Multiple sequence alignment - TraesCS2B01G025600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G025600 chr2B 100.000 3398 0 0 1 3398 11726271 11722874 0.000000e+00 6276.0
1 TraesCS2B01G025600 chr2B 83.495 1339 185 20 825 2144 11226609 11225288 0.000000e+00 1216.0
2 TraesCS2B01G025600 chr2B 80.337 1307 232 17 857 2149 13068658 13067363 0.000000e+00 966.0
3 TraesCS2B01G025600 chr2B 79.553 1208 227 16 938 2138 13131589 13130395 0.000000e+00 845.0
4 TraesCS2B01G025600 chr2D 96.937 1567 46 1 744 2308 9251774 9253340 0.000000e+00 2627.0
5 TraesCS2B01G025600 chr2D 87.314 1277 154 7 936 2207 9380383 9381656 0.000000e+00 1454.0
6 TraesCS2B01G025600 chr2D 84.081 1338 195 12 817 2144 8479527 8478198 0.000000e+00 1275.0
7 TraesCS2B01G025600 chr2D 83.184 1225 191 11 927 2145 9588223 9589438 0.000000e+00 1107.0
8 TraesCS2B01G025600 chr2D 90.604 298 26 2 2664 2961 9254971 9255266 8.840000e-106 394.0
9 TraesCS2B01G025600 chr2D 92.070 227 16 2 3025 3251 9255391 9255615 5.470000e-83 318.0
10 TraesCS2B01G025600 chr2D 92.188 192 14 1 1 192 9250964 9251154 1.550000e-68 270.0
11 TraesCS2B01G025600 chr2D 91.878 197 7 4 331 519 9251242 9251437 2.010000e-67 267.0
12 TraesCS2B01G025600 chr2D 93.421 152 10 0 3247 3398 9257838 9257989 3.410000e-55 226.0
13 TraesCS2B01G025600 chr2D 94.815 135 7 0 505 639 9251457 9251591 9.550000e-51 211.0
14 TraesCS2B01G025600 chr2D 96.552 116 3 1 636 751 9251638 9251752 1.240000e-44 191.0
15 TraesCS2B01G025600 chr2D 96.154 104 4 0 2294 2397 9254876 9254979 1.620000e-38 171.0
16 TraesCS2B01G025600 chr2D 89.256 121 13 0 2240 2360 9319696 9319816 5.870000e-33 152.0
17 TraesCS2B01G025600 chr2A 86.725 1484 174 12 744 2207 8630689 8632169 0.000000e+00 1628.0
18 TraesCS2B01G025600 chr2A 81.897 1160 199 6 991 2149 9094492 9093343 0.000000e+00 968.0
19 TraesCS2B01G025600 chr2A 89.305 187 20 0 2209 2395 8632138 8632324 5.670000e-58 235.0
20 TraesCS2B01G025600 chr4D 82.744 1217 192 12 936 2146 464204547 464205751 0.000000e+00 1068.0
21 TraesCS2B01G025600 chr6A 98.955 287 3 0 2395 2681 38758093 38757807 6.500000e-142 514.0
22 TraesCS2B01G025600 chr3A 98.929 280 3 0 2394 2673 57206554 57206275 5.060000e-138 501.0
23 TraesCS2B01G025600 chr1B 98.929 280 3 0 2394 2673 660082336 660082057 5.060000e-138 501.0
24 TraesCS2B01G025600 chr4A 98.582 282 4 0 2397 2678 179068042 179067761 1.820000e-137 499.0
25 TraesCS2B01G025600 chr4A 94.872 39 1 1 2924 2961 650412990 650413028 3.660000e-05 60.2
26 TraesCS2B01G025600 chr4A 96.970 33 1 0 2924 2956 428145576 428145544 4.740000e-04 56.5
27 TraesCS2B01G025600 chr3B 98.925 279 3 0 2393 2671 662015610 662015888 1.820000e-137 499.0
28 TraesCS2B01G025600 chr3B 80.000 95 9 5 2924 3018 161129532 161129616 1.020000e-05 62.1
29 TraesCS2B01G025600 chr3B 96.970 33 1 0 2924 2956 181678816 181678848 4.740000e-04 56.5
30 TraesCS2B01G025600 chr6B 98.246 285 3 2 2396 2679 42653707 42653990 6.550000e-137 497.0
31 TraesCS2B01G025600 chr6B 98.582 282 3 1 2392 2673 347118525 347118245 6.550000e-137 497.0
32 TraesCS2B01G025600 chr6B 98.233 283 5 0 2392 2674 143176387 143176105 2.360000e-136 496.0
33 TraesCS2B01G025600 chr6B 92.105 38 3 0 2922 2959 703544953 703544916 2.000000e-03 54.7
34 TraesCS2B01G025600 chr6B 100.000 28 0 0 2991 3018 631999734 631999707 6.000000e-03 52.8
35 TraesCS2B01G025600 chr1A 98.239 284 5 0 2395 2678 586429878 586430161 6.550000e-137 497.0
36 TraesCS2B01G025600 chr5B 81.373 102 9 4 2924 3025 17545617 17545708 1.310000e-09 75.0
37 TraesCS2B01G025600 chr5B 91.892 37 3 0 2923 2959 222375832 222375796 6.000000e-03 52.8
38 TraesCS2B01G025600 chr1D 96.970 33 1 0 2986 3018 356410107 356410075 4.740000e-04 56.5
39 TraesCS2B01G025600 chr6D 87.755 49 2 1 2969 3017 295046646 295046690 2.000000e-03 54.7
40 TraesCS2B01G025600 chr5A 92.105 38 3 0 2922 2959 400392174 400392137 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G025600 chr2B 11722874 11726271 3397 True 6276.000000 6276 100.000000 1 3398 1 chr2B.!!$R2 3397
1 TraesCS2B01G025600 chr2B 11225288 11226609 1321 True 1216.000000 1216 83.495000 825 2144 1 chr2B.!!$R1 1319
2 TraesCS2B01G025600 chr2B 13067363 13068658 1295 True 966.000000 966 80.337000 857 2149 1 chr2B.!!$R3 1292
3 TraesCS2B01G025600 chr2B 13130395 13131589 1194 True 845.000000 845 79.553000 938 2138 1 chr2B.!!$R4 1200
4 TraesCS2B01G025600 chr2D 9380383 9381656 1273 False 1454.000000 1454 87.314000 936 2207 1 chr2D.!!$F2 1271
5 TraesCS2B01G025600 chr2D 8478198 8479527 1329 True 1275.000000 1275 84.081000 817 2144 1 chr2D.!!$R1 1327
6 TraesCS2B01G025600 chr2D 9588223 9589438 1215 False 1107.000000 1107 83.184000 927 2145 1 chr2D.!!$F3 1218
7 TraesCS2B01G025600 chr2D 9250964 9257989 7025 False 519.444444 2627 93.846556 1 3398 9 chr2D.!!$F4 3397
8 TraesCS2B01G025600 chr2A 9093343 9094492 1149 True 968.000000 968 81.897000 991 2149 1 chr2A.!!$R1 1158
9 TraesCS2B01G025600 chr2A 8630689 8632324 1635 False 931.500000 1628 88.015000 744 2395 2 chr2A.!!$F1 1651
10 TraesCS2B01G025600 chr4D 464204547 464205751 1204 False 1068.000000 1068 82.744000 936 2146 1 chr4D.!!$F1 1210

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
366 367 0.106708 ATCCATTGGTCATCGGTCGG 59.893 55.0 1.86 0.0 0.00 4.79 F
1472 1616 0.455815 TGTGAGCGCATGTCTCGTAT 59.544 50.0 11.47 0.0 33.41 3.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2296 2444 1.014352 AACGTCACACTTGGCAGTTC 58.986 50.0 0.0 0.0 0.0 3.01 R
2511 4209 0.034756 TGGAGTGTGTGATGTTCCGG 59.965 55.0 0.0 0.0 0.0 5.14 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
42 43 0.618458 TGTAGGTTTAGGCAGCAGGG 59.382 55.000 0.00 0.00 0.00 4.45
87 88 0.955428 GGCTGCCGTGAGATTTGTCA 60.955 55.000 1.35 0.00 0.00 3.58
92 93 1.877637 CCGTGAGATTTGTCACACCA 58.122 50.000 8.36 0.00 46.19 4.17
95 96 3.130633 CGTGAGATTTGTCACACCAAGA 58.869 45.455 8.36 0.00 46.19 3.02
100 101 6.473455 GTGAGATTTGTCACACCAAGAAAAAG 59.527 38.462 3.20 0.00 45.34 2.27
110 111 6.887545 TCACACCAAGAAAAAGGAGAAAAGTA 59.112 34.615 0.00 0.00 0.00 2.24
165 166 5.598416 GCCCTTGGCTATAAGTTTTCATT 57.402 39.130 0.00 0.00 46.69 2.57
167 168 5.812127 GCCCTTGGCTATAAGTTTTCATTTG 59.188 40.000 0.00 0.00 46.69 2.32
168 169 6.574269 GCCCTTGGCTATAAGTTTTCATTTGT 60.574 38.462 0.00 0.00 46.69 2.83
170 171 7.378181 CCTTGGCTATAAGTTTTCATTTGTGT 58.622 34.615 0.00 0.00 0.00 3.72
179 180 7.524294 AAGTTTTCATTTGTGTGTGTTCATC 57.476 32.000 0.00 0.00 0.00 2.92
182 183 4.208074 TCATTTGTGTGTGTTCATCGTG 57.792 40.909 0.00 0.00 0.00 4.35
187 188 4.208074 TGTGTGTGTTCATCGTGATTTG 57.792 40.909 0.00 0.00 0.00 2.32
192 193 5.698545 TGTGTGTTCATCGTGATTTGATGTA 59.301 36.000 3.21 0.00 42.96 2.29
194 195 7.075121 GTGTGTTCATCGTGATTTGATGTAAA 58.925 34.615 3.21 0.00 42.96 2.01
195 196 7.589587 GTGTGTTCATCGTGATTTGATGTAAAA 59.410 33.333 3.21 0.00 42.96 1.52
196 197 8.296000 TGTGTTCATCGTGATTTGATGTAAAAT 58.704 29.630 3.21 0.00 42.96 1.82
197 198 8.577939 GTGTTCATCGTGATTTGATGTAAAATG 58.422 33.333 3.21 0.00 42.96 2.32
199 200 9.767684 GTTCATCGTGATTTGATGTAAAATGTA 57.232 29.630 3.21 0.00 42.96 2.29
200 201 9.986833 TTCATCGTGATTTGATGTAAAATGTAG 57.013 29.630 3.21 0.00 42.96 2.74
202 203 8.611757 CATCGTGATTTGATGTAAAATGTAGGA 58.388 33.333 0.00 0.00 38.69 2.94
204 205 8.038351 TCGTGATTTGATGTAAAATGTAGGAGA 58.962 33.333 0.00 0.00 29.89 3.71
205 206 8.116753 CGTGATTTGATGTAAAATGTAGGAGAC 58.883 37.037 0.00 0.00 29.89 3.36
207 208 7.556275 TGATTTGATGTAAAATGTAGGAGACCC 59.444 37.037 0.00 0.00 29.89 4.46
208 209 6.381498 TTGATGTAAAATGTAGGAGACCCA 57.619 37.500 0.00 0.00 33.88 4.51
209 210 5.741011 TGATGTAAAATGTAGGAGACCCAC 58.259 41.667 0.00 0.00 33.88 4.61
211 212 5.570205 TGTAAAATGTAGGAGACCCACAA 57.430 39.130 0.00 0.00 33.88 3.33
212 213 5.942961 TGTAAAATGTAGGAGACCCACAAA 58.057 37.500 0.00 0.00 33.88 2.83
214 215 4.447138 AAATGTAGGAGACCCACAAACA 57.553 40.909 0.00 0.00 33.88 2.83
215 216 3.703001 ATGTAGGAGACCCACAAACAG 57.297 47.619 0.00 0.00 33.88 3.16
217 218 3.042682 TGTAGGAGACCCACAAACAGAA 58.957 45.455 0.00 0.00 33.88 3.02
220 221 4.993705 AGGAGACCCACAAACAGAAATA 57.006 40.909 0.00 0.00 33.88 1.40
221 222 4.652822 AGGAGACCCACAAACAGAAATAC 58.347 43.478 0.00 0.00 33.88 1.89
222 223 4.351111 AGGAGACCCACAAACAGAAATACT 59.649 41.667 0.00 0.00 33.88 2.12
