Multiple sequence alignment - TraesCS2B01G023800

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G023800 chr2B 100.000 4920 0 0 1 4920 11075085 11080004 0.000000e+00 9086.0
1 TraesCS2B01G023800 chr2A 92.660 3801 113 60 978 4671 262132 258391 0.000000e+00 5321.0
2 TraesCS2B01G023800 chr2A 78.923 427 26 19 1 388 262985 262584 1.070000e-56 231.0
3 TraesCS2B01G023800 chr2D 92.255 3809 113 58 978 4671 273698 277439 0.000000e+00 5232.0
4 TraesCS2B01G023800 chr2D 95.455 66 3 0 327 392 272939 273004 6.740000e-19 106.0
5 TraesCS2B01G023800 chr2D 91.781 73 4 2 458 529 273033 273104 3.130000e-17 100.0
6 TraesCS2B01G023800 chr6D 80.916 524 93 6 1139 1657 462484688 462485209 1.650000e-109 407.0
7 TraesCS2B01G023800 chr6D 100.000 28 0 0 2757 2784 419267067 419267040 9.000000e-03 52.8
8 TraesCS2B01G023800 chr6B 81.612 484 84 4 1139 1618 704971903 704972385 3.570000e-106 396.0
9 TraesCS2B01G023800 chr6B 79.930 284 52 4 1157 1436 562489849 562489567 2.320000e-48 204.0
10 TraesCS2B01G023800 chr6B 100.000 28 0 0 2757 2784 632180649 632180622 9.000000e-03 52.8
11 TraesCS2B01G023800 chr6A 81.612 484 84 4 1139 1618 609285944 609286426 3.570000e-106 396.0
12 TraesCS2B01G023800 chr6A 71.086 1169 269 44 1157 2271 562688500 562687347 6.410000e-54 222.0
13 TraesCS2B01G023800 chr6A 79.859 283 54 2 1157 1436 517559719 517559437 2.320000e-48 204.0
14 TraesCS2B01G023800 chr6A 100.000 28 0 0 2757 2784 562686924 562686897 9.000000e-03 52.8
15 TraesCS2B01G023800 chr4B 84.800 125 17 2 1270 1393 43226105 43225982 1.860000e-24 124.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G023800 chr2B 11075085 11080004 4919 False 9086.000000 9086 100.000000 1 4920 1 chr2B.!!$F1 4919
1 TraesCS2B01G023800 chr2A 258391 262985 4594 True 2776.000000 5321 85.791500 1 4671 2 chr2A.!!$R1 4670
2 TraesCS2B01G023800 chr2D 272939 277439 4500 False 1812.666667 5232 93.163667 327 4671 3 chr2D.!!$F1 4344
3 TraesCS2B01G023800 chr6D 462484688 462485209 521 False 407.000000 407 80.916000 1139 1657 1 chr6D.!!$F1 518

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
36 37 0.043334 CTCCTTCCTCCCTTCCTCCA 59.957 60.0 0.0 0.0 0.00 3.86 F
1029 1375 0.102481 CCATGGCAGCAAGAGCAATC 59.898 55.0 0.0 0.0 45.49 2.67 F
1929 2315 0.178068 TGAGGGAAACGAGCTATGCC 59.822 55.0 0.0 0.0 0.00 4.40 F
2418 2804 0.465460 GGTGTCTGTGTGGCTCCAAA 60.465 55.0 0.0 0.0 34.34 3.28 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1701 2087 0.311477 GCGACTCGGTTATCTCCCTC 59.689 60.0 0.00 0.00 0.00 4.30 R
2046 2432 0.104671 GCATCAGCTGAGACTCCTCC 59.895 60.0 22.96 0.27 38.66 4.30 R
3319 3724 0.041312 ACATCAAGCAAACGACACGC 60.041 50.0 0.00 0.00 0.00 5.34 R
4208 4669 0.113580 GGTTGCCCCCAAAGGAGTTA 59.886 55.0 0.00 0.00 38.24 2.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 2.770475 GGCTCCCCTCCTTCCTCC 60.770 72.222 0.00 0.00 0.00 4.30
28 29 2.770475 GCTCCCCTCCTTCCTCCC 60.770 72.222 0.00 0.00 0.00 4.30
29 30 3.124088 CTCCCCTCCTTCCTCCCT 58.876 66.667 0.00 0.00 0.00 4.20
36 37 0.043334 CTCCTTCCTCCCTTCCTCCA 59.957 60.000 0.00 0.00 0.00 3.86
42 43 1.268283 CCTCCCTTCCTCCACACCTC 61.268 65.000 0.00 0.00 0.00 3.85
43 44 1.229529 TCCCTTCCTCCACACCTCC 60.230 63.158 0.00 0.00 0.00 4.30
70 71 1.118838 CCTCCCTGCTTCCTACTCTG 58.881 60.000 0.00 0.00 0.00 3.35
74 75 1.484038 CCTGCTTCCTACTCTGCTCT 58.516 55.000 0.00 0.00 0.00 4.09
76 77 2.622942 CCTGCTTCCTACTCTGCTCTAG 59.377 54.545 0.00 0.00 0.00 2.43
77 78 2.622942 CTGCTTCCTACTCTGCTCTAGG 59.377 54.545 0.00 0.00 0.00 3.02
94 105 2.434331 GCTGTAGCCCACCAACCA 59.566 61.111 0.00 0.00 34.31 3.67
115 130 3.184291 CCCCCATCCATCCATCCC 58.816 66.667 0.00 0.00 0.00 3.85
116 131 1.779644 CCCCCATCCATCCATCCCA 60.780 63.158 0.00 0.00 0.00 4.37
117 132 1.151083 CCCCCATCCATCCATCCCAT 61.151 60.000 0.00 0.00 0.00 4.00
119 134 0.333993 CCCATCCATCCATCCCATCC 59.666 60.000 0.00 0.00 0.00 3.51
120 135 1.078115 CCATCCATCCATCCCATCCA 58.922 55.000 0.00 0.00 0.00 3.41
121 136 1.644337 CCATCCATCCATCCCATCCAT 59.356 52.381 0.00 0.00 0.00 3.41
131 146 4.586235 CCATCCATCCCCCACCGC 62.586 72.222 0.00 0.00 0.00 5.68
151 166 2.609610 CGGTGGGAAGGGAAGGGA 60.610 66.667 0.00 0.00 0.00 4.20
152 167 2.228480 CGGTGGGAAGGGAAGGGAA 61.228 63.158 0.00 0.00 0.00 3.97
153 168 1.691823 GGTGGGAAGGGAAGGGAAG 59.308 63.158 0.00 0.00 0.00 3.46
154 169 1.691823 GTGGGAAGGGAAGGGAAGG 59.308 63.158 0.00 0.00 0.00 3.46
155 170 1.543896 TGGGAAGGGAAGGGAAGGG 60.544 63.158 0.00 0.00 0.00 3.95
156 171 1.230182 GGGAAGGGAAGGGAAGGGA 60.230 63.158 0.00 0.00 0.00 4.20
157 172 0.849540 GGGAAGGGAAGGGAAGGGAA 60.850 60.000 0.00 0.00 0.00 3.97
158 173 0.626382 GGAAGGGAAGGGAAGGGAAG 59.374 60.000 0.00 0.00 0.00 3.46
159 174 0.626382 GAAGGGAAGGGAAGGGAAGG 59.374 60.000 0.00 0.00 0.00 3.46
160 175 0.851332 AAGGGAAGGGAAGGGAAGGG 60.851 60.000 0.00 0.00 0.00 3.95
161 176 1.230182 GGGAAGGGAAGGGAAGGGA 60.230 63.158 0.00 0.00 0.00 4.20
162 177 0.849540 GGGAAGGGAAGGGAAGGGAA 60.850 60.000 0.00 0.00 0.00 3.97
163 178 0.626382 GGAAGGGAAGGGAAGGGAAG 59.374 60.000 0.00 0.00 0.00 3.46
164 179 0.626382 GAAGGGAAGGGAAGGGAAGG 59.374 60.000 0.00 0.00 0.00 3.46
165 180 0.851332 AAGGGAAGGGAAGGGAAGGG 60.851 60.000 0.00 0.00 0.00 3.95
166 181 1.230182 GGGAAGGGAAGGGAAGGGA 60.230 63.158 0.00 0.00 0.00 4.20
167 182 1.282653 GGGAAGGGAAGGGAAGGGAG 61.283 65.000 0.00 0.00 0.00 4.30
168 183 1.282653 GGAAGGGAAGGGAAGGGAGG 61.283 65.000 0.00 0.00 0.00 4.30
169 184 1.230314 AAGGGAAGGGAAGGGAGGG 60.230 63.158 0.00 0.00 0.00 4.30
233 254 4.020662 TCCCTTCTTCTTCTTCTTGCTCTC 60.021 45.833 0.00 0.00 0.00 3.20
247 268 2.038813 TCTCTGGATCCACCGCCA 59.961 61.111 11.44 0.00 42.61 5.69
275 296 4.963428 CGTAGCCGCCCCGATTCC 62.963 72.222 0.00 0.00 0.00 3.01
277 298 2.847234 TAGCCGCCCCGATTCCAT 60.847 61.111 0.00 0.00 0.00 3.41
412 454 0.997196 CGCAGGTCCGTAGCTTTTAC 59.003 55.000 0.00 0.00 0.00 2.01
414 456 2.159338 CGCAGGTCCGTAGCTTTTACTA 60.159 50.000 0.00 0.00 0.00 1.82
415 457 3.490419 CGCAGGTCCGTAGCTTTTACTAT 60.490 47.826 0.00 0.00 0.00 2.12
418 460 5.006455 GCAGGTCCGTAGCTTTTACTATTTC 59.994 44.000 0.00 0.00 0.00 2.17
419 461 6.338937 CAGGTCCGTAGCTTTTACTATTTCT 58.661 40.000 0.00 0.00 0.00 2.52
421 463 7.010275 CAGGTCCGTAGCTTTTACTATTTCTTC 59.990 40.741 0.00 0.00 0.00 2.87
422 464 7.040494 GGTCCGTAGCTTTTACTATTTCTTCT 58.960 38.462 0.00 0.00 0.00 2.85
423 465 7.548427 GGTCCGTAGCTTTTACTATTTCTTCTT 59.452 37.037 0.00 0.00 0.00 2.52
478 520 6.648725 GGAGTACACTACTAGTATAAGTCCGG 59.351 46.154 2.33 0.00 39.59 5.14
530 572 6.442513 GATTTCGTTCCTGAATGAATTCCT 57.557 37.500 13.65 0.00 43.43 3.36
531 573 7.553881 GATTTCGTTCCTGAATGAATTCCTA 57.446 36.000 13.65 1.67 43.43 2.94
533 575 7.553881 TTTCGTTCCTGAATGAATTCCTATC 57.446 36.000 13.65 0.00 43.43 2.08
535 577 5.366768 TCGTTCCTGAATGAATTCCTATCCT 59.633 40.000 2.27 0.00 35.97 3.24
536 578 6.553476 TCGTTCCTGAATGAATTCCTATCCTA 59.447 38.462 2.27 0.00 35.97 2.94
537 579 7.235606 TCGTTCCTGAATGAATTCCTATCCTAT 59.764 37.037 2.27 0.00 35.97 2.57
539 581 8.601546 GTTCCTGAATGAATTCCTATCCTATCT 58.398 37.037 2.27 0.00 35.97 1.98
540 582 8.748179 TCCTGAATGAATTCCTATCCTATCTT 57.252 34.615 2.27 0.00 35.97 2.40
581 644 9.561270 AAGAAAGAAAGAAAGAAAGAAAGAACG 57.439 29.630 0.00 0.00 0.00 3.95
582 645 8.947115 AGAAAGAAAGAAAGAAAGAAAGAACGA 58.053 29.630 0.00 0.00 0.00 3.85
583 646 9.556030 GAAAGAAAGAAAGAAAGAAAGAACGAA 57.444 29.630 0.00 0.00 0.00 3.85
584 647 8.897457 AAGAAAGAAAGAAAGAAAGAACGAAC 57.103 30.769 0.00 0.00 0.00 3.95
585 648 7.180748 AGAAAGAAAGAAAGAAAGAACGAACG 58.819 34.615 0.00 0.00 0.00 3.95
586 649 6.657836 AAGAAAGAAAGAAAGAACGAACGA 57.342 33.333 0.14 0.00 0.00 3.85
