Multiple sequence alignment - TraesCS2B01G025800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G025800 chr2B 100.000 2381 0 0 1 2381 11907917 11905537 0.000000e+00 4397.0
1 TraesCS2B01G025800 chr2B 80.397 1510 256 24 807 2297 11389556 11391044 0.000000e+00 1112.0
2 TraesCS2B01G025800 chr2B 79.949 1561 264 27 794 2315 11454244 11452694 0.000000e+00 1103.0
3 TraesCS2B01G025800 chr2B 78.978 1565 275 30 794 2315 12966413 12967966 0.000000e+00 1018.0
4 TraesCS2B01G025800 chr2B 100.000 484 0 0 2732 3215 11905186 11904703 0.000000e+00 894.0
5 TraesCS2B01G025800 chr2D 95.389 1670 72 3 715 2380 9008647 9010315 0.000000e+00 2652.0
6 TraesCS2B01G025800 chr2D 83.279 1531 233 17 795 2313 8670673 8672192 0.000000e+00 1387.0
7 TraesCS2B01G025800 chr2D 86.585 164 12 5 3056 3215 9010619 9010776 4.260000e-39 172.0
8 TraesCS2B01G025800 chr2A 93.750 1744 88 12 654 2381 8412957 8414695 0.000000e+00 2597.0
9 TraesCS2B01G025800 chr2A 95.336 1115 49 3 1269 2381 8034405 8033292 0.000000e+00 1768.0
10 TraesCS2B01G025800 chr2A 80.159 1507 265 22 788 2280 7741594 7743080 0.000000e+00 1096.0
11 TraesCS2B01G025800 chr2A 79.882 1531 273 26 782 2290 8627396 8628913 0.000000e+00 1088.0
12 TraesCS2B01G025800 chr2A 79.584 1538 245 36 810 2316 9944092 9945591 0.000000e+00 1037.0
13 TraesCS2B01G025800 chr2A 79.472 1515 258 33 792 2282 9111136 9109651 0.000000e+00 1026.0
14 TraesCS2B01G025800 chr2A 78.345 1547 274 39 794 2316 9982935 9984444 0.000000e+00 944.0
15 TraesCS2B01G025800 chr2A 91.411 489 32 6 2735 3215 8027292 8026806 0.000000e+00 662.0
16 TraesCS2B01G025800 chr2A 89.709 447 32 10 2778 3215 8033099 8032658 2.800000e-155 558.0
17 TraesCS2B01G025800 chr2A 96.491 114 4 0 386 499 412471535 412471648 4.230000e-44 189.0
18 TraesCS2B01G025800 chr3D 96.608 1533 51 1 849 2381 564053628 564055159 0.000000e+00 2542.0
19 TraesCS2B01G025800 chr3D 91.446 491 35 4 2732 3215 564055226 564055716 0.000000e+00 667.0
20 TraesCS2B01G025800 chrUn 96.230 1114 41 1 1269 2381 335085453 335086566 0.000000e+00 1823.0
21 TraesCS2B01G025800 chrUn 96.230 1114 41 1 1269 2381 416897230 416896117 0.000000e+00 1823.0
22 TraesCS2B01G025800 chrUn 99.091 110 1 0 390 499 77508703 77508812 7.040000e-47 198.0
23 TraesCS2B01G025800 chr3B 92.926 311 20 2 91 400 232562769 232562460 4.890000e-123 451.0
24 TraesCS2B01G025800 chr3B 98.077 156 2 1 498 653 232562468 232562314 1.470000e-68 270.0
25 TraesCS2B01G025800 chr3B 97.273 110 3 0 393 502 64500383 64500274 1.520000e-43 187.0
26 TraesCS2B01G025800 chr3B 100.000 85 0 0 1 85 232565070 232564986 1.190000e-34 158.0
27 TraesCS2B01G025800 chr5A 92.405 237 15 3 92 327 570229076 570229310 5.140000e-88 335.0
28 TraesCS2B01G025800 chr5A 92.949 156 9 2 498 653 570232301 570232454 3.230000e-55 226.0
29 TraesCS2B01G025800 chr5A 93.333 90 5 1 1 89 570226748 570226837 7.240000e-27 132.0
30 TraesCS2B01G025800 chr5A 90.000 60 6 0 2974 3033 555174514 555174455 9.560000e-11 78.7
31 TraesCS2B01G025800 chr6B 98.214 112 2 0 389 500 214085045 214085156 2.530000e-46 196.0
32 TraesCS2B01G025800 chr7B 97.368 114 3 0 386 499 513956135 513956248 9.100000e-46 195.0
33 TraesCS2B01G025800 chr3A 96.522 115 4 0 386 500 707385854 707385968 1.180000e-44 191.0
34 TraesCS2B01G025800 chr1B 96.491 114 4 0 386 499 386204479 386204592 4.230000e-44 189.0
35 TraesCS2B01G025800 chr7A 94.309 123 5 2 383 503 513215704 513215582 1.520000e-43 187.0
36 TraesCS2B01G025800 chr4B 93.651 126 5 3 392 515 482619939 482619815 5.480000e-43 185.0
37 TraesCS2B01G025800 chr5B 94.828 58 3 0 2973 3030 436151638 436151695 1.230000e-14 91.6
38 TraesCS2B01G025800 chr7D 87.879 66 7 1 2975 3040 54241307 54241243 3.440000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G025800 chr2B 11904703 11907917 3214 True 2645.5 4397 100.000000 1 3215 2 chr2B.!!$R2 3214
1 TraesCS2B01G025800 chr2B 11389556 11391044 1488 False 1112.0 1112 80.397000 807 2297 1 chr2B.!!$F1 1490
2 TraesCS2B01G025800 chr2B 11452694 11454244 1550 True 1103.0 1103 79.949000 794 2315 1 chr2B.!!$R1 1521
3 TraesCS2B01G025800 chr2B 12966413 12967966 1553 False 1018.0 1018 78.978000 794 2315 1 chr2B.!!$F2 1521
4 TraesCS2B01G025800 chr2D 9008647 9010776 2129 False 1412.0 2652 90.987000 715 3215 2 chr2D.!!$F2 2500
5 TraesCS2B01G025800 chr2D 8670673 8672192 1519 False 1387.0 1387 83.279000 795 2313 1 chr2D.!!$F1 1518
6 TraesCS2B01G025800 chr2A 8412957 8414695 1738 False 2597.0 2597 93.750000 654 2381 1 chr2A.!!$F2 1727
7 TraesCS2B01G025800 chr2A 8032658 8034405 1747 True 1163.0 1768 92.522500 1269 3215 2 chr2A.!!$R3 1946
8 TraesCS2B01G025800 chr2A 7741594 7743080 1486 False 1096.0 1096 80.159000 788 2280 1 chr2A.!!$F1 1492
9 TraesCS2B01G025800 chr2A 8627396 8628913 1517 False 1088.0 1088 79.882000 782 2290 1 chr2A.!!$F3 1508
10 TraesCS2B01G025800 chr2A 9944092 9945591 1499 False 1037.0 1037 79.584000 810 2316 1 chr2A.!!$F4 1506
11 TraesCS2B01G025800 chr2A 9109651 9111136 1485 True 1026.0 1026 79.472000 792 2282 1 chr2A.!!$R2 1490
12 TraesCS2B01G025800 chr2A 9982935 9984444 1509 False 944.0 944 78.345000 794 2316 1 chr2A.!!$F5 1522
13 TraesCS2B01G025800 chr3D 564053628 564055716 2088 False 1604.5 2542 94.027000 849 3215 2 chr3D.!!$F1 2366
14 TraesCS2B01G025800 chrUn 335085453 335086566 1113 False 1823.0 1823 96.230000 1269 2381 1 chrUn.!!$F2 1112
15 TraesCS2B01G025800 chrUn 416896117 416897230 1113 True 1823.0 1823 96.230000 1269 2381 1 chrUn.!!$R1 1112
16 TraesCS2B01G025800 chr3B 232562314 232565070 2756 True 293.0 451 97.001000 1 653 3 chr3B.!!$R2 652
17 TraesCS2B01G025800 chr5A 570226748 570232454 5706 False 231.0 335 92.895667 1 653 3 chr5A.!!$F1 652

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
614 615 0.039074 CGCCAGGACGGATGAGATAC 60.039 60.0 0.00 0.00 36.56 2.24 F
944 1269 0.179018 AGGTTGCAACACCTCCTGAC 60.179 55.0 29.55 9.95 44.63 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2154 6514 1.856920 GGGGGTATCCTTGATTCCCAA 59.143 52.381 17.35 0.0 47.0 4.12 R
2908 7951 1.091771 CCCGATGCACATGGTCACTC 61.092 60.000 0.00 0.0 0.0 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
85 86 0.395586 TGCCATGGGAGGTACATTGC 60.396 55.000 15.13 0.00 37.46 3.56
86 87 0.395586 GCCATGGGAGGTACATTGCA 60.396 55.000 15.13 0.00 37.07 4.08
88 89 1.064463 CCATGGGAGGTACATTGCAGT 60.064 52.381 2.85 0.00 0.00 4.40
90 91 3.371487 CCATGGGAGGTACATTGCAGTTA 60.371 47.826 2.85 0.00 0.00 2.24
91 92 3.343941 TGGGAGGTACATTGCAGTTAC 57.656 47.619 0.00 0.00 0.00 2.50
92 93 2.640332 TGGGAGGTACATTGCAGTTACA 59.360 45.455 0.00 0.00 0.00 2.41
94 95 3.307480 GGGAGGTACATTGCAGTTACAGT 60.307 47.826 0.00 0.00 0.00 3.55
95 96 4.081309 GGGAGGTACATTGCAGTTACAGTA 60.081 45.833 0.00 0.00 0.00 2.74
96 97 5.396436 GGGAGGTACATTGCAGTTACAGTAT 60.396 44.000 0.00 0.00 0.00 2.12
98 99 6.598064 GGAGGTACATTGCAGTTACAGTATTT 59.402 38.462 0.00 0.00 0.00 1.40
99 100 7.377766 AGGTACATTGCAGTTACAGTATTTG 57.622 36.000 0.00 0.00 0.00 2.32
100 101 6.374333 AGGTACATTGCAGTTACAGTATTTGG 59.626 38.462 0.00 0.00 0.00 3.28
101 102 6.373216 GGTACATTGCAGTTACAGTATTTGGA 59.627 38.462 0.00 0.00 0.00 3.53
102 103 6.892658 ACATTGCAGTTACAGTATTTGGAA 57.107 33.333 0.00 2.59 0.00 3.53
112 113 5.376854 ACAGTATTTGGAACAGATTGTGC 57.623 39.130 0.00 0.00 42.39 4.57
113 114 4.083324 ACAGTATTTGGAACAGATTGTGCG 60.083 41.667 0.00 0.00 42.39 5.34
114 115 4.072131 AGTATTTGGAACAGATTGTGCGT 58.928 39.130 0.00 0.00 42.39 5.24
115 116 2.772568 TTTGGAACAGATTGTGCGTG 57.227 45.000 0.00 0.00 42.39 5.34
116 117 1.960417 TTGGAACAGATTGTGCGTGA 58.040 45.000 0.00 0.00 42.39 4.35
117 118 1.225855 TGGAACAGATTGTGCGTGAC 58.774 50.000 0.00 0.00 0.00 3.67
118 119 1.225855 GGAACAGATTGTGCGTGACA 58.774 50.000 0.00 0.00 0.00 3.58
119 120 1.195448 GGAACAGATTGTGCGTGACAG 59.805 52.381 0.00 0.00 35.44 3.51
120 121 1.867233 GAACAGATTGTGCGTGACAGT 59.133 47.619 0.00 0.00 35.44 3.55
121 122 2.812358 ACAGATTGTGCGTGACAGTA 57.188 45.000 0.00 0.00 35.44 2.74
122 123 3.319137 ACAGATTGTGCGTGACAGTAT 57.681 42.857 0.00 0.00 35.44 2.12
123 124 3.664107 ACAGATTGTGCGTGACAGTATT 58.336 40.909 0.00 0.00 35.44 1.89
124 125 3.433274 ACAGATTGTGCGTGACAGTATTG 59.567 43.478 0.00 0.00 35.44 1.90
125 126 2.416547 AGATTGTGCGTGACAGTATTGC 59.583 45.455 0.00 0.00 35.44 3.56
126 127 1.587547 TTGTGCGTGACAGTATTGCA 58.412 45.000 0.00 0.00 35.44 4.08
127 128 1.147473 TGTGCGTGACAGTATTGCAG 58.853 50.000 0.00 0.00 36.03 4.41
128 129 1.148310 GTGCGTGACAGTATTGCAGT 58.852 50.000 0.00 0.00 36.03 4.40
129 130 1.531149 GTGCGTGACAGTATTGCAGTT 59.469 47.619 0.00 0.00 36.03 3.16
130 131 2.734606 GTGCGTGACAGTATTGCAGTTA 59.265 45.455 0.00 0.00 36.03 2.24
131 132 3.185594 GTGCGTGACAGTATTGCAGTTAA 59.814 43.478 0.00 0.00 36.03 2.01
132 133 3.185594 TGCGTGACAGTATTGCAGTTAAC 59.814 43.478 0.00 0.00 0.00 2.01
133 134 3.424433 GCGTGACAGTATTGCAGTTAACC 60.424 47.826 0.88 0.00 0.00 2.85