223 224 5.546499 AGGAGACCCACAAACAGAAATACTA 59.454 40.000 0.00 0.00 33.88 1.82
224 225 6.043938 AGGAGACCCACAAACAGAAATACTAA 59.956 38.462 0.00 0.00 33.88 2.24
226 227 7.074653 AGACCCACAAACAGAAATACTAAGA 57.925 36.000 0.00 0.00 0.00 2.10
227 228 7.690256 AGACCCACAAACAGAAATACTAAGAT 58.310 34.615 0.00 0.00 0.00 2.40
228 229 7.607991 AGACCCACAAACAGAAATACTAAGATG 59.392 37.037 0.00 0.00 0.00 2.90
229 230 7.458397 ACCCACAAACAGAAATACTAAGATGA 58.542 34.615 0.00 0.00 0.00 2.92
230 231 8.109634 ACCCACAAACAGAAATACTAAGATGAT 58.890 33.333 0.00 0.00 0.00 2.45
276 277 9.920946 ATTAATTTGGACATAACTACCATGAGT 57.079 29.630 0.00 0.00 33.56 3.41
293 294 8.588290 ACCATGAGTATTAAAAATACAAGCCA 57.412 30.769 11.30 5.22 0.00 4.75
294 295 9.200817 ACCATGAGTATTAAAAATACAAGCCAT 57.799 29.630 11.30 6.79 0.00 4.40
321 322 8.865590 TTTTTCAGGTTGCTTAGACAATTAAC 57.134 30.769 0.00 0.00 0.00 2.01
322 323 7.817418 TTTCAGGTTGCTTAGACAATTAACT 57.183 32.000 0.00 0.00 0.00 2.24
323 324 7.817418 TTCAGGTTGCTTAGACAATTAACTT 57.183 32.000 0.00 0.00 0.00 2.66
324 325 7.435068 TCAGGTTGCTTAGACAATTAACTTC 57.565 36.000 0.00 0.00 0.00 3.01
325 326 6.430000 TCAGGTTGCTTAGACAATTAACTTCC 59.570 38.462 0.00 0.00 0.00 3.46
326 327 5.710567 AGGTTGCTTAGACAATTAACTTCCC 59.289 40.000 0.00 0.00 0.00 3.97
327 328 5.710567 GGTTGCTTAGACAATTAACTTCCCT 59.289 40.000 0.00 0.00 0.00 4.20
328 329 6.208797 GGTTGCTTAGACAATTAACTTCCCTT 59.791 38.462 0.00 0.00 0.00 3.95
329 330 7.392393 GGTTGCTTAGACAATTAACTTCCCTTA 59.608 37.037 0.00 0.00 0.00 2.69
330 331 8.957466 GTTGCTTAGACAATTAACTTCCCTTAT 58.043 33.333 0.00 0.00 0.00 1.73
331 332 8.506168 TGCTTAGACAATTAACTTCCCTTATG 57.494 34.615 0.00 0.00 0.00 1.90
332 333 8.325787 TGCTTAGACAATTAACTTCCCTTATGA 58.674 33.333 0.00 0.00 0.00 2.15
333 334 9.343539 GCTTAGACAATTAACTTCCCTTATGAT 57.656 33.333 0.00 0.00 0.00 2.45
340 341 2.906354 ACTTCCCTTATGATCACACGC 58.094 47.619 0.00 0.00 0.00 5.34
348 349 2.425143 ATGATCACACGCCCTTGAAT 57.575 45.000 0.00 0.00 0.00 2.57
353 354 1.176527 CACACGCCCTTGAATCCATT 58.823 50.000 0.00 0.00 0.00 3.16
359 360 2.391678 GCCCTTGAATCCATTGGTCAT 58.608 47.619 1.86 0.00 0.00 3.06
360 361 2.363359 GCCCTTGAATCCATTGGTCATC 59.637 50.000 1.86 0.88 0.00 2.92
364 365 2.917933 TGAATCCATTGGTCATCGGTC 58.082 47.619 1.86 0.00 0.00 4.79
365 366 1.867233 GAATCCATTGGTCATCGGTCG 59.133 52.381 1.86 0.00 0.00 4.79
366 367 0.106708 ATCCATTGGTCATCGGTCGG 59.893 55.000 1.86 0.00 0.00 4.79
407 415 4.387026 AGGATTCAAACATCCCAGAACA 57.613 40.909 0.00 0.00 43.68 3.18
593 636 0.539051 GCTACCTGCTGGACATGTCT 59.461 55.000 24.50 6.29 38.95 3.41
610 653 1.659098 GTCTTTCCAGGCACGATTACG 59.341 52.381 0.00 0.00 45.75 3.18
627 670 7.161829 CGATTACGTACTGAAATTAGCACAT 57.838 36.000 0.00 0.00 34.56 3.21
631 674 3.242739 CGTACTGAAATTAGCACATGGCC 60.243 47.826 0.00 0.00 46.50 5.36
675 767 2.202864 GAAGGAGCTCGCCTCTGC 60.203 66.667 7.83 0.00 40.57 4.26
715 807 3.823873 ACCCTCGCATGTGAAATGTAAAA 59.176 39.130 10.71 0.00 0.00 1.52
725 817 7.432869 CATGTGAAATGTAAAAGGAGTCCAAA 58.567 34.615 12.86 0.00 0.00 3.28
910 1039 2.424956 GCAGTCAAAATCATCCCTGGAC 59.575 50.000 0.00 0.00 0.00 4.02
919 1048 3.423539 TCATCCCTGGACACTTTTCTG 57.576 47.619 0.00 0.00 0.00 3.02
1149 1290 3.808466 CTGCTAATGAGAGCTGGTACA 57.192 47.619 0.00 0.00 43.27 2.90
1230 1371 0.678395 CGCTCTCAGAGGCCATGTAT 59.322 55.000 5.01 0.00 0.00 2.29
1231 1372 1.889170 CGCTCTCAGAGGCCATGTATA 59.111 52.381 5.01 0.00 0.00 1.47
1472 1616 0.455815 TGTGAGCGCATGTCTCGTAT 59.544 50.000 11.47 0.00 33.41 3.06
1665 1810 2.435938 TGCGGCGATGAAAGGGTC 60.436 61.111 12.98 0.00 0.00 4.46
1703 1848 4.264253 TCTGTATTGCACTTGAATGGAGG 58.736 43.478 0.00 0.00 0.00 4.30
1725 1870 4.866486 GGCAGCCTTTTGAAAATATGTGAG 59.134 41.667 3.29 0.00 0.00 3.51
1775 1920 7.341445 TGTTGGTAGTTATTGAGTTTGCTTT 57.659 32.000 0.00 0.00 0.00 3.51
1792 1937 5.973651 TGCTTTTGATGTAGATGACGATC 57.026 39.130 0.00 0.00 0.00 3.69
2041 2186 1.308069 GCACAGTGCGGATGGTTCAT 61.308 55.000 10.47 0.00 31.71 2.57
2124 2269 4.675510 GTTGCATATTGGACAAGGTGATG 58.324 43.478 0.00 1.17 0.00 3.07
2149 2294 5.589050 AGATATGTTAAAAGAAACCTCGCCC 59.411 40.000 0.00 0.00 0.00 6.13
2352 4050 4.566987 CAGACCCTACTGTTAGACCAAAC 58.433 47.826 0.00 0.00 33.73 2.93
2377 4075 8.265055 ACGGAGACTTTAATCTAATTTCATGGA 58.735 33.333 0.00 0.00 0.00 3.41
2391 4089 6.639632 ATTTCATGGAAATCAAGGATACCG 57.360 37.500 0.00 0.00 37.68 4.02
2392 4090 3.476552 TCATGGAAATCAAGGATACCGC 58.523 45.455 0.00 0.00 37.17 5.68
2393 4091 2.341846 TGGAAATCAAGGATACCGCC 57.658 50.000 0.00 0.00 37.17 6.13
2394 4092 1.843851 TGGAAATCAAGGATACCGCCT 59.156 47.619 0.00 0.00 40.93 5.52
2396 4094 3.456644 TGGAAATCAAGGATACCGCCTTA 59.543 43.478 0.00 0.00 46.29 2.69
2397 4095 4.065789 GGAAATCAAGGATACCGCCTTAG 58.934 47.826 0.00 0.00 46.29 2.18
2398 4096 3.771577 AATCAAGGATACCGCCTTAGG 57.228 47.619 0.00 0.00 46.29 2.69
2399 4097 0.756903 TCAAGGATACCGCCTTAGGC 59.243 55.000 14.22 14.22 46.29 3.93
2404 4102 0.033642 GATACCGCCTTAGGCTGGTC 59.966 60.000 31.52 20.10 46.52 4.02
2405 4103 0.689745 ATACCGCCTTAGGCTGGTCA 60.690 55.000 31.52 21.64 46.52 4.02
2406 4104 1.610554 TACCGCCTTAGGCTGGTCAC 61.611 60.000 31.52 1.91 46.52 3.67
2409 4107 3.577389 GCCTTAGGCTGGTCACAAT 57.423 52.632 17.16 0.00 46.69 2.71
2410 4108 1.098050 GCCTTAGGCTGGTCACAATG 58.902 55.000 17.16 0.00 46.69 2.82
2411 4109 1.755179 CCTTAGGCTGGTCACAATGG 58.245 55.000 0.00 0.00 0.00 3.16
2412 4110 1.683011 CCTTAGGCTGGTCACAATGGG 60.683 57.143 0.00 0.00 0.00 4.00
2413 4111 0.331278 TTAGGCTGGTCACAATGGGG 59.669 55.000 0.00 0.00 0.00 4.96
2414 4112 0.548926 TAGGCTGGTCACAATGGGGA 60.549 55.000 0.00 0.00 0.00 4.81
2415 4113 1.379044 GGCTGGTCACAATGGGGAG 60.379 63.158 0.00 0.00 0.00 4.30
2416 4114 1.379044 GCTGGTCACAATGGGGAGG 60.379 63.158 0.00 0.00 0.00 4.30
2417 4115 1.852157 GCTGGTCACAATGGGGAGGA 61.852 60.000 0.00 0.00 0.00 3.71
2418 4116 0.698238 CTGGTCACAATGGGGAGGAA 59.302 55.000 0.00 0.00 0.00 3.36
2419 4117 1.285962 CTGGTCACAATGGGGAGGAAT 59.714 52.381 0.00 0.00 0.00 3.01
2420 4118 1.715931 TGGTCACAATGGGGAGGAATT 59.284 47.619 0.00 0.00 0.00 2.17
2421 4119 2.111613 TGGTCACAATGGGGAGGAATTT 59.888 45.455 0.00 0.00 0.00 1.82
2422 4120 3.335183 TGGTCACAATGGGGAGGAATTTA 59.665 43.478 0.00 0.00 0.00 1.40
2423 4121 3.954258 GGTCACAATGGGGAGGAATTTAG 59.046 47.826 0.00 0.00 0.00 1.85
2424 4122 3.954258 GTCACAATGGGGAGGAATTTAGG 59.046 47.826 0.00 0.00 0.00 2.69
2425 4123 3.855599 TCACAATGGGGAGGAATTTAGGA 59.144 43.478 0.00 0.00 0.00 2.94
2426 4124 4.079787 TCACAATGGGGAGGAATTTAGGAG 60.080 45.833 0.00 0.00 0.00 3.69
2427 4125 3.858638 ACAATGGGGAGGAATTTAGGAGT 59.141 43.478 0.00 0.00 0.00 3.85
2428 4126 5.043762 ACAATGGGGAGGAATTTAGGAGTA 58.956 41.667 0.00 0.00 0.00 2.59
2429 4127 5.494706 ACAATGGGGAGGAATTTAGGAGTAA 59.505 40.000 0.00 0.00 0.00 2.24
2430 4128 5.648330 ATGGGGAGGAATTTAGGAGTAAC 57.352 43.478 0.00 0.00 0.00 2.50
2431 4129 4.440808 TGGGGAGGAATTTAGGAGTAACA 58.559 43.478 0.00 0.00 0.00 2.41
2432 4130 5.043762 TGGGGAGGAATTTAGGAGTAACAT 58.956 41.667 0.00 0.00 0.00 2.71
2433 4131 5.132144 TGGGGAGGAATTTAGGAGTAACATC 59.868 44.000 0.00 0.00 0.00 3.06
2434 4132 5.132144 GGGGAGGAATTTAGGAGTAACATCA 59.868 44.000 0.00 0.00 0.00 3.07
2435 4133 6.056236 GGGAGGAATTTAGGAGTAACATCAC 58.944 44.000 0.00 0.00 0.00 3.06
2436 4134 6.352737 GGGAGGAATTTAGGAGTAACATCACA 60.353 42.308 0.00 0.00 0.00 3.58
2437 4135 6.539103 GGAGGAATTTAGGAGTAACATCACAC 59.461 42.308 0.00 0.00 0.00 3.82
2438 4136 7.016153 AGGAATTTAGGAGTAACATCACACA 57.984 36.000 0.00 0.00 0.00 3.72
2439 4137 6.879458 AGGAATTTAGGAGTAACATCACACAC 59.121 38.462 0.00 0.00 0.00 3.82
2440 4138 6.879458 GGAATTTAGGAGTAACATCACACACT 59.121 38.462 0.00 0.00 0.00 3.55
2441 4139 7.064728 GGAATTTAGGAGTAACATCACACACTC 59.935 40.741 0.00 0.00 37.32 3.51
2447 4145 6.648725 GAGTAACATCACACACTCCAATAC 57.351 41.667 0.00 0.00 32.93 1.89
2448 4146 6.109156 AGTAACATCACACACTCCAATACA 57.891 37.500 0.00 0.00 0.00 2.29
2449 4147 6.530120 AGTAACATCACACACTCCAATACAA 58.470 36.000 0.00 0.00 0.00 2.41
2450 4148 5.689383 AACATCACACACTCCAATACAAC 57.311 39.130 0.00 0.00 0.00 3.32
2451 4149 4.973168 ACATCACACACTCCAATACAACT 58.027 39.130 0.00 0.00 0.00 3.16
2452 4150 5.376625 ACATCACACACTCCAATACAACTT 58.623 37.500 0.00 0.00 0.00 2.66