587 650 6.657836 AGAAAGAAAGAAAGAACGAACGAA 57.342 33.333 0.14 0.00 0.00 3.85
588 651 6.476051 AGAAAGAAAGAAAGAACGAACGAAC 58.524 36.000 0.14 0.00 0.00 3.95
589 652 4.433382 AGAAAGAAAGAACGAACGAACG 57.567 40.909 0.14 0.00 39.31 3.95
590 653 4.107622 AGAAAGAAAGAACGAACGAACGA 58.892 39.130 11.97 0.00 37.03 3.85
591 654 4.563976 AGAAAGAAAGAACGAACGAACGAA 59.436 37.500 11.97 0.00 37.03 3.85
592 655 4.845621 AAGAAAGAACGAACGAACGAAA 57.154 36.364 11.97 0.00 37.03 3.46
593 656 4.433382 AGAAAGAACGAACGAACGAAAG 57.567 40.909 11.97 0.00 37.03 2.62
594 657 4.107622 AGAAAGAACGAACGAACGAAAGA 58.892 39.130 11.97 0.00 37.03 2.52
595 658 3.830854 AAGAACGAACGAACGAAAGAC 57.169 42.857 11.97 0.00 37.03 3.01
620 683 6.616017 GTGAATTTTGGTCAGAGGATTTCTC 58.384 40.000 0.00 0.00 42.75 2.87
654 720 6.268566 ACATCTTGTTGCTTTTCTGTTTCTC 58.731 36.000 0.00 0.00 0.00 2.87
660 726 7.333528 TGTTGCTTTTCTGTTTCTCACTTAT 57.666 32.000 0.00 0.00 0.00 1.73
662 728 8.898761 TGTTGCTTTTCTGTTTCTCACTTATTA 58.101 29.630 0.00 0.00 0.00 0.98
663 729 9.170584 GTTGCTTTTCTGTTTCTCACTTATTAC 57.829 33.333 0.00 0.00 0.00 1.89
666 732 9.387123 GCTTTTCTGTTTCTCACTTATTACTTG 57.613 33.333 0.00 0.00 0.00 3.16
674 740 9.556030 GTTTCTCACTTATTACTTGTTATTGGC 57.444 33.333 0.00 0.00 0.00 4.52
680 751 6.602009 ACTTATTACTTGTTATTGGCAGGGAC 59.398 38.462 0.00 0.00 0.00 4.46
684 755 4.159557 ACTTGTTATTGGCAGGGACAAAT 58.840 39.130 11.10 1.61 32.77 2.32
714 785 8.712285 AAAGATTTGCGATTGATTCATTCATT 57.288 26.923 8.75 0.00 33.34 2.57
715 786 7.925703 AGATTTGCGATTGATTCATTCATTC 57.074 32.000 8.75 0.00 33.34 2.67
716 787 6.921857 AGATTTGCGATTGATTCATTCATTCC 59.078 34.615 8.75 0.00 33.18 3.01
717 788 5.579564 TTGCGATTGATTCATTCATTCCA 57.420 34.783 8.75 0.00 33.18 3.53
718 789 5.777850 TGCGATTGATTCATTCATTCCAT 57.222 34.783 8.75 0.00 33.18 3.41
719 790 6.151663 TGCGATTGATTCATTCATTCCATT 57.848 33.333 8.75 0.00 33.18 3.16
720 791 5.980715 TGCGATTGATTCATTCATTCCATTG 59.019 36.000 8.75 0.00 33.18 2.82
721 792 6.183360 TGCGATTGATTCATTCATTCCATTGA 60.183 34.615 8.75 0.00 33.18 2.57
722 793 6.866770 GCGATTGATTCATTCATTCCATTGAT 59.133 34.615 8.75 0.00 33.18 2.57
723 794 7.384115 GCGATTGATTCATTCATTCCATTGATT 59.616 33.333 8.75 0.00 33.18 2.57
724 795 9.256477 CGATTGATTCATTCATTCCATTGATTT 57.744 29.630 8.75 0.00 33.18 2.17
734 805 9.899661 ATTCATTCCATTGATTTGATTGATTGT 57.100 25.926 0.00 0.00 0.00 2.71
735 806 9.727859 TTCATTCCATTGATTTGATTGATTGTT 57.272 25.926 0.00 0.00 0.00 2.83
763 834 3.132629 GCTTGAGCACATGACTGATTG 57.867 47.619 0.00 0.00 41.59 2.67
764 835 2.731341 GCTTGAGCACATGACTGATTGC 60.731 50.000 0.00 0.00 41.59 3.56
766 837 6.951336 GCTTGAGCACATGACTGATTGCAG 62.951 50.000 0.00 0.00 43.55 4.41
767 838 2.289819 TGAGCACATGACTGATTGCAGA 60.290 45.455 0.00 0.00 45.17 4.26
790 1123 2.093869 CAGAGGCAAACCCCAATTCATG 60.094 50.000 0.00 0.00 36.11 3.07
791 1124 0.614812 AGGCAAACCCCAATTCATGC 59.385 50.000 0.00 0.00 36.11 4.06
792 1125 0.392863 GGCAAACCCCAATTCATGCC 60.393 55.000 0.00 0.00 45.54 4.40
793 1126 0.614812 GCAAACCCCAATTCATGCCT 59.385 50.000 0.00 0.00 0.00 4.75
794 1127 1.003464 GCAAACCCCAATTCATGCCTT 59.997 47.619 0.00 0.00 0.00 4.35
795 1128 2.936553 GCAAACCCCAATTCATGCCTTC 60.937 50.000 0.00 0.00 0.00 3.46
796 1129 1.571955 AACCCCAATTCATGCCTTCC 58.428 50.000 0.00 0.00 0.00 3.46
797 1130 0.712380 ACCCCAATTCATGCCTTCCT 59.288 50.000 0.00 0.00 0.00 3.36
800 1133 1.758862 CCCAATTCATGCCTTCCTTCC 59.241 52.381 0.00 0.00 0.00 3.46
802 1135 3.102204 CCAATTCATGCCTTCCTTCCTT 58.898 45.455 0.00 0.00 0.00 3.36
822 1155 2.991580 TCCTTCCTTCCTTCCTTGAGT 58.008 47.619 0.00 0.00 0.00 3.41
831 1164 2.894126 TCCTTCCTTGAGTCAGTCAGTC 59.106 50.000 0.00 0.00 36.21 3.51
832 1165 2.630098 CCTTCCTTGAGTCAGTCAGTCA 59.370 50.000 0.00 0.00 36.21 3.41
833 1166 3.305950 CCTTCCTTGAGTCAGTCAGTCAG 60.306 52.174 0.00 0.00 35.75 3.51
834 1167 2.950781 TCCTTGAGTCAGTCAGTCAGT 58.049 47.619 0.00 0.00 35.75 3.41
854 1187 2.030363 GTCAGTCAGTCAGTCAGTCAGG 60.030 54.545 0.00 0.00 0.00 3.86
915 1261 3.243643 GTCAGTTGCTGCACAAAATCAAC 59.756 43.478 0.00 0.00 40.82 3.18
918 1264 4.983538 CAGTTGCTGCACAAAATCAACATA 59.016 37.500 0.00 0.00 40.82 2.29
919 1265 5.636121 CAGTTGCTGCACAAAATCAACATAT 59.364 36.000 0.00 0.00 40.82 1.78
920 1266 6.146510 CAGTTGCTGCACAAAATCAACATATT 59.853 34.615 0.00 0.00 40.82 1.28
923 1269 6.923012 TGCTGCACAAAATCAACATATTACT 58.077 32.000 0.00 0.00 0.00 2.24
924 1270 7.028962 TGCTGCACAAAATCAACATATTACTC 58.971 34.615 0.00 0.00 0.00 2.59
926 1272 7.219535 GCTGCACAAAATCAACATATTACTCTG 59.780 37.037 0.00 0.00 0.00 3.35
927 1273 8.334263 TGCACAAAATCAACATATTACTCTGA 57.666 30.769 0.00 0.00 0.00 3.27
928 1274 8.791675 TGCACAAAATCAACATATTACTCTGAA 58.208 29.630 0.00 0.00 0.00 3.02
929 1275 9.793252 GCACAAAATCAACATATTACTCTGAAT 57.207 29.630 0.00 0.00 0.00 2.57
939 1285 9.775854 AACATATTACTCTGAATCTGAATCTGG 57.224 33.333 0.61 0.00 0.00 3.86
940 1286 8.932610 ACATATTACTCTGAATCTGAATCTGGT 58.067 33.333 0.61 1.21 0.00 4.00
941 1287 9.421806 CATATTACTCTGAATCTGAATCTGGTC 57.578 37.037 0.61 0.00 0.00 4.02
942 1288 7.673641 ATTACTCTGAATCTGAATCTGGTCT 57.326 36.000 0.61 0.00 0.00 3.85
943 1289 5.341872 ACTCTGAATCTGAATCTGGTCTG 57.658 43.478 0.61 0.00 0.00 3.51
944 1290 5.022122 ACTCTGAATCTGAATCTGGTCTGA 58.978 41.667 0.61 0.00 0.00 3.27
945 1291 5.483231 ACTCTGAATCTGAATCTGGTCTGAA 59.517 40.000 0.61 0.00 0.00 3.02
946 1292 5.975282 TCTGAATCTGAATCTGGTCTGAAG 58.025 41.667 0.61 0.00 0.00 3.02
947 1293 5.718607 TCTGAATCTGAATCTGGTCTGAAGA 59.281 40.000 0.61 0.00 0.00 2.87
948 1294 6.212187 TCTGAATCTGAATCTGGTCTGAAGAA 59.788 38.462 0.61 0.00 0.00 2.52
949 1295 6.772605 TGAATCTGAATCTGGTCTGAAGAAA 58.227 36.000 0.00 0.00 0.00 2.52
950 1296 7.226441 TGAATCTGAATCTGGTCTGAAGAAAA 58.774 34.615 0.00 0.00 0.00 2.29
951 1297 7.886970 TGAATCTGAATCTGGTCTGAAGAAAAT 59.113 33.333 0.00 0.00 0.00 1.82
952 1298 7.627298 ATCTGAATCTGGTCTGAAGAAAATG 57.373 36.000 0.00 0.00 0.00 2.32
953 1299 6.537355 TCTGAATCTGGTCTGAAGAAAATGT 58.463 36.000 0.00 0.00 0.00 2.71
954 1300 6.429078 TCTGAATCTGGTCTGAAGAAAATGTG 59.571 38.462 0.00 0.00 0.00 3.21
955 1301 5.048504 TGAATCTGGTCTGAAGAAAATGTGC 60.049 40.000 0.00 0.00 0.00 4.57
956 1302 4.090761 TCTGGTCTGAAGAAAATGTGCT 57.909 40.909 0.00 0.00 0.00 4.40
957 1303 4.067896 TCTGGTCTGAAGAAAATGTGCTC 58.932 43.478 0.00 0.00 0.00 4.26
958 1304 4.070716 CTGGTCTGAAGAAAATGTGCTCT 58.929 43.478 0.00 0.00 0.00 4.09
959 1305 4.464008 TGGTCTGAAGAAAATGTGCTCTT 58.536 39.130 0.00 0.00 34.58 2.85
960 1306 4.516698 TGGTCTGAAGAAAATGTGCTCTTC 59.483 41.667 5.13 5.13 45.18 2.87
977 1323 6.093771 GTGCTCTTCACTCTGAATGAATGAAT 59.906 38.462 1.66 0.00 39.70 2.57
978 1324 6.093633 TGCTCTTCACTCTGAATGAATGAATG 59.906 38.462 1.66 0.00 39.70 2.67
979 1325 6.315642 GCTCTTCACTCTGAATGAATGAATGA 59.684 38.462 1.66 0.00 39.70 2.57
980 1326 7.148289 GCTCTTCACTCTGAATGAATGAATGAA 60.148 37.037 1.66 0.00 39.70 2.57
981 1327 8.803397 TCTTCACTCTGAATGAATGAATGAAT 57.197 30.769 1.66 0.00 39.70 2.57
982 1328 8.674607 TCTTCACTCTGAATGAATGAATGAATG 58.325 33.333 1.66 0.00 39.70 2.67
983 1329 8.570068 TTCACTCTGAATGAATGAATGAATGA 57.430 30.769 0.00 0.00 36.20 2.57
984 1330 8.570068 TCACTCTGAATGAATGAATGAATGAA 57.430 30.769 0.00 0.00 26.98 2.57
985 1331 9.185680 TCACTCTGAATGAATGAATGAATGAAT 57.814 29.630 0.00 0.00 26.98 2.57
986 1332 9.237846 CACTCTGAATGAATGAATGAATGAATG 57.762 33.333 0.00 0.00 0.00 2.67
987 1333 9.185680 ACTCTGAATGAATGAATGAATGAATGA 57.814 29.630 0.00 0.00 0.00 2.57
1029 1375 0.102481 CCATGGCAGCAAGAGCAATC 59.898 55.000 0.00 0.00 45.49 2.67
1052 1401 0.627451 TTCCCATGCTGGCTCATCTT 59.373 50.000 0.00 0.00 35.79 2.40