134 135 3.994392 CGTGACAGTATTGCAGTTAACCT 59.006 43.478 0.88 0.00 0.00 3.50
135 136 4.091509 CGTGACAGTATTGCAGTTAACCTC 59.908 45.833 0.88 0.00 0.00 3.85
136 137 5.238583 GTGACAGTATTGCAGTTAACCTCT 58.761 41.667 0.88 0.00 0.00 3.69
137 138 5.701290 GTGACAGTATTGCAGTTAACCTCTT 59.299 40.000 0.88 0.00 0.00 2.85
138 139 5.700832 TGACAGTATTGCAGTTAACCTCTTG 59.299 40.000 0.88 0.00 0.00 3.02
139 140 5.865085 ACAGTATTGCAGTTAACCTCTTGA 58.135 37.500 0.88 0.00 0.00 3.02
140 141 6.476378 ACAGTATTGCAGTTAACCTCTTGAT 58.524 36.000 0.88 0.00 0.00 2.57
141 142 6.942576 ACAGTATTGCAGTTAACCTCTTGATT 59.057 34.615 0.88 0.00 0.00 2.57
142 143 7.448469 ACAGTATTGCAGTTAACCTCTTGATTT 59.552 33.333 0.88 0.00 0.00 2.17
143 144 7.752239 CAGTATTGCAGTTAACCTCTTGATTTG 59.248 37.037 0.88 0.00 0.00 2.32
144 145 6.655078 ATTGCAGTTAACCTCTTGATTTGT 57.345 33.333 0.88 0.00 0.00 2.83
145 146 6.463995 TTGCAGTTAACCTCTTGATTTGTT 57.536 33.333 0.88 0.00 0.00 2.83
146 147 6.072112 TGCAGTTAACCTCTTGATTTGTTC 57.928 37.500 0.88 0.00 0.00 3.18
147 148 5.827797 TGCAGTTAACCTCTTGATTTGTTCT 59.172 36.000 0.88 0.00 0.00 3.01
148 149 6.995686 TGCAGTTAACCTCTTGATTTGTTCTA 59.004 34.615 0.88 0.00 0.00 2.10
149 150 7.500892 TGCAGTTAACCTCTTGATTTGTTCTAA 59.499 33.333 0.88 0.00 0.00 2.10
150 151 8.515414 GCAGTTAACCTCTTGATTTGTTCTAAT 58.485 33.333 0.88 0.00 0.00 1.73
177 178 8.999220 AAAAACAAACCTCAATTAAACGGTAA 57.001 26.923 0.00 0.00 0.00 2.85
178 179 8.999220 AAAACAAACCTCAATTAAACGGTAAA 57.001 26.923 0.00 0.00 0.00 2.01
179 180 7.990541 AACAAACCTCAATTAAACGGTAAAC 57.009 32.000 0.00 0.00 0.00 2.01
180 181 7.337480 ACAAACCTCAATTAAACGGTAAACT 57.663 32.000 0.00 0.00 0.00 2.66
181 182 7.197703 ACAAACCTCAATTAAACGGTAAACTG 58.802 34.615 0.00 0.00 0.00 3.16
182 183 7.067251 ACAAACCTCAATTAAACGGTAAACTGA 59.933 33.333 0.00 0.00 0.00 3.41
183 184 7.571080 AACCTCAATTAAACGGTAAACTGAA 57.429 32.000 0.00 0.00 0.00 3.02
184 185 7.754851 ACCTCAATTAAACGGTAAACTGAAT 57.245 32.000 0.00 0.00 0.00 2.57
185 186 8.851541 ACCTCAATTAAACGGTAAACTGAATA 57.148 30.769 0.00 0.00 0.00 1.75
186 187 9.287373 ACCTCAATTAAACGGTAAACTGAATAA 57.713 29.630 0.00 0.00 0.00 1.40
194 195 8.905103 AAACGGTAAACTGAATAAATATGTGC 57.095 30.769 0.00 0.00 0.00 4.57
195 196 7.618502 ACGGTAAACTGAATAAATATGTGCA 57.381 32.000 0.00 0.00 0.00 4.57
196 197 7.693952 ACGGTAAACTGAATAAATATGTGCAG 58.306 34.615 0.00 0.00 0.00 4.41
197 198 7.335924 ACGGTAAACTGAATAAATATGTGCAGT 59.664 33.333 0.00 0.00 38.14 4.40
198 199 8.181573 CGGTAAACTGAATAAATATGTGCAGTT 58.818 33.333 0.00 0.00 45.36 3.16
204 205 8.604035 ACTGAATAAATATGTGCAGTTAGTTCG 58.396 33.333 0.00 0.00 33.19 3.95
205 206 8.487313 TGAATAAATATGTGCAGTTAGTTCGT 57.513 30.769 0.00 0.00 0.00 3.85
206 207 8.600625 TGAATAAATATGTGCAGTTAGTTCGTC 58.399 33.333 0.00 0.00 0.00 4.20
207 208 5.796350 AAATATGTGCAGTTAGTTCGTCC 57.204 39.130 0.00 0.00 0.00 4.79
208 209 2.831685 ATGTGCAGTTAGTTCGTCCA 57.168 45.000 0.00 0.00 0.00 4.02
209 210 2.831685 TGTGCAGTTAGTTCGTCCAT 57.168 45.000 0.00 0.00 0.00 3.41
210 211 2.412870 TGTGCAGTTAGTTCGTCCATG 58.587 47.619 0.00 0.00 0.00 3.66
211 212 1.732259 GTGCAGTTAGTTCGTCCATGG 59.268 52.381 4.97 4.97 0.00 3.66
212 213 1.346395 TGCAGTTAGTTCGTCCATGGT 59.654 47.619 12.58 0.00 0.00 3.55
213 214 2.000447 GCAGTTAGTTCGTCCATGGTC 59.000 52.381 12.58 5.07 0.00 4.02
214 215 2.611971 GCAGTTAGTTCGTCCATGGTCA 60.612 50.000 12.58 0.00 0.00 4.02
215 216 3.659786 CAGTTAGTTCGTCCATGGTCAA 58.340 45.455 12.58 0.00 0.00 3.18
216 217 4.253685 CAGTTAGTTCGTCCATGGTCAAT 58.746 43.478 12.58 0.00 0.00 2.57
217 218 4.093408 CAGTTAGTTCGTCCATGGTCAATG 59.907 45.833 12.58 0.00 35.89 2.82
218 219 1.453155 AGTTCGTCCATGGTCAATGC 58.547 50.000 12.58 0.00 34.67 3.56
219 220 1.003580 AGTTCGTCCATGGTCAATGCT 59.996 47.619 12.58 1.83 34.67 3.79
220 221 1.131126 GTTCGTCCATGGTCAATGCTG 59.869 52.381 12.58 0.00 34.67 4.41
221 222 0.392863 TCGTCCATGGTCAATGCTGG 60.393 55.000 12.58 0.00 34.67 4.85
222 223 1.378882 CGTCCATGGTCAATGCTGGG 61.379 60.000 12.58 0.00 34.67 4.45
223 224 1.380246 TCCATGGTCAATGCTGGGC 60.380 57.895 12.58 0.00 34.67 5.36
224 225 2.428925 CCATGGTCAATGCTGGGCC 61.429 63.158 2.57 0.00 34.67 5.80
225 226 1.683025 CATGGTCAATGCTGGGCCA 60.683 57.895 5.85 5.85 34.23 5.36
226 227 1.683365 ATGGTCAATGCTGGGCCAC 60.683 57.895 0.00 0.00 33.12 5.01
227 228 3.443045 GGTCAATGCTGGGCCACG 61.443 66.667 0.00 0.00 0.00 4.94
228 229 2.672996 GTCAATGCTGGGCCACGT 60.673 61.111 0.00 0.00 0.00 4.49
229 230 2.359850 TCAATGCTGGGCCACGTC 60.360 61.111 0.00 0.00 0.00 4.34
230 231 3.803082 CAATGCTGGGCCACGTCG 61.803 66.667 0.00 0.00 0.00 5.12
240 241 2.808315 CCACGTCGGCTGCTAGAT 59.192 61.111 0.00 0.00 0.00 1.98
241 242 1.589993 CCACGTCGGCTGCTAGATG 60.590 63.158 13.40 13.40 0.00 2.90
242 243 2.105128 ACGTCGGCTGCTAGATGC 59.895 61.111 14.42 0.00 43.25 3.91
252 253 3.071580 GCTAGATGCACTGGTGGAC 57.928 57.895 0.00 0.00 42.31 4.02
253 254 0.807667 GCTAGATGCACTGGTGGACG 60.808 60.000 0.00 0.00 42.31 4.79
254 255 0.532573 CTAGATGCACTGGTGGACGT 59.467 55.000 0.00 0.00 32.58 4.34
255 256 0.246360 TAGATGCACTGGTGGACGTG 59.754 55.000 0.00 0.00 32.58 4.49
256 257 2.032528 ATGCACTGGTGGACGTGG 59.967 61.111 0.00 0.00 32.58 4.94
257 258 4.927782 TGCACTGGTGGACGTGGC 62.928 66.667 0.00 0.00 0.00 5.01
258 259 4.626081 GCACTGGTGGACGTGGCT 62.626 66.667 0.00 0.00 0.00 4.75
259 260 2.357517 CACTGGTGGACGTGGCTC 60.358 66.667 0.00 0.00 0.00 4.70
260 261 2.524394 ACTGGTGGACGTGGCTCT 60.524 61.111 0.00 0.00 0.00 4.09
261 262 2.262915 CTGGTGGACGTGGCTCTC 59.737 66.667 0.00 0.00 0.00 3.20
262 263 3.302347 CTGGTGGACGTGGCTCTCC 62.302 68.421 0.00 0.00 0.00 3.71
263 264 4.436998 GGTGGACGTGGCTCTCCG 62.437 72.222 0.00 0.00 34.14 4.63
270 271 4.129737 GTGGCTCTCCGCACGCTA 62.130 66.667 0.00 0.00 42.42 4.26
271 272 4.129737 TGGCTCTCCGCACGCTAC 62.130 66.667 0.00 0.00 41.67 3.58
272 273 4.129737 GGCTCTCCGCACGCTACA 62.130 66.667 0.00 0.00 41.67 2.74
273 274 2.580867 GCTCTCCGCACGCTACAG 60.581 66.667 0.00 0.00 38.92 2.74
274 275 2.580867 CTCTCCGCACGCTACAGC 60.581 66.667 0.00 0.00 37.78 4.40
275 276 3.342370 CTCTCCGCACGCTACAGCA 62.342 63.158 1.61 0.00 42.21 4.41
276 277 3.181967 CTCCGCACGCTACAGCAC 61.182 66.667 1.61 0.00 42.21 4.40
277 278 3.914605 CTCCGCACGCTACAGCACA 62.915 63.158 1.61 0.00 42.21 4.57
278 279 2.815211 CCGCACGCTACAGCACAT 60.815 61.111 1.61 0.00 42.21 3.21
279 280 2.396861 CGCACGCTACAGCACATG 59.603 61.111 1.61 0.00 42.21 3.21
280 281 2.094066 CGCACGCTACAGCACATGA 61.094 57.895 0.00 0.00 42.21 3.07
281 282 1.423721 CGCACGCTACAGCACATGAT 61.424 55.000 0.00 0.00 42.21 2.45
282 283 0.729116 GCACGCTACAGCACATGATT 59.271 50.000 0.00 0.00 42.21 2.57
283 284 1.267732 GCACGCTACAGCACATGATTC 60.268 52.381 0.00 0.00 42.21 2.52
284 285 2.274437 CACGCTACAGCACATGATTCT 58.726 47.619 0.00 0.00 42.21 2.40
285 286 2.030091 CACGCTACAGCACATGATTCTG 59.970 50.000 0.00 5.91 42.21 3.02
286 287 1.004185 CGCTACAGCACATGATTCTGC 60.004 52.381 0.00 0.00 42.21 4.26
287 288 2.286872 GCTACAGCACATGATTCTGCT 58.713 47.619 0.00 0.18 44.82 4.24
288 289 3.461061 GCTACAGCACATGATTCTGCTA 58.539 45.455 8.10 0.00 41.97 3.49
289 290 3.493877 GCTACAGCACATGATTCTGCTAG 59.506 47.826 8.10 5.16 41.97 3.42
290 291 3.623906 ACAGCACATGATTCTGCTAGT 57.376 42.857 8.10 6.72 41.97 2.57
291 292 4.743057 ACAGCACATGATTCTGCTAGTA 57.257 40.909 8.10 0.00 41.97 1.82
292 293 4.437239 ACAGCACATGATTCTGCTAGTAC 58.563 43.478 8.10 0.00 41.97 2.73
293 294 3.488678 CAGCACATGATTCTGCTAGTACG 59.511 47.826 8.10 0.00 41.97 3.67
294 295 3.131223 AGCACATGATTCTGCTAGTACGT 59.869 43.478 6.75 0.00 42.07 3.57
295 296 3.243877 GCACATGATTCTGCTAGTACGTG 59.756 47.826 0.00 0.00 0.00 4.49
296 297 4.672409 CACATGATTCTGCTAGTACGTGA 58.328 43.478 0.00 0.00 0.00 4.35
297 298 4.500837 CACATGATTCTGCTAGTACGTGAC 59.499 45.833 0.00 0.00 0.00 3.67
298 299 4.157840 ACATGATTCTGCTAGTACGTGACA 59.842 41.667 0.00 0.00 0.00 3.58
299 300 4.357018 TGATTCTGCTAGTACGTGACAG 57.643 45.455 0.00 0.00 0.00 3.51
300 301 3.756963 TGATTCTGCTAGTACGTGACAGT 59.243 43.478 0.00 0.00 0.00 3.55
301 302 3.826236 TTCTGCTAGTACGTGACAGTC 57.174 47.619 0.00 0.00 0.00 3.51
302 303 3.055209 TCTGCTAGTACGTGACAGTCT 57.945 47.619 0.00 0.00 0.00 3.24
303 304 3.409570 TCTGCTAGTACGTGACAGTCTT 58.590 45.455 0.00 0.00 0.00 3.01
304 305 3.188667 TCTGCTAGTACGTGACAGTCTTG 59.811 47.826 0.00 0.00 0.00 3.02
305 306 2.228103 TGCTAGTACGTGACAGTCTTGG 59.772 50.000 0.00 0.00 0.00 3.61
306 307 2.864968 CTAGTACGTGACAGTCTTGGC 58.135 52.381 0.00 0.00 0.00 4.52
307 308 0.039437 AGTACGTGACAGTCTTGGCG 60.039 55.000 0.00 4.28 33.87 5.69
308 309 1.372499 TACGTGACAGTCTTGGCGC 60.372 57.895 0.00 0.00 39.55 6.53
309 310 1.802337 TACGTGACAGTCTTGGCGCT 61.802 55.000 7.64 0.00 40.82 5.92
310 311 2.661566 CGTGACAGTCTTGGCGCTG 61.662 63.158 7.64 0.00 40.82 5.18
311 312 2.031012 TGACAGTCTTGGCGCTGG 59.969 61.111 7.64 0.00 33.87 4.85