2453 4151 5.827797 ACATCACACACTCCAATACAACTTT 59.172 36.000 0.00 0.00 0.00 2.66
2454 4152 5.749596 TCACACACTCCAATACAACTTTG 57.250 39.130 0.00 0.00 0.00 2.77
2455 4153 4.036262 TCACACACTCCAATACAACTTTGC 59.964 41.667 0.00 0.00 0.00 3.68
2456 4154 4.036734 CACACACTCCAATACAACTTTGCT 59.963 41.667 0.00 0.00 0.00 3.91
2457 4155 4.644685 ACACACTCCAATACAACTTTGCTT 59.355 37.500 0.00 0.00 0.00 3.91
2458 4156 5.825679 ACACACTCCAATACAACTTTGCTTA 59.174 36.000 0.00 0.00 0.00 3.09
2459 4157 6.490040 ACACACTCCAATACAACTTTGCTTAT 59.510 34.615 0.00 0.00 0.00 1.73
2460 4158 6.803320 CACACTCCAATACAACTTTGCTTATG 59.197 38.462 0.00 0.00 0.00 1.90
2461 4159 6.490040 ACACTCCAATACAACTTTGCTTATGT 59.510 34.615 0.00 0.00 0.00 2.29
2462 4160 6.803320 CACTCCAATACAACTTTGCTTATGTG 59.197 38.462 0.00 0.00 0.00 3.21
2463 4161 6.071952 ACTCCAATACAACTTTGCTTATGTGG 60.072 38.462 0.00 0.00 0.00 4.17
2464 4162 4.864247 CCAATACAACTTTGCTTATGTGGC 59.136 41.667 0.00 0.00 0.00 5.01
2465 4163 5.468592 CAATACAACTTTGCTTATGTGGCA 58.531 37.500 0.00 0.00 37.97 4.92
2466 4164 3.369546 ACAACTTTGCTTATGTGGCAC 57.630 42.857 11.55 11.55 39.55 5.01
2467 4165 2.692557 ACAACTTTGCTTATGTGGCACA 59.307 40.909 24.36 24.36 39.55 4.57
2468 4166 3.321682 ACAACTTTGCTTATGTGGCACAT 59.678 39.130 33.18 33.18 44.52 3.21
2469 4167 4.522405 ACAACTTTGCTTATGTGGCACATA 59.478 37.500 31.06 31.06 44.52 2.29
2470 4168 5.185635 ACAACTTTGCTTATGTGGCACATAT 59.814 36.000 33.89 18.57 44.52 1.78
2471 4169 5.920193 ACTTTGCTTATGTGGCACATATT 57.080 34.783 33.89 17.87 44.52 1.28
2472 4170 6.284891 ACTTTGCTTATGTGGCACATATTT 57.715 33.333 33.89 17.52 44.52 1.40
2473 4171 7.403312 ACTTTGCTTATGTGGCACATATTTA 57.597 32.000 33.89 21.55 44.52 1.40
2474 4172 7.835822 ACTTTGCTTATGTGGCACATATTTAA 58.164 30.769 33.89 25.24 44.52 1.52
2475 4173 8.477256 ACTTTGCTTATGTGGCACATATTTAAT 58.523 29.630 33.89 15.77 44.52 1.40
2476 4174 8.645730 TTTGCTTATGTGGCACATATTTAATG 57.354 30.769 33.89 20.34 44.52 1.90
2477 4175 7.579761 TGCTTATGTGGCACATATTTAATGA 57.420 32.000 33.89 19.68 44.52 2.57
2478 4176 8.005192 TGCTTATGTGGCACATATTTAATGAA 57.995 30.769 33.89 20.49 44.52 2.57
2479 4177 8.136800 TGCTTATGTGGCACATATTTAATGAAG 58.863 33.333 33.89 27.40 44.52 3.02
2480 4178 8.352201 GCTTATGTGGCACATATTTAATGAAGA 58.648 33.333 33.89 17.83 44.52 2.87
2481 4179 9.888878 CTTATGTGGCACATATTTAATGAAGAG 57.111 33.333 33.89 22.09 44.52 2.85
2482 4180 9.625747 TTATGTGGCACATATTTAATGAAGAGA 57.374 29.630 33.89 16.11 44.52 3.10
2483 4181 7.558161 TGTGGCACATATTTAATGAAGAGAG 57.442 36.000 17.96 0.00 44.52 3.20
2484 4182 7.337938 TGTGGCACATATTTAATGAAGAGAGA 58.662 34.615 17.96 0.00 44.52 3.10
2485 4183 7.496920 TGTGGCACATATTTAATGAAGAGAGAG 59.503 37.037 17.96 0.00 44.52 3.20
2486 4184 6.994496 TGGCACATATTTAATGAAGAGAGAGG 59.006 38.462 0.00 0.00 0.00 3.69
2487 4185 6.995091 GGCACATATTTAATGAAGAGAGAGGT 59.005 38.462 0.00 0.00 0.00 3.85
2488 4186 7.041508 GGCACATATTTAATGAAGAGAGAGGTG 60.042 40.741 0.00 0.00 0.00 4.00
2489 4187 7.519649 GCACATATTTAATGAAGAGAGAGGTGC 60.520 40.741 0.00 0.00 37.76 5.01
2490 4188 7.714377 CACATATTTAATGAAGAGAGAGGTGCT 59.286 37.037 0.00 0.00 0.00 4.40
2491 4189 8.270744 ACATATTTAATGAAGAGAGAGGTGCTT 58.729 33.333 0.00 0.00 0.00 3.91
2492 4190 6.998968 ATTTAATGAAGAGAGAGGTGCTTG 57.001 37.500 0.00 0.00 0.00 4.01
2493 4191 5.489792 TTAATGAAGAGAGAGGTGCTTGT 57.510 39.130 0.00 0.00 0.00 3.16
2494 4192 2.827800 TGAAGAGAGAGGTGCTTGTG 57.172 50.000 0.00 0.00 0.00 3.33
2495 4193 1.345741 TGAAGAGAGAGGTGCTTGTGG 59.654 52.381 0.00 0.00 0.00 4.17
2496 4194 1.346068 GAAGAGAGAGGTGCTTGTGGT 59.654 52.381 0.00 0.00 0.00 4.16
2497 4195 2.310779 AGAGAGAGGTGCTTGTGGTA 57.689 50.000 0.00 0.00 0.00 3.25
2498 4196 2.609747 AGAGAGAGGTGCTTGTGGTAA 58.390 47.619 0.00 0.00 0.00 2.85
2499 4197 2.300437 AGAGAGAGGTGCTTGTGGTAAC 59.700 50.000 0.00 0.00 0.00 2.50
2500 4198 2.300437 GAGAGAGGTGCTTGTGGTAACT 59.700 50.000 0.00 0.00 37.61 2.24
2501 4199 3.507411 AGAGAGGTGCTTGTGGTAACTA 58.493 45.455 0.00 0.00 37.61 2.24
2502 4200 3.511934 AGAGAGGTGCTTGTGGTAACTAG 59.488 47.826 0.00 0.00 37.61 2.57
2519 4217 5.672421 AACTAGCTAAGTTACCGGAACAT 57.328 39.130 9.46 4.03 46.85 2.71
2520 4218 5.259832 ACTAGCTAAGTTACCGGAACATC 57.740 43.478 9.46 0.00 40.86 3.06
2521 4219 4.708421 ACTAGCTAAGTTACCGGAACATCA 59.292 41.667 9.46 0.00 40.86 3.07
2522 4220 3.858247 AGCTAAGTTACCGGAACATCAC 58.142 45.455 9.46 0.66 40.86 3.06
2523 4221 3.259876 AGCTAAGTTACCGGAACATCACA 59.740 43.478 9.46 0.00 40.86 3.58
2524 4222 3.370061 GCTAAGTTACCGGAACATCACAC 59.630 47.826 9.46 0.00 40.86 3.82
2525 4223 3.478857 AAGTTACCGGAACATCACACA 57.521 42.857 9.46 0.00 40.86 3.72
2526 4224 2.762745 AGTTACCGGAACATCACACAC 58.237 47.619 9.46 0.00 40.86 3.82
2527 4225 2.367567 AGTTACCGGAACATCACACACT 59.632 45.455 9.46 0.00 40.86 3.55
2528 4226 2.735134 GTTACCGGAACATCACACACTC 59.265 50.000 9.46 0.00 38.02 3.51
2529 4227 0.034896 ACCGGAACATCACACACTCC 59.965 55.000 9.46 0.00 0.00 3.85
2530 4228 0.034756 CCGGAACATCACACACTCCA 59.965 55.000 0.00 0.00 0.00 3.86
2531 4229 1.542328 CCGGAACATCACACACTCCAA 60.542 52.381 0.00 0.00 0.00 3.53
2532 4230 1.800586 CGGAACATCACACACTCCAAG 59.199 52.381 0.00 0.00 0.00 3.61
2533 4231 2.547855 CGGAACATCACACACTCCAAGA 60.548 50.000 0.00 0.00 0.00 3.02
2534 4232 3.476552 GGAACATCACACACTCCAAGAA 58.523 45.455 0.00 0.00 0.00 2.52
2535 4233 3.882888 GGAACATCACACACTCCAAGAAA 59.117 43.478 0.00 0.00 0.00 2.52
2536 4234 4.261197 GGAACATCACACACTCCAAGAAAC 60.261 45.833 0.00 0.00 0.00 2.78
2537 4235 3.884895 ACATCACACACTCCAAGAAACA 58.115 40.909 0.00 0.00 0.00 2.83
2538 4236 4.269183 ACATCACACACTCCAAGAAACAA 58.731 39.130 0.00 0.00 0.00 2.83
2539 4237 4.889409 ACATCACACACTCCAAGAAACAAT 59.111 37.500 0.00 0.00 0.00 2.71
2540 4238 4.898829 TCACACACTCCAAGAAACAATG 57.101 40.909 0.00 0.00 0.00 2.82
2541 4239 4.522114 TCACACACTCCAAGAAACAATGA 58.478 39.130 0.00 0.00 0.00 2.57
2542 4240 4.576053 TCACACACTCCAAGAAACAATGAG 59.424 41.667 0.00 0.00 0.00 2.90
2543 4241 4.336433 CACACACTCCAAGAAACAATGAGT 59.664 41.667 0.00 0.00 36.77 3.41
2544 4242 4.576463 ACACACTCCAAGAAACAATGAGTC 59.424 41.667 0.00 0.00 34.21 3.36
2545 4243 4.818546 CACACTCCAAGAAACAATGAGTCT 59.181 41.667 0.00 0.00 34.21 3.24
2546 4244 5.991606 CACACTCCAAGAAACAATGAGTCTA 59.008 40.000 0.00 0.00 34.21 2.59
2547 4245 6.652481 CACACTCCAAGAAACAATGAGTCTAT 59.348 38.462 0.00 0.00 34.21 1.98
2548 4246 7.819415 CACACTCCAAGAAACAATGAGTCTATA 59.181 37.037 0.00 0.00 34.21 1.31
2549 4247 8.375506 ACACTCCAAGAAACAATGAGTCTATAA 58.624 33.333 0.00 0.00 34.21 0.98
2550 4248 8.660373 CACTCCAAGAAACAATGAGTCTATAAC 58.340 37.037 0.00 0.00 34.21 1.89
2551 4249 7.824779 ACTCCAAGAAACAATGAGTCTATAACC 59.175 37.037 0.00 0.00 30.81 2.85
2552 4250 7.918076 TCCAAGAAACAATGAGTCTATAACCT 58.082 34.615 0.00 0.00 0.00 3.50
2553 4251 9.042450 TCCAAGAAACAATGAGTCTATAACCTA 57.958 33.333 0.00 0.00 0.00 3.08
2554 4252 9.667107 CCAAGAAACAATGAGTCTATAACCTAA 57.333 33.333 0.00 0.00 0.00 2.69
2573 4271 8.445275 AACCTAATAAATACATCGTTGCATGA 57.555 30.769 0.00 0.00 0.00 3.07
2574 4272 7.861630 ACCTAATAAATACATCGTTGCATGAC 58.138 34.615 0.00 0.00 0.00 3.06
2575 4273 7.497579 ACCTAATAAATACATCGTTGCATGACA 59.502 33.333 0.00 0.00 0.00 3.58
2576 4274 7.798516 CCTAATAAATACATCGTTGCATGACAC 59.201 37.037 0.00 0.00 0.00 3.67
2577 4275 6.925610 ATAAATACATCGTTGCATGACACT 57.074 33.333 0.00 0.00 0.00 3.55
2578 4276 8.432110 AATAAATACATCGTTGCATGACACTA 57.568 30.769 0.00 0.00 0.00 2.74
2579 4277 5.718649 AATACATCGTTGCATGACACTAC 57.281 39.130 0.00 0.00 0.00 2.73
2580 4278 3.038788 ACATCGTTGCATGACACTACA 57.961 42.857 0.00 0.00 0.00 2.74
2581 4279 3.599343 ACATCGTTGCATGACACTACAT 58.401 40.909 0.00 0.00 0.00 2.29
2582 4280 4.754322 ACATCGTTGCATGACACTACATA 58.246 39.130 0.00 0.00 0.00 2.29
2583 4281 4.805719 ACATCGTTGCATGACACTACATAG 59.194 41.667 0.00 0.00 0.00 2.23
2584 4282 4.712122 TCGTTGCATGACACTACATAGA 57.288 40.909 0.00 0.00 0.00 1.98
2585 4283 4.421058 TCGTTGCATGACACTACATAGAC 58.579 43.478 0.00 0.00 0.00 2.59
2586 4284 3.240631 CGTTGCATGACACTACATAGACG 59.759 47.826 0.00 0.00 0.00 4.18
2587 4285 4.174009 GTTGCATGACACTACATAGACGT 58.826 43.478 0.00 0.00 0.00 4.34
2588 4286 4.450082 TGCATGACACTACATAGACGTT 57.550 40.909 0.00 0.00 0.00 3.99