1672 2058 4.760047 CCAACGAGGCCAGGACCG 62.760 72.222 5.01 2.51 33.69 4.79
1701 2087 2.287728 CCTCACGCATCATCTCAGAGAG 60.288 54.545 6.24 0.00 0.00 3.20
1740 2126 1.344438 CACAGCGGCTCCATTCCTATA 59.656 52.381 0.00 0.00 0.00 1.31
1742 2128 2.027745 ACAGCGGCTCCATTCCTATATG 60.028 50.000 0.00 0.00 0.00 1.78
1913 2299 1.452108 GAGGCACCCCGGAAATGAG 60.452 63.158 0.73 0.00 35.76 2.90
1929 2315 0.178068 TGAGGGAAACGAGCTATGCC 59.822 55.000 0.00 0.00 0.00 4.40
1938 2324 1.224075 CGAGCTATGCCATTCTGGTG 58.776 55.000 0.00 0.00 40.46 4.17
1950 2336 3.244911 CCATTCTGGTGTTGGTCTTACCT 60.245 47.826 0.00 0.00 33.96 3.08
1956 2342 2.572104 GGTGTTGGTCTTACCTGAGGAT 59.428 50.000 4.99 0.00 39.58 3.24
2055 2441 1.228894 TGCGGTTCTGGAGGAGTCT 60.229 57.895 0.00 0.00 0.00 3.24
2202 2588 1.371558 GCACTCGGTCCTTGGTCTT 59.628 57.895 0.00 0.00 0.00 3.01
2319 2705 3.745332 GATGTCATGCAAACATCGACA 57.255 42.857 22.36 14.19 42.44 4.35
2331 2717 1.001520 ACATCGACAATGGACCGTGAA 59.998 47.619 2.11 0.00 39.90 3.18
2355 2741 0.636647 TATCTCTGGTGAGGAGGCCA 59.363 55.000 5.01 0.00 40.58 5.36
2418 2804 0.465460 GGTGTCTGTGTGGCTCCAAA 60.465 55.000 0.00 0.00 34.34 3.28
2524 2910 3.722147 CACATGGTAGGCACTCTGATAC 58.278 50.000 0.00 0.00 41.75 2.24
2526 2912 3.133003 ACATGGTAGGCACTCTGATACAC 59.867 47.826 0.00 0.00 41.75 2.90
2529 2915 2.101582 GGTAGGCACTCTGATACACCAG 59.898 54.545 0.00 0.00 41.75 4.00
2693 3079 1.703411 TCCAGAAACAGCCTTTTGGG 58.297 50.000 1.87 0.00 40.82 4.12
2822 3208 6.429078 TGTCATATTATTCATGGCTCTTGCTC 59.571 38.462 0.00 0.00 39.59 4.26
2913 3305 6.365970 ACTAGTTGTTGATCCTCATCTGTT 57.634 37.500 0.00 0.00 0.00 3.16
2920 3312 3.849911 TGATCCTCATCTGTTTCGTCAC 58.150 45.455 0.00 0.00 0.00 3.67
2932 3327 6.083630 TCTGTTTCGTCACTTTTTCAGTTTG 58.916 36.000 0.00 0.00 30.92 2.93
2988 3383 7.393234 TCAGGCTAGCATGTAGTTACAATTTTT 59.607 33.333 26.98 0.00 39.99 1.94
3122 3521 6.127842 GGTTCAAACTGGGCGAAATAAGATTA 60.128 38.462 0.00 0.00 0.00 1.75
3123 3522 7.309920 GTTCAAACTGGGCGAAATAAGATTAA 58.690 34.615 0.00 0.00 0.00 1.40
3192 3594 5.001237 TCATTTATGCTGCTTGTTCATGG 57.999 39.130 0.00 0.00 0.00 3.66
3253 3658 2.296190 AGAATTCCGGTGCTTGTTTTCC 59.704 45.455 0.00 0.00 0.00 3.13
3254 3659 1.698506 ATTCCGGTGCTTGTTTTCCA 58.301 45.000 0.00 0.00 0.00 3.53
3266 3671 7.755373 GGTGCTTGTTTTCCATAACTATCTTTC 59.245 37.037 0.00 0.00 0.00 2.62
3282 3687 7.337167 ACTATCTTTCTCTTTGTGCTCATCAT 58.663 34.615 0.00 0.00 0.00 2.45
3283 3688 6.680874 ATCTTTCTCTTTGTGCTCATCATC 57.319 37.500 0.00 0.00 0.00 2.92
3284 3689 5.554070 TCTTTCTCTTTGTGCTCATCATCA 58.446 37.500 0.00 0.00 0.00 3.07
3298 3703 5.032327 TCATCATCAGTTCATTCCTCAGG 57.968 43.478 0.00 0.00 0.00 3.86
3300 3705 4.750021 TCATCAGTTCATTCCTCAGGAG 57.250 45.455 0.00 0.00 31.21 3.69
3302 3707 4.779489 TCATCAGTTCATTCCTCAGGAGAA 59.221 41.667 0.00 0.00 31.21 2.87
3305 3710 6.874278 TCAGTTCATTCCTCAGGAGAAATA 57.126 37.500 0.00 0.00 31.21 1.40
3310 3715 8.214364 AGTTCATTCCTCAGGAGAAATATTACC 58.786 37.037 0.00 0.00 31.21 2.85
3316 3721 2.800544 CAGGAGAAATATTACCGTGGCG 59.199 50.000 0.00 0.00 0.00 5.69
3317 3722 2.433239 AGGAGAAATATTACCGTGGCGT 59.567 45.455 0.00 0.00 0.00 5.68
3318 3723 2.542595 GGAGAAATATTACCGTGGCGTG 59.457 50.000 0.00 0.00 0.00 5.34
3319 3724 2.542595 GAGAAATATTACCGTGGCGTGG 59.457 50.000 0.00 0.00 0.00 4.94
3320 3725 1.003223 GAAATATTACCGTGGCGTGGC 60.003 52.381 0.00 0.00 0.00 5.01
3640 4061 1.715993 GAGTCTTTTCGGTCAGCTCC 58.284 55.000 0.00 0.00 0.00 4.70
3793 4214 3.036429 GCCTCTGATCGTGGCCCTT 62.036 63.158 15.32 0.00 44.59 3.95
3795 4216 1.599047 CTCTGATCGTGGCCCTTGT 59.401 57.895 0.00 0.00 0.00 3.16
4042 4470 5.630061 AGAAGCATTTGTGCAAAAACAAAC 58.370 33.333 3.61 0.00 34.99 2.93
4047 4477 6.698766 AGCATTTGTGCAAAAACAAACAAAAA 59.301 26.923 3.61 0.00 34.99 1.94
4095 4525 2.645297 GGAAGGAAGGAAGGAAGGAAGT 59.355 50.000 0.00 0.00 0.00 3.01
4130 4586 5.481473 TGGGGAATTTTGGAGAGATGAAAAG 59.519 40.000 0.00 0.00 0.00 2.27
4137 4594 3.454858 TGGAGAGATGAAAAGGCTACCT 58.545 45.455 0.00 0.00 33.87 3.08
4183 4640 9.736023 GGCTATTCATTTGTAAAACCTCTTATG 57.264 33.333 0.00 0.00 0.00 1.90
4184 4641 9.237846 GCTATTCATTTGTAAAACCTCTTATGC 57.762 33.333 0.00 0.00 0.00 3.14
4208 4669 9.812347 TGCTGGATTATTAATGATTTATGAGGT 57.188 29.630 0.00 0.00 0.00 3.85
4239 4700 3.109847 GGCAACCAGGTCAAGTCAA 57.890 52.632 0.00 0.00 0.00 3.18
4244 4705 3.480470 CAACCAGGTCAAGTCAAGTCAT 58.520 45.455 0.00 0.00 0.00 3.06
4246 4707 2.705658 ACCAGGTCAAGTCAAGTCATGA 59.294 45.455 0.00 0.00 35.05 3.07
4247 4708 3.136443 ACCAGGTCAAGTCAAGTCATGAA 59.864 43.478 0.00 0.00 40.50 2.57
4248 4709 3.750130 CCAGGTCAAGTCAAGTCATGAAG 59.250 47.826 0.00 0.00 40.50 3.02
4250 4711 5.511373 CCAGGTCAAGTCAAGTCATGAAGTA 60.511 44.000 0.00 0.00 40.50 2.24
4251 4712 5.636965 CAGGTCAAGTCAAGTCATGAAGTAG 59.363 44.000 0.00 0.00 40.50 2.57
4252 4713 4.390297 GGTCAAGTCAAGTCATGAAGTAGC 59.610 45.833 0.00 0.00 40.50 3.58
4253 4714 5.233988 GTCAAGTCAAGTCATGAAGTAGCT 58.766 41.667 0.00 0.00 40.50 3.32
4254 4715 6.390721 GTCAAGTCAAGTCATGAAGTAGCTA 58.609 40.000 0.00 0.00 40.50 3.32
4255 4716 6.529829 GTCAAGTCAAGTCATGAAGTAGCTAG 59.470 42.308 0.00 0.00 40.50 3.42
4257 4744 6.202516 AGTCAAGTCATGAAGTAGCTAGAC 57.797 41.667 0.00 0.00 40.50 2.59
4259 4746 6.209589 AGTCAAGTCATGAAGTAGCTAGACAA 59.790 38.462 0.00 0.00 40.50 3.18
4261 4748 6.434340 TCAAGTCATGAAGTAGCTAGACAAGA 59.566 38.462 0.00 5.53 34.30 3.02
4263 4750 6.804677 AGTCATGAAGTAGCTAGACAAGATG 58.195 40.000 0.00 2.49 0.00 2.90
4269 4756 7.786030 TGAAGTAGCTAGACAAGATGCTAATT 58.214 34.615 6.30 6.30 44.98 1.40
4274 4761 5.587844 AGCTAGACAAGATGCTAATTTGGTG 59.412 40.000 0.00 0.00 33.64 4.17
4283 4770 1.818674 GCTAATTTGGTGTGGTCCAGG 59.181 52.381 0.00 0.00 38.80 4.45
4286 4773 0.405585 ATTTGGTGTGGTCCAGGGAG 59.594 55.000 0.00 0.00 38.80 4.30
4287 4774 1.715019 TTTGGTGTGGTCCAGGGAGG 61.715 60.000 0.00 0.00 38.80 4.30
4288 4775 3.330720 GGTGTGGTCCAGGGAGGG 61.331 72.222 0.00 0.00 38.24 4.30
4291 4778 4.677151 GTGGTCCAGGGAGGGGGT 62.677 72.222 0.00 0.00 38.24 4.95
4296 4783 2.160171 TCCAGGGAGGGGGTGTTTG 61.160 63.158 0.00 0.00 38.24 2.93
4297 4784 2.160171 CCAGGGAGGGGGTGTTTGA 61.160 63.158 0.00 0.00 0.00 2.69
4298 4785 1.509548 CCAGGGAGGGGGTGTTTGAT 61.510 60.000 0.00 0.00 0.00 2.57
4299 4786 0.409484 CAGGGAGGGGGTGTTTGATT 59.591 55.000 0.00 0.00 0.00 2.57
4301 4788 1.203174 AGGGAGGGGGTGTTTGATTTG 60.203 52.381 0.00 0.00 0.00 2.32
4302 4789 1.266178 GGAGGGGGTGTTTGATTTGG 58.734 55.000 0.00 0.00 0.00 3.28
4303 4790 1.482365 GGAGGGGGTGTTTGATTTGGT 60.482 52.381 0.00 0.00 0.00 3.67
4304 4791 2.325484 GAGGGGGTGTTTGATTTGGTT 58.675 47.619 0.00 0.00 0.00 3.67
4305 4792 2.703536 GAGGGGGTGTTTGATTTGGTTT 59.296 45.455 0.00 0.00 0.00 3.27
4306 4793 3.898741 GAGGGGGTGTTTGATTTGGTTTA 59.101 43.478 0.00 0.00 0.00 2.01
4347 4834 5.522456 TGTGAATTCAGTGAATGCAGAAAC 58.478 37.500 24.40 14.25 38.15 2.78
4372 4859 8.251721 ACTAGTGTTGATACTGACTTGTTATCC 58.748 37.037 0.00 0.00 32.19 2.59
4374 4861 7.324178 AGTGTTGATACTGACTTGTTATCCTC 58.676 38.462 0.00 0.00 0.00 3.71
4377 4864 8.375506 TGTTGATACTGACTTGTTATCCTCTTT 58.624 33.333 0.00 0.00 0.00 2.52
4386 4873 9.621629 TGACTTGTTATCCTCTTTAAAGAAACA 57.378 29.630 21.21 21.21 32.94 2.83
4425 4916 3.827722 AGGCAGACTGACTAGGAGTATC 58.172 50.000 9.79 0.00 30.85 2.24
4438 4929 3.230134 AGGAGTATCTGATGCTGACCTC 58.770 50.000 13.12 0.00 33.73 3.85
4442 4933 5.396213 GGAGTATCTGATGCTGACCTCTTTT 60.396 44.000 13.12 0.00 33.73 2.27
4443 4934 6.059787 AGTATCTGATGCTGACCTCTTTTT 57.940 37.500 7.49 0.00 0.00 1.94
4516 5011 7.990314 ACCTAGTAGTAGTAGTAGTACAAAGGC 59.010 40.741 26.03 5.97 40.34 4.35
