350 GGGACCAAGGAAGTATATGAAAGC 59.178 45.833 0.00 0.00 0.00 3.51
94 95 6.001449 TGGGACCAAGGAAGTATATGAAAG 57.999 41.667 0.00 0.00 0.00 2.62
95 96 6.395780 TTGGGACCAAGGAAGTATATGAAA 57.604 37.500 0.00 0.00 0.00 2.69
96 97 6.395780 TTTGGGACCAAGGAAGTATATGAA 57.604 37.500 3.73 0.00 37.24 2.57
97 98 6.395780 TTTTGGGACCAAGGAAGTATATGA 57.604 37.500 3.73 0.00 37.24 2.15
100 101 7.832187 CACTTATTTTGGGACCAAGGAAGTATA 59.168 37.037 18.67 5.93 37.24 1.47
102 103 6.007703 CACTTATTTTGGGACCAAGGAAGTA 58.992 40.000 18.67 1.60 37.24 2.24
103 104 4.832823 CACTTATTTTGGGACCAAGGAAGT 59.167 41.667 15.69 15.69 37.24 3.01
104 105 4.832823 ACACTTATTTTGGGACCAAGGAAG 59.167 41.667 14.82 14.82 37.24 3.46
105 106 4.810345 ACACTTATTTTGGGACCAAGGAA 58.190 39.130 3.73 0.00 37.24 3.36
106 107 4.105697 AGACACTTATTTTGGGACCAAGGA 59.894 41.667 3.73 0.00 37.24 3.36
108 109 5.070001 TGAGACACTTATTTTGGGACCAAG 58.930 41.667 3.73 0.00 37.24 3.61
109 110 5.055265 TGAGACACTTATTTTGGGACCAA 57.945 39.130 0.00 0.00 0.00 3.67
110 111 4.715534 TGAGACACTTATTTTGGGACCA 57.284 40.909 0.00 0.00 0.00 4.02
111 112 5.070685 AGTTGAGACACTTATTTTGGGACC 58.929 41.667 0.00 0.00 0.00 4.46
112 113 6.635030 AAGTTGAGACACTTATTTTGGGAC 57.365 37.500 0.00 0.00 35.10 4.46
113 114 6.605594 ACAAAGTTGAGACACTTATTTTGGGA 59.394 34.615 0.00 0.00 35.87 4.37
114 115 6.805713 ACAAAGTTGAGACACTTATTTTGGG 58.194 36.000 0.00 0.00 35.87 4.12
115 116 8.621286 ACTACAAAGTTGAGACACTTATTTTGG 58.379 33.333 0.00 0.00 35.87 3.28
162 163 8.813282 CCCAAAATAAGTGTTTCAACTTTGTAC 58.187 33.333 0.00 0.00 40.77 2.90
163 164 8.750298 TCCCAAAATAAGTGTTTCAACTTTGTA 58.250 29.630 0.00 0.00 40.77 2.41
165 166 7.253950 CGTCCCAAAATAAGTGTTTCAACTTTG 60.254 37.037 0.00 0.00 40.77 2.77
166 167 6.754675 CGTCCCAAAATAAGTGTTTCAACTTT 59.245 34.615 0.00 0.00 40.77 2.66
167 168 6.270064 CGTCCCAAAATAAGTGTTTCAACTT 58.730 36.000 0.00 0.00 42.89 2.66
168 169 5.221165 CCGTCCCAAAATAAGTGTTTCAACT 60.221 40.000 0.00 0.00 0.00 3.16
169 170 4.979815 CCGTCCCAAAATAAGTGTTTCAAC 59.020 41.667 0.00 0.00 0.00 3.18
170 171 4.888239 TCCGTCCCAAAATAAGTGTTTCAA 59.112 37.500 0.00 0.00 0.00 2.69
171 172 4.462133 TCCGTCCCAAAATAAGTGTTTCA 58.538 39.130 0.00 0.00 0.00 2.69
172 173 4.082949 CCTCCGTCCCAAAATAAGTGTTTC 60.083 45.833 0.00 0.00 0.00 2.78
175 176 2.290705 CCCTCCGTCCCAAAATAAGTGT 60.291 50.000 0.00 0.00 0.00 3.55
176 177 2.026636 TCCCTCCGTCCCAAAATAAGTG 60.027 50.000 0.00 0.00 0.00 3.16
177 178 2.238898 CTCCCTCCGTCCCAAAATAAGT 59.761 50.000 0.00 0.00 0.00 2.24
179 180 2.271777 ACTCCCTCCGTCCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
180 181 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
181 182 1.961133 TACTCCCTCCGTCCCAAAAT 58.039 50.000 0.00 0.00 0.00 1.82
182 183 1.961133 ATACTCCCTCCGTCCCAAAA 58.039 50.000 0.00 0.00 0.00 2.44
184 185 1.961133 AAATACTCCCTCCGTCCCAA 58.039 50.000 0.00 0.00 0.00 4.12
186 187 1.835531 TCAAAATACTCCCTCCGTCCC 59.164 52.381 0.00 0.00 0.00 4.46
187 188 2.764572 TCTCAAAATACTCCCTCCGTCC 59.235 50.000 0.00 0.00 0.00 4.79
188 189 3.700038 TCTCTCAAAATACTCCCTCCGTC 59.300 47.826 0.00 0.00 0.00 4.79
189 190 3.709587 TCTCTCAAAATACTCCCTCCGT 58.290 45.455 0.00 0.00 0.00 4.69
190 191 4.946478 ATCTCTCAAAATACTCCCTCCG 57.054 45.455 0.00 0.00 0.00 4.63
191 192 7.368198 ACTAATCTCTCAAAATACTCCCTCC 57.632 40.000 0.00 0.00 0.00 4.30
195 196 8.411683 TCGGTTACTAATCTCTCAAAATACTCC 58.588 37.037 0.00 0.00 0.00 3.85