2589 4287 4.421058 TGCATGACACTACATAGACGTTC 58.579 43.478 0.00 0.00 0.00 3.95
2590 4288 3.797256 GCATGACACTACATAGACGTTCC 59.203 47.826 0.00 0.00 0.00 3.62
2591 4289 4.440250 GCATGACACTACATAGACGTTCCT 60.440 45.833 0.00 0.00 0.00 3.36
2592 4290 5.220989 GCATGACACTACATAGACGTTCCTA 60.221 44.000 0.00 0.00 0.00 2.94
2593 4291 5.808042 TGACACTACATAGACGTTCCTAC 57.192 43.478 0.00 0.00 0.00 3.18
2594 4292 4.637534 TGACACTACATAGACGTTCCTACC 59.362 45.833 0.00 0.00 0.00 3.18
2595 4293 3.950395 ACACTACATAGACGTTCCTACCC 59.050 47.826 0.00 0.00 0.00 3.69
2596 4294 3.949754 CACTACATAGACGTTCCTACCCA 59.050 47.826 0.00 0.00 0.00 4.51
2597 4295 3.950395 ACTACATAGACGTTCCTACCCAC 59.050 47.826 0.00 0.00 0.00 4.61
2598 4296 3.097342 ACATAGACGTTCCTACCCACT 57.903 47.619 0.00 0.00 0.00 4.00
2599 4297 4.240881 ACATAGACGTTCCTACCCACTA 57.759 45.455 0.00 0.00 0.00 2.74
2600 4298 4.801164 ACATAGACGTTCCTACCCACTAT 58.199 43.478 0.00 0.00 0.00 2.12
2601 4299 4.583489 ACATAGACGTTCCTACCCACTATG 59.417 45.833 11.44 11.44 40.45 2.23
2602 4300 2.385803 AGACGTTCCTACCCACTATGG 58.614 52.381 0.00 0.00 37.25 2.74
2603 4301 2.024655 AGACGTTCCTACCCACTATGGA 60.025 50.000 0.00 0.00 40.96 3.41
2604 4302 2.361438 GACGTTCCTACCCACTATGGAG 59.639 54.545 0.00 0.00 40.96 3.86
2605 4303 1.687123 CGTTCCTACCCACTATGGAGG 59.313 57.143 0.00 0.00 40.96 4.30
2606 4304 2.760581 GTTCCTACCCACTATGGAGGT 58.239 52.381 0.00 1.66 40.96 3.85
2607 4305 3.689280 CGTTCCTACCCACTATGGAGGTA 60.689 52.174 0.00 3.53 40.96 3.08
2613 4311 4.341863 ACCCACTATGGAGGTAGTAACA 57.658 45.455 0.00 0.00 40.96 2.41
2614 4312 4.892198 ACCCACTATGGAGGTAGTAACAT 58.108 43.478 0.00 0.00 40.96 2.71
2615 4313 6.034442 ACCCACTATGGAGGTAGTAACATA 57.966 41.667 0.00 0.00 40.96 2.29
2616 4314 6.075984 ACCCACTATGGAGGTAGTAACATAG 58.924 44.000 8.52 8.52 45.07 2.23
2622 4320 8.795842 CTATGGAGGTAGTAACATAGTCTAGG 57.204 42.308 0.00 0.00 38.48 3.02
2623 4321 5.950023 TGGAGGTAGTAACATAGTCTAGGG 58.050 45.833 0.00 0.00 0.00 3.53
2624 4322 5.673574 TGGAGGTAGTAACATAGTCTAGGGA 59.326 44.000 0.00 0.00 0.00 4.20
2625 4323 6.160992 TGGAGGTAGTAACATAGTCTAGGGAA 59.839 42.308 0.00 0.00 0.00 3.97
2626 4324 6.716173 GGAGGTAGTAACATAGTCTAGGGAAG 59.284 46.154 0.00 0.00 0.00 3.46
2627 4325 7.223472 AGGTAGTAACATAGTCTAGGGAAGT 57.777 40.000 0.00 0.00 0.00 3.01
2628 4326 7.061688 AGGTAGTAACATAGTCTAGGGAAGTG 58.938 42.308 0.00 0.00 0.00 3.16
2629 4327 6.832900 GGTAGTAACATAGTCTAGGGAAGTGT 59.167 42.308 0.00 0.00 0.00 3.55
2630 4328 6.777213 AGTAACATAGTCTAGGGAAGTGTG 57.223 41.667 0.00 0.00 0.00 3.82
2631 4329 6.254522 AGTAACATAGTCTAGGGAAGTGTGT 58.745 40.000 0.00 0.00 0.00 3.72
2632 4330 7.408543 AGTAACATAGTCTAGGGAAGTGTGTA 58.591 38.462 0.00 0.00 0.00 2.90
2633 4331 7.892241 AGTAACATAGTCTAGGGAAGTGTGTAA 59.108 37.037 0.00 0.00 0.00 2.41
2634 4332 6.777213 ACATAGTCTAGGGAAGTGTGTAAG 57.223 41.667 0.00 0.00 0.00 2.34
2635 4333 6.254522 ACATAGTCTAGGGAAGTGTGTAAGT 58.745 40.000 0.00 0.00 0.00 2.24
2636 4334 6.724905 ACATAGTCTAGGGAAGTGTGTAAGTT 59.275 38.462 0.00 0.00 0.00 2.66
2637 4335 7.892241 ACATAGTCTAGGGAAGTGTGTAAGTTA 59.108 37.037 0.00 0.00 0.00 2.24
2638 4336 6.587206 AGTCTAGGGAAGTGTGTAAGTTAC 57.413 41.667 6.06 6.06 0.00 2.50
2639 4337 6.313324 AGTCTAGGGAAGTGTGTAAGTTACT 58.687 40.000 14.00 0.00 0.00 2.24
2640 4338 7.465116 AGTCTAGGGAAGTGTGTAAGTTACTA 58.535 38.462 14.00 1.06 0.00 1.82
2641 4339 7.611079 AGTCTAGGGAAGTGTGTAAGTTACTAG 59.389 40.741 14.00 4.64 33.84 2.57
2642 4340 5.402997 AGGGAAGTGTGTAAGTTACTAGC 57.597 43.478 14.00 5.48 0.00 3.42
2643 4341 5.085219 AGGGAAGTGTGTAAGTTACTAGCT 58.915 41.667 14.00 6.35 0.00 3.32
2644 4342 5.543020 AGGGAAGTGTGTAAGTTACTAGCTT 59.457 40.000 14.00 13.25 0.00 3.74
2645 4343 6.723052 AGGGAAGTGTGTAAGTTACTAGCTTA 59.277 38.462 14.00 0.00 0.00 3.09
2646 4344 7.399478 AGGGAAGTGTGTAAGTTACTAGCTTAT 59.601 37.037 14.00 3.60 32.01 1.73
2647 4345 7.491696 GGGAAGTGTGTAAGTTACTAGCTTATG 59.508 40.741 14.00 0.00 32.01 1.90
2648 4346 8.033626 GGAAGTGTGTAAGTTACTAGCTTATGT 58.966 37.037 14.00 0.00 32.01 2.29
2649 4347 9.420551 GAAGTGTGTAAGTTACTAGCTTATGTT 57.579 33.333 14.00 0.00 32.01 2.71
2650 4348 8.983307 AGTGTGTAAGTTACTAGCTTATGTTC 57.017 34.615 14.00 0.00 32.01 3.18
2651 4349 8.804204 AGTGTGTAAGTTACTAGCTTATGTTCT 58.196 33.333 14.00 0.00 32.01 3.01
2652 4350 9.420551 GTGTGTAAGTTACTAGCTTATGTTCTT 57.579 33.333 14.00 1.42 32.01 2.52
2653 4351 9.419297 TGTGTAAGTTACTAGCTTATGTTCTTG 57.581 33.333 14.00 0.00 32.01 3.02
2654 4352 8.381387 GTGTAAGTTACTAGCTTATGTTCTTGC 58.619 37.037 14.00 3.08 32.01 4.01
2655 4353 6.986904 AAGTTACTAGCTTATGTTCTTGCC 57.013 37.500 0.00 0.00 0.00 4.52
2656 4354 5.429130 AGTTACTAGCTTATGTTCTTGCCC 58.571 41.667 0.00 0.00 0.00 5.36
2657 4355 5.045869 AGTTACTAGCTTATGTTCTTGCCCA 60.046 40.000 0.00 0.00 0.00 5.36
2658 4356 4.510167 ACTAGCTTATGTTCTTGCCCAT 57.490 40.909 0.00 0.00 0.00 4.00
2659 4357 4.860022 ACTAGCTTATGTTCTTGCCCATT 58.140 39.130 0.00 0.00 0.00 3.16
2660 4358 4.641989 ACTAGCTTATGTTCTTGCCCATTG 59.358 41.667 0.00 0.00 0.00 2.82
2661 4359 3.434309 AGCTTATGTTCTTGCCCATTGT 58.566 40.909 0.00 0.00 0.00 2.71
2662 4360 3.194116 AGCTTATGTTCTTGCCCATTGTG 59.806 43.478 0.00 0.00 0.00 3.33
2663 4361 3.193267 GCTTATGTTCTTGCCCATTGTGA 59.807 43.478 0.00 0.00 0.00 3.58
2664 4362 4.737054 CTTATGTTCTTGCCCATTGTGAC 58.263 43.478 0.00 0.00 0.00 3.67
2665 4363 1.327303 TGTTCTTGCCCATTGTGACC 58.673 50.000 0.00 0.00 0.00 4.02
2666 4364 1.327303 GTTCTTGCCCATTGTGACCA 58.673 50.000 0.00 0.00 0.00 4.02
2667 4365 1.270550 GTTCTTGCCCATTGTGACCAG 59.729 52.381 0.00 0.00 0.00 4.00
2680 4378 6.460123 CCATTGTGACCAGCCTTATAATTCAC 60.460 42.308 0.00 0.00 33.91 3.18
2710 4408 5.469084 GCTGGTTTTACTACAAGTAGTGCTT 59.531 40.000 20.14 0.00 45.25 3.91
2719 4417 3.000727 ACAAGTAGTGCTTTGGATACGC 58.999 45.455 0.00 0.00 35.15 4.42
2732 4430 6.677920 GCTTTGGATACGCATGAAGTTAATGT 60.678 38.462 0.00 0.00 42.51 2.71
2751 4449 2.688666 ATGCCAGGGAGGAAGCGA 60.689 61.111 0.00 0.00 41.22 4.93
2773 4471 5.295292 CGACGAGGAGTACCAGTCTAAATTA 59.705 44.000 0.00 0.00 40.90 1.40
2785 4483 8.834749 ACCAGTCTAAATTAGTTTGAGAACTC 57.165 34.615 0.00 0.00 44.75 3.01
2788 4486 9.622004 CAGTCTAAATTAGTTTGAGAACTCGTA 57.378 33.333 0.00 0.00 44.75 3.43
2818 4516 9.472361 TGTAACTCTTGTTGTACTTTCTGATAC 57.528 33.333 0.00 0.00 37.59 2.24
2819 4517 7.964604 AACTCTTGTTGTACTTTCTGATACC 57.035 36.000 0.00 0.00 34.71 2.73
2820 4518 7.304497 ACTCTTGTTGTACTTTCTGATACCT 57.696 36.000 0.00 0.00 0.00 3.08
2842 4540 5.183713 CCTGAGAATATTTGTGTTGGCAAGA 59.816 40.000 0.00 0.00 0.00 3.02
2866 4564 5.353938 CATGGCCATGTAAAGGATTTGAAG 58.646 41.667 33.68 5.88 39.63 3.02
2887 4585 6.653320 TGAAGGGTGATTATATAACATTCGCC 59.347 38.462 14.76 14.76 36.47 5.54
2899 4597 4.852609 AACATTCGCCTAAACGTATGAC 57.147 40.909 9.91 0.00 41.60 3.06
2907 4605 4.299978 GCCTAAACGTATGACAGATCTCC 58.700 47.826 0.00 0.00 0.00 3.71
2911 4609 6.986817 CCTAAACGTATGACAGATCTCCATTT 59.013 38.462 11.20 4.98 0.00 2.32
2912 4610 7.495934 CCTAAACGTATGACAGATCTCCATTTT 59.504 37.037 11.20 9.03 0.00 1.82
2913 4611 6.668541 AACGTATGACAGATCTCCATTTTG 57.331 37.500 11.20 5.97 0.00 2.44
2938 4636 8.522830 TGATAAAATTTTACTCCCTCTGCAAAG 58.477 33.333 12.74 0.00 0.00 2.77
2950 4648 7.092668 ACTCCCTCTGCAAAGAAATATAAGAGT 60.093 37.037 0.00 0.00 0.00 3.24
2997 4695 8.997621 TTAGTGATCTAATTAAACGCTCTTGT 57.002 30.769 0.00 0.00 32.03 3.16
3000 4698 9.601217 AGTGATCTAATTAAACGCTCTTGTATT 57.399 29.630 0.00 0.00 0.00 1.89
3012 4710 8.649973 AACGCTCTTGTATTTCTTTATAGAGG 57.350 34.615 0.00 0.00 0.00 3.69
3013 4711 7.210873 ACGCTCTTGTATTTCTTTATAGAGGG 58.789 38.462 0.00 0.00 43.02 4.30
3014 4712 7.069578 ACGCTCTTGTATTTCTTTATAGAGGGA 59.930 37.037 16.73 0.00 41.16 4.20
3015 4713 7.596995 CGCTCTTGTATTTCTTTATAGAGGGAG 59.403 40.741 0.00 0.00 41.16 4.30
3048 4807 2.024655 AGATCCAACAATCACCCTGCAT 60.025 45.455 0.00 0.00 0.00 3.96
3049 4808 2.307496 TCCAACAATCACCCTGCATT 57.693 45.000 0.00 0.00 0.00 3.56
3087 4846 2.030805 CCAAAGTGAAAGTGGCAGTAGC 60.031 50.000 0.00 0.00 41.10 3.58
3101 4860 2.292292 GCAGTAGCTACTACTCCTCAGC 59.708 54.545 25.63 17.67 44.37 4.26
3110 4869 0.545309 TACTCCTCAGCAGGCCAACT 60.545 55.000 5.01 0.00 40.12 3.16
3131 4890 6.458232 ACTAGAAAGAGCTGTACGAATCAT 57.542 37.500 0.00 0.00 0.00 2.45