4518 5013 9.388506 CTAGTAGTAGTAGTAGTACAAAGGCAA 57.611 37.037 20.04 1.83 37.48 4.52
4519 5014 8.049655 AGTAGTAGTAGTAGTACAAAGGCAAC 57.950 38.462 20.04 4.33 37.48 4.17
4576 5071 5.419155 TGAATGAGTGTTAGGAGGTGTAGAG 59.581 44.000 0.00 0.00 0.00 2.43
4599 5094 0.674581 TTGCAGCTGAGGTTCCATCG 60.675 55.000 20.43 0.00 0.00 3.84
4641 5137 4.156556 GGCAACTTAGCTGATTGATTGTGA 59.843 41.667 0.00 0.00 34.17 3.58
4690 5186 7.759489 TTTTTATGCAAGGAGACACTACAAT 57.241 32.000 0.00 0.00 0.00 2.71
4691 5187 6.741992 TTTATGCAAGGAGACACTACAATG 57.258 37.500 0.00 0.00 0.00 2.82
4692 5188 3.769739 TGCAAGGAGACACTACAATGT 57.230 42.857 0.00 0.00 34.78 2.71
4693 5189 3.402110 TGCAAGGAGACACTACAATGTG 58.598 45.455 0.00 0.00 43.07 3.21
4694 5190 2.160417 GCAAGGAGACACTACAATGTGC 59.840 50.000 0.00 0.00 41.30 4.57
4695 5191 3.402110 CAAGGAGACACTACAATGTGCA 58.598 45.455 0.00 0.00 41.30 4.57
4696 5192 3.988976 AGGAGACACTACAATGTGCAT 57.011 42.857 0.00 0.00 41.30 3.96
4697 5193 3.603532 AGGAGACACTACAATGTGCATG 58.396 45.455 0.00 0.00 41.30 4.06
4698 5194 2.679837 GGAGACACTACAATGTGCATGG 59.320 50.000 0.00 0.00 41.30 3.66
4699 5195 3.599343 GAGACACTACAATGTGCATGGA 58.401 45.455 0.00 0.00 41.30 3.41
4700 5196 4.002982 GAGACACTACAATGTGCATGGAA 58.997 43.478 0.00 0.00 41.30 3.53
4701 5197 4.592942 AGACACTACAATGTGCATGGAAT 58.407 39.130 0.00 0.00 41.30 3.01
4702 5198 5.012239 AGACACTACAATGTGCATGGAATT 58.988 37.500 0.00 0.00 41.30 2.17
4703 5199 5.477984 AGACACTACAATGTGCATGGAATTT 59.522 36.000 0.00 0.00 41.30 1.82
4704 5200 5.713025 ACACTACAATGTGCATGGAATTTC 58.287 37.500 0.00 0.00 41.30 2.17
4705 5201 5.477984 ACACTACAATGTGCATGGAATTTCT 59.522 36.000 0.00 0.00 41.30 2.52
4706 5202 6.032094 CACTACAATGTGCATGGAATTTCTC 58.968 40.000 0.00 0.00 0.00 2.87
4707 5203 5.948162 ACTACAATGTGCATGGAATTTCTCT 59.052 36.000 0.00 0.00 0.00 3.10
4708 5204 5.320549 ACAATGTGCATGGAATTTCTCTC 57.679 39.130 0.00 0.00 0.00 3.20
4709 5205 5.014858 ACAATGTGCATGGAATTTCTCTCT 58.985 37.500 0.00 0.00 0.00 3.10
4710 5206 5.125097 ACAATGTGCATGGAATTTCTCTCTC 59.875 40.000 0.00 0.00 0.00 3.20
4711 5207 4.290711 TGTGCATGGAATTTCTCTCTCA 57.709 40.909 0.00 0.00 0.00 3.27
4712 5208 4.259356 TGTGCATGGAATTTCTCTCTCAG 58.741 43.478 0.00 0.00 0.00 3.35
4713 5209 4.260170 GTGCATGGAATTTCTCTCTCAGT 58.740 43.478 0.00 0.00 0.00 3.41
4714 5210 4.699257 GTGCATGGAATTTCTCTCTCAGTT 59.301 41.667 0.00 0.00 0.00 3.16
4715 5211 4.940046 TGCATGGAATTTCTCTCTCAGTTC 59.060 41.667 0.00 0.00 0.00 3.01
4716 5212 4.335037 GCATGGAATTTCTCTCTCAGTTCC 59.665 45.833 0.00 0.00 36.52 3.62
4717 5213 4.559862 TGGAATTTCTCTCTCAGTTCCC 57.440 45.455 0.00 0.00 35.41 3.97
4718 5214 3.909995 TGGAATTTCTCTCTCAGTTCCCA 59.090 43.478 0.00 0.00 35.41 4.37
4719 5215 4.257731 GGAATTTCTCTCTCAGTTCCCAC 58.742 47.826 0.00 0.00 31.23 4.61
4720 5216 4.019771 GGAATTTCTCTCTCAGTTCCCACT 60.020 45.833 0.00 0.00 31.23 4.00
4721 5217 5.513962 GGAATTTCTCTCTCAGTTCCCACTT 60.514 44.000 0.00 0.00 31.23 3.16
4722 5218 5.574970 ATTTCTCTCTCAGTTCCCACTTT 57.425 39.130 0.00 0.00 0.00 2.66
4723 5219 4.342862 TTCTCTCTCAGTTCCCACTTTG 57.657 45.455 0.00 0.00 0.00 2.77
4724 5220 2.634940 TCTCTCTCAGTTCCCACTTTGG 59.365 50.000 0.00 0.00 37.25 3.28
4725 5221 2.370189 CTCTCTCAGTTCCCACTTTGGT 59.630 50.000 0.00 0.00 35.17 3.67
4726 5222 3.578716 CTCTCTCAGTTCCCACTTTGGTA 59.421 47.826 0.00 0.00 35.17 3.25
4727 5223 4.168101 TCTCTCAGTTCCCACTTTGGTAT 58.832 43.478 0.00 0.00 35.17 2.73
4728 5224 4.020218 TCTCTCAGTTCCCACTTTGGTATG 60.020 45.833 0.00 0.00 35.17 2.39
4729 5225 3.009033 TCTCAGTTCCCACTTTGGTATGG 59.991 47.826 0.00 0.00 35.17 2.74
4730 5226 2.714250 TCAGTTCCCACTTTGGTATGGT 59.286 45.455 0.00 0.00 35.17 3.55
4731 5227 3.911260 TCAGTTCCCACTTTGGTATGGTA 59.089 43.478 0.00 0.00 35.17 3.25
4732 5228 4.538490 TCAGTTCCCACTTTGGTATGGTAT 59.462 41.667 0.00 0.00 35.17 2.73
4733 5229 5.014755 TCAGTTCCCACTTTGGTATGGTATT 59.985 40.000 0.00 0.00 35.17 1.89
4734 5230 5.125417 CAGTTCCCACTTTGGTATGGTATTG 59.875 44.000 0.00 0.00 35.17 1.90
4735 5231 4.938575 TCCCACTTTGGTATGGTATTGT 57.061 40.909 0.00 0.00 35.17 2.71
4736 5232 5.263872 TCCCACTTTGGTATGGTATTGTT 57.736 39.130 0.00 0.00 35.17 2.83
4737 5233 5.013547 TCCCACTTTGGTATGGTATTGTTG 58.986 41.667 0.00 0.00 35.17 3.33
4738 5234 5.013547 CCCACTTTGGTATGGTATTGTTGA 58.986 41.667 0.00 0.00 35.17 3.18
4739 5235 5.105917 CCCACTTTGGTATGGTATTGTTGAC 60.106 44.000 0.00 0.00 35.17 3.18
4740 5236 5.475220 CCACTTTGGTATGGTATTGTTGACA 59.525 40.000 0.00 0.00 31.35 3.58
4741 5237 6.015856 CCACTTTGGTATGGTATTGTTGACAA 60.016 38.462 0.00 0.00 34.83 3.18
4742 5238 7.309744 CCACTTTGGTATGGTATTGTTGACAAT 60.310 37.037 13.32 13.32 40.11 2.71
4743 5239 8.087750 CACTTTGGTATGGTATTGTTGACAATT 58.912 33.333 13.94 0.19 43.48 2.32
4744 5240 8.303876 ACTTTGGTATGGTATTGTTGACAATTC 58.696 33.333 13.94 9.31 43.48 2.17
4745 5241 8.415950 TTTGGTATGGTATTGTTGACAATTCT 57.584 30.769 13.94 0.00 43.48 2.40
4746 5242 7.389803 TGGTATGGTATTGTTGACAATTCTG 57.610 36.000 13.94 0.00 43.48 3.02
4747 5243 7.171653 TGGTATGGTATTGTTGACAATTCTGA 58.828 34.615 13.94 2.56 43.48 3.27
4748 5244 7.120579 TGGTATGGTATTGTTGACAATTCTGAC 59.879 37.037 13.94 6.77 43.48 3.51
4749 5245 5.957842 TGGTATTGTTGACAATTCTGACC 57.042 39.130 13.94 14.57 43.48 4.02
4750 5246 5.630121 TGGTATTGTTGACAATTCTGACCT 58.370 37.500 19.48 0.04 43.48 3.85
4751 5247 5.473162 TGGTATTGTTGACAATTCTGACCTG 59.527 40.000 19.48 0.00 43.48 4.00
4752 5248 5.106157 GGTATTGTTGACAATTCTGACCTGG 60.106 44.000 13.94 0.00 43.48 4.45
4753 5249 3.576078 TGTTGACAATTCTGACCTGGT 57.424 42.857 0.00 0.00 0.00 4.00
4754 5250 3.897239 TGTTGACAATTCTGACCTGGTT 58.103 40.909 0.00 0.00 0.00 3.67
4755 5251 3.631686 TGTTGACAATTCTGACCTGGTTG 59.368 43.478 0.00 0.00 0.00 3.77
4756 5252 2.229792 TGACAATTCTGACCTGGTTGC 58.770 47.619 0.00 0.00 0.00 4.17
4757 5253 1.541588 GACAATTCTGACCTGGTTGCC 59.458 52.381 0.00 0.00 0.00 4.52
4758 5254 1.133513 ACAATTCTGACCTGGTTGCCA 60.134 47.619 0.00 0.00 0.00 4.92
4759 5255 1.270550 CAATTCTGACCTGGTTGCCAC 59.729 52.381 0.00 0.00 0.00 5.01
4760 5256 0.606401 ATTCTGACCTGGTTGCCACG 60.606 55.000 0.00 0.00 0.00 4.94
4761 5257 1.691195 TTCTGACCTGGTTGCCACGA 61.691 55.000 0.00 0.00 0.00 4.35
4762 5258 1.227823 CTGACCTGGTTGCCACGAA 60.228 57.895 0.00 0.00 0.00 3.85
4763 5259 0.606401 CTGACCTGGTTGCCACGAAT 60.606 55.000 0.00 0.00 0.00 3.34
4764 5260 0.888736 TGACCTGGTTGCCACGAATG 60.889 55.000 0.00 0.00 0.00 2.67
4765 5261 0.605319 GACCTGGTTGCCACGAATGA 60.605 55.000 0.00 0.00 0.00 2.57
4766 5262 0.179004 ACCTGGTTGCCACGAATGAA 60.179 50.000 0.00 0.00 0.00 2.57
4767 5263 1.176527 CCTGGTTGCCACGAATGAAT 58.823 50.000 0.00 0.00 0.00 2.57
4768 5264 1.135315 CCTGGTTGCCACGAATGAATG 60.135 52.381 0.00 0.00 0.00 2.67
4769 5265 1.811965 CTGGTTGCCACGAATGAATGA 59.188 47.619 0.00 0.00 0.00 2.57
4770 5266 2.228582 CTGGTTGCCACGAATGAATGAA 59.771 45.455 0.00 0.00 0.00 2.57
4771 5267 2.824936 TGGTTGCCACGAATGAATGAAT 59.175 40.909 0.00 0.00 0.00 2.57
4772 5268 3.181397 GGTTGCCACGAATGAATGAATG 58.819 45.455 0.00 0.00 0.00 2.67
4773 5269 3.119531 GGTTGCCACGAATGAATGAATGA 60.120 43.478 0.00 0.00 0.00 2.57
4774 5270 4.484236 GTTGCCACGAATGAATGAATGAA 58.516 39.130 0.00 0.00 0.00 2.57
4775 5271 4.987408 TGCCACGAATGAATGAATGAAT 57.013 36.364 0.00 0.00 0.00 2.57
4776 5272 5.327616 TGCCACGAATGAATGAATGAATT 57.672 34.783 0.00 0.00 0.00 2.17
4777 5273 5.342433 TGCCACGAATGAATGAATGAATTC 58.658 37.500 0.00 0.00 37.13 2.17
4778 5274 5.125900 TGCCACGAATGAATGAATGAATTCT 59.874 36.000 7.05 0.00 37.44 2.40
4779 5275 6.038356 GCCACGAATGAATGAATGAATTCTT 58.962 36.000 7.05 0.00 37.44 2.52