196 197 9.453325 CTCGGTTACTAATCTCTCAAAATACTC 57.547 37.037 0.00 0.00 0.00 2.59
197 198 8.414778 CCTCGGTTACTAATCTCTCAAAATACT 58.585 37.037 0.00 0.00 0.00 2.12
198 199 7.652507 CCCTCGGTTACTAATCTCTCAAAATAC 59.347 40.741 0.00 0.00 0.00 1.89
199 200 7.562454 TCCCTCGGTTACTAATCTCTCAAAATA 59.438 37.037 0.00 0.00 0.00 1.40
200 201 6.383147 TCCCTCGGTTACTAATCTCTCAAAAT 59.617 38.462 0.00 0.00 0.00 1.82
202 203 5.266788 TCCCTCGGTTACTAATCTCTCAAA 58.733 41.667 0.00 0.00 0.00 2.69
203 204 4.863548 TCCCTCGGTTACTAATCTCTCAA 58.136 43.478 0.00 0.00 0.00 3.02
204 205 4.515028 TCCCTCGGTTACTAATCTCTCA 57.485 45.455 0.00 0.00 0.00 3.27
205 206 6.217294 CAATTCCCTCGGTTACTAATCTCTC 58.783 44.000 0.00 0.00 0.00 3.20
206 207 5.453480 GCAATTCCCTCGGTTACTAATCTCT 60.453 44.000 0.00 0.00 0.00 3.10
207 208 4.750598 GCAATTCCCTCGGTTACTAATCTC 59.249 45.833 0.00 0.00 0.00 2.75
208 209 4.704965 GCAATTCCCTCGGTTACTAATCT 58.295 43.478 0.00 0.00 0.00 2.40
209 210 3.493503 CGCAATTCCCTCGGTTACTAATC 59.506 47.826 0.00 0.00 0.00 1.75
211 212 2.234414 ACGCAATTCCCTCGGTTACTAA 59.766 45.455 0.00 0.00 0.00 2.24
212 213 1.826720 ACGCAATTCCCTCGGTTACTA 59.173 47.619 0.00 0.00 0.00 1.82
213 214 0.611714 ACGCAATTCCCTCGGTTACT 59.388 50.000 0.00 0.00 0.00 2.24
214 215 1.445871 AACGCAATTCCCTCGGTTAC 58.554 50.000 0.00 0.00 0.00 2.50
215 216 2.078392 GAAACGCAATTCCCTCGGTTA 58.922 47.619 0.00 0.00 32.87 2.85
216 217 0.879090 GAAACGCAATTCCCTCGGTT 59.121 50.000 0.00 0.00 35.68 4.44
217 218 0.036306 AGAAACGCAATTCCCTCGGT 59.964 50.000 0.00 0.00 0.00 4.69
219 220 1.438651 TGAGAAACGCAATTCCCTCG 58.561 50.000 0.00 0.00 0.00 4.63
220 221 2.552315 TGTTGAGAAACGCAATTCCCTC 59.448 45.455 0.00 0.00 0.00 4.30
221 222 2.554032 CTGTTGAGAAACGCAATTCCCT 59.446 45.455 0.00 0.00 0.00 4.20
222 223 2.293399 ACTGTTGAGAAACGCAATTCCC 59.707 45.455 0.00 0.00 0.00 3.97
223 224 3.003275 TCACTGTTGAGAAACGCAATTCC 59.997 43.478 0.00 0.00 0.00 3.01
224 225 3.968724 GTCACTGTTGAGAAACGCAATTC 59.031 43.478 0.00 0.00 30.10 2.17
225 226 3.243068 GGTCACTGTTGAGAAACGCAATT 60.243 43.478 0.00 0.00 30.10 2.32
226 227 2.290641 GGTCACTGTTGAGAAACGCAAT 59.709 45.455 0.00 0.00 30.10 3.56
227 228 1.668751 GGTCACTGTTGAGAAACGCAA 59.331 47.619 0.00 0.00 30.10 4.85
228 229 1.295792 GGTCACTGTTGAGAAACGCA 58.704 50.000 0.00 0.00 30.10 5.24
230 231 3.194861 TCTTGGTCACTGTTGAGAAACG 58.805 45.455 0.00 0.00 30.10 3.60
233 234 5.997746 CCTTTATCTTGGTCACTGTTGAGAA 59.002 40.000 0.00 0.00 30.10 2.87
234 235 5.513094 CCCTTTATCTTGGTCACTGTTGAGA 60.513 44.000 0.00 0.00 30.10 3.27
235 236 4.697352 CCCTTTATCTTGGTCACTGTTGAG 59.303 45.833 0.00 0.00 30.10 3.02
236 237 4.651778 CCCTTTATCTTGGTCACTGTTGA 58.348 43.478 0.00 0.00 0.00 3.18
238 239 3.074538 AGCCCTTTATCTTGGTCACTGTT 59.925 43.478 0.00 0.00 0.00 3.16
240 241 3.274288 GAGCCCTTTATCTTGGTCACTG 58.726 50.000 0.00 0.00 0.00 3.66
241 242 2.912956 TGAGCCCTTTATCTTGGTCACT 59.087 45.455 0.00 0.00 30.96 3.41
242 243 3.010420 GTGAGCCCTTTATCTTGGTCAC 58.990 50.000 5.13 5.13 45.35 3.67
243 244 2.642311 TGTGAGCCCTTTATCTTGGTCA 59.358 45.455 0.00 0.00 33.27 4.02
244 245 3.350219 TGTGAGCCCTTTATCTTGGTC 57.650 47.619 0.00 0.00 0.00 4.02
247 248 5.649782 AACAATGTGAGCCCTTTATCTTG 57.350 39.130 0.00 0.00 0.00 3.02
248 249 5.774690 TGAAACAATGTGAGCCCTTTATCTT 59.225 36.000 0.00 0.00 0.00 2.40
249 250 5.324409 TGAAACAATGTGAGCCCTTTATCT 58.676 37.500 0.00 0.00 0.00 1.98