3145 4904 1.261619 GAATCATCATCGCGTGGTTCC 59.738 52.381 5.77 0.00 30.95 3.62
3148 4907 0.875908 CATCATCGCGTGGTTCCGAT 60.876 55.000 5.77 0.00 44.21 4.18
3150 4909 0.456628 TCATCGCGTGGTTCCGATTA 59.543 50.000 5.77 0.00 41.76 1.75
3155 4914 1.395608 CGCGTGGTTCCGATTAACATT 59.604 47.619 0.00 0.00 0.00 2.71
3165 4924 8.361139 TGGTTCCGATTAACATTTTGTAATTGT 58.639 29.630 0.00 0.00 0.00 2.71
3204 4963 9.676861 TGCGTACTCCTATACTATATATGTGTT 57.323 33.333 0.00 0.00 0.00 3.32
3223 4982 4.522789 GTGTTAACTCCATTGGTTCCATGT 59.477 41.667 7.22 0.00 0.00 3.21
3233 4992 3.017048 TGGTTCCATGTCATCCAATCC 57.983 47.619 0.00 0.00 0.00 3.01
3234 4993 2.311243 TGGTTCCATGTCATCCAATCCA 59.689 45.455 0.00 0.00 0.00 3.41
3272 7258 3.196469 TGTACAGGGAAGATGAAGCTCAG 59.804 47.826 0.00 0.00 0.00 3.35
3275 7261 2.235650 CAGGGAAGATGAAGCTCAGTGA 59.764 50.000 0.00 0.00 0.00 3.41
3283 7269 1.345415 TGAAGCTCAGTGATGTGCTGA 59.655 47.619 6.16 0.00 40.28 4.26
3285 7271 2.783609 AGCTCAGTGATGTGCTGATT 57.216 45.000 4.67 0.00 41.49 2.57
3328 7314 9.755122 ACAGTATGCATCTACAGGAGTATATTA 57.245 33.333 0.19 0.00 42.53 0.98
3348 7334 5.843673 TTAGATCCTTCACAGACTAGCAG 57.156 43.478 0.00 0.00 0.00 4.24
3390 7376 7.862512 ATTCAGCAAGATTTAAGAGAAGGAG 57.137 36.000 0.00 0.00 0.00 3.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
42 43 8.196802 TCACATATATATAAATGAAGCCGTGC 57.803 34.615 0.00 0.00 0.00 5.34
87 88 7.712204 TTACTTTTCTCCTTTTTCTTGGTGT 57.288 32.000 0.00 0.00 0.00 4.16
110 111 5.265191 GCCCCTCTTTCCTCTCTTTATTTT 58.735 41.667 0.00 0.00 0.00 1.82
123 124 2.358247 TTGTCGCGCCCCTCTTTC 60.358 61.111 0.00 0.00 0.00 2.62
161 162 3.873952 TCACGATGAACACACACAAATGA 59.126 39.130 0.00 0.00 0.00 2.57
163 164 5.437289 AATCACGATGAACACACACAAAT 57.563 34.783 0.00 0.00 0.00 2.32
165 166 4.333926 TCAAATCACGATGAACACACACAA 59.666 37.500 0.00 0.00 0.00 3.33
167 168 4.466567 TCAAATCACGATGAACACACAC 57.533 40.909 0.00 0.00 0.00 3.82
168 169 4.514816 ACATCAAATCACGATGAACACACA 59.485 37.500 7.12 0.00 42.39 3.72
170 171 6.793492 TTACATCAAATCACGATGAACACA 57.207 33.333 7.12 0.00 42.39 3.72
179 180 8.116753 GTCTCCTACATTTTACATCAAATCACG 58.883 37.037 0.00 0.00 0.00 4.35
182 183 7.556275 TGGGTCTCCTACATTTTACATCAAATC 59.444 37.037 0.00 0.00 0.00 2.17
187 188 5.741011 TGTGGGTCTCCTACATTTTACATC 58.259 41.667 0.98 0.00 0.00 3.06
192 193 4.798882 TGTTTGTGGGTCTCCTACATTTT 58.201 39.130 5.86 0.00 0.00 1.82
194 195 3.650942 TCTGTTTGTGGGTCTCCTACATT 59.349 43.478 5.86 0.00 0.00 2.71
195 196 3.248024 TCTGTTTGTGGGTCTCCTACAT 58.752 45.455 5.86 0.00 0.00 2.29
196 197 2.684943 TCTGTTTGTGGGTCTCCTACA 58.315 47.619 0.98 0.98 0.00 2.74
197 198 3.764237 TTCTGTTTGTGGGTCTCCTAC 57.236 47.619 0.00 0.00 0.00 3.18
199 200 3.884037 ATTTCTGTTTGTGGGTCTCCT 57.116 42.857 0.00 0.00 0.00 3.69
200 201 4.652822 AGTATTTCTGTTTGTGGGTCTCC 58.347 43.478 0.00 0.00 0.00 3.71
202 203 7.074653 TCTTAGTATTTCTGTTTGTGGGTCT 57.925 36.000 0.00 0.00 0.00 3.85
204 205 7.458397 TCATCTTAGTATTTCTGTTTGTGGGT 58.542 34.615 0.00 0.00 0.00 4.51
205 206 7.921786 TCATCTTAGTATTTCTGTTTGTGGG 57.078 36.000 0.00 0.00 0.00 4.61
267 268 9.688091 TGGCTTGTATTTTTAATACTCATGGTA 57.312 29.630 10.05 0.00 34.62 3.25
268 269 8.588290 TGGCTTGTATTTTTAATACTCATGGT 57.412 30.769 10.05 0.00 0.00 3.55
296 297 8.691797 AGTTAATTGTCTAAGCAACCTGAAAAA 58.308 29.630 0.00 0.00 0.00 1.94
297 298 8.232913 AGTTAATTGTCTAAGCAACCTGAAAA 57.767 30.769 0.00 0.00 0.00 2.29
298 299 7.817418 AGTTAATTGTCTAAGCAACCTGAAA 57.183 32.000 0.00 0.00 0.00 2.69
299 300 7.040686 GGAAGTTAATTGTCTAAGCAACCTGAA 60.041 37.037 0.00 0.00 0.00 3.02
300 301 6.430000 GGAAGTTAATTGTCTAAGCAACCTGA 59.570 38.462 0.00 0.00 0.00 3.86
301 302 6.349363 GGGAAGTTAATTGTCTAAGCAACCTG 60.349 42.308 0.00 0.00 0.00 4.00
302 303 5.710567 GGGAAGTTAATTGTCTAAGCAACCT 59.289 40.000 0.00 0.00 0.00 3.50
303 304 5.710567 AGGGAAGTTAATTGTCTAAGCAACC 59.289 40.000 0.00 0.00 0.00 3.77
304 305 6.819397 AGGGAAGTTAATTGTCTAAGCAAC 57.181 37.500 0.00 0.00 0.00 4.17
305 306 8.956426 CATAAGGGAAGTTAATTGTCTAAGCAA 58.044 33.333 0.00 0.00 0.00 3.91
306 307 8.325787 TCATAAGGGAAGTTAATTGTCTAAGCA 58.674 33.333 0.00 0.00 0.00 3.91
307 308 8.732746 TCATAAGGGAAGTTAATTGTCTAAGC 57.267 34.615 0.00 0.00 0.00 3.09
310 311 9.832445 GTGATCATAAGGGAAGTTAATTGTCTA 57.168 33.333 0.00 0.00 0.00 2.59
311 312 8.328758 TGTGATCATAAGGGAAGTTAATTGTCT 58.671 33.333 0.00 0.00 0.00 3.41
312 313 8.398665 GTGTGATCATAAGGGAAGTTAATTGTC 58.601 37.037 0.00 0.00 0.00 3.18
313 314 7.065803 CGTGTGATCATAAGGGAAGTTAATTGT 59.934 37.037 0.00 0.00 0.00 2.71
314 315 7.409697 CGTGTGATCATAAGGGAAGTTAATTG 58.590 38.462 0.00 0.00 0.00 2.32
315 316 6.038271 GCGTGTGATCATAAGGGAAGTTAATT 59.962 38.462 0.00 0.00 0.00 1.40
316 317 5.527582 GCGTGTGATCATAAGGGAAGTTAAT 59.472 40.000 0.00 0.00 0.00 1.40
317 318 4.873827 GCGTGTGATCATAAGGGAAGTTAA 59.126 41.667 0.00 0.00 0.00 2.01
318 319 4.439057 GCGTGTGATCATAAGGGAAGTTA 58.561 43.478 0.00 0.00 0.00 2.24
319 320 3.270877 GCGTGTGATCATAAGGGAAGTT 58.729 45.455 0.00 0.00 0.00 2.66
320 321 2.420129 GGCGTGTGATCATAAGGGAAGT 60.420 50.000 0.00 0.00 0.00 3.01
321 322 2.213499 GGCGTGTGATCATAAGGGAAG 58.787 52.381 0.00 0.00 0.00 3.46
322 323 1.134220 GGGCGTGTGATCATAAGGGAA 60.134 52.381 0.00 0.00 0.00 3.97
323 324 0.468226 GGGCGTGTGATCATAAGGGA 59.532 55.000 0.00 0.00 0.00 4.20
324 325 0.469917 AGGGCGTGTGATCATAAGGG 59.530 55.000 0.00 0.00 0.00 3.95
325 326 1.942657 CAAGGGCGTGTGATCATAAGG 59.057 52.381 0.00 0.00 0.00 2.69
326 327 2.905075 TCAAGGGCGTGTGATCATAAG 58.095 47.619 0.00 0.00 0.00 1.73
327 328 3.342377 TTCAAGGGCGTGTGATCATAA 57.658 42.857 0.00 0.00 0.00 1.90
328 329 3.466836 GATTCAAGGGCGTGTGATCATA 58.533 45.455 0.00 0.00 0.00 2.15
329 330 2.292267 GATTCAAGGGCGTGTGATCAT 58.708 47.619 0.00 0.00 0.00 2.45
330 331 1.678728 GGATTCAAGGGCGTGTGATCA 60.679 52.381 0.00 0.00 0.00 2.92
331 332 1.017387 GGATTCAAGGGCGTGTGATC 58.983 55.000 0.00 0.00 0.00 2.92
332 333 0.327924 TGGATTCAAGGGCGTGTGAT 59.672 50.000 0.00 0.00 0.00 3.06
333 334 0.327924 ATGGATTCAAGGGCGTGTGA 59.672 50.000 0.00 0.00 0.00 3.58
334 335 1.135315 CAATGGATTCAAGGGCGTGTG 60.135 52.381 0.00 0.00 0.00 3.82
340 341 2.620115 CGATGACCAATGGATTCAAGGG 59.380 50.000 6.16 0.00 0.00 3.95
348 349 0.973496 TCCGACCGATGACCAATGGA 60.973 55.000 6.16 0.00 0.00 3.41
353 354 0.683179 ATCTGTCCGACCGATGACCA 60.683 55.000 4.78 0.00 0.00 4.02
359 360 1.067142 CAAGGAAATCTGTCCGACCGA 60.067 52.381 0.00 0.00 43.03 4.69
360 361 1.337823 ACAAGGAAATCTGTCCGACCG 60.338 52.381 0.00 0.00 43.03 4.79
364 365 1.197721 GTGCACAAGGAAATCTGTCCG 59.802 52.381 13.17 0.00 43.03 4.79
365 366 2.229792 TGTGCACAAGGAAATCTGTCC 58.770 47.619 19.28 0.00 38.03 4.02
366 367 3.988379 TTGTGCACAAGGAAATCTGTC 57.012 42.857 27.96 0.00 0.00 3.51
502 511 3.944015 GGCAGAGAGTATGCAAGTCAAAT 59.056 43.478 0.00 0.00 45.68 2.32
610 653 3.242739 CGGCCATGTGCTAATTTCAGTAC 60.243 47.826 2.24 0.00 40.92 2.73
631 674 2.435586 CAAGTCAGGCAGAGGGCG 60.436 66.667 0.00 0.00 46.16 6.13
639 682 1.072331 TCCTGGAAAGACAAGTCAGGC 59.928 52.381 0.00 0.00 43.30 4.85
640 683 3.406764 CTTCCTGGAAAGACAAGTCAGG 58.593 50.000 10.86 0.00 44.54 3.86
641 684 3.071602 TCCTTCCTGGAAAGACAAGTCAG 59.928 47.826 10.86 0.00 42.94 3.51
643 686 3.669536 CTCCTTCCTGGAAAGACAAGTC 58.330 50.000 10.86 0.00 45.63 3.01
675 767 2.158608 GGGTATTGGTCATCCTCCTTGG 60.159 54.545 0.00 0.00 34.23 3.61
715 807 4.640647 GTGTTTGTCTTTCTTTGGACTCCT 59.359 41.667 0.00 0.00 34.01 3.69
808 929 2.171870 AGGACAAACCAACTTTCCGAGA 59.828 45.455 0.00 0.00 42.04 4.04
910 1039 4.747810 ACTCTTGGCAAAACAGAAAAGTG 58.252 39.130 0.00 0.00 0.00 3.16
919 1048 1.949525 TCTGCAGACTCTTGGCAAAAC 59.050 47.619 13.74 0.00 37.06 2.43
1146 1287 2.027192 GTCTGCCTCCTCAACCATTGTA 60.027 50.000 0.00 0.00 0.00 2.41
1149 1290 1.067295 TGTCTGCCTCCTCAACCATT 58.933 50.000 0.00 0.00 0.00 3.16
1230 1371 2.965831 GTCCAGCACACCATATCCTCTA 59.034 50.000 0.00 0.00 0.00 2.43
1231 1372 1.765314 GTCCAGCACACCATATCCTCT 59.235 52.381 0.00 0.00 0.00 3.69
1472 1616 7.041440 CGGTGTAAAGATAAACATCATATGGCA 60.041 37.037 2.13 0.00 33.60 4.92
1665 1810 1.079127 AGATGGGAAGCGTGAACGG 60.079 57.895 4.84 0.00 40.23 4.44
1703 1848 4.328169 GCTCACATATTTTCAAAAGGCTGC 59.672 41.667 0.00 0.00 0.00 5.25
1725 1870 2.237392 ACCTTCCATAGTCCTTCTGTGC 59.763 50.000 0.00 0.00 34.58 4.57