4780 5276 6.197842 GCCACGAATGAATGAATGAATTCTTC 59.802 38.462 7.05 8.52 37.44 2.87
4781 5277 6.694411 CCACGAATGAATGAATGAATTCTTCC 59.306 38.462 7.05 0.00 37.44 3.46
4782 5278 7.252708 CACGAATGAATGAATGAATTCTTCCA 58.747 34.615 7.05 0.00 37.44 3.53
4783 5279 7.919091 CACGAATGAATGAATGAATTCTTCCAT 59.081 33.333 7.05 0.00 37.44 3.41
4784 5280 7.919091 ACGAATGAATGAATGAATTCTTCCATG 59.081 33.333 7.05 0.00 37.44 3.66
4785 5281 7.096189 CGAATGAATGAATGAATTCTTCCATGC 60.096 37.037 7.05 0.00 37.44 4.06
4786 5282 6.785337 TGAATGAATGAATTCTTCCATGCT 57.215 33.333 7.05 0.00 37.44 3.79
4787 5283 7.885009 TGAATGAATGAATTCTTCCATGCTA 57.115 32.000 7.05 0.00 37.44 3.49
4788 5284 7.709947 TGAATGAATGAATTCTTCCATGCTAC 58.290 34.615 7.05 0.00 37.44 3.58
4789 5285 7.339976 TGAATGAATGAATTCTTCCATGCTACA 59.660 33.333 7.05 0.00 37.44 2.74
4790 5286 7.649533 ATGAATGAATTCTTCCATGCTACAA 57.350 32.000 7.05 0.00 37.67 2.41
4791 5287 7.649533 TGAATGAATTCTTCCATGCTACAAT 57.350 32.000 7.05 0.00 37.67 2.71
4792 5288 7.485810 TGAATGAATTCTTCCATGCTACAATG 58.514 34.615 7.05 0.00 37.67 2.82
4793 5289 5.252969 TGAATTCTTCCATGCTACAATGC 57.747 39.130 7.05 0.00 0.00 3.56
4794 5290 4.951715 TGAATTCTTCCATGCTACAATGCT 59.048 37.500 7.05 0.00 0.00 3.79
4795 5291 5.419788 TGAATTCTTCCATGCTACAATGCTT 59.580 36.000 7.05 0.00 0.00 3.91
4796 5292 5.927281 ATTCTTCCATGCTACAATGCTTT 57.073 34.783 0.00 0.00 0.00 3.51
4797 5293 5.726980 TTCTTCCATGCTACAATGCTTTT 57.273 34.783 0.00 0.00 0.00 2.27
4798 5294 5.726980 TCTTCCATGCTACAATGCTTTTT 57.273 34.783 0.00 0.00 0.00 1.94
4832 5328 6.901081 ATAAACAAGACAAGGAAAGGAAGG 57.099 37.500 0.00 0.00 0.00 3.46
4833 5329 4.519906 AACAAGACAAGGAAAGGAAGGA 57.480 40.909 0.00 0.00 0.00 3.36
4834 5330 4.092116 ACAAGACAAGGAAAGGAAGGAG 57.908 45.455 0.00 0.00 0.00 3.69
4835 5331 3.181439 ACAAGACAAGGAAAGGAAGGAGG 60.181 47.826 0.00 0.00 0.00 4.30
4836 5332 2.991580 AGACAAGGAAAGGAAGGAGGA 58.008 47.619 0.00 0.00 0.00 3.71
4837 5333 3.327439 AGACAAGGAAAGGAAGGAGGAA 58.673 45.455 0.00 0.00 0.00 3.36
4838 5334 3.919554 AGACAAGGAAAGGAAGGAGGAAT 59.080 43.478 0.00 0.00 0.00 3.01
4839 5335 4.355287 AGACAAGGAAAGGAAGGAGGAATT 59.645 41.667 0.00 0.00 0.00 2.17
4840 5336 5.079998 ACAAGGAAAGGAAGGAGGAATTT 57.920 39.130 0.00 0.00 0.00 1.82
4841 5337 4.835056 ACAAGGAAAGGAAGGAGGAATTTG 59.165 41.667 0.00 0.00 0.00 2.32
4842 5338 4.749048 AGGAAAGGAAGGAGGAATTTGT 57.251 40.909 0.00 0.00 0.00 2.83
4843 5339 5.079998 AGGAAAGGAAGGAGGAATTTGTT 57.920 39.130 0.00 0.00 0.00 2.83
4844 5340 4.835056 AGGAAAGGAAGGAGGAATTTGTTG 59.165 41.667 0.00 0.00 0.00 3.33
4845 5341 4.832823 GGAAAGGAAGGAGGAATTTGTTGA 59.167 41.667 0.00 0.00 0.00 3.18
4846 5342 5.047731 GGAAAGGAAGGAGGAATTTGTTGAG 60.048 44.000 0.00 0.00 0.00 3.02
4847 5343 3.425659 AGGAAGGAGGAATTTGTTGAGC 58.574 45.455 0.00 0.00 0.00 4.26
4848 5344 2.493675 GGAAGGAGGAATTTGTTGAGCC 59.506 50.000 0.00 0.00 0.00 4.70
4849 5345 3.425659 GAAGGAGGAATTTGTTGAGCCT 58.574 45.455 0.00 0.00 0.00 4.58
4850 5346 3.078891 AGGAGGAATTTGTTGAGCCTC 57.921 47.619 0.00 0.00 43.40 4.70
4852 5348 2.095461 GAGGAATTTGTTGAGCCTCCC 58.905 52.381 0.00 0.00 39.33 4.30
4853 5349 1.186200 GGAATTTGTTGAGCCTCCCC 58.814 55.000 0.00 0.00 0.00 4.81
4854 5350 1.272704 GGAATTTGTTGAGCCTCCCCT 60.273 52.381 0.00 0.00 0.00 4.79
4855 5351 2.095461 GAATTTGTTGAGCCTCCCCTC 58.905 52.381 0.00 0.00 0.00 4.30
4856 5352 0.332972 ATTTGTTGAGCCTCCCCTCC 59.667 55.000 0.00 0.00 0.00 4.30
4857 5353 1.789576 TTTGTTGAGCCTCCCCTCCC 61.790 60.000 0.00 0.00 0.00 4.30
4858 5354 3.412408 GTTGAGCCTCCCCTCCCC 61.412 72.222 0.00 0.00 0.00 4.81
4859 5355 3.626596 TTGAGCCTCCCCTCCCCT 61.627 66.667 0.00 0.00 0.00 4.79
4860 5356 3.642741 TTGAGCCTCCCCTCCCCTC 62.643 68.421 0.00 0.00 0.00 4.30
4861 5357 4.890306 GAGCCTCCCCTCCCCTCC 62.890 77.778 0.00 0.00 0.00 4.30
4864 5360 4.179599 CCTCCCCTCCCCTCCCTC 62.180 77.778 0.00 0.00 0.00 4.30
4865 5361 3.368501 CTCCCCTCCCCTCCCTCA 61.369 72.222 0.00 0.00 0.00 3.86
4866 5362 2.879490 TCCCCTCCCCTCCCTCAA 60.879 66.667 0.00 0.00 0.00 3.02
4867 5363 2.367512 CCCCTCCCCTCCCTCAAG 60.368 72.222 0.00 0.00 0.00 3.02
4868 5364 3.093172 CCCTCCCCTCCCTCAAGC 61.093 72.222 0.00 0.00 0.00 4.01
4869 5365 2.285668 CCTCCCCTCCCTCAAGCA 60.286 66.667 0.00 0.00 0.00 3.91
4870 5366 1.695597 CCTCCCCTCCCTCAAGCAT 60.696 63.158 0.00 0.00 0.00 3.79
4871 5367 1.284841 CCTCCCCTCCCTCAAGCATT 61.285 60.000 0.00 0.00 0.00 3.56
4872 5368 0.182299 CTCCCCTCCCTCAAGCATTC 59.818 60.000 0.00 0.00 0.00 2.67
4873 5369 1.228510 CCCCTCCCTCAAGCATTCC 59.771 63.158 0.00 0.00 0.00 3.01
4874 5370 1.574526 CCCCTCCCTCAAGCATTCCA 61.575 60.000 0.00 0.00 0.00 3.53
4875 5371 0.554792 CCCTCCCTCAAGCATTCCAT 59.445 55.000 0.00 0.00 0.00 3.41
4876 5372 1.063417 CCCTCCCTCAAGCATTCCATT 60.063 52.381 0.00 0.00 0.00 3.16
4877 5373 2.305009 CCTCCCTCAAGCATTCCATTC 58.695 52.381 0.00 0.00 0.00 2.67
4878 5374 2.357465 CCTCCCTCAAGCATTCCATTCA 60.357 50.000 0.00 0.00 0.00 2.57
4879 5375 2.686915 CTCCCTCAAGCATTCCATTCAC 59.313 50.000 0.00 0.00 0.00 3.18
4880 5376 1.753073 CCCTCAAGCATTCCATTCACC 59.247 52.381 0.00 0.00 0.00 4.02
4881 5377 2.622452 CCCTCAAGCATTCCATTCACCT 60.622 50.000 0.00 0.00 0.00 4.00
4882 5378 3.094572 CCTCAAGCATTCCATTCACCTT 58.905 45.455 0.00 0.00 0.00 3.50
4883 5379 3.129988 CCTCAAGCATTCCATTCACCTTC 59.870 47.826 0.00 0.00 0.00 3.46
4884 5380 4.015084 CTCAAGCATTCCATTCACCTTCT 58.985 43.478 0.00 0.00 0.00 2.85
4885 5381 4.410099 TCAAGCATTCCATTCACCTTCTT 58.590 39.130 0.00 0.00 0.00 2.52
4886 5382 4.219070 TCAAGCATTCCATTCACCTTCTTG 59.781 41.667 0.00 0.00 0.00 3.02
4887 5383 3.094572 AGCATTCCATTCACCTTCTTGG 58.905 45.455 0.00 0.00 42.93 3.61
4902 5398 6.540438 CCTTCTTGGTAGTGGTAGTGATAA 57.460 41.667 0.00 0.00 0.00 1.75
4903 5399 7.125792 CCTTCTTGGTAGTGGTAGTGATAAT 57.874 40.000 0.00 0.00 0.00 1.28
4904 5400 8.246430 CCTTCTTGGTAGTGGTAGTGATAATA 57.754 38.462 0.00 0.00 0.00 0.98
4905 5401 8.701895 CCTTCTTGGTAGTGGTAGTGATAATAA 58.298 37.037 0.00 0.00 0.00 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 0.840722 GGTGTGGAGGAAGGGAGGAA 60.841 60.000 0.00 0.00 0.00 3.36
22 23 1.229529 GGTGTGGAGGAAGGGAGGA 60.230 63.158 0.00 0.00 0.00 3.71
24 25 1.268283 GGAGGTGTGGAGGAAGGGAG 61.268 65.000 0.00 0.00 0.00 4.30
25 26 1.229529 GGAGGTGTGGAGGAAGGGA 60.230 63.158 0.00 0.00 0.00 4.20
27 28 1.538876 TGGGAGGTGTGGAGGAAGG 60.539 63.158 0.00 0.00 0.00 3.46
28 29 0.838122 AGTGGGAGGTGTGGAGGAAG 60.838 60.000 0.00 0.00 0.00 3.46
29 30 0.836400 GAGTGGGAGGTGTGGAGGAA 60.836 60.000 0.00 0.00 0.00 3.36
36 37 1.915769 GAGGCAGAGTGGGAGGTGT 60.916 63.158 0.00 0.00 0.00 4.16
42 43 4.106925 GCAGGGAGGCAGAGTGGG 62.107 72.222 0.00 0.00 0.00 4.61
43 44 2.533974 GAAGCAGGGAGGCAGAGTGG 62.534 65.000 0.00 0.00 35.83 4.00
115 130 3.807839 TGCGGTGGGGGATGGATG 61.808 66.667 0.00 0.00 0.00 3.51
116 131 3.809013 GTGCGGTGGGGGATGGAT 61.809 66.667 0.00 0.00 0.00 3.41
131 146 2.351276 CTTCCCTTCCCACCGGTG 59.649 66.667 28.26 28.26 0.00 4.94
146 161 0.851332 CCCTTCCCTTCCCTTCCCTT 60.851 60.000 0.00 0.00 0.00 3.95
151 166 1.230314 CCCTCCCTTCCCTTCCCTT 60.230 63.158 0.00 0.00 0.00 3.95
152 167 2.461637 CCCTCCCTTCCCTTCCCT 59.538 66.667 0.00 0.00 0.00 4.20
153 168 2.696504 CCCCTCCCTTCCCTTCCC 60.697 72.222 0.00 0.00 0.00 3.97
154 169 0.849540 TTTCCCCTCCCTTCCCTTCC 60.850 60.000 0.00 0.00 0.00 3.46
155 170 1.215673 GATTTCCCCTCCCTTCCCTTC 59.784 57.143 0.00 0.00 0.00 3.46
156 171 1.309876 GATTTCCCCTCCCTTCCCTT 58.690 55.000 0.00 0.00 0.00 3.95
157 172 0.988678 CGATTTCCCCTCCCTTCCCT 60.989 60.000 0.00 0.00 0.00 4.20
158 173 1.532238 CGATTTCCCCTCCCTTCCC 59.468 63.158 0.00 0.00 0.00 3.97
159 174 1.532238 CCGATTTCCCCTCCCTTCC 59.468 63.158 0.00 0.00 0.00 3.46