250 251 5.643379 TGAAACAATGTGAGCCCTTTATC 57.357 39.130 0.00 0.00 0.00 1.75
251 252 6.400568 CATTGAAACAATGTGAGCCCTTTAT 58.599 36.000 14.01 0.00 0.00 1.40
252 253 5.782047 CATTGAAACAATGTGAGCCCTTTA 58.218 37.500 14.01 0.00 0.00 1.85
253 254 4.634199 CATTGAAACAATGTGAGCCCTTT 58.366 39.130 14.01 0.00 0.00 3.11
254 255 3.555586 GCATTGAAACAATGTGAGCCCTT 60.556 43.478 20.42 0.00 0.00 3.95
255 256 2.028748 GCATTGAAACAATGTGAGCCCT 60.029 45.455 20.42 0.00 0.00 5.19
256 257 2.340337 GCATTGAAACAATGTGAGCCC 58.660 47.619 20.42 4.73 0.00 5.19
257 258 2.288948 TGGCATTGAAACAATGTGAGCC 60.289 45.455 20.42 16.62 39.95 4.70
259 260 4.216902 TCTCTGGCATTGAAACAATGTGAG 59.783 41.667 20.42 21.21 0.00 3.51
260 261 4.143543 TCTCTGGCATTGAAACAATGTGA 58.856 39.130 20.42 15.75 0.00 3.58
263 264 5.163893 GCAATTCTCTGGCATTGAAACAATG 60.164 40.000 16.85 16.85 32.91 2.82
266 267 3.321396 TGCAATTCTCTGGCATTGAAACA 59.679 39.130 2.11 2.02 32.91 2.83
268 269 4.603989 TTGCAATTCTCTGGCATTGAAA 57.396 36.364 0.00 0.00 37.39 2.69
269 270 4.221041 TGATTGCAATTCTCTGGCATTGAA 59.779 37.500 14.33 3.71 37.39 2.69
270 271 3.764972 TGATTGCAATTCTCTGGCATTGA 59.235 39.130 14.33 0.00 37.39 2.57
271 272 4.112634 CTGATTGCAATTCTCTGGCATTG 58.887 43.478 14.33 0.00 37.39 2.82
272 273 3.132289 CCTGATTGCAATTCTCTGGCATT 59.868 43.478 14.33 0.00 37.39 3.56
273 274 2.693591 CCTGATTGCAATTCTCTGGCAT 59.306 45.455 14.33 0.00 37.39 4.40
274 275 2.097036 CCTGATTGCAATTCTCTGGCA 58.903 47.619 14.33 4.01 35.41 4.92
275 276 2.098770 GTCCTGATTGCAATTCTCTGGC 59.901 50.000 14.33 7.93 0.00 4.85
276 277 2.353889 CGTCCTGATTGCAATTCTCTGG 59.646 50.000 14.33 14.70 0.00 3.86
277 278 2.353889 CCGTCCTGATTGCAATTCTCTG 59.646 50.000 14.33 5.95 0.00 3.35
278 279 2.026822 ACCGTCCTGATTGCAATTCTCT 60.027 45.455 14.33 0.00 0.00 3.10
280 281 2.496899 ACCGTCCTGATTGCAATTCT 57.503 45.000 14.33 0.00 0.00 2.40
281 282 2.032178 GCTACCGTCCTGATTGCAATTC 59.968 50.000 14.33 7.58 0.00 2.17
283 284 1.210478 AGCTACCGTCCTGATTGCAAT 59.790 47.619 12.83 12.83 0.00 3.56
284 285 0.613260 AGCTACCGTCCTGATTGCAA 59.387 50.000 0.00 0.00 0.00 4.08
285 286 0.613260 AAGCTACCGTCCTGATTGCA 59.387 50.000 0.00 0.00 0.00 4.08
286 287 1.291132 GAAGCTACCGTCCTGATTGC 58.709 55.000 0.00 0.00 0.00 3.56
287 288 1.473434 GGGAAGCTACCGTCCTGATTG 60.473 57.143 2.26 0.00 39.30 2.67
289 290 1.392710 CGGGAAGCTACCGTCCTGAT 61.393 60.000 18.71 0.00 45.55 2.90
290 291 2.050350 CGGGAAGCTACCGTCCTGA 61.050 63.158 18.71 0.00 45.55 3.86
302 303 2.874751 AAAAATCGCGGCGGGAAG 59.125 55.556 30.08 0.00 0.00 3.46
317 318 3.504520 GGCTTCCGTACATCCAAGAAAAA 59.495 43.478 0.00 0.00 0.00 1.94
318 319 3.078837 GGCTTCCGTACATCCAAGAAAA 58.921 45.455 0.00 0.00 0.00 2.29
319 320 2.039216 TGGCTTCCGTACATCCAAGAAA 59.961 45.455 0.00 0.00 0.00 2.52
320 321 1.626321 TGGCTTCCGTACATCCAAGAA 59.374 47.619 0.00 0.00 0.00 2.52
321 322 1.271856 TGGCTTCCGTACATCCAAGA 58.728 50.000 0.00 0.00 0.00 3.02
322 323 2.107950 TTGGCTTCCGTACATCCAAG 57.892 50.000 0.00 0.00 33.37 3.61
324 325 1.134220 GGATTGGCTTCCGTACATCCA 60.134 52.381 0.00 0.00 0.00 3.41
325 326 1.134220 TGGATTGGCTTCCGTACATCC 60.134 52.381 0.00 0.00 38.74 3.51
327 328 2.799126 TTGGATTGGCTTCCGTACAT 57.201 45.000 0.00 0.00 38.74 2.29
329 330 2.752903 ACATTTGGATTGGCTTCCGTAC 59.247 45.455 3.20 0.00 38.74 3.67
330 331 3.013921 GACATTTGGATTGGCTTCCGTA 58.986 45.455 3.20 0.00 38.74 4.02