312 313 2.031163 GACAGTCTTGGCGCTGGT 59.969 61.111 7.64 0.00 37.07 4.00
313 314 1.292223 GACAGTCTTGGCGCTGGTA 59.708 57.895 7.64 0.00 37.07 3.25
314 315 1.004918 ACAGTCTTGGCGCTGGTAC 60.005 57.895 7.64 0.99 37.07 3.34
315 316 1.005037 CAGTCTTGGCGCTGGTACA 60.005 57.895 7.64 0.00 0.00 2.90
316 317 0.391661 CAGTCTTGGCGCTGGTACAT 60.392 55.000 7.64 0.00 38.20 2.29
317 318 0.391661 AGTCTTGGCGCTGGTACATG 60.392 55.000 7.64 0.00 38.20 3.21
318 319 1.745115 TCTTGGCGCTGGTACATGC 60.745 57.895 7.64 0.00 38.20 4.06
319 320 2.033294 TTGGCGCTGGTACATGCA 59.967 55.556 7.64 0.00 40.66 3.96
320 321 1.585267 CTTGGCGCTGGTACATGCAA 61.585 55.000 7.64 0.00 40.66 4.08
321 322 1.175347 TTGGCGCTGGTACATGCAAA 61.175 50.000 7.64 0.00 40.66 3.68
322 323 1.137404 GGCGCTGGTACATGCAAAG 59.863 57.895 7.64 0.00 40.66 2.77
323 324 1.305219 GGCGCTGGTACATGCAAAGA 61.305 55.000 7.64 0.00 40.66 2.52
324 325 0.521291 GCGCTGGTACATGCAAAGAA 59.479 50.000 0.00 0.00 39.07 2.52
325 326 1.068610 GCGCTGGTACATGCAAAGAAA 60.069 47.619 0.00 0.00 39.07 2.52
326 327 2.606795 GCGCTGGTACATGCAAAGAAAA 60.607 45.455 0.00 0.00 39.07 2.29
327 328 3.836949 CGCTGGTACATGCAAAGAAAAT 58.163 40.909 9.44 0.00 38.20 1.82
328 329 4.674101 GCGCTGGTACATGCAAAGAAAATA 60.674 41.667 0.00 0.00 39.07 1.40
329 330 4.793216 CGCTGGTACATGCAAAGAAAATAC 59.207 41.667 9.44 0.00 38.20 1.89
330 331 5.618863 CGCTGGTACATGCAAAGAAAATACA 60.619 40.000 9.44 0.00 38.20 2.29
331 332 5.801947 GCTGGTACATGCAAAGAAAATACAG 59.198 40.000 0.00 0.00 38.20 2.74
332 333 5.708948 TGGTACATGCAAAGAAAATACAGC 58.291 37.500 0.00 0.00 0.00 4.40
333 334 5.102313 GGTACATGCAAAGAAAATACAGCC 58.898 41.667 0.00 0.00 0.00 4.85
334 335 4.192429 ACATGCAAAGAAAATACAGCCC 57.808 40.909 0.00 0.00 0.00 5.19
335 336 3.577848 ACATGCAAAGAAAATACAGCCCA 59.422 39.130 0.00 0.00 0.00 5.36
336 337 4.223477 ACATGCAAAGAAAATACAGCCCAT 59.777 37.500 0.00 0.00 0.00 4.00
337 338 4.454728 TGCAAAGAAAATACAGCCCATC 57.545 40.909 0.00 0.00 0.00 3.51
338 339 3.831333 TGCAAAGAAAATACAGCCCATCA 59.169 39.130 0.00 0.00 0.00 3.07
339 340 4.082081 TGCAAAGAAAATACAGCCCATCAG 60.082 41.667 0.00 0.00 0.00 2.90
340 341 4.082026 GCAAAGAAAATACAGCCCATCAGT 60.082 41.667 0.00 0.00 0.00 3.41
341 342 5.404946 CAAAGAAAATACAGCCCATCAGTG 58.595 41.667 0.00 0.00 0.00 3.66
342 343 4.307032 AGAAAATACAGCCCATCAGTGT 57.693 40.909 0.00 0.00 0.00 3.55
343 344 5.435686 AGAAAATACAGCCCATCAGTGTA 57.564 39.130 0.00 0.00 0.00 2.90
344 345 5.186198 AGAAAATACAGCCCATCAGTGTAC 58.814 41.667 0.00 0.00 29.67 2.90
345 346 4.844349 AAATACAGCCCATCAGTGTACT 57.156 40.909 0.00 0.00 29.67 2.73
346 347 5.950544 AAATACAGCCCATCAGTGTACTA 57.049 39.130 0.00 0.00 29.67 1.82
347 348 5.537300 AATACAGCCCATCAGTGTACTAG 57.463 43.478 0.00 0.00 29.67 2.57
348 349 2.821437 ACAGCCCATCAGTGTACTAGT 58.179 47.619 0.00 0.00 0.00 2.57
349 350 2.497675 ACAGCCCATCAGTGTACTAGTG 59.502 50.000 5.39 0.00 0.00 2.74
350 351 1.482593 AGCCCATCAGTGTACTAGTGC 59.517 52.381 5.39 4.49 0.00 4.40
351 352 1.802880 GCCCATCAGTGTACTAGTGCG 60.803 57.143 5.39 0.00 0.00 5.34
352 353 1.202417 CCCATCAGTGTACTAGTGCGG 60.202 57.143 5.39 0.00 0.00 5.69
353 354 1.749063 CCATCAGTGTACTAGTGCGGA 59.251 52.381 5.39 4.00 0.00 5.54
354 355 2.223595 CCATCAGTGTACTAGTGCGGAG 60.224 54.545 5.39 0.00 0.00 4.63
355 356 2.484742 TCAGTGTACTAGTGCGGAGA 57.515 50.000 5.39 0.27 0.00 3.71
356 357 3.000684 TCAGTGTACTAGTGCGGAGAT 57.999 47.619 5.39 0.00 0.00 2.75
357 358 2.683362 TCAGTGTACTAGTGCGGAGATG 59.317 50.000 5.39 0.42 0.00 2.90
358 359 1.405821 AGTGTACTAGTGCGGAGATGC 59.594 52.381 5.39 0.00 0.00 3.91
359 360 1.405821 GTGTACTAGTGCGGAGATGCT 59.594 52.381 5.39 0.00 35.36 3.79
360 361 1.405463 TGTACTAGTGCGGAGATGCTG 59.595 52.381 5.39 0.00 35.36 4.41
361 362 1.405821 GTACTAGTGCGGAGATGCTGT 59.594 52.381 5.39 0.00 35.36 4.40
362 363 0.174389 ACTAGTGCGGAGATGCTGTG 59.826 55.000 0.00 0.00 35.36 3.66
363 364 1.150567 CTAGTGCGGAGATGCTGTGC 61.151 60.000 0.00 0.00 35.36 4.57
364 365 2.889154 TAGTGCGGAGATGCTGTGCG 62.889 60.000 0.00 0.00 35.36 5.34
369 370 4.783621 GAGATGCTGTGCGGCCCA 62.784 66.667 0.00 0.00 0.00 5.36
370 371 4.119363 AGATGCTGTGCGGCCCAT 62.119 61.111 0.00 0.00 0.00 4.00
371 372 3.896133 GATGCTGTGCGGCCCATG 61.896 66.667 0.00 0.00 0.00 3.66
372 373 4.746309 ATGCTGTGCGGCCCATGT 62.746 61.111 0.00 0.00 0.00 3.21
375 376 3.129502 CTGTGCGGCCCATGTCAG 61.130 66.667 0.00 0.00 0.00 3.51
376 377 3.610619 CTGTGCGGCCCATGTCAGA 62.611 63.158 0.00 0.00 0.00 3.27
377 378 2.821366 GTGCGGCCCATGTCAGAG 60.821 66.667 0.00 0.00 0.00 3.35
378 379 4.100084 TGCGGCCCATGTCAGAGG 62.100 66.667 0.00 0.00 0.00 3.69
382 383 2.821366 GCCCATGTCAGAGGCGTG 60.821 66.667 0.41 0.00 36.84 5.34
383 384 2.821366 CCCATGTCAGAGGCGTGC 60.821 66.667 0.00 0.00 0.00 5.34
384 385 2.821366 CCATGTCAGAGGCGTGCC 60.821 66.667 1.67 1.67 0.00 5.01
385 386 2.046988 CATGTCAGAGGCGTGCCA 60.047 61.111 14.29 0.00 38.92 4.92
386 387 2.046892 ATGTCAGAGGCGTGCCAC 60.047 61.111 14.29 6.96 38.92 5.01
387 388 2.882677 ATGTCAGAGGCGTGCCACA 61.883 57.895 14.29 8.89 38.92 4.17
388 389 2.740055 GTCAGAGGCGTGCCACAG 60.740 66.667 14.29 3.88 38.92 3.66
389 390 2.917227 TCAGAGGCGTGCCACAGA 60.917 61.111 14.29 6.48 38.92 3.41
390 391 2.740055 CAGAGGCGTGCCACAGAC 60.740 66.667 14.29 0.00 38.92 3.51
391 392 4.008933 AGAGGCGTGCCACAGACC 62.009 66.667 14.29 0.00 38.92 3.85
392 393 4.008933 GAGGCGTGCCACAGACCT 62.009 66.667 14.29 1.00 38.92 3.85
393 394 2.603473 AGGCGTGCCACAGACCTA 60.603 61.111 14.29 0.00 38.92 3.08
394 395 2.434359 GGCGTGCCACAGACCTAC 60.434 66.667 5.89 0.00 35.81 3.18
395 396 2.657237 GCGTGCCACAGACCTACT 59.343 61.111 0.00 0.00 0.00 2.57
396 397 1.446272 GCGTGCCACAGACCTACTC 60.446 63.158 0.00 0.00 0.00 2.59
397 398 1.215647 CGTGCCACAGACCTACTCC 59.784 63.158 0.00 0.00 0.00 3.85
398 399 1.597461 GTGCCACAGACCTACTCCC 59.403 63.158 0.00 0.00 0.00 4.30
399 400 0.905337 GTGCCACAGACCTACTCCCT 60.905 60.000 0.00 0.00 0.00 4.20
400 401 0.614979 TGCCACAGACCTACTCCCTC 60.615 60.000 0.00 0.00 0.00 4.30
401 402 1.331399 GCCACAGACCTACTCCCTCC 61.331 65.000 0.00 0.00 0.00 4.30
402 403 1.038130 CCACAGACCTACTCCCTCCG 61.038 65.000 0.00 0.00 0.00 4.63
403 404 0.323542 CACAGACCTACTCCCTCCGT 60.324 60.000 0.00 0.00 0.00 4.69
404 405 0.408700 ACAGACCTACTCCCTCCGTT 59.591 55.000 0.00 0.00 0.00 4.44
405 406 1.104630 CAGACCTACTCCCTCCGTTC 58.895 60.000 0.00 0.00 0.00 3.95
406 407 0.394080 AGACCTACTCCCTCCGTTCG 60.394 60.000 0.00 0.00 0.00 3.95
407 408 1.379576 ACCTACTCCCTCCGTTCGG 60.380 63.158 4.74 4.74 0.00 4.30
408 409 1.077212 CCTACTCCCTCCGTTCGGA 60.077 63.158 13.34 13.34 0.00 4.55
409 410 0.682209 CCTACTCCCTCCGTTCGGAA 60.682 60.000 14.79 0.04 33.41 4.30
410 411 1.400737 CTACTCCCTCCGTTCGGAAT 58.599 55.000 14.79 2.09 33.41 3.01
411 412 1.755380 CTACTCCCTCCGTTCGGAATT 59.245 52.381 14.79 0.00 33.41 2.17
412 413 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
413 414 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
414 415 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
415 416 2.167900 CTCCCTCCGTTCGGAATTACTT 59.832 50.000 14.79 0.00 33.41 2.24
416 417 2.093869 TCCCTCCGTTCGGAATTACTTG 60.094 50.000 14.79 1.97 33.41 3.16
417 418 2.354403 CCCTCCGTTCGGAATTACTTGT 60.354 50.000 14.79 0.00 33.41 3.16
418 419 2.928116 CCTCCGTTCGGAATTACTTGTC 59.072 50.000 14.79 0.00 33.41 3.18
419 420 2.597305 CTCCGTTCGGAATTACTTGTCG 59.403 50.000 14.79 0.00 33.41 4.35
420 421 2.030007 TCCGTTCGGAATTACTTGTCGT 60.030 45.455 11.66 0.00 0.00 4.34
421 422 3.190327 TCCGTTCGGAATTACTTGTCGTA 59.810 43.478 11.66 0.00 0.00 3.43
422 423 3.545078 CCGTTCGGAATTACTTGTCGTAG 59.455 47.826 5.19 0.00 0.00 3.51
423 424 4.406069 CGTTCGGAATTACTTGTCGTAGA 58.594 43.478 0.00 0.00 0.00 2.59
424 425 4.853196 CGTTCGGAATTACTTGTCGTAGAA 59.147 41.667 0.00 0.00 39.69 2.10
425 426 5.343058 CGTTCGGAATTACTTGTCGTAGAAA 59.657 40.000 0.00 0.00 39.69 2.52
426 427 6.034256 CGTTCGGAATTACTTGTCGTAGAAAT 59.966 38.462 0.00 0.00 39.69 2.17
427 428 6.880822 TCGGAATTACTTGTCGTAGAAATG 57.119 37.500 0.00 0.00 39.69 2.32
428 429 5.808540 TCGGAATTACTTGTCGTAGAAATGG 59.191 40.000 0.00 0.00 39.69 3.16
429 430 5.808540 CGGAATTACTTGTCGTAGAAATGGA 59.191 40.000 0.00 0.00 39.69 3.41
430 431 6.479001 CGGAATTACTTGTCGTAGAAATGGAT 59.521 38.462 0.00 0.00 39.69 3.41
431 432 7.516785 CGGAATTACTTGTCGTAGAAATGGATG 60.517 40.741 0.00 0.00 39.69 3.51
432 433 7.280205 GGAATTACTTGTCGTAGAAATGGATGT 59.720 37.037 0.00 0.00 39.69 3.06
433 434 9.309516 GAATTACTTGTCGTAGAAATGGATGTA 57.690 33.333 0.00 0.00 39.69 2.29
434 435 9.832445 AATTACTTGTCGTAGAAATGGATGTAT 57.168 29.630 0.00 0.00 39.69 2.29
435 436 8.867112 TTACTTGTCGTAGAAATGGATGTATC 57.133 34.615 0.00 0.00 39.69 2.24
436 437 7.113658 ACTTGTCGTAGAAATGGATGTATCT 57.886 36.000 0.00 0.00 39.69 1.98
437 438 8.234136 ACTTGTCGTAGAAATGGATGTATCTA 57.766 34.615 0.00 0.00 39.69 1.98