1775 1920 4.644685 TCCAGTGATCGTCATCTACATCAA 59.355 41.667 0.00 0.00 31.69 2.57
2041 2186 3.303725 GCGTACACATTTGCTGAGACAAA 60.304 43.478 4.93 4.93 43.27 2.83
2124 2269 6.238402 GGGCGAGGTTTCTTTTAACATATCTC 60.238 42.308 0.00 0.00 0.00 2.75
2149 2294 1.369625 GCTGGGTCCACACTAAATCG 58.630 55.000 0.00 0.00 0.00 3.34
2238 2386 1.707427 AGTGGATCCAAAGCAAGGTCT 59.293 47.619 18.20 2.62 0.00 3.85
2296 2444 1.014352 AACGTCACACTTGGCAGTTC 58.986 50.000 0.00 0.00 0.00 3.01
2352 4050 8.662781 TCCATGAAATTAGATTAAAGTCTCCG 57.337 34.615 0.00 0.00 0.00 4.63
2377 4075 3.747708 GCCTAAGGCGGTATCCTTGATTT 60.748 47.826 5.38 0.00 45.51 2.17
2392 4090 1.683011 CCCATTGTGACCAGCCTAAGG 60.683 57.143 0.00 0.00 0.00 2.69
2393 4091 1.683011 CCCCATTGTGACCAGCCTAAG 60.683 57.143 0.00 0.00 0.00 2.18
2394 4092 0.331278 CCCCATTGTGACCAGCCTAA 59.669 55.000 0.00 0.00 0.00 2.69
2395 4093 0.548926 TCCCCATTGTGACCAGCCTA 60.549 55.000 0.00 0.00 0.00 3.93
2396 4094 1.852157 TCCCCATTGTGACCAGCCT 60.852 57.895 0.00 0.00 0.00 4.58
2397 4095 1.379044 CTCCCCATTGTGACCAGCC 60.379 63.158 0.00 0.00 0.00 4.85
2398 4096 1.379044 CCTCCCCATTGTGACCAGC 60.379 63.158 0.00 0.00 0.00 4.85
2399 4097 0.698238 TTCCTCCCCATTGTGACCAG 59.302 55.000 0.00 0.00 0.00 4.00
2400 4098 1.381867 ATTCCTCCCCATTGTGACCA 58.618 50.000 0.00 0.00 0.00 4.02
2401 4099 2.532250 AATTCCTCCCCATTGTGACC 57.468 50.000 0.00 0.00 0.00 4.02
2402 4100 3.954258 CCTAAATTCCTCCCCATTGTGAC 59.046 47.826 0.00 0.00 0.00 3.67
2403 4101 3.855599 TCCTAAATTCCTCCCCATTGTGA 59.144 43.478 0.00 0.00 0.00 3.58
2404 4102 4.210331 CTCCTAAATTCCTCCCCATTGTG 58.790 47.826 0.00 0.00 0.00 3.33
2405 4103 3.858638 ACTCCTAAATTCCTCCCCATTGT 59.141 43.478 0.00 0.00 0.00 2.71
2406 4104 4.526438 ACTCCTAAATTCCTCCCCATTG 57.474 45.455 0.00 0.00 0.00 2.82
2407 4105 5.494706 TGTTACTCCTAAATTCCTCCCCATT 59.505 40.000 0.00 0.00 0.00 3.16
2408 4106 5.043762 TGTTACTCCTAAATTCCTCCCCAT 58.956 41.667 0.00 0.00 0.00 4.00
2409 4107 4.440808 TGTTACTCCTAAATTCCTCCCCA 58.559 43.478 0.00 0.00 0.00 4.96
2410 4108 5.132144 TGATGTTACTCCTAAATTCCTCCCC 59.868 44.000 0.00 0.00 0.00 4.81
2411 4109 6.056236 GTGATGTTACTCCTAAATTCCTCCC 58.944 44.000 0.00 0.00 0.00 4.30
2412 4110 6.539103 GTGTGATGTTACTCCTAAATTCCTCC 59.461 42.308 0.00 0.00 0.00 4.30
2413 4111 7.064728 GTGTGTGATGTTACTCCTAAATTCCTC 59.935 40.741 0.00 0.00 0.00 3.71
2414 4112 6.879458 GTGTGTGATGTTACTCCTAAATTCCT 59.121 38.462 0.00 0.00 0.00 3.36
2415 4113 6.879458 AGTGTGTGATGTTACTCCTAAATTCC 59.121 38.462 0.00 0.00 0.00 3.01
2416 4114 7.907214 AGTGTGTGATGTTACTCCTAAATTC 57.093 36.000 0.00 0.00 0.00 2.17
2417 4115 7.907214 GAGTGTGTGATGTTACTCCTAAATT 57.093 36.000 0.00 0.00 34.84 1.82
2424 4122 6.163476 TGTATTGGAGTGTGTGATGTTACTC 58.837 40.000 0.00 0.00 38.98 2.59
2425 4123 6.109156 TGTATTGGAGTGTGTGATGTTACT 57.891 37.500 0.00 0.00 0.00 2.24
2426 4124 6.426937 AGTTGTATTGGAGTGTGTGATGTTAC 59.573 38.462 0.00 0.00 0.00 2.50
2427 4125 6.530120 AGTTGTATTGGAGTGTGTGATGTTA 58.470 36.000 0.00 0.00 0.00 2.41
2428 4126 5.376625 AGTTGTATTGGAGTGTGTGATGTT 58.623 37.500 0.00 0.00 0.00 2.71
2429 4127 4.973168 AGTTGTATTGGAGTGTGTGATGT 58.027 39.130 0.00 0.00 0.00 3.06
2430 4128 5.947228 AAGTTGTATTGGAGTGTGTGATG 57.053 39.130 0.00 0.00 0.00 3.07
2431 4129 5.278463 GCAAAGTTGTATTGGAGTGTGTGAT 60.278 40.000 0.00 0.00 0.00 3.06
2432 4130 4.036262 GCAAAGTTGTATTGGAGTGTGTGA 59.964 41.667 0.00 0.00 0.00 3.58
2433 4131 4.036734 AGCAAAGTTGTATTGGAGTGTGTG 59.963 41.667 0.00 0.00 0.00 3.82
2434 4132 4.207165 AGCAAAGTTGTATTGGAGTGTGT 58.793 39.130 0.00 0.00 0.00 3.72
2435 4133 4.836125 AGCAAAGTTGTATTGGAGTGTG 57.164 40.909 0.00 0.00 0.00 3.82
2436 4134 6.490040 ACATAAGCAAAGTTGTATTGGAGTGT 59.510 34.615 0.00 0.00 0.00 3.55
2437 4135 6.803320 CACATAAGCAAAGTTGTATTGGAGTG 59.197 38.462 0.00 0.00 0.00 3.51
2438 4136 6.071952 CCACATAAGCAAAGTTGTATTGGAGT 60.072 38.462 0.00 0.00 0.00 3.85
2439 4137 6.324819 CCACATAAGCAAAGTTGTATTGGAG 58.675 40.000 0.00 0.00 0.00 3.86
2440 4138 5.336372 GCCACATAAGCAAAGTTGTATTGGA 60.336 40.000 0.00 0.00 0.00 3.53
2441 4139 4.864247 GCCACATAAGCAAAGTTGTATTGG 59.136 41.667 0.00 0.00 0.00 3.16
2442 4140 5.345741 GTGCCACATAAGCAAAGTTGTATTG 59.654 40.000 0.00 0.00 43.02 1.90
2443 4141 5.010516 TGTGCCACATAAGCAAAGTTGTATT 59.989 36.000 0.00 0.00 43.02 1.89
2444 4142 4.522405 TGTGCCACATAAGCAAAGTTGTAT 59.478 37.500 0.00 0.00 43.02 2.29
2445 4143 3.885901 TGTGCCACATAAGCAAAGTTGTA 59.114 39.130 0.00 0.00 43.02 2.41
2446 4144 2.692557 TGTGCCACATAAGCAAAGTTGT 59.307 40.909 0.00 0.00 43.02 3.32
2447 4145 3.367992 TGTGCCACATAAGCAAAGTTG 57.632 42.857 0.00 0.00 43.02 3.16
2448 4146 5.920193 ATATGTGCCACATAAGCAAAGTT 57.080 34.783 20.57 0.00 43.50 2.66
2449 4147 5.920193 AATATGTGCCACATAAGCAAAGT 57.080 34.783 20.57 0.54 43.50 2.66
2450 4148 8.757789 CATTAAATATGTGCCACATAAGCAAAG 58.242 33.333 20.57 8.50 43.50 2.77
2451 4149 8.473219 TCATTAAATATGTGCCACATAAGCAAA 58.527 29.630 20.57 12.83 43.50 3.68
2452 4150 8.005192 TCATTAAATATGTGCCACATAAGCAA 57.995 30.769 20.57 14.07 43.50 3.91
2453 4151 7.579761 TCATTAAATATGTGCCACATAAGCA 57.420 32.000 20.57 6.59 43.50 3.91
2454 4152 8.352201 TCTTCATTAAATATGTGCCACATAAGC 58.648 33.333 20.57 0.00 43.50 3.09
2455 4153 9.888878 CTCTTCATTAAATATGTGCCACATAAG 57.111 33.333 20.57 12.73 43.50 1.73
2456 4154 9.625747 TCTCTTCATTAAATATGTGCCACATAA 57.374 29.630 20.57 7.37 43.50 1.90
2457 4155 9.276590 CTCTCTTCATTAAATATGTGCCACATA 57.723 33.333 19.16 19.16 44.29 2.29
2458 4156 7.994911 TCTCTCTTCATTAAATATGTGCCACAT 59.005 33.333 15.69 15.69 42.35 3.21
2459 4157 7.337938 TCTCTCTTCATTAAATATGTGCCACA 58.662 34.615 0.00 0.00 0.00 4.17
2460 4158 7.041508 CCTCTCTCTTCATTAAATATGTGCCAC 60.042 40.741 0.00 0.00 0.00 5.01
2461 4159 6.994496 CCTCTCTCTTCATTAAATATGTGCCA 59.006 38.462 0.00 0.00 0.00 4.92
2462 4160 6.995091 ACCTCTCTCTTCATTAAATATGTGCC 59.005 38.462 0.00 0.00 0.00 5.01
2463 4161 7.519649 GCACCTCTCTCTTCATTAAATATGTGC 60.520 40.741 0.00 0.00 35.67 4.57
2464 4162 7.714377 AGCACCTCTCTCTTCATTAAATATGTG 59.286 37.037 0.00 0.00 0.00 3.21
2465 4163 7.800092 AGCACCTCTCTCTTCATTAAATATGT 58.200 34.615 0.00 0.00 0.00 2.29
2466 4164 8.557864 CAAGCACCTCTCTCTTCATTAAATATG 58.442 37.037 0.00 0.00 0.00 1.78
2467 4165 8.270744 ACAAGCACCTCTCTCTTCATTAAATAT 58.729 33.333 0.00 0.00 0.00 1.28
2468 4166 7.550551 CACAAGCACCTCTCTCTTCATTAAATA 59.449 37.037 0.00 0.00 0.00 1.40
2469 4167 6.373774 CACAAGCACCTCTCTCTTCATTAAAT 59.626 38.462 0.00 0.00 0.00 1.40
2470 4168 5.702670 CACAAGCACCTCTCTCTTCATTAAA 59.297 40.000 0.00 0.00 0.00 1.52
2471 4169 5.240891 CACAAGCACCTCTCTCTTCATTAA 58.759 41.667 0.00 0.00 0.00 1.40
2472 4170 4.323028 CCACAAGCACCTCTCTCTTCATTA 60.323 45.833 0.00 0.00 0.00 1.90
2473 4171 3.558746 CCACAAGCACCTCTCTCTTCATT 60.559 47.826 0.00 0.00 0.00 2.57
2474 4172 2.027377 CCACAAGCACCTCTCTCTTCAT 60.027 50.000 0.00 0.00 0.00 2.57
2475 4173 1.345741 CCACAAGCACCTCTCTCTTCA 59.654 52.381 0.00 0.00 0.00 3.02
2476 4174 1.346068 ACCACAAGCACCTCTCTCTTC 59.654 52.381 0.00 0.00 0.00 2.87
2477 4175 1.428869 ACCACAAGCACCTCTCTCTT 58.571 50.000 0.00 0.00 0.00 2.85
2478 4176 2.300437 GTTACCACAAGCACCTCTCTCT 59.700 50.000 0.00 0.00 0.00 3.10
2479 4177 2.300437 AGTTACCACAAGCACCTCTCTC 59.700 50.000 0.00 0.00 0.00 3.20
2480 4178 2.330216 AGTTACCACAAGCACCTCTCT 58.670 47.619 0.00 0.00 0.00 3.10
2481 4179 2.841442 AGTTACCACAAGCACCTCTC 57.159 50.000 0.00 0.00 0.00 3.20
2482 4180 2.028020 GCTAGTTACCACAAGCACCTCT 60.028 50.000 0.00 0.00 35.05 3.69
2483 4181 2.028020 AGCTAGTTACCACAAGCACCTC 60.028 50.000 0.00 0.00 37.44 3.85
2484 4182 1.978580 AGCTAGTTACCACAAGCACCT 59.021 47.619 0.00 0.00 37.44 4.00
2485 4183 2.474410 AGCTAGTTACCACAAGCACC 57.526 50.000 0.00 0.00 37.44 5.01
2486 4184 4.566987 ACTTAGCTAGTTACCACAAGCAC 58.433 43.478 0.00 0.00 37.44 4.40
2487 4185 4.884668 ACTTAGCTAGTTACCACAAGCA 57.115 40.909 0.00 0.00 37.44 3.91
2496 4194 6.377996 TGATGTTCCGGTAACTTAGCTAGTTA 59.622 38.462 0.00 10.09 45.22 2.24
2498 4196 4.708421 TGATGTTCCGGTAACTTAGCTAGT 59.292 41.667 0.00 0.00 38.99 2.57
2499 4197 5.041940 GTGATGTTCCGGTAACTTAGCTAG 58.958 45.833 0.00 0.00 38.99 3.42
2500 4198 4.463539 TGTGATGTTCCGGTAACTTAGCTA 59.536 41.667 0.00 0.00 38.99 3.32
2501 4199 3.259876 TGTGATGTTCCGGTAACTTAGCT 59.740 43.478 0.00 0.00 38.99 3.32