331 332 1.818674 GACATTTGGATTGGCTTCCGT 59.181 47.619 3.20 0.00 38.74 4.69
332 333 1.818060 TGACATTTGGATTGGCTTCCG 59.182 47.619 3.20 0.00 38.74 4.30
334 335 4.525912 AGTTGACATTTGGATTGGCTTC 57.474 40.909 0.00 0.00 0.00 3.86
335 336 4.961438 AAGTTGACATTTGGATTGGCTT 57.039 36.364 0.00 0.00 0.00 4.35
336 337 4.344679 TCAAAGTTGACATTTGGATTGGCT 59.655 37.500 2.51 0.00 38.04 4.75
337 338 4.630111 TCAAAGTTGACATTTGGATTGGC 58.370 39.130 2.51 0.00 38.04 4.52
350 351 9.424319 GAGATGTTAGATACTTGTCAAAGTTGA 57.576 33.333 0.00 0.00 44.47 3.18
352 353 8.598041 AGGAGATGTTAGATACTTGTCAAAGTT 58.402 33.333 0.00 0.00 44.47 2.66
354 355 9.442047 AAAGGAGATGTTAGATACTTGTCAAAG 57.558 33.333 0.00 0.00 39.49 2.77
355 356 9.219603 CAAAGGAGATGTTAGATACTTGTCAAA 57.780 33.333 0.00 0.00 0.00 2.69
357 358 8.134202 TCAAAGGAGATGTTAGATACTTGTCA 57.866 34.615 0.00 0.00 0.00 3.58
358 359 9.606631 ATTCAAAGGAGATGTTAGATACTTGTC 57.393 33.333 0.00 0.00 0.00 3.18
359 360 9.606631 GATTCAAAGGAGATGTTAGATACTTGT 57.393 33.333 0.00 0.00 0.00 3.16
362 363 9.206690 TCAGATTCAAAGGAGATGTTAGATACT 57.793 33.333 0.00 0.00 0.00 2.12
363 364 9.823647 TTCAGATTCAAAGGAGATGTTAGATAC 57.176 33.333 0.00 0.00 0.00 2.24
427 428 9.725019 TCTCTGACATTAGATACACATTTGTTT 57.275 29.630 0.00 0.00 37.15 2.83
428 429 9.725019 TTCTCTGACATTAGATACACATTTGTT 57.275 29.630 0.00 0.00 37.15 2.83
459 460 9.985730 AGCTGTCAAATATTCTTTCATTCAAAA 57.014 25.926 0.00 0.00 0.00 2.44
460 461 9.414295 CAGCTGTCAAATATTCTTTCATTCAAA 57.586 29.630 5.25 0.00 0.00 2.69
461 462 8.579006 ACAGCTGTCAAATATTCTTTCATTCAA 58.421 29.630 15.25 0.00 0.00 2.69
462 463 8.114331 ACAGCTGTCAAATATTCTTTCATTCA 57.886 30.769 15.25 0.00 0.00 2.57
463 464 7.699812 GGACAGCTGTCAAATATTCTTTCATTC 59.300 37.037 39.71 17.90 46.47 2.67
464 465 7.177216 TGGACAGCTGTCAAATATTCTTTCATT 59.823 33.333 39.71 4.83 46.47 2.57
465 466 6.660521 TGGACAGCTGTCAAATATTCTTTCAT 59.339 34.615 39.71 5.20 46.47 2.57
466 467 6.003326 TGGACAGCTGTCAAATATTCTTTCA 58.997 36.000 39.71 24.21 46.47 2.69
467 468 6.500684 TGGACAGCTGTCAAATATTCTTTC 57.499 37.500 39.71 22.22 46.47 2.62
469 470 7.067494 GGTATTGGACAGCTGTCAAATATTCTT 59.933 37.037 40.03 26.42 46.65 2.52
471 472 6.543831 AGGTATTGGACAGCTGTCAAATATTC 59.456 38.462 40.03 34.31 46.65 1.75
472 473 6.319658 CAGGTATTGGACAGCTGTCAAATATT 59.680 38.462 40.03 31.82 46.65 1.28
474 475 5.185454 CAGGTATTGGACAGCTGTCAAATA 58.815 41.667 36.92 36.92 44.54 1.40
476 477 3.411446 CAGGTATTGGACAGCTGTCAAA 58.589 45.455 39.71 36.62 46.47 2.69
477 478 2.875672 GCAGGTATTGGACAGCTGTCAA 60.876 50.000 39.71 31.47 46.47 3.18
479 480 1.339055 TGCAGGTATTGGACAGCTGTC 60.339 52.381 34.25 34.25 42.23 3.51
480 481 0.692476 TGCAGGTATTGGACAGCTGT 59.308 50.000 21.88 21.88 42.23 4.40
482 483 1.561076 TCATGCAGGTATTGGACAGCT 59.439 47.619 0.00 0.00 33.21 4.24
483 484 2.042686 TCATGCAGGTATTGGACAGC 57.957 50.000 0.00 0.00 0.00 4.40
484 485 4.275196 CAGATTCATGCAGGTATTGGACAG 59.725 45.833 0.00 0.00 0.00 3.51
485 486 4.080413 TCAGATTCATGCAGGTATTGGACA 60.080 41.667 0.00 0.00 0.00 4.02
486 487 4.454678 TCAGATTCATGCAGGTATTGGAC 58.545 43.478 0.00 0.00 0.00 4.02
487 488 4.776435 TCAGATTCATGCAGGTATTGGA 57.224 40.909 0.00 0.00 0.00 3.53
488 489 7.514784 TTTATCAGATTCATGCAGGTATTGG 57.485 36.000 0.00 0.00 0.00 3.16
490 491 8.757982 ACTTTTATCAGATTCATGCAGGTATT 57.242 30.769 0.00 0.00 0.00 1.89
492 493 7.828717 TGAACTTTTATCAGATTCATGCAGGTA 59.171 33.333 0.00 0.00 0.00 3.08