438 439 8.353684 ACTTGTCGTAGAAATGGATGTATCTAG 58.646 37.037 0.00 0.00 39.69 2.43
439 440 8.459911 TTGTCGTAGAAATGGATGTATCTAGA 57.540 34.615 0.00 0.00 39.69 2.43
440 441 8.637196 TGTCGTAGAAATGGATGTATCTAGAT 57.363 34.615 10.73 10.73 39.69 1.98
441 442 8.515414 TGTCGTAGAAATGGATGTATCTAGATG 58.485 37.037 15.79 0.00 39.69 2.90
442 443 8.516234 GTCGTAGAAATGGATGTATCTAGATGT 58.484 37.037 15.79 1.25 39.69 3.06
443 444 9.734984 TCGTAGAAATGGATGTATCTAGATGTA 57.265 33.333 15.79 4.44 0.00 2.29
472 473 9.967346 TTAGTTCTAGATACATCCATTTTCGAG 57.033 33.333 0.00 0.00 0.00 4.04
473 474 8.239038 AGTTCTAGATACATCCATTTTCGAGA 57.761 34.615 0.00 0.00 0.00 4.04
474 475 8.138712 AGTTCTAGATACATCCATTTTCGAGAC 58.861 37.037 0.00 0.00 0.00 3.36
475 476 7.582667 TCTAGATACATCCATTTTCGAGACA 57.417 36.000 0.00 0.00 0.00 3.41
476 477 8.007405 TCTAGATACATCCATTTTCGAGACAA 57.993 34.615 0.00 0.00 0.00 3.18
477 478 8.138074 TCTAGATACATCCATTTTCGAGACAAG 58.862 37.037 0.00 0.00 0.00 3.16
478 479 6.644347 AGATACATCCATTTTCGAGACAAGT 58.356 36.000 0.00 0.00 0.00 3.16
479 480 7.782049 AGATACATCCATTTTCGAGACAAGTA 58.218 34.615 0.00 0.00 0.00 2.24
480 481 8.258007 AGATACATCCATTTTCGAGACAAGTAA 58.742 33.333 0.00 0.00 0.00 2.24
481 482 8.964476 ATACATCCATTTTCGAGACAAGTAAT 57.036 30.769 0.00 0.00 0.00 1.89
482 483 7.687941 ACATCCATTTTCGAGACAAGTAATT 57.312 32.000 0.00 0.00 0.00 1.40
483 484 8.786826 ACATCCATTTTCGAGACAAGTAATTA 57.213 30.769 0.00 0.00 0.00 1.40
484 485 8.665685 ACATCCATTTTCGAGACAAGTAATTAC 58.334 33.333 7.57 7.57 0.00 1.89
485 486 7.285783 TCCATTTTCGAGACAAGTAATTACG 57.714 36.000 9.91 0.00 0.00 3.18
486 487 7.092079 TCCATTTTCGAGACAAGTAATTACGA 58.908 34.615 9.91 0.00 0.00 3.43
487 488 7.599621 TCCATTTTCGAGACAAGTAATTACGAA 59.400 33.333 9.91 5.50 36.71 3.85
488 489 7.686938 CCATTTTCGAGACAAGTAATTACGAAC 59.313 37.037 9.91 4.02 37.85 3.95
489 490 5.980324 TTCGAGACAAGTAATTACGAACG 57.020 39.130 9.91 10.76 34.33 3.95
490 491 4.406069 TCGAGACAAGTAATTACGAACGG 58.594 43.478 9.91 2.48 0.00 4.44
491 492 4.154015 TCGAGACAAGTAATTACGAACGGA 59.846 41.667 9.91 1.32 0.00 4.69
492 493 4.494764 CGAGACAAGTAATTACGAACGGAG 59.505 45.833 9.91 0.00 0.00 4.63
493 494 4.741342 AGACAAGTAATTACGAACGGAGG 58.259 43.478 9.91 0.00 0.00 4.30
494 495 3.853475 ACAAGTAATTACGAACGGAGGG 58.147 45.455 9.91 0.00 0.00 4.30
495 496 3.511146 ACAAGTAATTACGAACGGAGGGA 59.489 43.478 9.91 0.00 0.00 4.20
496 497 4.110482 CAAGTAATTACGAACGGAGGGAG 58.890 47.826 9.91 0.00 0.00 4.30
497 498 3.359950 AGTAATTACGAACGGAGGGAGT 58.640 45.455 9.91 0.00 0.00 3.85
498 499 4.526970 AGTAATTACGAACGGAGGGAGTA 58.473 43.478 9.91 0.00 0.00 2.59
499 500 4.578105 AGTAATTACGAACGGAGGGAGTAG 59.422 45.833 9.91 0.00 0.00 2.57
500 501 1.098050 TTACGAACGGAGGGAGTAGC 58.902 55.000 0.00 0.00 0.00 3.58
501 502 0.254178 TACGAACGGAGGGAGTAGCT 59.746 55.000 0.00 0.00 0.00 3.32
502 503 0.611340 ACGAACGGAGGGAGTAGCTT 60.611 55.000 0.00 0.00 0.00 3.74
503 504 0.100861 CGAACGGAGGGAGTAGCTTC 59.899 60.000 0.00 0.00 0.00 3.86
504 505 0.460722 GAACGGAGGGAGTAGCTTCC 59.539 60.000 0.00 0.00 36.46 3.46
505 506 0.041386 AACGGAGGGAGTAGCTTCCT 59.959 55.000 4.45 0.00 43.32 3.36
506 507 0.041386 ACGGAGGGAGTAGCTTCCTT 59.959 55.000 4.45 0.00 40.10 3.36
507 508 1.196012 CGGAGGGAGTAGCTTCCTTT 58.804 55.000 4.45 0.00 40.10 3.11
508 509 1.137282 CGGAGGGAGTAGCTTCCTTTC 59.863 57.143 4.45 3.39 40.10 2.62
509 510 1.487142 GGAGGGAGTAGCTTCCTTTCC 59.513 57.143 4.45 8.18 40.10 3.13
510 511 2.188817 GAGGGAGTAGCTTCCTTTCCA 58.811 52.381 4.45 0.00 40.10 3.53
511 512 2.774809 GAGGGAGTAGCTTCCTTTCCAT 59.225 50.000 4.45 0.00 40.10 3.41
512 513 2.507471 AGGGAGTAGCTTCCTTTCCATG 59.493 50.000 4.45 0.00 35.59 3.66
513 514 2.239907 GGGAGTAGCTTCCTTTCCATGT 59.760 50.000 4.45 0.00 37.40 3.21
514 515 3.274288 GGAGTAGCTTCCTTTCCATGTG 58.726 50.000 0.00 0.00 34.27 3.21
515 516 2.680339 GAGTAGCTTCCTTTCCATGTGC 59.320 50.000 0.00 0.00 0.00 4.57
516 517 1.398390 GTAGCTTCCTTTCCATGTGCG 59.602 52.381 0.00 0.00 0.00 5.34
517 518 0.250901 AGCTTCCTTTCCATGTGCGT 60.251 50.000 0.00 0.00 0.00 5.24
518 519 0.109597 GCTTCCTTTCCATGTGCGTG 60.110 55.000 0.00 0.00 0.00 5.34
519 520 0.523072 CTTCCTTTCCATGTGCGTGG 59.477 55.000 4.11 4.11 40.76 4.94
520 521 0.893270 TTCCTTTCCATGTGCGTGGG 60.893 55.000 10.23 0.00 39.80 4.61
521 522 1.603455 CCTTTCCATGTGCGTGGGT 60.603 57.895 10.23 0.00 39.80 4.51
522 523 1.586154 CCTTTCCATGTGCGTGGGTC 61.586 60.000 10.23 0.00 39.80 4.46
523 524 1.586154 CTTTCCATGTGCGTGGGTCC 61.586 60.000 10.23 0.00 39.80 4.46
524 525 3.892740 TTCCATGTGCGTGGGTCCG 62.893 63.158 10.23 0.00 39.80 4.79
526 527 4.697756 CATGTGCGTGGGTCCGGT 62.698 66.667 0.00 0.00 0.00 5.28
527 528 4.697756 ATGTGCGTGGGTCCGGTG 62.698 66.667 0.00 0.00 0.00 4.94
532 533 3.755628 CGTGGGTCCGGTGTCGAT 61.756 66.667 0.00 0.00 39.00 3.59
533 534 2.125673 GTGGGTCCGGTGTCGATG 60.126 66.667 0.00 0.00 39.00 3.84
534 535 2.283316 TGGGTCCGGTGTCGATGA 60.283 61.111 0.00 0.00 39.00 2.92
535 536 1.909287 TGGGTCCGGTGTCGATGAA 60.909 57.895 0.00 0.00 39.00 2.57
536 537 1.261938 TGGGTCCGGTGTCGATGAAT 61.262 55.000 0.00 0.00 39.00 2.57
537 538 0.748450 GGGTCCGGTGTCGATGAATA 59.252 55.000 0.00 0.00 39.00 1.75
538 539 1.537562 GGGTCCGGTGTCGATGAATAC 60.538 57.143 0.00 0.00 39.00 1.89
539 540 1.474017 GTCCGGTGTCGATGAATACG 58.526 55.000 0.00 0.00 39.00 3.06
540 541 0.382873 TCCGGTGTCGATGAATACGG 59.617 55.000 0.00 0.00 41.06 4.02
541 542 1.213094 CCGGTGTCGATGAATACGGC 61.213 60.000 0.00 0.00 39.00 5.68
542 543 0.526739 CGGTGTCGATGAATACGGCA 60.527 55.000 0.00 0.00 42.88 5.69
544 545 3.355816 TGTCGATGAATACGGCACC 57.644 52.632 0.00 0.00 40.34 5.01
545 546 0.533032 TGTCGATGAATACGGCACCA 59.467 50.000 0.00 0.00 40.34 4.17
546 547 1.066787 TGTCGATGAATACGGCACCAA 60.067 47.619 0.00 0.00 40.34 3.67
547 548 2.004017 GTCGATGAATACGGCACCAAA 58.996 47.619 0.00 0.00 35.39 3.28
548 549 2.417239 GTCGATGAATACGGCACCAAAA 59.583 45.455 0.00 0.00 35.39 2.44
549 550 3.075148 TCGATGAATACGGCACCAAAAA 58.925 40.909 0.00 0.00 0.00 1.94
572 573 7.618502 AAAAAGCGGATACACACATAATACA 57.381 32.000 0.00 0.00 0.00 2.29
573 574 6.844696 AAAGCGGATACACACATAATACAG 57.155 37.500 0.00 0.00 0.00 2.74
574 575 5.784578 AGCGGATACACACATAATACAGA 57.215 39.130 0.00 0.00 0.00 3.41
575 576 5.773575 AGCGGATACACACATAATACAGAG 58.226 41.667 0.00 0.00 0.00 3.35
576 577 4.923871 GCGGATACACACATAATACAGAGG 59.076 45.833 0.00 0.00 0.00 3.69
577 578 4.923871 CGGATACACACATAATACAGAGGC 59.076 45.833 0.00 0.00 0.00 4.70
578 579 5.508994 CGGATACACACATAATACAGAGGCA 60.509 44.000 0.00 0.00 0.00 4.75
579 580 5.928839 GGATACACACATAATACAGAGGCAG 59.071 44.000 0.00 0.00 0.00 4.85
580 581 3.535561 ACACACATAATACAGAGGCAGC 58.464 45.455 0.00 0.00 0.00 5.25
581 582 2.541346 CACACATAATACAGAGGCAGCG 59.459 50.000 0.00 0.00 0.00 5.18
582 583 2.138320 CACATAATACAGAGGCAGCGG 58.862 52.381 0.00 0.00 0.00 5.52
583 584 1.070758 ACATAATACAGAGGCAGCGGG 59.929 52.381 0.00 0.00 0.00 6.13
584 585 0.687354 ATAATACAGAGGCAGCGGGG 59.313 55.000 0.00 0.00 0.00 5.73
585 586 0.397957 TAATACAGAGGCAGCGGGGA 60.398 55.000 0.00 0.00 0.00 4.81
586 587 1.056700 AATACAGAGGCAGCGGGGAT 61.057 55.000 0.00 0.00 0.00 3.85
587 588 1.476007 ATACAGAGGCAGCGGGGATC 61.476 60.000 0.00 0.00 0.00 3.36
588 589 4.247380 CAGAGGCAGCGGGGATCC 62.247 72.222 1.92 1.92 0.00 3.36
589 590 4.804420 AGAGGCAGCGGGGATCCA 62.804 66.667 15.23 0.00 0.00 3.41
590 591 4.554036 GAGGCAGCGGGGATCCAC 62.554 72.222 15.23 9.60 0.00 4.02
592 593 4.195334 GGCAGCGGGGATCCACAT 62.195 66.667 16.00 0.00 0.00 3.21
593 594 2.903855 GCAGCGGGGATCCACATG 60.904 66.667 16.00 13.25 0.00 3.21
594 595 2.203252 CAGCGGGGATCCACATGG 60.203 66.667 16.00 0.00 0.00 3.66
595 596 4.195334 AGCGGGGATCCACATGGC 62.195 66.667 16.00 9.70 34.44 4.40
599 600 4.504596 GGGATCCACATGGCGCCA 62.505 66.667 34.80 34.80 34.44 5.69
600 601 2.903855 GGATCCACATGGCGCCAG 60.904 66.667 35.36 26.66 34.44 4.85
601 602 2.903855 GATCCACATGGCGCCAGG 60.904 66.667 37.40 37.40 34.44 4.45
602 603 3.405093 GATCCACATGGCGCCAGGA 62.405 63.158 44.23 37.27 34.44 3.86
603 604 3.704231 ATCCACATGGCGCCAGGAC 62.704 63.158 44.23 11.29 34.44 3.85
607 608 4.552365 CATGGCGCCAGGACGGAT 62.552 66.667 36.51 13.76 36.56 4.18
608 609 4.552365 ATGGCGCCAGGACGGATG 62.552 66.667 35.36 0.00 36.56 3.51
610 611 4.899239 GGCGCCAGGACGGATGAG 62.899 72.222 24.80 0.00 36.56 2.90
611 612 3.838271 GCGCCAGGACGGATGAGA 61.838 66.667 0.00 0.00 36.56 3.27
612 613 3.133014 CGCCAGGACGGATGAGAT 58.867 61.111 0.00 0.00 36.56 2.75
613 614 1.806461 GCGCCAGGACGGATGAGATA 61.806 60.000 0.00 0.00 36.56 1.98
614 615 0.039074 CGCCAGGACGGATGAGATAC 60.039 60.000 0.00 0.00 36.56 2.24
615 616 0.318762 GCCAGGACGGATGAGATACC 59.681 60.000 0.00 0.00 36.56 2.73
620 621 2.258591 CGGATGAGATACCGGCCG 59.741 66.667 21.04 21.04 44.59 6.13
621 622 2.657237 GGATGAGATACCGGCCGG 59.343 66.667 42.17 42.17 42.03 6.13