2502 4200 3.370061 GTGTGATGTTCCGGTAACTTAGC 59.630 47.826 0.00 0.00 38.99 3.09
2503 4201 4.387862 GTGTGTGATGTTCCGGTAACTTAG 59.612 45.833 0.00 0.00 38.99 2.18
2504 4202 4.039488 AGTGTGTGATGTTCCGGTAACTTA 59.961 41.667 0.00 0.00 38.99 2.24
2505 4203 3.135994 GTGTGTGATGTTCCGGTAACTT 58.864 45.455 0.00 3.15 38.99 2.66
2506 4204 2.367567 AGTGTGTGATGTTCCGGTAACT 59.632 45.455 0.00 0.00 38.99 2.24
2507 4205 2.735134 GAGTGTGTGATGTTCCGGTAAC 59.265 50.000 0.00 5.56 38.67 2.50
2508 4206 2.289195 GGAGTGTGTGATGTTCCGGTAA 60.289 50.000 0.00 0.00 0.00 2.85
2509 4207 1.274167 GGAGTGTGTGATGTTCCGGTA 59.726 52.381 0.00 0.00 0.00 4.02
2510 4208 0.034896 GGAGTGTGTGATGTTCCGGT 59.965 55.000 0.00 0.00 0.00 5.28
2511 4209 0.034756 TGGAGTGTGTGATGTTCCGG 59.965 55.000 0.00 0.00 0.00 5.14
2512 4210 1.800586 CTTGGAGTGTGTGATGTTCCG 59.199 52.381 0.00 0.00 0.00 4.30
2513 4211 3.126001 TCTTGGAGTGTGTGATGTTCC 57.874 47.619 0.00 0.00 0.00 3.62
2514 4212 4.335315 TGTTTCTTGGAGTGTGTGATGTTC 59.665 41.667 0.00 0.00 0.00 3.18
2515 4213 4.269183 TGTTTCTTGGAGTGTGTGATGTT 58.731 39.130 0.00 0.00 0.00 2.71
2516 4214 3.884895 TGTTTCTTGGAGTGTGTGATGT 58.115 40.909 0.00 0.00 0.00 3.06
2517 4215 4.898829 TTGTTTCTTGGAGTGTGTGATG 57.101 40.909 0.00 0.00 0.00 3.07
2518 4216 5.132502 TCATTGTTTCTTGGAGTGTGTGAT 58.867 37.500 0.00 0.00 0.00 3.06
2519 4217 4.522114 TCATTGTTTCTTGGAGTGTGTGA 58.478 39.130 0.00 0.00 0.00 3.58
2520 4218 4.336433 ACTCATTGTTTCTTGGAGTGTGTG 59.664 41.667 0.00 0.00 37.43 3.82
2521 4219 4.526970 ACTCATTGTTTCTTGGAGTGTGT 58.473 39.130 0.00 0.00 37.43 3.72
2522 4220 4.818546 AGACTCATTGTTTCTTGGAGTGTG 59.181 41.667 0.00 0.00 38.82 3.82
2523 4221 5.041191 AGACTCATTGTTTCTTGGAGTGT 57.959 39.130 0.00 0.00 38.82 3.55
2524 4222 8.660373 GTTATAGACTCATTGTTTCTTGGAGTG 58.340 37.037 0.00 0.00 38.82 3.51
2525 4223 7.824779 GGTTATAGACTCATTGTTTCTTGGAGT 59.175 37.037 0.00 0.00 41.22 3.85
2526 4224 8.043710 AGGTTATAGACTCATTGTTTCTTGGAG 58.956 37.037 0.00 0.00 0.00 3.86
2527 4225 7.918076 AGGTTATAGACTCATTGTTTCTTGGA 58.082 34.615 0.00 0.00 0.00 3.53
2528 4226 9.667107 TTAGGTTATAGACTCATTGTTTCTTGG 57.333 33.333 0.00 0.00 0.00 3.61
2547 4245 9.549078 TCATGCAACGATGTATTTATTAGGTTA 57.451 29.630 0.00 0.00 28.42 2.85
2548 4246 8.342634 GTCATGCAACGATGTATTTATTAGGTT 58.657 33.333 0.00 0.00 28.42 3.50
2549 4247 7.497579 TGTCATGCAACGATGTATTTATTAGGT 59.502 33.333 0.00 0.00 28.42 3.08
2550 4248 7.798516 GTGTCATGCAACGATGTATTTATTAGG 59.201 37.037 0.00 0.00 28.42 2.69
2551 4249 8.551205 AGTGTCATGCAACGATGTATTTATTAG 58.449 33.333 0.00 0.00 28.42 1.73
2552 4250 8.432110 AGTGTCATGCAACGATGTATTTATTA 57.568 30.769 0.00 0.00 28.42 0.98
2553 4251 7.320443 AGTGTCATGCAACGATGTATTTATT 57.680 32.000 0.00 0.00 28.42 1.40
2554 4252 6.925610 AGTGTCATGCAACGATGTATTTAT 57.074 33.333 0.00 0.00 28.42 1.40
2555 4253 6.814146 TGTAGTGTCATGCAACGATGTATTTA 59.186 34.615 0.00 0.00 28.42 1.40
2556 4254 5.641636 TGTAGTGTCATGCAACGATGTATTT 59.358 36.000 0.00 0.00 28.42 1.40
2557 4255 5.175127 TGTAGTGTCATGCAACGATGTATT 58.825 37.500 0.00 0.00 28.42 1.89
2558 4256 4.754322 TGTAGTGTCATGCAACGATGTAT 58.246 39.130 0.00 0.00 31.41 2.29
2559 4257 4.181309 TGTAGTGTCATGCAACGATGTA 57.819 40.909 0.00 0.00 0.00 2.29
2560 4258 3.038788 TGTAGTGTCATGCAACGATGT 57.961 42.857 0.00 0.00 0.00 3.06
2561 4259 5.043248 TCTATGTAGTGTCATGCAACGATG 58.957 41.667 0.00 0.00 0.00 3.84
2562 4260 5.043903 GTCTATGTAGTGTCATGCAACGAT 58.956 41.667 0.00 0.00 0.00 3.73
2563 4261 4.421058 GTCTATGTAGTGTCATGCAACGA 58.579 43.478 0.00 0.00 0.00 3.85
2564 4262 3.240631 CGTCTATGTAGTGTCATGCAACG 59.759 47.826 0.00 0.00 0.00 4.10
2565 4263 4.174009 ACGTCTATGTAGTGTCATGCAAC 58.826 43.478 0.00 0.00 0.00 4.17
2566 4264 4.450082 ACGTCTATGTAGTGTCATGCAA 57.550 40.909 0.00 0.00 0.00 4.08
2567 4265 4.421058 GAACGTCTATGTAGTGTCATGCA 58.579 43.478 0.00 0.00 0.00 3.96
2568 4266 3.797256 GGAACGTCTATGTAGTGTCATGC 59.203 47.826 0.00 0.00 0.00 4.06
2569 4267 5.250235 AGGAACGTCTATGTAGTGTCATG 57.750 43.478 0.00 0.00 0.00 3.07
2570 4268 5.298777 GGTAGGAACGTCTATGTAGTGTCAT 59.701 44.000 0.00 0.00 0.00 3.06
2571 4269 4.637534 GGTAGGAACGTCTATGTAGTGTCA 59.362 45.833 0.00 0.00 0.00 3.58
2572 4270 4.036144 GGGTAGGAACGTCTATGTAGTGTC 59.964 50.000 0.00 0.00 0.00 3.67
2573 4271 3.950395 GGGTAGGAACGTCTATGTAGTGT 59.050 47.826 0.00 0.00 0.00 3.55
2574 4272 3.949754 TGGGTAGGAACGTCTATGTAGTG 59.050 47.826 0.00 0.00 0.00 2.74
2575 4273 3.950395 GTGGGTAGGAACGTCTATGTAGT 59.050 47.826 0.00 0.00 0.00 2.73
2576 4274 4.205587 AGTGGGTAGGAACGTCTATGTAG 58.794 47.826 0.00 0.00 0.00 2.74
2577 4275 4.240881 AGTGGGTAGGAACGTCTATGTA 57.759 45.455 0.00 0.00 0.00 2.29
2578 4276 3.097342 AGTGGGTAGGAACGTCTATGT 57.903 47.619 0.00 0.00 0.00 2.29
2579 4277 4.022242 CCATAGTGGGTAGGAACGTCTATG 60.022 50.000 7.70 7.70 34.60 2.23
2580 4278 4.141088 TCCATAGTGGGTAGGAACGTCTAT 60.141 45.833 0.00 0.00 38.32 1.98
2581 4279 3.202818 TCCATAGTGGGTAGGAACGTCTA 59.797 47.826 0.00 0.00 38.32 2.59
2582 4280 2.024655 TCCATAGTGGGTAGGAACGTCT 60.025 50.000 0.00 0.00 38.32 4.18
2583 4281 2.361438 CTCCATAGTGGGTAGGAACGTC 59.639 54.545 0.00 0.00 38.32 4.34
2584 4282 2.385803 CTCCATAGTGGGTAGGAACGT 58.614 52.381 0.00 0.00 38.32 3.99
2585 4283 1.687123 CCTCCATAGTGGGTAGGAACG 59.313 57.143 0.00 0.00 38.32 3.95
2586 4284 2.760581 ACCTCCATAGTGGGTAGGAAC 58.239 52.381 9.90 0.00 38.32 3.62
2587 4285 4.194678 CTACCTCCATAGTGGGTAGGAA 57.805 50.000 9.90 0.00 45.09 3.36
2588 4286 3.897657 CTACCTCCATAGTGGGTAGGA 57.102 52.381 9.90 0.00 45.09 2.94
2591 4289 5.470755 TGTTACTACCTCCATAGTGGGTA 57.529 43.478 0.00 0.00 38.32 3.69
2592 4290 4.341863 TGTTACTACCTCCATAGTGGGT 57.658 45.455 0.00 0.00 38.32 4.51
2593 4291 6.075984 ACTATGTTACTACCTCCATAGTGGG 58.924 44.000 9.63 0.00 44.96 4.61
2594 4292 7.005296 AGACTATGTTACTACCTCCATAGTGG 58.995 42.308 14.01 0.00 46.02 4.00
2595 4293 9.221933 CTAGACTATGTTACTACCTCCATAGTG 57.778 40.741 14.01 0.00 46.02 2.74
2597 4295 7.830201 CCCTAGACTATGTTACTACCTCCATAG 59.170 44.444 0.00 0.00 41.50 2.23
2598 4296 7.518653 TCCCTAGACTATGTTACTACCTCCATA 59.481 40.741 0.00 0.00 0.00 2.74
2599 4297 6.334774 TCCCTAGACTATGTTACTACCTCCAT 59.665 42.308 0.00 0.00 0.00 3.41
2600 4298 5.673574 TCCCTAGACTATGTTACTACCTCCA 59.326 44.000 0.00 0.00 0.00 3.86
2601 4299 6.198237 TCCCTAGACTATGTTACTACCTCC 57.802 45.833 0.00 0.00 0.00 4.30
2602 4300 7.229106 CACTTCCCTAGACTATGTTACTACCTC 59.771 44.444 0.00 0.00 0.00 3.85
2603 4301 7.061688 CACTTCCCTAGACTATGTTACTACCT 58.938 42.308 0.00 0.00 0.00 3.08
2604 4302 6.832900 ACACTTCCCTAGACTATGTTACTACC 59.167 42.308 0.00 0.00 0.00 3.18
2605 4303 7.338957 ACACACTTCCCTAGACTATGTTACTAC 59.661 40.741 0.00 0.00 0.00 2.73
2606 4304 7.408543 ACACACTTCCCTAGACTATGTTACTA 58.591 38.462 0.00 0.00 0.00 1.82
2607 4305 6.254522 ACACACTTCCCTAGACTATGTTACT 58.745 40.000 0.00 0.00 0.00 2.24
2608 4306 6.527057 ACACACTTCCCTAGACTATGTTAC 57.473 41.667 0.00 0.00 0.00 2.50
2609 4307 7.892241 ACTTACACACTTCCCTAGACTATGTTA 59.108 37.037 0.00 0.00 0.00 2.41
2610 4308 6.724905 ACTTACACACTTCCCTAGACTATGTT 59.275 38.462 0.00 0.00 0.00 2.71
2611 4309 6.254522 ACTTACACACTTCCCTAGACTATGT 58.745 40.000 0.00 0.00 0.00 2.29
2612 4310 6.777213 ACTTACACACTTCCCTAGACTATG 57.223 41.667 0.00 0.00 0.00 2.23
2613 4311 8.114743 AGTAACTTACACACTTCCCTAGACTAT 58.885 37.037 1.79 0.00 0.00 2.12
2614 4312 7.465116 AGTAACTTACACACTTCCCTAGACTA 58.535 38.462 1.79 0.00 0.00 2.59
2615 4313 6.313324 AGTAACTTACACACTTCCCTAGACT 58.687 40.000 1.79 0.00 0.00 3.24
2616 4314 6.587206 AGTAACTTACACACTTCCCTAGAC 57.413 41.667 1.79 0.00 0.00 2.59
2617 4315 6.376581 GCTAGTAACTTACACACTTCCCTAGA 59.623 42.308 1.79 0.00 0.00 2.43
2618 4316 6.377712 AGCTAGTAACTTACACACTTCCCTAG 59.622 42.308 1.79 0.00 0.00 3.02
2619 4317 6.251471 AGCTAGTAACTTACACACTTCCCTA 58.749 40.000 1.79 0.00 0.00 3.53
2620 4318 5.085219 AGCTAGTAACTTACACACTTCCCT 58.915 41.667 1.79 0.00 0.00 4.20
2621 4319 5.402997 AGCTAGTAACTTACACACTTCCC 57.597 43.478 1.79 0.00 0.00 3.97
2622 4320 8.033626 ACATAAGCTAGTAACTTACACACTTCC 58.966 37.037 1.79 0.00 32.67 3.46
2623 4321 8.983307 ACATAAGCTAGTAACTTACACACTTC 57.017 34.615 1.79 0.00 32.67 3.01
2624 4322 9.420551 GAACATAAGCTAGTAACTTACACACTT 57.579 33.333 1.79 4.31 32.67 3.16