493 494 6.660521 TGAACTTTTATCAGATTCATGCAGGT 59.339 34.615 0.00 0.00 0.00 4.00
494 495 6.971184 GTGAACTTTTATCAGATTCATGCAGG 59.029 38.462 0.00 0.00 32.30 4.85
495 496 6.971184 GGTGAACTTTTATCAGATTCATGCAG 59.029 38.462 0.00 0.00 32.30 4.41
496 497 6.433716 TGGTGAACTTTTATCAGATTCATGCA 59.566 34.615 0.00 0.00 32.30 3.96
497 498 6.855836 TGGTGAACTTTTATCAGATTCATGC 58.144 36.000 0.00 0.00 32.30 4.06
498 499 9.941664 GTATGGTGAACTTTTATCAGATTCATG 57.058 33.333 0.00 0.00 32.30 3.07
499 500 9.125026 GGTATGGTGAACTTTTATCAGATTCAT 57.875 33.333 0.00 0.00 32.30 2.57
500 501 7.556275 GGGTATGGTGAACTTTTATCAGATTCA 59.444 37.037 0.00 0.00 0.00 2.57
501 502 7.556275 TGGGTATGGTGAACTTTTATCAGATTC 59.444 37.037 0.00 0.00 0.00 2.52
504 505 6.381498 TGGGTATGGTGAACTTTTATCAGA 57.619 37.500 0.00 0.00 0.00 3.27
532 533 7.963532 TGAAGATGTCTTACTGTCTAGGTTTT 58.036 34.615 0.00 0.00 36.11 2.43
533 534 7.540474 TGAAGATGTCTTACTGTCTAGGTTT 57.460 36.000 0.00 0.00 36.11 3.27
534 535 7.540474 TTGAAGATGTCTTACTGTCTAGGTT 57.460 36.000 0.00 0.00 36.11 3.50
536 537 8.091449 AGTTTTGAAGATGTCTTACTGTCTAGG 58.909 37.037 0.00 0.00 36.11 3.02
537 538 9.134734 GAGTTTTGAAGATGTCTTACTGTCTAG 57.865 37.037 0.00 0.00 36.11 2.43
539 540 7.500992 TGAGTTTTGAAGATGTCTTACTGTCT 58.499 34.615 0.00 0.00 36.11 3.41
540 541 7.653713 TCTGAGTTTTGAAGATGTCTTACTGTC 59.346 37.037 0.00 0.00 36.11 3.51
541 542 7.500992 TCTGAGTTTTGAAGATGTCTTACTGT 58.499 34.615 0.00 0.00 36.11 3.55
542 543 7.953158 TCTGAGTTTTGAAGATGTCTTACTG 57.047 36.000 0.00 0.00 36.11 2.74
546 547 9.129532 AGAAAATCTGAGTTTTGAAGATGTCTT 57.870 29.630 4.47 0.00 33.69 3.01
547 548 8.688747 AGAAAATCTGAGTTTTGAAGATGTCT 57.311 30.769 4.47 0.00 31.80 3.41
563 564 8.767478 ACATTCCTAAAAATGCAGAAAATCTG 57.233 30.769 3.00 3.00 46.90 2.90
567 568 9.691362 GAGTAACATTCCTAAAAATGCAGAAAA 57.309 29.630 0.00 0.00 39.72 2.29
568 569 8.855110 TGAGTAACATTCCTAAAAATGCAGAAA 58.145 29.630 0.00 0.00 39.72 2.52
569 570 8.296713 GTGAGTAACATTCCTAAAAATGCAGAA 58.703 33.333 0.00 0.00 39.72 3.02
570 571 7.446931 TGTGAGTAACATTCCTAAAAATGCAGA 59.553 33.333 0.00 0.00 39.72 4.26
571 572 7.592938 TGTGAGTAACATTCCTAAAAATGCAG 58.407 34.615 0.00 0.00 39.72 4.41
573 574 7.593825 ACTGTGAGTAACATTCCTAAAAATGC 58.406 34.615 0.00 0.00 39.72 3.56
576 577 9.787435 ACATACTGTGAGTAACATTCCTAAAAA 57.213 29.630 0.00 0.00 38.39 1.94
577 578 9.787435 AACATACTGTGAGTAACATTCCTAAAA 57.213 29.630 0.00 0.00 38.39 1.52
579 580 7.822334 CCAACATACTGTGAGTAACATTCCTAA 59.178 37.037 0.00 0.00 38.39 2.69
581 582 6.173339 CCAACATACTGTGAGTAACATTCCT 58.827 40.000 0.00 0.00 38.39 3.36
582 583 5.938125 ACCAACATACTGTGAGTAACATTCC 59.062 40.000 0.00 0.00 38.39 3.01
585 586 4.695455 GCACCAACATACTGTGAGTAACAT 59.305 41.667 0.00 0.00 38.39 2.71
586 587 4.062293 GCACCAACATACTGTGAGTAACA 58.938 43.478 0.00 0.00 33.89 2.41
588 589 3.670625 GGCACCAACATACTGTGAGTAA 58.329 45.455 0.00 0.00 33.89 2.24
589 590 2.353307 CGGCACCAACATACTGTGAGTA 60.353 50.000 0.00 0.00 34.82 2.59
591 592 1.078709 CGGCACCAACATACTGTGAG 58.921 55.000 0.00 0.00 31.66 3.51
592 593 0.953471 GCGGCACCAACATACTGTGA 60.953 55.000 0.00 0.00 31.66 3.58
593 594 1.233950 TGCGGCACCAACATACTGTG 61.234 55.000 0.00 0.00 0.00 3.66
594 595 0.322456 ATGCGGCACCAACATACTGT 60.322 50.000 4.03 0.00 0.00 3.55
595 596 0.099259 CATGCGGCACCAACATACTG 59.901 55.000 4.03 0.00 0.00 2.74