622 623 2.048127 GATGAGATACCGGCCGGC 60.048 66.667 43.58 27.54 39.32 6.13
623 624 3.591254 GATGAGATACCGGCCGGCC 62.591 68.421 43.58 36.69 39.32 6.13
624 625 4.853142 TGAGATACCGGCCGGCCT 62.853 66.667 43.58 34.61 39.32 5.19
625 626 4.301027 GAGATACCGGCCGGCCTG 62.301 72.222 43.58 36.89 39.32 4.85
669 670 3.706600 TTCGGTTACTTGTGCCCTTAT 57.293 42.857 0.00 0.00 0.00 1.73
670 671 4.822685 TTCGGTTACTTGTGCCCTTATA 57.177 40.909 0.00 0.00 0.00 0.98
671 672 5.362105 TTCGGTTACTTGTGCCCTTATAT 57.638 39.130 0.00 0.00 0.00 0.86
672 673 6.482898 TTCGGTTACTTGTGCCCTTATATA 57.517 37.500 0.00 0.00 0.00 0.86
673 674 6.482898 TCGGTTACTTGTGCCCTTATATAA 57.517 37.500 0.00 0.00 0.00 0.98
677 678 9.275398 CGGTTACTTGTGCCCTTATATAAATAA 57.725 33.333 0.00 0.00 0.00 1.40
705 706 3.318275 ACTCAAGTCACGAGCTGTTCTTA 59.682 43.478 0.00 0.00 33.58 2.10
713 714 6.206243 AGTCACGAGCTGTTCTTACTACTTTA 59.794 38.462 0.00 0.00 0.00 1.85
773 774 6.879458 CCGGATAGGTAAATTATTTCTCCAGG 59.121 42.308 0.00 0.00 34.51 4.45
780 781 4.796110 AATTATTTCTCCAGGCAGGCTA 57.204 40.909 0.00 0.00 37.29 3.93
786 787 1.538876 TCCAGGCAGGCTAACCAGT 60.539 57.895 8.33 0.00 39.06 4.00
805 809 7.195374 ACCAGTAGCTTTACCTAATCAATCA 57.805 36.000 0.00 0.00 0.00 2.57
906 926 0.736325 CGAAGCCTTCACGTTCGGAT 60.736 55.000 5.14 0.00 39.48 4.18
907 927 1.000145 GAAGCCTTCACGTTCGGATC 59.000 55.000 0.00 0.00 0.00 3.36
944 1269 0.179018 AGGTTGCAACACCTCCTGAC 60.179 55.000 29.55 9.95 44.63 3.51
1136 1567 1.136695 AGACTCATCTAGCAGCAGCAC 59.863 52.381 3.17 0.00 45.49 4.40
1166 1597 1.280457 ATTCCCCTCAAGCGTTCTCT 58.720 50.000 0.00 0.00 0.00 3.10
2027 6312 4.947388 GGTGGACATAATGGACTTTGCTAA 59.053 41.667 0.00 0.00 0.00 3.09
2063 6354 8.349568 AGCATGATACCTTATACGACTAATGA 57.650 34.615 0.00 0.00 0.00 2.57
2154 6514 8.940952 CCGAAAGAAGACTTCATTCTAATTTCT 58.059 33.333 23.54 0.00 35.98 2.52
2342 7372 7.428282 AACATATGTGTTTATGTGTCAACGA 57.572 32.000 9.63 0.00 46.07 3.85
2759 7793 4.803613 CCATCATCTCACACAATTGCATTG 59.196 41.667 5.05 0.00 45.59 2.82
2820 7861 6.409524 TTGTTAAGGACTCCGAAACTTCTA 57.590 37.500 13.60 0.00 0.00 2.10
2900 7943 3.650942 TCTCTTTGCCCCTTTCACTCTAA 59.349 43.478 0.00 0.00 0.00 2.10
2908 7951 2.076863 CCTTTCACTCTAACGGCCAAG 58.923 52.381 2.24 0.00 0.00 3.61
2941 7984 2.416107 ATCGGGCGGCATGATTCCAT 62.416 55.000 12.47 0.00 0.00 3.41
2959 8002 7.555914 TGATTCCATTCGTCATTTATCCTTTCA 59.444 33.333 0.00 0.00 0.00 2.69
3024 8067 9.811995 TGATAGACATAACAATTACAGGTACAC 57.188 33.333 0.00 0.00 0.00 2.90
3031 8074 4.178540 ACAATTACAGGTACACCGATTCG 58.821 43.478 0.00 0.00 42.08 3.34
3075 8118 4.807643 GCCTCAAATCTTAAGTGACAGGGT 60.808 45.833 1.63 0.00 0.00 4.34
3076 8119 4.938226 CCTCAAATCTTAAGTGACAGGGTC 59.062 45.833 1.63 0.00 0.00 4.46
3079 8126 5.244402 TCAAATCTTAAGTGACAGGGTCGTA 59.756 40.000 1.63 0.00 34.95 3.43
3110 8157 1.981853 GGGGCCCATTGCGAAAAGA 60.982 57.895 26.86 0.00 42.61 2.52
3126 8173 6.106003 GCGAAAAGAAAATGGGGTCATAAAT 58.894 36.000 0.00 0.00 32.44 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
85 86 8.017373 CACAATCTGTTCCAAATACTGTAACTG 58.983 37.037 0.00 0.00 0.00 3.16
86 87 7.308589 GCACAATCTGTTCCAAATACTGTAACT 60.309 37.037 0.00 0.00 0.00 2.24
88 89 6.348132 CGCACAATCTGTTCCAAATACTGTAA 60.348 38.462 0.00 0.00 0.00 2.41
90 91 4.083324 CGCACAATCTGTTCCAAATACTGT 60.083 41.667 0.00 0.00 0.00 3.55
91 92 4.083324 ACGCACAATCTGTTCCAAATACTG 60.083 41.667 0.00 0.00 0.00 2.74
92 93 4.072131 ACGCACAATCTGTTCCAAATACT 58.928 39.130 0.00 0.00 0.00 2.12
94 95 4.068599 TCACGCACAATCTGTTCCAAATA 58.931 39.130 0.00 0.00 0.00 1.40
95 96 2.884012 TCACGCACAATCTGTTCCAAAT 59.116 40.909 0.00 0.00 0.00 2.32
96 97 2.032799 GTCACGCACAATCTGTTCCAAA 59.967 45.455 0.00 0.00 0.00 3.28
98 99 1.225855 GTCACGCACAATCTGTTCCA 58.774 50.000 0.00 0.00 0.00 3.53
99 100 1.195448 CTGTCACGCACAATCTGTTCC 59.805 52.381 0.00 0.00 33.31 3.62
100 101 1.867233 ACTGTCACGCACAATCTGTTC 59.133 47.619 0.00 0.00 33.31 3.18
101 102 1.953559 ACTGTCACGCACAATCTGTT 58.046 45.000 0.00 0.00 33.31 3.16
102 103 2.812358 TACTGTCACGCACAATCTGT 57.188 45.000 0.00 0.00 33.31 3.41
103 104 3.725895 GCAATACTGTCACGCACAATCTG 60.726 47.826 0.00 0.00 33.31 2.90
104 105 2.416547 GCAATACTGTCACGCACAATCT 59.583 45.455 0.00 0.00 33.31 2.40
105 106 2.159430 TGCAATACTGTCACGCACAATC 59.841 45.455 0.00 0.00 33.31 2.67
106 107 2.150390 TGCAATACTGTCACGCACAAT 58.850 42.857 0.00 0.00 33.31 2.71
107 108 1.530720 CTGCAATACTGTCACGCACAA 59.469 47.619 0.00 0.00 33.31 3.33
108 109 1.147473 CTGCAATACTGTCACGCACA 58.853 50.000 0.00 0.00 0.00 4.57
109 110 1.148310 ACTGCAATACTGTCACGCAC 58.852 50.000 0.00 0.00 0.00 5.34
110 111 1.877637 AACTGCAATACTGTCACGCA 58.122 45.000 0.00 0.00 0.00 5.24
111 112 3.424433 GGTTAACTGCAATACTGTCACGC 60.424 47.826 5.42 0.00 0.00 5.34
112 113 3.994392 AGGTTAACTGCAATACTGTCACG 59.006 43.478 5.42 0.00 0.00 4.35
113 114 5.238583 AGAGGTTAACTGCAATACTGTCAC 58.761 41.667 5.42 0.00 0.00 3.67
114 115 5.483685 AGAGGTTAACTGCAATACTGTCA 57.516 39.130 5.42 0.00 0.00 3.58
115 116 5.932303 TCAAGAGGTTAACTGCAATACTGTC 59.068 40.000 5.42 0.00 0.00 3.51
116 117 5.865085 TCAAGAGGTTAACTGCAATACTGT 58.135 37.500 5.42 0.00 0.00 3.55
117 118 6.992063 ATCAAGAGGTTAACTGCAATACTG 57.008 37.500 5.42 0.00 0.00 2.74
118 119 7.448469 ACAAATCAAGAGGTTAACTGCAATACT 59.552 33.333 5.42 0.00 0.00 2.12
119 120 7.593825 ACAAATCAAGAGGTTAACTGCAATAC 58.406 34.615 5.42 0.00 0.00 1.89
120 121 7.759489 ACAAATCAAGAGGTTAACTGCAATA 57.241 32.000 5.42 0.00 0.00 1.90
121 122 6.655078 ACAAATCAAGAGGTTAACTGCAAT 57.345 33.333 5.42 0.00 0.00 3.56
122 123 6.321181 AGAACAAATCAAGAGGTTAACTGCAA 59.679 34.615 5.42 0.00 0.00 4.08
123 124 5.827797 AGAACAAATCAAGAGGTTAACTGCA 59.172 36.000 5.42 0.00 0.00 4.41
124 125 6.319141 AGAACAAATCAAGAGGTTAACTGC 57.681 37.500 5.42 0.00 0.00 4.40
152 153 8.999220 TTACCGTTTAATTGAGGTTTGTTTTT 57.001 26.923 0.00 0.00 38.12 1.94
153 154 8.871862 GTTTACCGTTTAATTGAGGTTTGTTTT 58.128 29.630 0.00 0.00 38.12 2.43
154 155 8.252417 AGTTTACCGTTTAATTGAGGTTTGTTT 58.748 29.630 0.00 0.00 38.12 2.83
155 156 7.703197 CAGTTTACCGTTTAATTGAGGTTTGTT 59.297 33.333 0.00 0.00 38.12 2.83
156 157 7.067251 TCAGTTTACCGTTTAATTGAGGTTTGT 59.933 33.333 0.00 0.00 38.12 2.83
157 158 7.419204 TCAGTTTACCGTTTAATTGAGGTTTG 58.581 34.615 0.00 0.00 38.12 2.93
158 159 7.571080 TCAGTTTACCGTTTAATTGAGGTTT 57.429 32.000 0.00 0.00 38.12 3.27
159 160 7.571080 TTCAGTTTACCGTTTAATTGAGGTT 57.429 32.000 0.00 0.00 38.12 3.50
160 161 7.754851 ATTCAGTTTACCGTTTAATTGAGGT 57.245 32.000 0.00 0.00 40.52 3.85
168 169 9.991388 GCACATATTTATTCAGTTTACCGTTTA 57.009 29.630 0.00 0.00 0.00 2.01
169 170 8.516234 TGCACATATTTATTCAGTTTACCGTTT 58.484 29.630 0.00 0.00 0.00 3.60
170 171 8.046294 TGCACATATTTATTCAGTTTACCGTT 57.954 30.769 0.00 0.00 0.00 4.44
171 172 7.335924 ACTGCACATATTTATTCAGTTTACCGT 59.664 33.333 0.00 0.00 31.51 4.83
172 173 7.693952 ACTGCACATATTTATTCAGTTTACCG 58.306 34.615 0.00 0.00 31.51 4.02
178 179 8.604035 CGAACTAACTGCACATATTTATTCAGT 58.396 33.333 0.00 0.00 36.46 3.41
179 180 8.604035 ACGAACTAACTGCACATATTTATTCAG 58.396 33.333 0.00 0.00 0.00 3.02
180 181 8.487313 ACGAACTAACTGCACATATTTATTCA 57.513 30.769 0.00 0.00 0.00 2.57
181 182 8.062448 GGACGAACTAACTGCACATATTTATTC 58.938 37.037 0.00 0.00 0.00 1.75
182 183 7.551262 TGGACGAACTAACTGCACATATTTATT 59.449 33.333 0.00 0.00 0.00 1.40
183 184 7.045416 TGGACGAACTAACTGCACATATTTAT 58.955 34.615 0.00 0.00 0.00 1.40
184 185 6.399743 TGGACGAACTAACTGCACATATTTA 58.600 36.000 0.00 0.00 0.00 1.40
185 186 5.242434 TGGACGAACTAACTGCACATATTT 58.758 37.500 0.00 0.00 0.00 1.40
186 187 4.827692 TGGACGAACTAACTGCACATATT 58.172 39.130 0.00 0.00 0.00 1.28
187 188 4.465632 TGGACGAACTAACTGCACATAT 57.534 40.909 0.00 0.00 0.00 1.78
188 189 3.945981 TGGACGAACTAACTGCACATA 57.054 42.857 0.00 0.00 0.00 2.29
189 190 2.831685 TGGACGAACTAACTGCACAT 57.168 45.000 0.00 0.00 0.00 3.21
190 191 2.412870 CATGGACGAACTAACTGCACA 58.587 47.619 0.00 0.00 0.00 4.57
191 192 1.732259 CCATGGACGAACTAACTGCAC 59.268 52.381 5.56 0.00 0.00 4.57
192 193 1.346395 ACCATGGACGAACTAACTGCA 59.654 47.619 21.47 0.00 0.00 4.41
193 194 2.000447 GACCATGGACGAACTAACTGC 59.000 52.381 21.47 0.00 0.00 4.40
194 195 3.313012 TGACCATGGACGAACTAACTG 57.687 47.619 21.47 0.00 0.00 3.16
195 196 4.253685 CATTGACCATGGACGAACTAACT 58.746 43.478 21.47 0.00 0.00 2.24
196 197 3.181510 GCATTGACCATGGACGAACTAAC 60.182 47.826 21.47 0.00 32.81 2.34
197 198 3.006940 GCATTGACCATGGACGAACTAA 58.993 45.455 21.47 2.27 32.81 2.24
198 199 2.236146 AGCATTGACCATGGACGAACTA 59.764 45.455 21.47 1.86 32.81 2.24
199 200 1.003580 AGCATTGACCATGGACGAACT 59.996 47.619 21.47 11.34 32.81 3.01
200 201 1.131126 CAGCATTGACCATGGACGAAC 59.869 52.381 21.47 9.13 32.81 3.95
201 202 1.452110 CAGCATTGACCATGGACGAA 58.548 50.000 21.47 9.92 32.81 3.85
202 203 0.392863 CCAGCATTGACCATGGACGA 60.393 55.000 21.47 13.42 34.60 4.20