160 175 1.152943 GCCGATTTCCCCTCCCTTC 60.153 63.158 0.00 0.00 0.00 3.46
161 176 3.007542 GCCGATTTCCCCTCCCTT 58.992 61.111 0.00 0.00 0.00 3.95
162 177 3.480133 CGCCGATTTCCCCTCCCT 61.480 66.667 0.00 0.00 0.00 4.20
163 178 4.564110 CCGCCGATTTCCCCTCCC 62.564 72.222 0.00 0.00 0.00 4.30
164 179 4.564110 CCCGCCGATTTCCCCTCC 62.564 72.222 0.00 0.00 0.00 4.30
165 180 3.462199 CTCCCGCCGATTTCCCCTC 62.462 68.421 0.00 0.00 0.00 4.30
166 181 3.480133 CTCCCGCCGATTTCCCCT 61.480 66.667 0.00 0.00 0.00 4.79
167 182 4.564110 CCTCCCGCCGATTTCCCC 62.564 72.222 0.00 0.00 0.00 4.81
168 183 3.462199 CTCCTCCCGCCGATTTCCC 62.462 68.421 0.00 0.00 0.00 3.97
169 184 2.109181 CTCCTCCCGCCGATTTCC 59.891 66.667 0.00 0.00 0.00 3.13
247 268 2.280186 GGCTACGCGGCATTAGCT 60.280 61.111 22.69 0.00 40.57 3.32
259 280 3.178540 ATGGAATCGGGGCGGCTAC 62.179 63.158 9.56 1.02 0.00 3.58
275 296 3.576356 GCGCGGTGGTGATGGATG 61.576 66.667 8.83 0.00 0.00 3.51
317 338 3.597728 GAGGAGGAGCGCTACCGG 61.598 72.222 18.20 0.00 34.32 5.28
318 339 3.597728 GGAGGAGGAGCGCTACCG 61.598 72.222 18.20 0.00 37.57 4.02
321 342 2.196229 GGAGGAGGAGGAGCGCTA 59.804 66.667 11.50 0.00 0.00 4.26
322 343 3.731766 GAGGAGGAGGAGGAGCGCT 62.732 68.421 11.27 11.27 0.00 5.92
324 345 2.520741 GGAGGAGGAGGAGGAGCG 60.521 72.222 0.00 0.00 0.00 5.03
325 346 1.152546 GAGGAGGAGGAGGAGGAGC 60.153 68.421 0.00 0.00 0.00 4.70
392 434 0.108520 TAAAAGCTACGGACCTGCGG 60.109 55.000 0.00 0.00 0.00 5.69
393 435 0.997196 GTAAAAGCTACGGACCTGCG 59.003 55.000 0.00 0.00 0.00 5.18
394 436 2.381725 AGTAAAAGCTACGGACCTGC 57.618 50.000 0.00 0.00 0.00 4.85
395 437 6.338937 AGAAATAGTAAAAGCTACGGACCTG 58.661 40.000 0.00 0.00 0.00 4.00
396 438 6.541934 AGAAATAGTAAAAGCTACGGACCT 57.458 37.500 0.00 0.00 0.00 3.85
397 439 7.040494 AGAAGAAATAGTAAAAGCTACGGACC 58.960 38.462 0.00 0.00 0.00 4.46
438 480 9.179909 GTAGTGTACTCCATATAGCAGTATGAT 57.820 37.037 9.25 0.00 39.69 2.45
439 481 8.383947 AGTAGTGTACTCCATATAGCAGTATGA 58.616 37.037 9.25 0.00 32.78 2.15
440 482 8.568676 AGTAGTGTACTCCATATAGCAGTATG 57.431 38.462 0.00 2.35 32.47 2.39
441 483 9.893634 CTAGTAGTGTACTCCATATAGCAGTAT 57.106 37.037 0.00 0.00 40.14 2.12
442 484 8.878211 ACTAGTAGTGTACTCCATATAGCAGTA 58.122 37.037 0.85 0.00 40.14 2.74
443 485 7.747690 ACTAGTAGTGTACTCCATATAGCAGT 58.252 38.462 0.85 0.00 40.14 4.40
444 486 9.893634 ATACTAGTAGTGTACTCCATATAGCAG 57.106 37.037 13.29 0.00 40.14 4.24
451 493 7.877097 CGGACTTATACTAGTAGTGTACTCCAT 59.123 40.741 19.82 7.39 40.14 3.41
452 494 7.212976 CGGACTTATACTAGTAGTGTACTCCA 58.787 42.308 19.82 4.44 40.14 3.86
453 495 6.648725 CCGGACTTATACTAGTAGTGTACTCC 59.351 46.154 13.29 14.04 40.14 3.85
454 496 7.437748 TCCGGACTTATACTAGTAGTGTACTC 58.562 42.308 13.29 7.52 40.14 2.59
455 497 7.070571 ACTCCGGACTTATACTAGTAGTGTACT 59.929 40.741 13.29 0.00 42.68 2.73
456 498 7.213678 ACTCCGGACTTATACTAGTAGTGTAC 58.786 42.308 13.29 6.77 0.00 2.90
457 499 7.366847 ACTCCGGACTTATACTAGTAGTGTA 57.633 40.000 13.29 7.87 0.00 2.90
458 500 6.245890 ACTCCGGACTTATACTAGTAGTGT 57.754 41.667 13.29 8.94 0.00 3.55
459 501 6.368516 GCTACTCCGGACTTATACTAGTAGTG 59.631 46.154 13.29 3.74 38.02 2.74
460 502 6.269769 AGCTACTCCGGACTTATACTAGTAGT 59.730 42.308 17.80 8.14 38.02 2.73
461 503 6.700352 AGCTACTCCGGACTTATACTAGTAG 58.300 44.000 0.00 8.70 38.50 2.57
462 504 6.678568 AGCTACTCCGGACTTATACTAGTA 57.321 41.667 0.00 4.77 0.00 1.82
571 634 4.563976 TCTTTCGTTCGTTCGTTCTTTCTT 59.436 37.500 2.67 0.00 0.00 2.52
573 636 4.191900 GTCTTTCGTTCGTTCGTTCTTTC 58.808 43.478 2.67 0.00 0.00 2.62
574 637 3.301388 CGTCTTTCGTTCGTTCGTTCTTT 60.301 43.478 2.67 0.00 34.52 2.52
575 638 2.214914 CGTCTTTCGTTCGTTCGTTCTT 59.785 45.455 2.67 0.00 34.52 2.52
576 639 1.777461 CGTCTTTCGTTCGTTCGTTCT 59.223 47.619 2.67 0.00 34.52 3.01
577 640 2.173775 CGTCTTTCGTTCGTTCGTTC 57.826 50.000 2.67 0.00 34.52 3.95
588 651 4.025229 TCTGACCAAAATTCACGTCTTTCG 60.025 41.667 0.00 0.00 46.00 3.46
589 652 5.418310 TCTGACCAAAATTCACGTCTTTC 57.582 39.130 0.00 0.00 0.00 2.62
590 653 4.275936 CCTCTGACCAAAATTCACGTCTTT 59.724 41.667 0.00 0.00 0.00 2.52
591 654 3.815401 CCTCTGACCAAAATTCACGTCTT 59.185 43.478 0.00 0.00 0.00 3.01
592 655 3.071023 TCCTCTGACCAAAATTCACGTCT 59.929 43.478 0.00 0.00 0.00 4.18
593 656 3.399330 TCCTCTGACCAAAATTCACGTC 58.601 45.455 0.00 0.00 0.00 4.34
594 657 3.485463 TCCTCTGACCAAAATTCACGT 57.515 42.857 0.00 0.00 0.00 4.49
595 658 5.182001 AGAAATCCTCTGACCAAAATTCACG 59.818 40.000 0.00 0.00 31.12 4.35
596 659 6.581171 AGAAATCCTCTGACCAAAATTCAC 57.419 37.500 0.00 0.00 31.12 3.18
597 660 6.824305 GAGAAATCCTCTGACCAAAATTCA 57.176 37.500 0.00 0.00 38.86 2.57
620 683 7.432350 AAAGCAACAAGATGTAGAAGAGAAG 57.568 36.000 0.00 0.00 0.00 2.85
621 684 7.716998 AGAAAAGCAACAAGATGTAGAAGAGAA 59.283 33.333 0.00 0.00 0.00 2.87
623 686 7.041508 ACAGAAAAGCAACAAGATGTAGAAGAG 60.042 37.037 0.00 0.00 0.00 2.85
627 690 6.942532 AACAGAAAAGCAACAAGATGTAGA 57.057 33.333 0.00 0.00 0.00 2.59
628 691 7.420800 AGAAACAGAAAAGCAACAAGATGTAG 58.579 34.615 0.00 0.00 0.00 2.74
631 697 6.197842 GTGAGAAACAGAAAAGCAACAAGATG 59.802 38.462 0.00 0.00 0.00 2.90
654 720 6.601613 TCCCTGCCAATAACAAGTAATAAGTG 59.398 38.462 0.00 0.00 0.00 3.16
660 726 4.374689 TGTCCCTGCCAATAACAAGTAA 57.625 40.909 0.00 0.00 0.00 2.24
662 728 2.969821 TGTCCCTGCCAATAACAAGT 57.030 45.000 0.00 0.00 0.00 3.16
663 729 4.806640 ATTTGTCCCTGCCAATAACAAG 57.193 40.909 0.00 0.00 32.03 3.16
666 732 6.524101 TCTTTATTTGTCCCTGCCAATAAC 57.476 37.500 0.00 0.00 0.00 1.89
670 736 5.144100 TCTTTCTTTATTTGTCCCTGCCAA 58.856 37.500 0.00 0.00 0.00 4.52
671 737 4.735369 TCTTTCTTTATTTGTCCCTGCCA 58.265 39.130 0.00 0.00 0.00 4.92
672 738 5.921962 ATCTTTCTTTATTTGTCCCTGCC 57.078 39.130 0.00 0.00 0.00 4.85
673 739 6.091305 GCAAATCTTTCTTTATTTGTCCCTGC 59.909 38.462 8.94 0.00 42.46 4.85
674 740 6.308766 CGCAAATCTTTCTTTATTTGTCCCTG 59.691 38.462 8.94 0.00 42.46 4.45
684 755 9.859427 AATGAATCAATCGCAAATCTTTCTTTA 57.141 25.926 0.00 0.00 0.00 1.85
718 789 9.624697 GCAGTTAGTAACAATCAATCAAATCAA 57.375 29.630 15.28 0.00 0.00 2.57
719 790 9.013229 AGCAGTTAGTAACAATCAATCAAATCA 57.987 29.630 15.28 0.00 0.00 2.57
720 791 9.846248 AAGCAGTTAGTAACAATCAATCAAATC 57.154 29.630 15.28 0.00 0.00 2.17
721 792 9.630098 CAAGCAGTTAGTAACAATCAATCAAAT 57.370 29.630 15.28 0.00 0.00 2.32
722 793 8.845227 TCAAGCAGTTAGTAACAATCAATCAAA 58.155 29.630 15.28 0.00 0.00 2.69
723 794 8.389779 TCAAGCAGTTAGTAACAATCAATCAA 57.610 30.769 15.28 0.00 0.00 2.57
724 795 7.361201 GCTCAAGCAGTTAGTAACAATCAATCA 60.361 37.037 15.28 0.00 41.59 2.57
725 796 6.963805 GCTCAAGCAGTTAGTAACAATCAATC 59.036 38.462 15.28 0.00 41.59 2.67
726 797 6.846350 GCTCAAGCAGTTAGTAACAATCAAT 58.154 36.000 15.28 0.00 41.59 2.57
727 798 6.241207 GCTCAAGCAGTTAGTAACAATCAA 57.759 37.500 15.28 0.00 41.59 2.57
728 799 5.862924 GCTCAAGCAGTTAGTAACAATCA 57.137 39.130 15.28 0.00 41.59 2.57
752 823 2.609916 CTCTGCTCTGCAATCAGTCATG 59.390 50.000 8.70 0.00 38.41 3.07
753 824 2.420269 CCTCTGCTCTGCAATCAGTCAT 60.420 50.000 8.70 0.00 38.41 3.06
757 828 0.392595 TGCCTCTGCTCTGCAATCAG 60.393 55.000 0.00 0.00 38.41 2.90
761 832 1.174712 GGTTTGCCTCTGCTCTGCAA 61.175 55.000 0.00 0.00 42.77 4.08
763 834 2.338785 GGGTTTGCCTCTGCTCTGC 61.339 63.158 0.00 0.00 38.71 4.26
764 835 1.676967 GGGGTTTGCCTCTGCTCTG 60.677 63.158 0.00 0.00 38.71 3.35
766 837 0.613012 ATTGGGGTTTGCCTCTGCTC 60.613 55.000 0.00 0.00 35.83 4.26
767 838 0.178924 AATTGGGGTTTGCCTCTGCT 60.179 50.000 0.00 0.00 35.83 4.24
790 1123 0.995803 AGGAAGGAAGGAAGGAAGGC 59.004 55.000 0.00 0.00 0.00 4.35
791 1124 2.025793 GGAAGGAAGGAAGGAAGGAAGG 60.026 54.545 0.00 0.00 0.00 3.46