596 597 0.322456 ACATGCGGCACCAACATACT 60.322 50.000 4.03 0.00 0.00 2.12
597 598 0.179166 CACATGCGGCACCAACATAC 60.179 55.000 4.03 0.00 0.00 2.39
599 600 1.588824 CTCACATGCGGCACCAACAT 61.589 55.000 4.03 0.00 0.00 2.71
600 601 2.203266 TCACATGCGGCACCAACA 60.203 55.556 4.03 0.00 0.00 3.33
601 602 1.795170 AACTCACATGCGGCACCAAC 61.795 55.000 4.03 0.00 0.00 3.77
603 604 0.953471 GTAACTCACATGCGGCACCA 60.953 55.000 4.03 0.00 0.00 4.17
604 605 1.644786 GGTAACTCACATGCGGCACC 61.645 60.000 4.03 0.00 0.00 5.01
605 606 0.953471 TGGTAACTCACATGCGGCAC 60.953 55.000 4.03 0.00 37.61 5.01
606 607 0.035534 ATGGTAACTCACATGCGGCA 60.036 50.000 4.58 4.58 37.61 5.69
607 608 0.378257 CATGGTAACTCACATGCGGC 59.622 55.000 0.00 0.00 38.15 6.53
608 609 2.022764 TCATGGTAACTCACATGCGG 57.977 50.000 0.00 0.00 43.11 5.69
609 610 4.621068 AAATCATGGTAACTCACATGCG 57.379 40.909 0.00 0.00 43.11 4.73
610 611 5.953183 TGAAAATCATGGTAACTCACATGC 58.047 37.500 0.00 0.00 43.11 4.06
611 612 8.991243 AAATGAAAATCATGGTAACTCACATG 57.009 30.769 0.00 0.00 44.40 3.21
612 613 9.643693 GAAAATGAAAATCATGGTAACTCACAT 57.356 29.630 0.00 0.00 37.15 3.21
613 614 8.637099 TGAAAATGAAAATCATGGTAACTCACA 58.363 29.630 0.00 0.00 37.15 3.58
672 673 8.382130 GTGATGGTAAATGTTGCATTTGTATTG 58.618 33.333 14.99 0.00 0.00 1.90
674 675 7.545265 GTGTGATGGTAAATGTTGCATTTGTAT 59.455 33.333 14.99 7.97 0.00 2.29
675 676 6.865726 GTGTGATGGTAAATGTTGCATTTGTA 59.134 34.615 14.99 4.36 0.00 2.41
676 677 5.695816 GTGTGATGGTAAATGTTGCATTTGT 59.304 36.000 14.99 1.94 0.00 2.83
677 678 5.695363 TGTGTGATGGTAAATGTTGCATTTG 59.305 36.000 14.99 0.00 0.00 2.32
678 679 5.695816 GTGTGTGATGGTAAATGTTGCATTT 59.304 36.000 11.18 11.18 0.00 2.32
680 681 4.615682 CGTGTGTGATGGTAAATGTTGCAT 60.616 41.667 0.00 0.00 0.00 3.96
681 682 3.304324 CGTGTGTGATGGTAAATGTTGCA 60.304 43.478 0.00 0.00 0.00 4.08
682 683 3.233578 CGTGTGTGATGGTAAATGTTGC 58.766 45.455 0.00 0.00 0.00 4.17
683 684 3.233578 GCGTGTGTGATGGTAAATGTTG 58.766 45.455 0.00 0.00 0.00 3.33
685 686 1.810151 GGCGTGTGTGATGGTAAATGT 59.190 47.619 0.00 0.00 0.00 2.71
686 687 1.132262 GGGCGTGTGTGATGGTAAATG 59.868 52.381 0.00 0.00 0.00 2.32
688 689 0.398696 AGGGCGTGTGTGATGGTAAA 59.601 50.000 0.00 0.00 0.00 2.01
690 691 0.036765 GAAGGGCGTGTGTGATGGTA 60.037 55.000 0.00 0.00 0.00 3.25
691 692 1.302511 GAAGGGCGTGTGTGATGGT 60.303 57.895 0.00 0.00 0.00 3.55
694 695 2.420129 GGATTAGAAGGGCGTGTGTGAT 60.420 50.000 0.00 0.00 0.00 3.06
695 696 1.066430 GGATTAGAAGGGCGTGTGTGA 60.066 52.381 0.00 0.00 0.00 3.58
697 698 1.276622 AGGATTAGAAGGGCGTGTGT 58.723 50.000 0.00 0.00 0.00 3.72
699 700 3.028094 TCTAGGATTAGAAGGGCGTGT 57.972 47.619 0.00 0.00 33.01 4.49
700 701 3.132289 TGTTCTAGGATTAGAAGGGCGTG 59.868 47.826 0.00 0.00 44.42 5.34
701 702 3.371965 TGTTCTAGGATTAGAAGGGCGT 58.628 45.455 0.00 0.00 44.42 5.68
702 703 3.385111 ACTGTTCTAGGATTAGAAGGGCG 59.615 47.826 0.00 0.00 44.42 6.13
704 705 6.070194 TGGAAACTGTTCTAGGATTAGAAGGG 60.070 42.308 0.00 0.00 44.42 3.95
705 706 6.947464 TGGAAACTGTTCTAGGATTAGAAGG 58.053 40.000 0.00 0.00 44.42 3.46
706 707 7.550906 CCTTGGAAACTGTTCTAGGATTAGAAG 59.449 40.741 4.47 0.00 44.42 2.85
707 708 7.017254 ACCTTGGAAACTGTTCTAGGATTAGAA 59.983 37.037 13.75 0.00 42.25 2.10
708 709 6.500751 ACCTTGGAAACTGTTCTAGGATTAGA 59.499 38.462 13.75 0.00 38.17 2.10
709 710 6.712276 ACCTTGGAAACTGTTCTAGGATTAG 58.288 40.000 13.75 0.00 38.17 1.73