203 204 1.378882 CCCAGCATTGACCATGGACG 61.379 60.000 21.47 0.49 34.60 4.79
204 205 1.669999 GCCCAGCATTGACCATGGAC 61.670 60.000 21.47 13.94 34.60 4.02
205 206 1.380246 GCCCAGCATTGACCATGGA 60.380 57.895 21.47 0.00 34.60 3.41
206 207 2.428925 GGCCCAGCATTGACCATGG 61.429 63.158 11.19 11.19 32.81 3.66
207 208 1.683025 TGGCCCAGCATTGACCATG 60.683 57.895 0.00 0.00 35.73 3.66
208 209 1.683365 GTGGCCCAGCATTGACCAT 60.683 57.895 0.00 0.00 34.30 3.55
209 210 2.283101 GTGGCCCAGCATTGACCA 60.283 61.111 0.00 0.00 0.00 4.02
210 211 3.443045 CGTGGCCCAGCATTGACC 61.443 66.667 0.00 0.00 0.00 4.02
211 212 2.672996 ACGTGGCCCAGCATTGAC 60.673 61.111 0.00 0.00 0.00 3.18
212 213 2.359850 GACGTGGCCCAGCATTGA 60.360 61.111 0.00 0.00 0.00 2.57
213 214 3.803082 CGACGTGGCCCAGCATTG 61.803 66.667 0.00 0.00 0.00 2.82
223 224 1.589993 CATCTAGCAGCCGACGTGG 60.590 63.158 0.00 0.00 42.50 4.94
224 225 2.233654 GCATCTAGCAGCCGACGTG 61.234 63.158 0.00 0.00 44.79 4.49
225 226 2.105128 GCATCTAGCAGCCGACGT 59.895 61.111 0.00 0.00 44.79 4.34
234 235 0.807667 CGTCCACCAGTGCATCTAGC 60.808 60.000 0.00 0.00 45.96 3.42
235 236 0.532573 ACGTCCACCAGTGCATCTAG 59.467 55.000 0.00 0.00 0.00 2.43
236 237 0.246360 CACGTCCACCAGTGCATCTA 59.754 55.000 0.00 0.00 0.00 1.98
237 238 1.004560 CACGTCCACCAGTGCATCT 60.005 57.895 0.00 0.00 0.00 2.90
238 239 2.034879 CCACGTCCACCAGTGCATC 61.035 63.158 0.00 0.00 37.07 3.91
239 240 2.032528 CCACGTCCACCAGTGCAT 59.967 61.111 0.00 0.00 37.07 3.96
240 241 4.927782 GCCACGTCCACCAGTGCA 62.928 66.667 0.00 0.00 37.07 4.57
241 242 4.626081 AGCCACGTCCACCAGTGC 62.626 66.667 0.00 0.00 37.07 4.40
242 243 2.357517 GAGCCACGTCCACCAGTG 60.358 66.667 0.00 0.00 38.05 3.66
243 244 2.524394 AGAGCCACGTCCACCAGT 60.524 61.111 0.00 0.00 0.00 4.00
244 245 2.262915 GAGAGCCACGTCCACCAG 59.737 66.667 0.00 0.00 0.00 4.00
245 246 3.311110 GGAGAGCCACGTCCACCA 61.311 66.667 0.00 0.00 32.55 4.17
246 247 4.436998 CGGAGAGCCACGTCCACC 62.437 72.222 0.00 0.00 32.55 4.61
257 258 2.580867 GCTGTAGCGTGCGGAGAG 60.581 66.667 0.00 0.00 0.00 3.20
258 259 3.370231 TGCTGTAGCGTGCGGAGA 61.370 61.111 0.00 0.00 45.83 3.71
259 260 3.181967 GTGCTGTAGCGTGCGGAG 61.182 66.667 0.00 0.00 45.83 4.63
260 261 3.295304 ATGTGCTGTAGCGTGCGGA 62.295 57.895 0.00 0.00 45.83 5.54
261 262 2.815211 ATGTGCTGTAGCGTGCGG 60.815 61.111 0.00 0.00 45.83 5.69
262 263 1.423721 ATCATGTGCTGTAGCGTGCG 61.424 55.000 0.00 0.00 45.83 5.34
263 264 0.729116 AATCATGTGCTGTAGCGTGC 59.271 50.000 0.00 0.00 45.83 5.34
264 265 2.030091 CAGAATCATGTGCTGTAGCGTG 59.970 50.000 0.00 0.00 45.83 5.34
265 266 2.274437 CAGAATCATGTGCTGTAGCGT 58.726 47.619 0.00 0.00 45.83 5.07
266 267 1.004185 GCAGAATCATGTGCTGTAGCG 60.004 52.381 11.69 0.00 42.31 4.26
267 268 2.752144 GCAGAATCATGTGCTGTAGC 57.248 50.000 11.69 0.00 42.31 3.58
273 274 3.243877 CACGTACTAGCAGAATCATGTGC 59.756 47.826 0.00 0.00 45.75 4.57
274 275 4.500837 GTCACGTACTAGCAGAATCATGTG 59.499 45.833 0.00 0.00 0.00 3.21
275 276 4.157840 TGTCACGTACTAGCAGAATCATGT 59.842 41.667 0.00 0.00 0.00 3.21
276 277 4.672409 TGTCACGTACTAGCAGAATCATG 58.328 43.478 0.00 0.00 0.00 3.07
277 278 4.399618 ACTGTCACGTACTAGCAGAATCAT 59.600 41.667 9.77 0.00 0.00 2.45
278 279 3.756963 ACTGTCACGTACTAGCAGAATCA 59.243 43.478 9.77 0.00 0.00 2.57
279 280 4.095185 AGACTGTCACGTACTAGCAGAATC 59.905 45.833 10.88 1.22 0.00 2.52
280 281 4.011023 AGACTGTCACGTACTAGCAGAAT 58.989 43.478 10.88 0.00 0.00 2.40
281 282 3.409570 AGACTGTCACGTACTAGCAGAA 58.590 45.455 10.88 0.00 0.00 3.02
282 283 3.055209 AGACTGTCACGTACTAGCAGA 57.945 47.619 10.88 0.00 0.00 4.26
283 284 3.493272 CAAGACTGTCACGTACTAGCAG 58.507 50.000 10.88 0.00 0.00 4.24
284 285 2.228103 CCAAGACTGTCACGTACTAGCA 59.772 50.000 10.88 0.00 0.00 3.49
285 286 2.864968 CCAAGACTGTCACGTACTAGC 58.135 52.381 10.88 0.00 0.00 3.42
286 287 2.728225 CGCCAAGACTGTCACGTACTAG 60.728 54.545 10.88 0.00 0.00 2.57
287 288 1.198408 CGCCAAGACTGTCACGTACTA 59.802 52.381 10.88 0.00 0.00 1.82
288 289 0.039437 CGCCAAGACTGTCACGTACT 60.039 55.000 10.88 0.00 0.00 2.73
289 290 1.615107 GCGCCAAGACTGTCACGTAC 61.615 60.000 10.88 0.00 0.00 3.67
290 291 1.372499 GCGCCAAGACTGTCACGTA 60.372 57.895 10.88 0.00 0.00 3.57
291 292 2.661866 GCGCCAAGACTGTCACGT 60.662 61.111 10.88 0.00 0.00 4.49
292 293 2.356313 AGCGCCAAGACTGTCACG 60.356 61.111 10.88 9.04 0.00 4.35
293 294 2.320587 CCAGCGCCAAGACTGTCAC 61.321 63.158 10.88 0.00 31.76 3.67
294 295 1.468506 TACCAGCGCCAAGACTGTCA 61.469 55.000 10.88 0.00 31.76 3.58
295 296 1.014564 GTACCAGCGCCAAGACTGTC 61.015 60.000 2.29 0.00 31.76 3.51
296 297 1.004918 GTACCAGCGCCAAGACTGT 60.005 57.895 2.29 0.00 31.76 3.55
297 298 0.391661 ATGTACCAGCGCCAAGACTG 60.392 55.000 2.29 0.00 0.00 3.51
298 299 0.391661 CATGTACCAGCGCCAAGACT 60.392 55.000 2.29 0.00 0.00 3.24
299 300 1.982073 GCATGTACCAGCGCCAAGAC 61.982 60.000 2.29 0.00 0.00 3.01
300 301 1.745115 GCATGTACCAGCGCCAAGA 60.745 57.895 2.29 0.00 0.00 3.02
301 302 1.585267 TTGCATGTACCAGCGCCAAG 61.585 55.000 2.29 0.00 0.00 3.61
302 303 1.175347 TTTGCATGTACCAGCGCCAA 61.175 50.000 2.29 0.00 0.00 4.52
303 304 1.585267 CTTTGCATGTACCAGCGCCA 61.585 55.000 2.29 0.00 0.00 5.69
304 305 1.137404 CTTTGCATGTACCAGCGCC 59.863 57.895 2.29 0.00 0.00 6.53
305 306 0.521291 TTCTTTGCATGTACCAGCGC 59.479 50.000 0.00 0.00 0.00 5.92
306 307 2.987413 TTTCTTTGCATGTACCAGCG 57.013 45.000 0.00 0.00 0.00 5.18
307 308 5.708948 TGTATTTTCTTTGCATGTACCAGC 58.291 37.500 0.00 0.06 0.00 4.85
308 309 5.801947 GCTGTATTTTCTTTGCATGTACCAG 59.198 40.000 0.00 0.00 0.00 4.00
309 310 5.336372 GGCTGTATTTTCTTTGCATGTACCA 60.336 40.000 0.00 0.00 0.00 3.25
310 311 5.102313 GGCTGTATTTTCTTTGCATGTACC 58.898 41.667 0.00 0.00 0.00 3.34
311 312 5.102313 GGGCTGTATTTTCTTTGCATGTAC 58.898 41.667 0.00 0.00 0.00 2.90
312 313 4.769488 TGGGCTGTATTTTCTTTGCATGTA 59.231 37.500 0.00 0.00 0.00 2.29
313 314 3.577848 TGGGCTGTATTTTCTTTGCATGT 59.422 39.130 0.00 0.00 0.00 3.21
314 315 4.191033 TGGGCTGTATTTTCTTTGCATG 57.809 40.909 0.00 0.00 0.00 4.06
315 316 4.467082 TGATGGGCTGTATTTTCTTTGCAT 59.533 37.500 0.00 0.00 0.00 3.96
316 317 3.831333 TGATGGGCTGTATTTTCTTTGCA 59.169 39.130 0.00 0.00 0.00 4.08
317 318 4.082026 ACTGATGGGCTGTATTTTCTTTGC 60.082 41.667 0.00 0.00 0.00 3.68
318 319 5.047802 ACACTGATGGGCTGTATTTTCTTTG 60.048 40.000 0.00 0.00 0.00 2.77
319 320 5.079643 ACACTGATGGGCTGTATTTTCTTT 58.920 37.500 0.00 0.00 0.00 2.52
320 321 4.666512 ACACTGATGGGCTGTATTTTCTT 58.333 39.130 0.00 0.00 0.00 2.52
321 322 4.307032 ACACTGATGGGCTGTATTTTCT 57.693 40.909 0.00 0.00 0.00 2.52
322 323 5.186198 AGTACACTGATGGGCTGTATTTTC 58.814 41.667 0.00 0.00 0.00 2.29
323 324 5.179452 AGTACACTGATGGGCTGTATTTT 57.821 39.130 0.00 0.00 0.00 1.82
324 325 4.844349 AGTACACTGATGGGCTGTATTT 57.156 40.909 0.00 0.00 0.00 1.40
325 326 4.962995 ACTAGTACACTGATGGGCTGTATT 59.037 41.667 0.00 0.00 0.00 1.89
326 327 4.342378 CACTAGTACACTGATGGGCTGTAT 59.658 45.833 0.00 0.00 0.00 2.29
327 328 3.699538 CACTAGTACACTGATGGGCTGTA 59.300 47.826 0.00 0.00 0.00 2.74
328 329 2.497675 CACTAGTACACTGATGGGCTGT 59.502 50.000 0.00 0.00 0.00 4.40
329 330 2.739932 GCACTAGTACACTGATGGGCTG 60.740 54.545 0.00 0.00 0.00 4.85
330 331 1.482593 GCACTAGTACACTGATGGGCT 59.517 52.381 0.00 0.00 0.00 5.19
331 332 1.802880 CGCACTAGTACACTGATGGGC 60.803 57.143 0.00 0.00 0.00 5.36
332 333 1.202417 CCGCACTAGTACACTGATGGG 60.202 57.143 0.00 0.00 0.00 4.00
333 334 1.749063 TCCGCACTAGTACACTGATGG 59.251 52.381 0.00 0.00 0.00 3.51
334 335 2.683362 TCTCCGCACTAGTACACTGATG 59.317 50.000 0.00 0.00 0.00 3.07
335 336 3.000684 TCTCCGCACTAGTACACTGAT 57.999 47.619 0.00 0.00 0.00 2.90
336 337 2.484742 TCTCCGCACTAGTACACTGA 57.515 50.000 0.00 0.00 0.00 3.41
337 338 2.796383 GCATCTCCGCACTAGTACACTG 60.796 54.545 0.00 0.00 0.00 3.66
338 339 1.405821 GCATCTCCGCACTAGTACACT 59.594 52.381 0.00 0.00 0.00 3.55
339 340 1.405821 AGCATCTCCGCACTAGTACAC 59.594 52.381 0.00 0.00 0.00 2.90
340 341 1.405463 CAGCATCTCCGCACTAGTACA 59.595 52.381 0.00 0.00 0.00 2.90
341 342 1.405821 ACAGCATCTCCGCACTAGTAC 59.594 52.381 0.00 0.00 0.00 2.73
342 343 1.405463 CACAGCATCTCCGCACTAGTA 59.595 52.381 0.00 0.00 0.00 1.82
343 344 0.174389 CACAGCATCTCCGCACTAGT 59.826 55.000 0.00 0.00 0.00 2.57
344 345 1.150567 GCACAGCATCTCCGCACTAG 61.151 60.000 0.00 0.00 0.00 2.57
345 346 1.153568 GCACAGCATCTCCGCACTA 60.154 57.895 0.00 0.00 0.00 2.74
346 347 2.435586 GCACAGCATCTCCGCACT 60.436 61.111 0.00 0.00 0.00 4.40
347 348 3.857854 CGCACAGCATCTCCGCAC 61.858 66.667 0.00 0.00 0.00 5.34
352 353 4.783621 TGGGCCGCACAGCATCTC 62.784 66.667 0.00 0.00 0.00 2.75
353 354 4.119363 ATGGGCCGCACAGCATCT 62.119 61.111 0.00 0.00 0.00 2.90
354 355 3.896133 CATGGGCCGCACAGCATC 61.896 66.667 0.00 0.00 0.00 3.91
355 356 4.746309 ACATGGGCCGCACAGCAT 62.746 61.111 0.00 0.00 0.00 3.79
358 359 3.129502 CTGACATGGGCCGCACAG 61.130 66.667 0.00 2.17 0.00 3.66