2625 4323 8.804204 AGAACATAAGCTAGTAACTTACACACT 58.196 33.333 1.79 0.00 32.67 3.55
2626 4324 8.983307 AGAACATAAGCTAGTAACTTACACAC 57.017 34.615 1.79 0.00 32.67 3.82
2627 4325 9.419297 CAAGAACATAAGCTAGTAACTTACACA 57.581 33.333 1.79 0.00 32.67 3.72
2628 4326 8.381387 GCAAGAACATAAGCTAGTAACTTACAC 58.619 37.037 1.79 0.00 32.67 2.90
2629 4327 7.548075 GGCAAGAACATAAGCTAGTAACTTACA 59.452 37.037 1.79 0.00 32.67 2.41
2630 4328 7.011202 GGGCAAGAACATAAGCTAGTAACTTAC 59.989 40.741 0.00 0.00 32.67 2.34
2631 4329 7.046033 GGGCAAGAACATAAGCTAGTAACTTA 58.954 38.462 0.00 0.00 34.29 2.24
2632 4330 5.880887 GGGCAAGAACATAAGCTAGTAACTT 59.119 40.000 0.00 0.00 0.00 2.66
2633 4331 5.045869 TGGGCAAGAACATAAGCTAGTAACT 60.046 40.000 0.00 0.00 0.00 2.24
2634 4332 5.183228 TGGGCAAGAACATAAGCTAGTAAC 58.817 41.667 0.00 0.00 0.00 2.50
2635 4333 5.429681 TGGGCAAGAACATAAGCTAGTAA 57.570 39.130 0.00 0.00 0.00 2.24
2636 4334 5.630415 ATGGGCAAGAACATAAGCTAGTA 57.370 39.130 0.00 0.00 0.00 1.82
2637 4335 4.510167 ATGGGCAAGAACATAAGCTAGT 57.490 40.909 0.00 0.00 0.00 2.57
2638 4336 4.641989 ACAATGGGCAAGAACATAAGCTAG 59.358 41.667 0.00 0.00 0.00 3.42
2639 4337 4.398988 CACAATGGGCAAGAACATAAGCTA 59.601 41.667 0.00 0.00 0.00 3.32
2640 4338 3.194116 CACAATGGGCAAGAACATAAGCT 59.806 43.478 0.00 0.00 0.00 3.74
2641 4339 3.193267 TCACAATGGGCAAGAACATAAGC 59.807 43.478 0.00 0.00 0.00 3.09
2642 4340 4.380867 GGTCACAATGGGCAAGAACATAAG 60.381 45.833 0.00 0.00 0.00 1.73
2643 4341 3.509575 GGTCACAATGGGCAAGAACATAA 59.490 43.478 0.00 0.00 0.00 1.90
2644 4342 3.088532 GGTCACAATGGGCAAGAACATA 58.911 45.455 0.00 0.00 0.00 2.29
2645 4343 1.895131 GGTCACAATGGGCAAGAACAT 59.105 47.619 0.00 0.00 0.00 2.71
2646 4344 1.327303 GGTCACAATGGGCAAGAACA 58.673 50.000 0.00 0.00 0.00 3.18
2647 4345 1.270550 CTGGTCACAATGGGCAAGAAC 59.729 52.381 0.00 0.00 0.00 3.01
2648 4346 1.619654 CTGGTCACAATGGGCAAGAA 58.380 50.000 0.00 0.00 0.00 2.52
2649 4347 0.895100 GCTGGTCACAATGGGCAAGA 60.895 55.000 0.00 0.00 0.00 3.02
2650 4348 1.588082 GCTGGTCACAATGGGCAAG 59.412 57.895 0.00 0.00 0.00 4.01
2651 4349 1.907807 GGCTGGTCACAATGGGCAA 60.908 57.895 0.00 0.00 0.00 4.52
2652 4350 2.283101 GGCTGGTCACAATGGGCA 60.283 61.111 0.00 0.00 0.00 5.36
2653 4351 0.323360 TAAGGCTGGTCACAATGGGC 60.323 55.000 0.00 0.00 0.00 5.36
2654 4352 2.442236 ATAAGGCTGGTCACAATGGG 57.558 50.000 0.00 0.00 0.00 4.00
2655 4353 5.593909 TGAATTATAAGGCTGGTCACAATGG 59.406 40.000 0.00 0.00 0.00 3.16
2656 4354 6.319658 AGTGAATTATAAGGCTGGTCACAATG 59.680 38.462 12.13 0.00 37.07 2.82
2657 4355 6.426587 AGTGAATTATAAGGCTGGTCACAAT 58.573 36.000 12.13 0.00 37.07 2.71
2658 4356 5.815581 AGTGAATTATAAGGCTGGTCACAA 58.184 37.500 12.13 0.00 37.07 3.33
2659 4357 5.435686 AGTGAATTATAAGGCTGGTCACA 57.564 39.130 12.13 0.00 37.07 3.58
2660 4358 8.345565 CAAATAGTGAATTATAAGGCTGGTCAC 58.654 37.037 0.00 0.00 35.30 3.67
2661 4359 7.013274 GCAAATAGTGAATTATAAGGCTGGTCA 59.987 37.037 0.00 0.00 0.00 4.02
2662 4360 7.229506 AGCAAATAGTGAATTATAAGGCTGGTC 59.770 37.037 0.00 0.00 0.00 4.02
2663 4361 7.013655 CAGCAAATAGTGAATTATAAGGCTGGT 59.986 37.037 0.00 0.00 39.94 4.00
2664 4362 7.365741 CAGCAAATAGTGAATTATAAGGCTGG 58.634 38.462 0.00 0.00 39.94 4.85
2665 4363 7.013655 ACCAGCAAATAGTGAATTATAAGGCTG 59.986 37.037 0.00 0.00 42.41 4.85
2666 4364 7.062957 ACCAGCAAATAGTGAATTATAAGGCT 58.937 34.615 0.00 0.00 0.00 4.58
2667 4365 7.277174 ACCAGCAAATAGTGAATTATAAGGC 57.723 36.000 0.00 0.00 0.00 4.35
2680 4378 9.216117 ACTACTTGTAGTAAAACCAGCAAATAG 57.784 33.333 11.27 0.00 29.00 1.73
2710 4408 5.877564 TGACATTAACTTCATGCGTATCCAA 59.122 36.000 0.00 0.00 0.00 3.53
2732 4430 3.001514 GCTTCCTCCCTGGCATGA 58.998 61.111 0.00 0.00 35.26 3.07
2751 4449 6.186234 ACTAATTTAGACTGGTACTCCTCGT 58.814 40.000 10.39 0.00 34.23 4.18
2818 4516 5.183713 TCTTGCCAACACAAATATTCTCAGG 59.816 40.000 0.00 0.00 0.00 3.86
2819 4517 6.088824 GTCTTGCCAACACAAATATTCTCAG 58.911 40.000 0.00 0.00 0.00 3.35
2820 4518 5.534278 TGTCTTGCCAACACAAATATTCTCA 59.466 36.000 0.00 0.00 0.00 3.27
2829 4527 0.388659 GCCATGTCTTGCCAACACAA 59.611 50.000 0.00 0.00 0.00 3.33
2864 4562 6.779860 AGGCGAATGTTATATAATCACCCTT 58.220 36.000 0.00 0.00 0.00 3.95
2866 4564 8.448615 GTTTAGGCGAATGTTATATAATCACCC 58.551 37.037 0.00 0.00 0.00 4.61
2887 4585 8.331022 CAAAATGGAGATCTGTCATACGTTTAG 58.669 37.037 0.00 0.00 0.00 1.85
2911 4609 8.415950 TTGCAGAGGGAGTAAAATTTTATCAA 57.584 30.769 13.54 5.25 0.00 2.57
2912 4610 8.415950 TTTGCAGAGGGAGTAAAATTTTATCA 57.584 30.769 13.54 0.00 0.00 2.15
2913 4611 8.739972 TCTTTGCAGAGGGAGTAAAATTTTATC 58.260 33.333 13.54 11.31 0.00 1.75
2922 4620 8.768397 TCTTATATTTCTTTGCAGAGGGAGTAA 58.232 33.333 4.15 0.00 0.00 2.24
2972 4670 8.997621 ACAAGAGCGTTTAATTAGATCACTAA 57.002 30.769 0.00 0.00 41.87 2.24
2988 4686 7.069578 TCCCTCTATAAAGAAATACAAGAGCGT 59.930 37.037 0.00 0.00 0.00 5.07
2989 4687 7.434492 TCCCTCTATAAAGAAATACAAGAGCG 58.566 38.462 0.00 0.00 0.00 5.03
2990 4688 8.425703 ACTCCCTCTATAAAGAAATACAAGAGC 58.574 37.037 0.00 0.00 0.00 4.09
3006 4704 9.041354 GGATCTGATAAAACATACTCCCTCTAT 57.959 37.037 0.00 0.00 0.00 1.98
3007 4705 8.010697 TGGATCTGATAAAACATACTCCCTCTA 58.989 37.037 0.00 0.00 0.00 2.43
3008 4706 6.846505 TGGATCTGATAAAACATACTCCCTCT 59.153 38.462 0.00 0.00 0.00 3.69
3009 4707 7.067496 TGGATCTGATAAAACATACTCCCTC 57.933 40.000 0.00 0.00 0.00 4.30
3010 4708 7.092444 TGTTGGATCTGATAAAACATACTCCCT 60.092 37.037 11.52 0.00 0.00 4.20
3011 4709 7.054124 TGTTGGATCTGATAAAACATACTCCC 58.946 38.462 11.52 0.00 0.00 4.30
3012 4710 8.506168 TTGTTGGATCTGATAAAACATACTCC 57.494 34.615 14.70 0.47 31.34 3.85
3014 4712 9.685276 TGATTGTTGGATCTGATAAAACATACT 57.315 29.630 14.70 6.64 31.34 2.12
3015 4713 9.722056 GTGATTGTTGGATCTGATAAAACATAC 57.278 33.333 14.70 12.54 31.34 2.39
3018 4716 6.152661 GGGTGATTGTTGGATCTGATAAAACA 59.847 38.462 11.52 11.52 0.00 2.83
3019 4717 6.378280 AGGGTGATTGTTGGATCTGATAAAAC 59.622 38.462 7.60 7.60 0.00 2.43
3020 4718 6.377996 CAGGGTGATTGTTGGATCTGATAAAA 59.622 38.462 0.00 0.00 0.00 1.52
3021 4719 5.887598 CAGGGTGATTGTTGGATCTGATAAA 59.112 40.000 0.00 0.00 0.00 1.40
3022 4720 5.439721 CAGGGTGATTGTTGGATCTGATAA 58.560 41.667 0.00 0.00 0.00 1.75
3023 4721 4.686944 GCAGGGTGATTGTTGGATCTGATA 60.687 45.833 0.00 0.00 0.00 2.15
3049 4808 8.806429 TCACTTTGGATGATGCTATCTAAAAA 57.194 30.769 0.00 0.00 37.18 1.94
3071 4830 3.320673 AGTAGCTACTGCCACTTTCAC 57.679 47.619 25.52 0.00 37.90 3.18
3087 4846 1.036707 GGCCTGCTGAGGAGTAGTAG 58.963 60.000 0.00 0.00 42.93 2.57
3090 4849 0.107945 GTTGGCCTGCTGAGGAGTAG 60.108 60.000 3.32 0.00 42.93 2.57
3101 4860 2.289945 ACAGCTCTTTCTAGTTGGCCTG 60.290 50.000 3.32 0.00 32.48 4.85
3110 4869 6.451064 TGATGATTCGTACAGCTCTTTCTA 57.549 37.500 0.00 0.00 0.00 2.10
3131 4890 0.456628 TAATCGGAACCACGCGATGA 59.543 50.000 15.93 0.00 34.22 2.92
3145 4904 9.987901 GTGTCAACAATTACAAAATGTTAATCG 57.012 29.630 0.00 0.00 0.00 3.34
3148 4907 9.823647 ATGGTGTCAACAATTACAAAATGTTAA 57.176 25.926 0.00 0.00 0.00 2.01
3150 4909 7.768120 ACATGGTGTCAACAATTACAAAATGTT 59.232 29.630 0.00 0.00 33.48 2.71
3155 4914 6.036517 GCAAACATGGTGTCAACAATTACAAA 59.963 34.615 0.00 0.00 0.00 2.83
3165 4924 2.546368 GAGTACGCAAACATGGTGTCAA 59.454 45.455 0.00 0.00 0.00 3.18
3204 4963 4.649267 TGACATGGAACCAATGGAGTTA 57.351 40.909 6.16 0.00 0.00 2.24
3206 4965 3.624777 GATGACATGGAACCAATGGAGT 58.375 45.455 6.16 0.00 0.00 3.85
3207 4966 2.954318 GGATGACATGGAACCAATGGAG 59.046 50.000 6.16 0.00 0.00 3.86
3223 4982 7.921304 ACTATATAGCATTGTGGATTGGATGA 58.079 34.615 9.78 0.00 0.00 2.92
3233 4992 8.749354 TCCCTGTACATACTATATAGCATTGTG 58.251 37.037 9.78 2.38 0.00 3.33
3234 4993 8.895141 TCCCTGTACATACTATATAGCATTGT 57.105 34.615 9.78 12.35 0.00 2.71
3253 7239 2.027377 CACTGAGCTTCATCTTCCCTGT 60.027 50.000 0.00 0.00 0.00 4.00
3272 7258 1.400846 CAGGCAGAATCAGCACATCAC 59.599 52.381 0.00 0.00 0.00 3.06
3275 7261 0.622136 TCCAGGCAGAATCAGCACAT 59.378 50.000 0.00 0.00 0.00 3.21
3299 7285 4.098654 ACTCCTGTAGATGCATACTGTGAC 59.901 45.833 0.00 0.00 0.00 3.67
3307 7293 9.142014 GGATCTAATATACTCCTGTAGATGCAT 57.858 37.037 0.00 0.00 38.67 3.96
3328 7314 2.430332 GCTGCTAGTCTGTGAAGGATCT 59.570 50.000 0.00 0.00 0.00 2.75
3348 7334 3.375922 TGAATTTACGGATTTTCGGGAGC 59.624 43.478 0.00 0.00 0.00 4.70


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.