710 711 6.271391 TGACCTTGGAAACTGTTCTAGGATTA 59.729 38.462 13.75 1.52 38.17 1.75
711 712 5.073144 TGACCTTGGAAACTGTTCTAGGATT 59.927 40.000 13.75 0.00 38.17 3.01
713 714 3.971305 TGACCTTGGAAACTGTTCTAGGA 59.029 43.478 13.75 0.00 38.17 2.94
714 715 4.351874 TGACCTTGGAAACTGTTCTAGG 57.648 45.455 7.74 7.74 39.47 3.02
715 716 5.823045 AGTTTGACCTTGGAAACTGTTCTAG 59.177 40.000 5.91 0.00 40.19 2.43
716 717 5.751586 AGTTTGACCTTGGAAACTGTTCTA 58.248 37.500 5.91 0.00 40.19 2.10
717 718 4.600062 AGTTTGACCTTGGAAACTGTTCT 58.400 39.130 5.91 0.00 40.19 3.01
718 719 4.983671 AGTTTGACCTTGGAAACTGTTC 57.016 40.909 5.91 0.00 40.19 3.18
719 720 5.016831 AGAAGTTTGACCTTGGAAACTGTT 58.983 37.500 7.09 0.00 40.68 3.16
720 721 4.600062 AGAAGTTTGACCTTGGAAACTGT 58.400 39.130 7.09 0.60 40.68 3.55
723 724 5.470437 CCTCTAGAAGTTTGACCTTGGAAAC 59.530 44.000 0.00 0.00 33.11 2.78
725 726 4.658901 ACCTCTAGAAGTTTGACCTTGGAA 59.341 41.667 0.00 0.00 0.00 3.53
727 728 4.570930 GACCTCTAGAAGTTTGACCTTGG 58.429 47.826 0.00 0.00 0.00 3.61
728 729 4.238514 CGACCTCTAGAAGTTTGACCTTG 58.761 47.826 0.00 0.00 0.00 3.61
729 730 3.896272 ACGACCTCTAGAAGTTTGACCTT 59.104 43.478 0.00 0.00 0.00 3.50
730 731 3.498334 ACGACCTCTAGAAGTTTGACCT 58.502 45.455 0.00 0.00 0.00 3.85
731 732 3.938289 ACGACCTCTAGAAGTTTGACC 57.062 47.619 0.00 0.00 0.00 4.02
732 733 4.868067 TCAACGACCTCTAGAAGTTTGAC 58.132 43.478 5.01 0.00 0.00 3.18
733 734 4.583489 ACTCAACGACCTCTAGAAGTTTGA 59.417 41.667 7.89 7.89 0.00 2.69
734 735 4.872664 ACTCAACGACCTCTAGAAGTTTG 58.127 43.478 0.00 0.00 0.00 2.93
735 736 4.022155 GGACTCAACGACCTCTAGAAGTTT 60.022 45.833 0.00 0.00 0.00 2.66
736 737 3.506844 GGACTCAACGACCTCTAGAAGTT 59.493 47.826 0.00 0.00 0.00 2.66
737 738 3.083293 GGACTCAACGACCTCTAGAAGT 58.917 50.000 0.00 0.00 0.00 3.01
738 739 3.082548 TGGACTCAACGACCTCTAGAAG 58.917 50.000 0.00 0.00 0.00 2.85
763 764 7.556635 ACAGGCCAACTTTCTATTATTACCTTC 59.443 37.037 5.01 0.00 0.00 3.46
882 885 7.118088 GGCTCGTCGAAATATAGAAAAGTTTC 58.882 38.462 0.00 0.00 37.45 2.78
1205 3004 1.308783 GGCCTCGGAAAGCTTCTTGG 61.309 60.000 0.00 0.00 0.00 3.61
1218 3017 2.028125 ATCCACGGTACATGGCCTCG 62.028 60.000 3.32 0.00 44.02 4.63
1283 3082 4.060205 GTTGCTAACCTCGTTGAAACCTA 58.940 43.478 0.00 0.00 0.00 3.08
1333 3138 1.301401 TTGTCCGAGAACGCTTGGG 60.301 57.895 0.00 0.00 44.64 4.12
1849 3695 9.788960 GATAGAACAATTAAGAAAATCGGCTTT 57.211 29.630 0.00 0.00 0.00 3.51
1866 3712 8.762645 ACCTCAACTCATCATAAGATAGAACAA 58.237 33.333 0.00 0.00 31.88 2.83
2035 3881 6.675728 GCCAAAACTGAATATCGAGTTTCCTC 60.676 42.308 10.82 0.00 40.68 3.71
2072 3918 2.981859 ACGTATCTTAGCCCCTTGTG 57.018 50.000 0.00 0.00 0.00 3.33
2137 3986 0.967380 CCACTGGATGGCCTTGTTCC 60.967 60.000 3.32 5.97 43.24 3.62
2211 4060 6.208204 ACTTGGTGATTCCTTCTTCATTGAAG 59.792 38.462 18.49 18.49 42.10 3.02
2237 4086 5.263599 TGATAGAAGTTGCCCAAATGTCAT 58.736 37.500 0.00 0.00 0.00 3.06
2270 4119 5.063564 GCATAAAGTCTTGTTCCGGTCTAAG 59.936 44.000 0.00 4.68 0.00 2.18
2278 4127 9.294030 CATGAAATTAGCATAAAGTCTTGTTCC 57.706 33.333 0.00 0.00 0.00 3.62
2364 4213 1.765904 TGGCACTACCTTCAAGTGTGA 59.234 47.619 5.25 0.00 45.01 3.58
2451 4301 8.565896 TGTCATGCATAGAAAAAGATACAACT 57.434 30.769 0.00 0.00 0.00 3.16
2533 4384 8.262715 TGAGATTCGCAATACATTTAGTTCAA 57.737 30.769 0.00 0.00 0.00 2.69
2579 4430 7.236529 ACAAGTATATCCGGACAGAGGTAATA 58.763 38.462 6.12 0.00 0.00 0.98