359 360 3.610619 CTCTGACATGGGCCGCACA 62.611 63.158 0.00 0.00 0.00 4.57
360 361 2.821366 CTCTGACATGGGCCGCAC 60.821 66.667 0.00 0.00 0.00 5.34
361 362 4.100084 CCTCTGACATGGGCCGCA 62.100 66.667 0.00 0.00 0.00 5.69
364 365 4.101448 ACGCCTCTGACATGGGCC 62.101 66.667 0.00 0.00 42.58 5.80
365 366 2.821366 CACGCCTCTGACATGGGC 60.821 66.667 0.00 8.30 42.18 5.36
366 367 2.821366 GCACGCCTCTGACATGGG 60.821 66.667 0.00 0.00 0.00 4.00
367 368 2.821366 GGCACGCCTCTGACATGG 60.821 66.667 0.00 0.00 0.00 3.66
368 369 2.046988 TGGCACGCCTCTGACATG 60.047 61.111 9.92 0.00 36.94 3.21
369 370 2.046892 GTGGCACGCCTCTGACAT 60.047 61.111 9.92 0.00 36.94 3.06
370 371 3.519973 CTGTGGCACGCCTCTGACA 62.520 63.158 13.77 4.26 38.60 3.58
371 372 2.740055 CTGTGGCACGCCTCTGAC 60.740 66.667 13.77 0.00 38.60 3.51
372 373 2.917227 TCTGTGGCACGCCTCTGA 60.917 61.111 13.77 12.08 38.60 3.27
373 374 2.740055 GTCTGTGGCACGCCTCTG 60.740 66.667 13.77 9.90 38.60 3.35
374 375 4.008933 GGTCTGTGGCACGCCTCT 62.009 66.667 13.77 0.00 38.60 3.69
375 376 2.646175 TAGGTCTGTGGCACGCCTC 61.646 63.158 24.60 6.39 38.60 4.70
376 377 2.603473 TAGGTCTGTGGCACGCCT 60.603 61.111 24.39 24.39 38.60 5.52
377 378 2.434359 GTAGGTCTGTGGCACGCC 60.434 66.667 13.77 14.53 38.60 5.68
378 379 1.446272 GAGTAGGTCTGTGGCACGC 60.446 63.158 13.77 5.65 40.62 5.34
379 380 1.215647 GGAGTAGGTCTGTGGCACG 59.784 63.158 13.77 8.10 0.00 5.34
380 381 0.905337 AGGGAGTAGGTCTGTGGCAC 60.905 60.000 11.55 11.55 0.00 5.01
381 382 0.614979 GAGGGAGTAGGTCTGTGGCA 60.615 60.000 0.00 0.00 0.00 4.92
382 383 1.331399 GGAGGGAGTAGGTCTGTGGC 61.331 65.000 0.00 0.00 0.00 5.01
383 384 1.038130 CGGAGGGAGTAGGTCTGTGG 61.038 65.000 0.00 0.00 0.00 4.17
384 385 0.323542 ACGGAGGGAGTAGGTCTGTG 60.324 60.000 0.00 0.00 0.00 3.66
385 386 0.408700 AACGGAGGGAGTAGGTCTGT 59.591 55.000 0.00 0.00 0.00 3.41
386 387 1.104630 GAACGGAGGGAGTAGGTCTG 58.895 60.000 0.00 0.00 0.00 3.51
387 388 0.394080 CGAACGGAGGGAGTAGGTCT 60.394 60.000 0.00 0.00 0.00 3.85
388 389 1.382692 CCGAACGGAGGGAGTAGGTC 61.383 65.000 7.53 0.00 37.50 3.85
389 390 1.379576 CCGAACGGAGGGAGTAGGT 60.380 63.158 7.53 0.00 37.50 3.08
390 391 0.682209 TTCCGAACGGAGGGAGTAGG 60.682 60.000 15.34 0.00 46.06 3.18
391 392 1.400737 ATTCCGAACGGAGGGAGTAG 58.599 55.000 15.34 0.00 46.06 2.57
392 393 1.856629 AATTCCGAACGGAGGGAGTA 58.143 50.000 15.34 1.05 46.06 2.59
393 394 1.479730 GTAATTCCGAACGGAGGGAGT 59.520 52.381 15.34 4.12 46.06 3.85
394 395 1.755380 AGTAATTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
395 396 1.856629 AGTAATTCCGAACGGAGGGA 58.143 50.000 15.34 2.49 46.06 4.20
396 397 2.277084 CAAGTAATTCCGAACGGAGGG 58.723 52.381 15.34 0.00 46.06 4.30
397 398 2.928116 GACAAGTAATTCCGAACGGAGG 59.072 50.000 15.34 4.52 46.06 4.30
398 399 2.597305 CGACAAGTAATTCCGAACGGAG 59.403 50.000 15.34 5.60 46.06 4.63
399 400 2.030007 ACGACAAGTAATTCCGAACGGA 60.030 45.455 12.04 12.04 43.52 4.69
400 401 2.331194 ACGACAAGTAATTCCGAACGG 58.669 47.619 6.94 6.94 0.00 4.44
401 402 4.406069 TCTACGACAAGTAATTCCGAACG 58.594 43.478 0.00 0.00 34.45 3.95
402 403 6.695292 TTTCTACGACAAGTAATTCCGAAC 57.305 37.500 0.00 0.00 34.45 3.95
403 404 6.311935 CCATTTCTACGACAAGTAATTCCGAA 59.688 38.462 0.00 0.00 34.45 4.30
404 405 5.808540 CCATTTCTACGACAAGTAATTCCGA 59.191 40.000 0.00 0.00 34.45 4.55
405 406 5.808540 TCCATTTCTACGACAAGTAATTCCG 59.191 40.000 0.00 0.00 34.45 4.30
406 407 7.280205 ACATCCATTTCTACGACAAGTAATTCC 59.720 37.037 0.00 0.00 34.45 3.01
407 408 8.197988 ACATCCATTTCTACGACAAGTAATTC 57.802 34.615 0.00 0.00 34.45 2.17
408 409 9.832445 ATACATCCATTTCTACGACAAGTAATT 57.168 29.630 0.00 0.00 34.45 1.40
409 410 9.477484 GATACATCCATTTCTACGACAAGTAAT 57.523 33.333 0.00 0.00 34.45 1.89
410 411 8.692710 AGATACATCCATTTCTACGACAAGTAA 58.307 33.333 0.00 0.00 34.45 2.24
411 412 8.234136 AGATACATCCATTTCTACGACAAGTA 57.766 34.615 0.00 0.00 0.00 2.24
412 413 7.113658 AGATACATCCATTTCTACGACAAGT 57.886 36.000 0.00 0.00 0.00 3.16
413 414 8.568794 TCTAGATACATCCATTTCTACGACAAG 58.431 37.037 0.00 0.00 0.00 3.16
414 415 8.459911 TCTAGATACATCCATTTCTACGACAA 57.540 34.615 0.00 0.00 0.00 3.18
415 416 8.515414 CATCTAGATACATCCATTTCTACGACA 58.485 37.037 4.54 0.00 0.00 4.35
416 417 8.516234 ACATCTAGATACATCCATTTCTACGAC 58.484 37.037 4.54 0.00 0.00 4.34
417 418 8.637196 ACATCTAGATACATCCATTTCTACGA 57.363 34.615 4.54 0.00 0.00 3.43
446 447 9.967346 CTCGAAAATGGATGTATCTAGAACTAA 57.033 33.333 0.00 0.00 0.00 2.24
447 448 9.350951 TCTCGAAAATGGATGTATCTAGAACTA 57.649 33.333 0.00 0.00 0.00 2.24
448 449 8.138712 GTCTCGAAAATGGATGTATCTAGAACT 58.861 37.037 0.00 0.00 0.00 3.01
449 450 7.921214 TGTCTCGAAAATGGATGTATCTAGAAC 59.079 37.037 0.00 0.00 0.00 3.01
450 451 8.007405 TGTCTCGAAAATGGATGTATCTAGAA 57.993 34.615 0.00 0.00 0.00 2.10
451 452 7.582667 TGTCTCGAAAATGGATGTATCTAGA 57.417 36.000 0.00 0.00 0.00 2.43
452 453 7.923344 ACTTGTCTCGAAAATGGATGTATCTAG 59.077 37.037 0.00 0.00 0.00 2.43
453 454 7.782049 ACTTGTCTCGAAAATGGATGTATCTA 58.218 34.615 0.00 0.00 0.00 1.98
454 455 6.644347 ACTTGTCTCGAAAATGGATGTATCT 58.356 36.000 0.00 0.00 0.00 1.98
455 456 6.910536 ACTTGTCTCGAAAATGGATGTATC 57.089 37.500 0.00 0.00 0.00 2.24
456 457 8.964476 ATTACTTGTCTCGAAAATGGATGTAT 57.036 30.769 0.00 0.00 0.00 2.29
457 458 8.786826 AATTACTTGTCTCGAAAATGGATGTA 57.213 30.769 0.00 0.00 0.00 2.29
458 459 7.687941 AATTACTTGTCTCGAAAATGGATGT 57.312 32.000 0.00 0.00 0.00 3.06
459 460 7.846107 CGTAATTACTTGTCTCGAAAATGGATG 59.154 37.037 13.56 0.00 0.00 3.51
460 461 7.762615 TCGTAATTACTTGTCTCGAAAATGGAT 59.237 33.333 13.56 0.00 0.00 3.41
461 462 7.092079 TCGTAATTACTTGTCTCGAAAATGGA 58.908 34.615 13.56 0.00 0.00 3.41
462 463 7.285783 TCGTAATTACTTGTCTCGAAAATGG 57.714 36.000 13.56 0.00 0.00 3.16
463 464 7.418801 CGTTCGTAATTACTTGTCTCGAAAATG 59.581 37.037 13.56 1.54 37.52 2.32
464 465 7.411157 CCGTTCGTAATTACTTGTCTCGAAAAT 60.411 37.037 13.56 0.00 37.52 1.82
465 466 6.129115 CCGTTCGTAATTACTTGTCTCGAAAA 60.129 38.462 13.56 0.00 37.52 2.29
466 467 5.343058 CCGTTCGTAATTACTTGTCTCGAAA 59.657 40.000 13.56 0.00 37.52 3.46
467 468 4.853196 CCGTTCGTAATTACTTGTCTCGAA 59.147 41.667 13.56 7.28 34.38 3.71
468 469 4.154015 TCCGTTCGTAATTACTTGTCTCGA 59.846 41.667 13.56 1.37 0.00 4.04
469 470 4.406069 TCCGTTCGTAATTACTTGTCTCG 58.594 43.478 13.56 8.97 0.00 4.04
470 471 4.797349 CCTCCGTTCGTAATTACTTGTCTC 59.203 45.833 13.56 0.00 0.00 3.36
471 472 4.381292 CCCTCCGTTCGTAATTACTTGTCT 60.381 45.833 13.56 0.00 0.00 3.41
472 473 3.861689 CCCTCCGTTCGTAATTACTTGTC 59.138 47.826 13.56 1.53 0.00 3.18
473 474 3.511146 TCCCTCCGTTCGTAATTACTTGT 59.489 43.478 13.56 0.00 0.00 3.16
474 475 4.110482 CTCCCTCCGTTCGTAATTACTTG 58.890 47.826 13.56 0.00 0.00 3.16
475 476 3.766051 ACTCCCTCCGTTCGTAATTACTT 59.234 43.478 13.56 0.00 0.00 2.24
476 477 3.359950 ACTCCCTCCGTTCGTAATTACT 58.640 45.455 13.56 0.00 0.00 2.24
477 478 3.790152 ACTCCCTCCGTTCGTAATTAC 57.210 47.619 5.47 5.47 0.00 1.89
478 479 3.316308 GCTACTCCCTCCGTTCGTAATTA 59.684 47.826 0.00 0.00 0.00 1.40
479 480 2.100418 GCTACTCCCTCCGTTCGTAATT 59.900 50.000 0.00 0.00 0.00 1.40
480 481 1.680207 GCTACTCCCTCCGTTCGTAAT 59.320 52.381 0.00 0.00 0.00 1.89
481 482 1.098050 GCTACTCCCTCCGTTCGTAA 58.902 55.000 0.00 0.00 0.00 3.18
482 483 0.254178 AGCTACTCCCTCCGTTCGTA 59.746 55.000 0.00 0.00 0.00 3.43
483 484 0.611340 AAGCTACTCCCTCCGTTCGT 60.611 55.000 0.00 0.00 0.00 3.85
484 485 0.100861 GAAGCTACTCCCTCCGTTCG 59.899 60.000 0.00 0.00 0.00 3.95
485 486 0.460722 GGAAGCTACTCCCTCCGTTC 59.539 60.000 0.00 0.00 0.00 3.95
486 487 0.041386 AGGAAGCTACTCCCTCCGTT 59.959 55.000 0.53 0.00 35.95 4.44
487 488 0.041386 AAGGAAGCTACTCCCTCCGT 59.959 55.000 0.53 0.00 35.95 4.69
488 489 1.137282 GAAAGGAAGCTACTCCCTCCG 59.863 57.143 0.53 0.00 35.95 4.63
489 490 1.487142 GGAAAGGAAGCTACTCCCTCC 59.513 57.143 0.53 4.46 35.95 4.30
490 491 2.188817 TGGAAAGGAAGCTACTCCCTC 58.811 52.381 0.53 0.00 35.95 4.30
491 492 2.344093 TGGAAAGGAAGCTACTCCCT 57.656 50.000 0.53 0.00 35.95 4.20
492 493 2.239907 ACATGGAAAGGAAGCTACTCCC 59.760 50.000 0.53 2.64 35.95 4.30
493 494 3.274288 CACATGGAAAGGAAGCTACTCC 58.726 50.000 0.00 0.00 35.51 3.85
494 495 2.680339 GCACATGGAAAGGAAGCTACTC 59.320 50.000 0.00 0.00 0.00 2.59
495 496 2.716217 GCACATGGAAAGGAAGCTACT 58.284 47.619 0.00 0.00 0.00 2.57
496 497 1.398390 CGCACATGGAAAGGAAGCTAC 59.602 52.381 0.00 0.00 0.00 3.58
497 498 1.003118 ACGCACATGGAAAGGAAGCTA 59.997 47.619 0.00 0.00 0.00 3.32
498 499 0.250901 ACGCACATGGAAAGGAAGCT 60.251 50.000 0.00 0.00 0.00 3.74
499 500 0.109597 CACGCACATGGAAAGGAAGC 60.110 55.000 0.00 0.00 0.00 3.86
500 501 0.523072 CCACGCACATGGAAAGGAAG 59.477 55.000 0.00 0.00 43.02 3.46
501 502 0.893270 CCCACGCACATGGAAAGGAA 60.893 55.000 0.00 0.00 43.02 3.36
502 503 1.303236 CCCACGCACATGGAAAGGA 60.303 57.895 0.00 0.00 43.02 3.36
503 504 1.586154 GACCCACGCACATGGAAAGG 61.586 60.000 0.00 0.00 43.02 3.11