792 1125 2.916269 AGGAAGGAAGGAAGGAAGGAAG 59.084 50.000 0.00 0.00 0.00 3.46
793 1126 3.005529 AGGAAGGAAGGAAGGAAGGAA 57.994 47.619 0.00 0.00 0.00 3.36
794 1127 2.743131 AGGAAGGAAGGAAGGAAGGA 57.257 50.000 0.00 0.00 0.00 3.36
795 1128 2.025793 GGAAGGAAGGAAGGAAGGAAGG 60.026 54.545 0.00 0.00 0.00 3.46
796 1129 2.916269 AGGAAGGAAGGAAGGAAGGAAG 59.084 50.000 0.00 0.00 0.00 3.46
797 1130 3.005529 AGGAAGGAAGGAAGGAAGGAA 57.994 47.619 0.00 0.00 0.00 3.36
800 1133 3.329225 ACTCAAGGAAGGAAGGAAGGAAG 59.671 47.826 0.00 0.00 0.00 3.46
802 1135 2.907042 GACTCAAGGAAGGAAGGAAGGA 59.093 50.000 0.00 0.00 0.00 3.36
822 1155 2.881513 GACTGACTGACTGACTGACTGA 59.118 50.000 0.00 0.00 0.00 3.41
831 1164 2.620585 TGACTGACTGACTGACTGACTG 59.379 50.000 0.00 0.00 0.00 3.51
832 1165 2.884012 CTGACTGACTGACTGACTGACT 59.116 50.000 0.00 0.00 0.00 3.41
833 1166 2.030363 CCTGACTGACTGACTGACTGAC 60.030 54.545 0.00 0.00 0.00 3.51
834 1167 2.158608 TCCTGACTGACTGACTGACTGA 60.159 50.000 0.00 0.00 0.00 3.41
881 1223 3.434641 CAGCAACTGACTCTTGTGGTATG 59.565 47.826 0.00 0.00 32.44 2.39
915 1261 9.421806 GACCAGATTCAGATTCAGAGTAATATG 57.578 37.037 0.00 0.00 30.93 1.78
918 1264 7.344093 TCAGACCAGATTCAGATTCAGAGTAAT 59.656 37.037 0.00 0.00 0.00 1.89
919 1265 6.665248 TCAGACCAGATTCAGATTCAGAGTAA 59.335 38.462 0.00 0.00 0.00 2.24
920 1266 6.190587 TCAGACCAGATTCAGATTCAGAGTA 58.809 40.000 0.00 0.00 0.00 2.59
923 1269 5.718607 TCTTCAGACCAGATTCAGATTCAGA 59.281 40.000 0.00 0.00 0.00 3.27
924 1270 5.975282 TCTTCAGACCAGATTCAGATTCAG 58.025 41.667 0.00 0.00 0.00 3.02
926 1272 7.678947 TTTTCTTCAGACCAGATTCAGATTC 57.321 36.000 0.00 0.00 0.00 2.52
927 1273 7.668886 ACATTTTCTTCAGACCAGATTCAGATT 59.331 33.333 0.00 0.00 0.00 2.40
928 1274 7.120873 CACATTTTCTTCAGACCAGATTCAGAT 59.879 37.037 0.00 0.00 0.00 2.90
929 1275 6.429078 CACATTTTCTTCAGACCAGATTCAGA 59.571 38.462 0.00 0.00 0.00 3.27
930 1276 6.609533 CACATTTTCTTCAGACCAGATTCAG 58.390 40.000 0.00 0.00 0.00 3.02
931 1277 5.048504 GCACATTTTCTTCAGACCAGATTCA 60.049 40.000 0.00 0.00 0.00 2.57
932 1278 5.182760 AGCACATTTTCTTCAGACCAGATTC 59.817 40.000 0.00 0.00 0.00 2.52
933 1279 5.075493 AGCACATTTTCTTCAGACCAGATT 58.925 37.500 0.00 0.00 0.00 2.40
934 1280 4.660168 AGCACATTTTCTTCAGACCAGAT 58.340 39.130 0.00 0.00 0.00 2.90
935 1281 4.067896 GAGCACATTTTCTTCAGACCAGA 58.932 43.478 0.00 0.00 0.00 3.86
936 1282 4.070716 AGAGCACATTTTCTTCAGACCAG 58.929 43.478 0.00 0.00 0.00 4.00
937 1283 4.090761 AGAGCACATTTTCTTCAGACCA 57.909 40.909 0.00 0.00 0.00 4.02
938 1284 5.040715 GAAGAGCACATTTTCTTCAGACC 57.959 43.478 8.84 0.00 45.43 3.85
952 1298 5.410746 TTCATTCATTCAGAGTGAAGAGCAC 59.589 40.000 13.30 0.00 44.84 4.40
953 1299 5.156608 TCATTCATTCAGAGTGAAGAGCA 57.843 39.130 13.30 0.00 39.68 4.26
959 1305 8.570068 TTCATTCATTCATTCATTCAGAGTGA 57.430 30.769 0.00 0.00 40.73 3.41
960 1306 9.237846 CATTCATTCATTCATTCATTCAGAGTG 57.762 33.333 0.00 0.00 35.45 3.51
961 1307 9.185680 TCATTCATTCATTCATTCATTCAGAGT 57.814 29.630 0.00 0.00 0.00 3.24
977 1323 5.191727 ACATACCAGGGTTCATTCATTCA 57.808 39.130 0.00 0.00 0.00 2.57
978 1324 6.207417 CCATACATACCAGGGTTCATTCATTC 59.793 42.308 0.00 0.00 0.00 2.67
979 1325 6.070656 CCATACATACCAGGGTTCATTCATT 58.929 40.000 0.00 0.00 0.00 2.57
980 1326 5.134339 ACCATACATACCAGGGTTCATTCAT 59.866 40.000 0.00 0.00 0.00 2.57
981 1327 4.476846 ACCATACATACCAGGGTTCATTCA 59.523 41.667 0.00 0.00 0.00 2.57
982 1328 5.048846 ACCATACATACCAGGGTTCATTC 57.951 43.478 0.00 0.00 0.00 2.67
983 1329 5.908831 TCTACCATACATACCAGGGTTCATT 59.091 40.000 0.00 0.00 33.14 2.57
984 1330 5.473273 TCTACCATACATACCAGGGTTCAT 58.527 41.667 0.00 0.00 33.14 2.57
985 1331 4.886163 TCTACCATACATACCAGGGTTCA 58.114 43.478 0.00 0.00 33.14 3.18
986 1332 4.262506 GCTCTACCATACATACCAGGGTTC 60.263 50.000 0.00 0.00 33.14 3.62
987 1333 3.646637 GCTCTACCATACATACCAGGGTT 59.353 47.826 0.00 0.00 33.14 4.11
988 1334 3.240302 GCTCTACCATACATACCAGGGT 58.760 50.000 0.00 0.00 35.66 4.34
1701 2087 0.311477 GCGACTCGGTTATCTCCCTC 59.689 60.000 0.00 0.00 0.00 4.30
1740 2126 2.513259 AACCACGTCCGGGTCACAT 61.513 57.895 0.00 0.00 37.77 3.21
1742 2128 2.647680 TTCAACCACGTCCGGGTCAC 62.648 60.000 0.00 0.00 37.77 3.67
1913 2299 1.604278 GAATGGCATAGCTCGTTTCCC 59.396 52.381 0.00 0.00 0.00 3.97
1929 2315 3.753272 CAGGTAAGACCAACACCAGAATG 59.247 47.826 0.00 0.00 41.95 2.67
1938 2324 2.572104 ACCATCCTCAGGTAAGACCAAC 59.428 50.000 0.00 0.00 41.95 3.77
1977 2363 0.534412 CGACAATCTCCAGCTCCTGT 59.466 55.000 0.00 0.00 0.00 4.00
2040 2426 0.534873 GCTGAGACTCCTCCAGAACC 59.465 60.000 0.00 0.00 38.66 3.62
2046 2432 0.104671 GCATCAGCTGAGACTCCTCC 59.895 60.000 22.96 0.27 38.66 4.30
2055 2441 0.179116 GCTTCTCTCGCATCAGCTGA 60.179 55.000 20.79 20.79 39.10 4.26
2202 2588 1.550072 TCCTGTTGCATCATCGAGACA 59.450 47.619 0.00 0.00 0.00 3.41
2286 2672 4.156373 TGCATGACATCATTCATCAACGTT 59.844 37.500 0.00 0.00 33.74 3.99
2319 2705 4.223032 AGAGATAAGTGTTCACGGTCCATT 59.777 41.667 0.00 0.00 0.00 3.16
2331 2717 3.370104 CCTCCTCACCAGAGATAAGTGT 58.630 50.000 0.00 0.00 44.98 3.55
2355 2741 1.661463 TCAAGGAGTGGAGGCTGAAT 58.339 50.000 0.00 0.00 0.00 2.57
2418 2804 3.502123 TGAAACTCGAAATCAACCCCT 57.498 42.857 0.00 0.00 0.00 4.79
2693 3079 1.305219 TATTTGGCTGGCAGACGCAC 61.305 55.000 20.86 0.00 41.24 5.34
2913 3305 7.142680 AGAAAACAAACTGAAAAAGTGACGAA 58.857 30.769 0.00 0.00 39.81 3.85
3192 3594 9.546909 CATCATGTTCACTAATAGTTTCAACAC 57.453 33.333 10.02 0.00 0.00 3.32
3253 3658 8.484641 TGAGCACAAAGAGAAAGATAGTTATG 57.515 34.615 0.00 0.00 0.00 1.90
3254 3659 9.323985 GATGAGCACAAAGAGAAAGATAGTTAT 57.676 33.333 0.00 0.00 0.00 1.89
3266 3671 4.694037 TGAACTGATGATGAGCACAAAGAG 59.306 41.667 0.00 0.00 0.00 2.85
3282 3687 5.768980 ATTTCTCCTGAGGAATGAACTGA 57.231 39.130 1.41 0.00 35.38 3.41
3283 3688 9.050601 GTAATATTTCTCCTGAGGAATGAACTG 57.949 37.037 1.41 0.00 37.24 3.16
3284 3689 8.214364 GGTAATATTTCTCCTGAGGAATGAACT 58.786 37.037 1.41 0.74 37.24 3.01
3298 3703 2.542595 CCACGCCACGGTAATATTTCTC 59.457 50.000 0.00 0.00 0.00 2.87
3300 3705 1.003223 GCCACGCCACGGTAATATTTC 60.003 52.381 0.00 0.00 0.00 2.17
3302 3707 1.155424 CGCCACGCCACGGTAATATT 61.155 55.000 0.00 0.00 0.00 1.28
3305 3710 4.382320 ACGCCACGCCACGGTAAT 62.382 61.111 0.00 0.00 0.00 1.89
3316 3721 1.654137 CAAGCAAACGACACGCCAC 60.654 57.895 0.00 0.00 0.00 5.01
3317 3722 1.163420 ATCAAGCAAACGACACGCCA 61.163 50.000 0.00 0.00 0.00 5.69
3318 3723 0.725784 CATCAAGCAAACGACACGCC 60.726 55.000 0.00 0.00 0.00 5.68
3319 3724 0.041312 ACATCAAGCAAACGACACGC 60.041 50.000 0.00 0.00 0.00 5.34
3320 3725 1.003972 ACACATCAAGCAAACGACACG 60.004 47.619 0.00 0.00 0.00 4.49
3354 3775 5.990120 AAGCCTCAAGTCAGCAAATAATT 57.010 34.783 0.00 0.00 0.00 1.40
3361 3782 3.423539 ACATAAAGCCTCAAGTCAGCA 57.576 42.857 0.00 0.00 0.00 4.41
3434 3855 1.102154 AGCATGACCGTCTCTCTCAG 58.898 55.000 0.00 0.00 0.00 3.35
3778 4199 1.296392 CACAAGGGCCACGATCAGA 59.704 57.895 6.18 0.00 0.00 3.27
3930 4351 5.703978 ATCTATCAAGATCCACAGAGACG 57.296 43.478 0.00 0.00 38.04 4.18
3931 4352 6.815089 ACAATCTATCAAGATCCACAGAGAC 58.185 40.000 0.00 0.00 41.81 3.36
3932 4353 7.093156 ACAACAATCTATCAAGATCCACAGAGA 60.093 37.037 0.00 0.00 41.81 3.10
4047 4477 9.807921 TGTACAATTAATTCCTTCCTCTCTTTT 57.192 29.630 0.00 0.00 0.00 2.27
4048 4478 9.454859 CTGTACAATTAATTCCTTCCTCTCTTT 57.545 33.333 0.00 0.00 0.00 2.52
4049 4479 8.049721 CCTGTACAATTAATTCCTTCCTCTCTT 58.950 37.037 0.00 0.00 0.00 2.85
4050 4480 7.403231 TCCTGTACAATTAATTCCTTCCTCTCT 59.597 37.037 0.00 0.00 0.00 3.10
4051 4481 7.565680 TCCTGTACAATTAATTCCTTCCTCTC 58.434 38.462 0.00 0.00 0.00 3.20