2634 4485 5.647589 CTCAAACGGATGTAGCTACAACTA 58.352 41.667 29.26 7.40 39.99 2.24
2643 4494 1.990799 TGTCGCTCAAACGGATGTAG 58.009 50.000 0.00 0.00 0.00 2.74
2650 4501 4.326205 CAGAAATACATGTCGCTCAAACG 58.674 43.478 0.00 0.00 0.00 3.60
2663 4514 2.262637 ACTTCCCCGTCCAGAAATACA 58.737 47.619 0.00 0.00 0.00 2.29
2670 4521 1.971357 AGCATATACTTCCCCGTCCAG 59.029 52.381 0.00 0.00 0.00 3.86
2671 4522 2.097110 AGCATATACTTCCCCGTCCA 57.903 50.000 0.00 0.00 0.00 4.02
2676 4527 7.624549 TGATCTGATAAAGCATATACTTCCCC 58.375 38.462 0.00 0.00 0.00 4.81
2683 4534 9.494271 GGACTGTTTGATCTGATAAAGCATATA 57.506 33.333 4.93 0.00 0.00 0.86
2684 4535 7.994911 TGGACTGTTTGATCTGATAAAGCATAT 59.005 33.333 4.93 0.00 0.00 1.78
2714 4565 7.044380 CGATGTTATTCGCTATCTAAGATGAGC 60.044 40.741 0.00 0.00 31.60 4.26
2728 4579 3.000322 CCACTTCAGACGATGTTATTCGC 60.000 47.826 0.00 0.00 42.82 4.70
2740 4591 2.086054 CAGGTAGTGCCACTTCAGAC 57.914 55.000 1.02 0.00 40.61 3.51
2760 4611 1.134818 TGCATTACTGAGTGGCGGTAG 60.135 52.381 0.00 0.00 39.43 3.18
2802 4653 2.885616 TCGGAACAGAGGGAGTAGTTT 58.114 47.619 0.00 0.00 0.00 2.66
2857 4708 9.301153 GTGTTTGTTCACTTATTTTCAGTTCAT 57.699 29.630 0.00 0.00 35.68 2.57
2868 4719 5.802956 CGTTTTGGTGTGTTTGTTCACTTAT 59.197 36.000 0.00 0.00 38.90 1.73
2869 4720 5.154932 CGTTTTGGTGTGTTTGTTCACTTA 58.845 37.500 0.00 0.00 38.90 2.24
2870 4721 3.984633 CGTTTTGGTGTGTTTGTTCACTT 59.015 39.130 0.00 0.00 38.90 3.16
2902 4753 9.846248 ATTTTCTAACTTTTTCTGAATCGGATG 57.154 29.630 0.00 0.00 0.00 3.51
2935 4786 8.193250 TGTTTGTTTACTTCTCTGTTCACTAC 57.807 34.615 0.00 0.00 0.00 2.73
2974 4826 6.610075 TGCTAGACTATTATGCCATGATGA 57.390 37.500 0.00 0.00 0.00 2.92
3038 4890 8.700973 TGGAGTTGCACATATATAGAGTTGTTA 58.299 33.333 0.00 0.00 0.00 2.41
3086 4938 3.369997 GGATGGTTCTGGGACTTCTCTTC 60.370 52.174 0.00 0.00 0.00 2.87
3150 5002 7.012894 GGCACTATACTATAATGCACAAAACCA 59.987 37.037 10.78 0.00 38.05 3.67
3178 5030 6.523201 CGTTGAACTTAATTTATCCTGTGTGC 59.477 38.462 0.00 0.00 0.00 4.57
3197 5049 3.706698 CTGATTCCTCGCTATCGTTGAA 58.293 45.455 0.00 0.00 36.96 2.69
3241 5093 5.271625 AGTATCGATGTGACGTTGTGATAC 58.728 41.667 8.54 13.37 37.84 2.24
3281 5133 8.947115 GTTTGAGGCTGTATTTGTCTAACTAAT 58.053 33.333 0.00 0.00 0.00 1.73
3286 5138 6.714810 ACATGTTTGAGGCTGTATTTGTCTAA 59.285 34.615 0.00 0.00 0.00 2.10
3328 5180 0.937304 CACAAGTTCACGACCACCAG 59.063 55.000 0.00 0.00 0.00 4.00
3329 5181 0.537653 TCACAAGTTCACGACCACCA 59.462 50.000 0.00 0.00 0.00 4.17
3330 5182 1.531149 CATCACAAGTTCACGACCACC 59.469 52.381 0.00 0.00 0.00 4.61
3332 5184 1.140052 ACCATCACAAGTTCACGACCA 59.860 47.619 0.00 0.00 0.00 4.02
3333 5185 1.531149 CACCATCACAAGTTCACGACC 59.469 52.381 0.00 0.00 0.00 4.79
3335 5187 2.900716 TCACCATCACAAGTTCACGA 57.099 45.000 0.00 0.00 0.00 4.35
3336 5188 2.413239 GCATCACCATCACAAGTTCACG 60.413 50.000 0.00 0.00 0.00 4.35
3339 5191 4.256920 AGTAGCATCACCATCACAAGTTC 58.743 43.478 0.00 0.00 0.00 3.01
3340 5192 4.292186 AGTAGCATCACCATCACAAGTT 57.708 40.909 0.00 0.00 0.00 2.66
3343 5195 6.539826 CAGATTAAGTAGCATCACCATCACAA 59.460 38.462 0.00 0.00 0.00 3.33
3344 5196 6.051074 CAGATTAAGTAGCATCACCATCACA 58.949 40.000 0.00 0.00 0.00 3.58
3345 5197 5.049818 GCAGATTAAGTAGCATCACCATCAC 60.050 44.000 0.00 0.00 0.00 3.06
3347 5199 5.303971 AGCAGATTAAGTAGCATCACCATC 58.696 41.667 0.00 0.00 0.00 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.