504 505 1.586154 GGACCCACGCACATGGAAAG 61.586 60.000 0.00 0.00 43.02 2.62
505 506 1.602323 GGACCCACGCACATGGAAA 60.602 57.895 0.00 0.00 43.02 3.13
506 507 2.033448 GGACCCACGCACATGGAA 59.967 61.111 0.00 0.00 43.02 3.53
507 508 4.386951 CGGACCCACGCACATGGA 62.387 66.667 0.00 0.00 43.02 3.41
509 510 4.697756 ACCGGACCCACGCACATG 62.698 66.667 9.46 0.00 0.00 3.21
510 511 4.697756 CACCGGACCCACGCACAT 62.698 66.667 9.46 0.00 0.00 3.21
515 516 3.755628 ATCGACACCGGACCCACG 61.756 66.667 9.46 6.70 36.24 4.94
516 517 2.125673 CATCGACACCGGACCCAC 60.126 66.667 9.46 0.00 36.24 4.61
517 518 1.261938 ATTCATCGACACCGGACCCA 61.262 55.000 9.46 0.00 36.24 4.51
518 519 0.748450 TATTCATCGACACCGGACCC 59.252 55.000 9.46 0.00 36.24 4.46
519 520 1.849097 GTATTCATCGACACCGGACC 58.151 55.000 9.46 0.00 36.24 4.46
520 521 1.474017 CGTATTCATCGACACCGGAC 58.526 55.000 9.46 0.00 36.24 4.79
521 522 0.382873 CCGTATTCATCGACACCGGA 59.617 55.000 9.46 0.00 36.12 5.14
522 523 1.213094 GCCGTATTCATCGACACCGG 61.213 60.000 0.00 0.00 37.08 5.28
523 524 0.526739 TGCCGTATTCATCGACACCG 60.527 55.000 0.00 0.00 37.07 4.94
524 525 0.928229 GTGCCGTATTCATCGACACC 59.072 55.000 0.00 0.00 36.12 4.16
525 526 0.928229 GGTGCCGTATTCATCGACAC 59.072 55.000 0.00 0.00 39.99 3.67
526 527 0.533032 TGGTGCCGTATTCATCGACA 59.467 50.000 0.00 0.00 0.00 4.35
527 528 1.647346 TTGGTGCCGTATTCATCGAC 58.353 50.000 0.00 0.00 0.00 4.20
528 529 2.388310 TTTGGTGCCGTATTCATCGA 57.612 45.000 0.00 0.00 0.00 3.59
529 530 3.479505 TTTTTGGTGCCGTATTCATCG 57.520 42.857 0.00 0.00 0.00 3.84
548 549 7.551262 TCTGTATTATGTGTGTATCCGCTTTTT 59.449 33.333 0.00 0.00 0.00 1.94
549 550 7.045416 TCTGTATTATGTGTGTATCCGCTTTT 58.955 34.615 0.00 0.00 0.00 2.27
550 551 6.578944 TCTGTATTATGTGTGTATCCGCTTT 58.421 36.000 0.00 0.00 0.00 3.51
551 552 6.156748 TCTGTATTATGTGTGTATCCGCTT 57.843 37.500 0.00 0.00 0.00 4.68
552 553 5.279006 CCTCTGTATTATGTGTGTATCCGCT 60.279 44.000 0.00 0.00 0.00 5.52
553 554 4.923871 CCTCTGTATTATGTGTGTATCCGC 59.076 45.833 0.00 0.00 0.00 5.54
554 555 4.923871 GCCTCTGTATTATGTGTGTATCCG 59.076 45.833 0.00 0.00 0.00 4.18
555 556 5.853936 TGCCTCTGTATTATGTGTGTATCC 58.146 41.667 0.00 0.00 0.00 2.59
556 557 5.406780 GCTGCCTCTGTATTATGTGTGTATC 59.593 44.000 0.00 0.00 0.00 2.24
557 558 5.300752 GCTGCCTCTGTATTATGTGTGTAT 58.699 41.667 0.00 0.00 0.00 2.29
558 559 4.693283 GCTGCCTCTGTATTATGTGTGTA 58.307 43.478 0.00 0.00 0.00 2.90
559 560 3.535561 GCTGCCTCTGTATTATGTGTGT 58.464 45.455 0.00 0.00 0.00 3.72
560 561 2.541346 CGCTGCCTCTGTATTATGTGTG 59.459 50.000 0.00 0.00 0.00 3.82
561 562 2.483714 CCGCTGCCTCTGTATTATGTGT 60.484 50.000 0.00 0.00 0.00 3.72
562 563 2.138320 CCGCTGCCTCTGTATTATGTG 58.862 52.381 0.00 0.00 0.00 3.21
563 564 1.070758 CCCGCTGCCTCTGTATTATGT 59.929 52.381 0.00 0.00 0.00 2.29
564 565 1.609061 CCCCGCTGCCTCTGTATTATG 60.609 57.143 0.00 0.00 0.00 1.90
565 566 0.687354 CCCCGCTGCCTCTGTATTAT 59.313 55.000 0.00 0.00 0.00 1.28
566 567 0.397957 TCCCCGCTGCCTCTGTATTA 60.398 55.000 0.00 0.00 0.00 0.98
567 568 1.056700 ATCCCCGCTGCCTCTGTATT 61.057 55.000 0.00 0.00 0.00 1.89
568 569 1.460305 ATCCCCGCTGCCTCTGTAT 60.460 57.895 0.00 0.00 0.00 2.29
569 570 2.041922 ATCCCCGCTGCCTCTGTA 60.042 61.111 0.00 0.00 0.00 2.74
570 571 3.474570 GATCCCCGCTGCCTCTGT 61.475 66.667 0.00 0.00 0.00 3.41
571 572 4.247380 GGATCCCCGCTGCCTCTG 62.247 72.222 0.00 0.00 0.00 3.35
572 573 4.804420 TGGATCCCCGCTGCCTCT 62.804 66.667 9.90 0.00 34.29 3.69
573 574 4.554036 GTGGATCCCCGCTGCCTC 62.554 72.222 9.90 0.00 39.82 4.70
575 576 4.195334 ATGTGGATCCCCGCTGCC 62.195 66.667 9.90 0.00 43.32 4.85
576 577 2.903855 CATGTGGATCCCCGCTGC 60.904 66.667 9.90 0.00 43.32 5.25
577 578 2.203252 CCATGTGGATCCCCGCTG 60.203 66.667 9.90 0.00 43.32 5.18
578 579 4.195334 GCCATGTGGATCCCCGCT 62.195 66.667 9.90 0.00 43.32 5.52
582 583 4.504596 TGGCGCCATGTGGATCCC 62.505 66.667 29.03 0.85 37.39 3.85
583 584 2.903855 CTGGCGCCATGTGGATCC 60.904 66.667 32.87 4.20 37.39 3.36
584 585 2.903855 CCTGGCGCCATGTGGATC 60.904 66.667 32.87 0.00 37.39 3.36
585 586 3.410628 TCCTGGCGCCATGTGGAT 61.411 61.111 32.87 0.00 37.39 3.41
586 587 4.408821 GTCCTGGCGCCATGTGGA 62.409 66.667 32.87 29.59 37.39 4.02
590 591 4.552365 ATCCGTCCTGGCGCCATG 62.552 66.667 32.87 28.09 37.80 3.66
591 592 4.552365 CATCCGTCCTGGCGCCAT 62.552 66.667 32.87 10.76 37.80 4.40
593 594 4.899239 CTCATCCGTCCTGGCGCC 62.899 72.222 22.73 22.73 37.80 6.53
594 595 1.806461 TATCTCATCCGTCCTGGCGC 61.806 60.000 0.00 0.00 37.80 6.53
595 596 0.039074 GTATCTCATCCGTCCTGGCG 60.039 60.000 3.95 3.95 37.80 5.69
596 597 0.318762 GGTATCTCATCCGTCCTGGC 59.681 60.000 0.00 0.00 37.80 4.85
597 598 0.598562 CGGTATCTCATCCGTCCTGG 59.401 60.000 0.00 0.00 41.58 4.45
598 599 0.598562 CCGGTATCTCATCCGTCCTG 59.401 60.000 0.00 0.00 44.51 3.86
599 600 1.179814 GCCGGTATCTCATCCGTCCT 61.180 60.000 1.90 0.00 44.51 3.85
600 601 1.289380 GCCGGTATCTCATCCGTCC 59.711 63.158 1.90 0.00 44.51 4.79
601 602 1.289380 GGCCGGTATCTCATCCGTC 59.711 63.158 1.90 0.00 44.51 4.79
602 603 2.561956 CGGCCGGTATCTCATCCGT 61.562 63.158 20.10 0.00 44.51 4.69
603 604 2.258591 CGGCCGGTATCTCATCCG 59.741 66.667 20.10 0.00 45.42 4.18
604 605 2.657237 CCGGCCGGTATCTCATCC 59.343 66.667 36.64 0.00 0.00 3.51
605 606 2.048127 GCCGGCCGGTATCTCATC 60.048 66.667 42.53 21.64 37.65 2.92
606 607 3.626924 GGCCGGCCGGTATCTCAT 61.627 66.667 42.53 0.00 37.65 2.90
607 608 4.853142 AGGCCGGCCGGTATCTCA 62.853 66.667 42.53 0.00 41.95 3.27
608 609 4.301027 CAGGCCGGCCGGTATCTC 62.301 72.222 42.53 26.58 41.95 2.75
638 639 3.276882 AGTAACCGAAAAATGCCAACG 57.723 42.857 0.00 0.00 0.00 4.10
639 640 4.208253 CACAAGTAACCGAAAAATGCCAAC 59.792 41.667 0.00 0.00 0.00 3.77
640 641 4.363999 CACAAGTAACCGAAAAATGCCAA 58.636 39.130 0.00 0.00 0.00 4.52
641 642 3.797184 GCACAAGTAACCGAAAAATGCCA 60.797 43.478 0.00 0.00 0.00 4.92
642 643 2.729360 GCACAAGTAACCGAAAAATGCC 59.271 45.455 0.00 0.00 0.00 4.40
643 644 2.729360 GGCACAAGTAACCGAAAAATGC 59.271 45.455 0.00 0.00 0.00 3.56
644 645 3.005367 AGGGCACAAGTAACCGAAAAATG 59.995 43.478 0.00 0.00 0.00 2.32
645 646 3.227614 AGGGCACAAGTAACCGAAAAAT 58.772 40.909 0.00 0.00 0.00 1.82
646 647 2.657143 AGGGCACAAGTAACCGAAAAA 58.343 42.857 0.00 0.00 0.00 1.94
647 648 2.351706 AGGGCACAAGTAACCGAAAA 57.648 45.000 0.00 0.00 0.00 2.29
648 649 2.351706 AAGGGCACAAGTAACCGAAA 57.648 45.000 0.00 0.00 0.00 3.46
649 650 3.706600 ATAAGGGCACAAGTAACCGAA 57.293 42.857 0.00 0.00 0.00 4.30
650 651 6.482898 TTATATAAGGGCACAAGTAACCGA 57.517 37.500 0.00 0.00 0.00 4.69
651 652 7.739498 ATTTATATAAGGGCACAAGTAACCG 57.261 36.000 0.00 0.00 0.00 4.44
672 673 9.601217 AGCTCGTGACTTGAGTATAATTTATTT 57.399 29.630 0.00 0.00 35.85 1.40
673 674 9.035607 CAGCTCGTGACTTGAGTATAATTTATT 57.964 33.333 0.00 0.00 35.85 1.40
677 678 5.967088 ACAGCTCGTGACTTGAGTATAATT 58.033 37.500 0.00 0.00 35.85 1.40
691 692 5.572126 GGTAAAGTAGTAAGAACAGCTCGTG 59.428 44.000 0.00 0.00 0.00 4.35
705 706 8.524487 CAGAGACTCTTGTATTGGTAAAGTAGT 58.476 37.037 0.98 0.00 0.00 2.73
713 714 4.040952 ACTTGCAGAGACTCTTGTATTGGT 59.959 41.667 0.98 0.00 0.00 3.67
753 754 6.601332 CCTGCCTGGAGAAATAATTTACCTA 58.399 40.000 0.00 0.00 38.35 3.08
780 781 7.630082 TGATTGATTAGGTAAAGCTACTGGTT 58.370 34.615 0.00 0.00 35.14 3.67
786 787 6.003950 GGCCATGATTGATTAGGTAAAGCTA 58.996 40.000 0.00 0.00 0.00 3.32
805 809 2.042639 GGCAACCTCCATGGCCAT 60.043 61.111 14.09 14.09 45.70 4.40
906 926 2.765135 CCTCTCCATCAGCTCTTCTTGA 59.235 50.000 0.00 0.00 0.00 3.02
907 927 2.500910 ACCTCTCCATCAGCTCTTCTTG 59.499 50.000 0.00 0.00 0.00 3.02
944 1269 1.920574 CAACGACCATGCTTACTCTCG 59.079 52.381 0.00 0.00 0.00 4.04
1136 1567 4.261197 GCTTGAGGGGAATTGCTAAATACG 60.261 45.833 0.00 0.00 0.00 3.06
1166 1597 5.924356 TGTCATCCTTCTCAGTTGTTGTTA 58.076 37.500 0.00 0.00 0.00 2.41
1547 5436 2.775960 AGCATCTTCATCCCAGACATGA 59.224 45.455 0.00 0.00 0.00 3.07
2027 6312 3.649981 AGGTATCATGCTAAGTGGATGCT 59.350 43.478 0.00 0.00 43.11 3.79
2063 6354 6.723052 ACTTGGTGATTCCTTCTTGATTGAAT 59.277 34.615 0.00 0.00 37.07 2.57
2154 6514 1.856920 GGGGGTATCCTTGATTCCCAA 59.143 52.381 17.35 0.00 47.00 4.12
2212 6756 3.099905 CACTCCCTTCATCTGTGTCCTA 58.900 50.000 0.00 0.00 0.00 2.94
2338 7368 8.385898 TCACTCCTTAAATTTGTATGTTCGTT 57.614 30.769 0.00 0.00 0.00 3.85
2746 7780 7.100409 TCATTCAATGATCAATGCAATTGTGT 58.900 30.769 5.85 0.00 43.82 3.72
2856 7899 8.787852 AGAGAATAATGTGTTTCTCCTGTTTTC 58.212 33.333 8.61 0.00 45.83 2.29
2908 7951 1.091771 CCCGATGCACATGGTCACTC 61.092 60.000 0.00 0.00 0.00 3.51
2941 7984 8.335532 ACAAGAATGAAAGGATAAATGACGAA 57.664 30.769 0.00 0.00 0.00 3.85
3075 8118 2.298163 GCCCCCGAATTTCTAGATACGA 59.702 50.000 0.00 0.00 0.00 3.43
3076 8119 2.612221 GGCCCCCGAATTTCTAGATACG 60.612 54.545 0.00 0.00 0.00 3.06
3079 8126 0.771755 GGGCCCCCGAATTTCTAGAT 59.228 55.000 12.23 0.00 0.00 1.98


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.