4052 4482 7.510675 TCCTGTACAATTAATTCCTTCCTCT 57.489 36.000 0.00 0.00 0.00 3.69
4053 4483 7.283354 CCTTCCTGTACAATTAATTCCTTCCTC 59.717 40.741 0.00 0.00 0.00 3.71
4054 4484 7.036863 TCCTTCCTGTACAATTAATTCCTTCCT 60.037 37.037 0.00 0.00 0.00 3.36
4055 4485 7.116736 TCCTTCCTGTACAATTAATTCCTTCC 58.883 38.462 0.00 0.00 0.00 3.46
4056 4486 8.575649 TTCCTTCCTGTACAATTAATTCCTTC 57.424 34.615 0.00 0.00 0.00 3.46
4095 4525 4.102367 CCAAAATTCCCCACCTTTCTTCAA 59.898 41.667 0.00 0.00 0.00 2.69
4137 4594 6.947376 AGCCCTAAAAAGAGAACCTAAGTA 57.053 37.500 0.00 0.00 0.00 2.24
4208 4669 0.113580 GGTTGCCCCCAAAGGAGTTA 59.886 55.000 0.00 0.00 38.24 2.24
4214 4675 1.908299 GACCTGGTTGCCCCCAAAG 60.908 63.158 0.00 0.00 33.07 2.77
4234 4695 5.712446 TGTCTAGCTACTTCATGACTTGACT 59.288 40.000 18.51 8.43 35.21 3.41
4239 4700 6.682611 GCATCTTGTCTAGCTACTTCATGACT 60.683 42.308 0.00 0.00 0.00 3.41
4244 4705 6.775594 TTAGCATCTTGTCTAGCTACTTCA 57.224 37.500 0.00 0.00 39.11 3.02
4246 4707 7.497249 CCAAATTAGCATCTTGTCTAGCTACTT 59.503 37.037 0.00 0.00 39.11 2.24
4247 4708 6.989169 CCAAATTAGCATCTTGTCTAGCTACT 59.011 38.462 0.00 0.00 39.11 2.57
4248 4709 6.763610 ACCAAATTAGCATCTTGTCTAGCTAC 59.236 38.462 0.00 0.00 39.11 3.58
4250 4711 5.587844 CACCAAATTAGCATCTTGTCTAGCT 59.412 40.000 0.00 0.00 40.92 3.32
4251 4712 5.355350 ACACCAAATTAGCATCTTGTCTAGC 59.645 40.000 0.00 0.00 0.00 3.42
4252 4713 6.183360 CCACACCAAATTAGCATCTTGTCTAG 60.183 42.308 0.00 0.00 0.00 2.43
4253 4714 5.647658 CCACACCAAATTAGCATCTTGTCTA 59.352 40.000 0.00 0.00 0.00 2.59
4254 4715 4.460382 CCACACCAAATTAGCATCTTGTCT 59.540 41.667 0.00 0.00 0.00 3.41
4255 4716 4.218417 ACCACACCAAATTAGCATCTTGTC 59.782 41.667 0.00 0.00 0.00 3.18
4257 4744 4.380867 GGACCACACCAAATTAGCATCTTG 60.381 45.833 0.00 0.00 0.00 3.02
4259 4746 3.245229 TGGACCACACCAAATTAGCATCT 60.245 43.478 0.00 0.00 36.96 2.90
4261 4748 3.091545 CTGGACCACACCAAATTAGCAT 58.908 45.455 0.00 0.00 39.59 3.79
4263 4750 1.818674 CCTGGACCACACCAAATTAGC 59.181 52.381 0.00 0.00 39.59 3.09
4269 4756 2.153401 CCTCCCTGGACCACACCAA 61.153 63.158 0.00 0.00 39.59 3.67
4274 4761 4.677151 ACCCCCTCCCTGGACCAC 62.677 72.222 0.00 0.00 38.35 4.16
4283 4770 1.266178 CCAAATCAAACACCCCCTCC 58.734 55.000 0.00 0.00 0.00 4.30
4286 4773 3.007506 CCTAAACCAAATCAAACACCCCC 59.992 47.826 0.00 0.00 0.00 5.40
4287 4774 3.644265 ACCTAAACCAAATCAAACACCCC 59.356 43.478 0.00 0.00 0.00 4.95
4288 4775 4.948341 ACCTAAACCAAATCAAACACCC 57.052 40.909 0.00 0.00 0.00 4.61
4291 4778 6.109359 CACCAAACCTAAACCAAATCAAACA 58.891 36.000 0.00 0.00 0.00 2.83
4296 4783 3.323691 AGCCACCAAACCTAAACCAAATC 59.676 43.478 0.00 0.00 0.00 2.17
4297 4784 3.070878 CAGCCACCAAACCTAAACCAAAT 59.929 43.478 0.00 0.00 0.00 2.32
4298 4785 2.432510 CAGCCACCAAACCTAAACCAAA 59.567 45.455 0.00 0.00 0.00 3.28
4299 4786 2.035632 CAGCCACCAAACCTAAACCAA 58.964 47.619 0.00 0.00 0.00 3.67
4301 4788 0.317160 GCAGCCACCAAACCTAAACC 59.683 55.000 0.00 0.00 0.00 3.27
4302 4789 1.036707 TGCAGCCACCAAACCTAAAC 58.963 50.000 0.00 0.00 0.00 2.01
4303 4790 1.036707 GTGCAGCCACCAAACCTAAA 58.963 50.000 0.00 0.00 35.92 1.85
4304 4791 0.184933 AGTGCAGCCACCAAACCTAA 59.815 50.000 0.00 0.00 43.09 2.69
4305 4792 0.184933 AAGTGCAGCCACCAAACCTA 59.815 50.000 0.00 0.00 43.09 3.08
4306 4793 1.076044 AAGTGCAGCCACCAAACCT 60.076 52.632 0.00 0.00 43.09 3.50
4347 4834 8.470805 AGGATAACAAGTCAGTATCAACACTAG 58.529 37.037 0.00 0.00 0.00 2.57
4386 4873 7.831193 AGTCTGCCTGATTATGATTTTGTACTT 59.169 33.333 0.00 0.00 0.00 2.24
4495 4990 8.049655 AGTTGCCTTTGTACTACTACTACTAC 57.950 38.462 0.00 0.00 0.00 2.73
4496 4991 8.641498 AAGTTGCCTTTGTACTACTACTACTA 57.359 34.615 0.00 0.00 0.00 1.82
4497 4992 7.536159 AAGTTGCCTTTGTACTACTACTACT 57.464 36.000 0.00 0.00 0.00 2.57
4498 4993 7.487509 GCTAAGTTGCCTTTGTACTACTACTAC 59.512 40.741 0.00 0.00 31.89 2.73
4499 4994 7.395489 AGCTAAGTTGCCTTTGTACTACTACTA 59.605 37.037 0.00 0.00 31.89 1.82
4500 4995 6.210984 AGCTAAGTTGCCTTTGTACTACTACT 59.789 38.462 0.00 0.00 31.89 2.57
4544 5039 6.656693 CCTCCTAACACTCATTCAAAACAGAT 59.343 38.462 0.00 0.00 0.00 2.90
4549 5044 5.690865 ACACCTCCTAACACTCATTCAAAA 58.309 37.500 0.00 0.00 0.00 2.44
4576 5071 1.888512 TGGAACCTCAGCTGCAAATTC 59.111 47.619 9.47 9.73 0.00 2.17
4599 5094 3.901844 TGCCTTGGATCCTACTACCATAC 59.098 47.826 14.23 0.00 33.56 2.39
4624 5119 6.598850 TGTAGCAATCACAATCAATCAGCTAA 59.401 34.615 0.00 0.00 34.32 3.09
4626 5121 4.945543 TGTAGCAATCACAATCAATCAGCT 59.054 37.500 0.00 0.00 0.00 4.24
4671 5167 4.005650 CACATTGTAGTGTCTCCTTGCAT 58.994 43.478 0.00 0.00 34.83 3.96
4672 5168 3.402110 CACATTGTAGTGTCTCCTTGCA 58.598 45.455 0.00 0.00 34.83 4.08
4673 5169 2.160417 GCACATTGTAGTGTCTCCTTGC 59.840 50.000 0.00 0.00 41.52 4.01
4674 5170 3.402110 TGCACATTGTAGTGTCTCCTTG 58.598 45.455 0.00 0.00 41.52 3.61
4675 5171 3.769739 TGCACATTGTAGTGTCTCCTT 57.230 42.857 0.00 0.00 41.52 3.36
4676 5172 3.603532 CATGCACATTGTAGTGTCTCCT 58.396 45.455 0.00 0.00 41.52 3.69
4677 5173 2.679837 CCATGCACATTGTAGTGTCTCC 59.320 50.000 0.00 0.00 41.52 3.71
4678 5174 3.599343 TCCATGCACATTGTAGTGTCTC 58.401 45.455 0.00 0.00 41.52 3.36
4679 5175 3.701205 TCCATGCACATTGTAGTGTCT 57.299 42.857 0.00 0.00 41.52 3.41
4680 5176 4.970662 ATTCCATGCACATTGTAGTGTC 57.029 40.909 0.00 0.00 41.52 3.67
4681 5177 5.477984 AGAAATTCCATGCACATTGTAGTGT 59.522 36.000 0.00 0.00 41.52 3.55
4682 5178 5.957798 AGAAATTCCATGCACATTGTAGTG 58.042 37.500 0.00 0.00 42.37 2.74
4683 5179 5.948162 AGAGAAATTCCATGCACATTGTAGT 59.052 36.000 0.00 0.00 0.00 2.73
4684 5180 6.318144 AGAGAGAAATTCCATGCACATTGTAG 59.682 38.462 0.00 0.00 0.00 2.74
4685 5181 6.182627 AGAGAGAAATTCCATGCACATTGTA 58.817 36.000 0.00 0.00 0.00 2.41
4686 5182 5.014858 AGAGAGAAATTCCATGCACATTGT 58.985 37.500 0.00 0.00 0.00 2.71
4687 5183 5.124936 TGAGAGAGAAATTCCATGCACATTG 59.875 40.000 0.00 0.00 0.00 2.82
4688 5184 5.258841 TGAGAGAGAAATTCCATGCACATT 58.741 37.500 0.00 0.00 0.00 2.71
4689 5185 4.851843 TGAGAGAGAAATTCCATGCACAT 58.148 39.130 0.00 0.00 0.00 3.21
4690 5186 4.259356 CTGAGAGAGAAATTCCATGCACA 58.741 43.478 0.00 0.00 0.00 4.57
4691 5187 4.260170 ACTGAGAGAGAAATTCCATGCAC 58.740 43.478 0.00 0.00 0.00 4.57
4692 5188 4.564782 ACTGAGAGAGAAATTCCATGCA 57.435 40.909 0.00 0.00 0.00 3.96
4693 5189 4.335037 GGAACTGAGAGAGAAATTCCATGC 59.665 45.833 0.00 0.00 36.44 4.06
4694 5190 4.880696 GGGAACTGAGAGAGAAATTCCATG 59.119 45.833 0.00 0.00 37.86 3.66
4695 5191 4.537688 TGGGAACTGAGAGAGAAATTCCAT 59.462 41.667 0.00 0.00 37.86 3.41
4696 5192 3.909995 TGGGAACTGAGAGAGAAATTCCA 59.090 43.478 0.00 0.00 37.86 3.53
4697 5193 4.019771 AGTGGGAACTGAGAGAGAAATTCC 60.020 45.833 0.00 0.00 35.81 3.01
4698 5194 5.159273 AGTGGGAACTGAGAGAGAAATTC 57.841 43.478 0.00 0.00 0.00 2.17
4699 5195 5.574970 AAGTGGGAACTGAGAGAGAAATT 57.425 39.130 0.00 0.00 0.00 1.82
4700 5196 5.312079 CAAAGTGGGAACTGAGAGAGAAAT 58.688 41.667 0.00 0.00 0.00 2.17
4701 5197 4.444876 CCAAAGTGGGAACTGAGAGAGAAA 60.445 45.833 0.00 0.00 32.67 2.52
4702 5198 3.071602 CCAAAGTGGGAACTGAGAGAGAA 59.928 47.826 0.00 0.00 32.67 2.87
4703 5199 2.634940 CCAAAGTGGGAACTGAGAGAGA 59.365 50.000 0.00 0.00 32.67 3.10
4704 5200 2.370189 ACCAAAGTGGGAACTGAGAGAG 59.630 50.000 0.00 0.00 43.37 3.20
4705 5201 2.408565 ACCAAAGTGGGAACTGAGAGA 58.591 47.619 0.00 0.00 43.37 3.10
4706 5202 2.938956 ACCAAAGTGGGAACTGAGAG 57.061 50.000 0.00 0.00 43.37 3.20
4707 5203 3.009033 CCATACCAAAGTGGGAACTGAGA 59.991 47.826 0.00 0.00 43.37 3.27
4708 5204 3.244911 ACCATACCAAAGTGGGAACTGAG 60.245 47.826 0.00 0.00 43.37 3.35
4709 5205 2.714250 ACCATACCAAAGTGGGAACTGA 59.286 45.455 0.00 0.00 43.37 3.41
4710 5206 3.154827 ACCATACCAAAGTGGGAACTG 57.845 47.619 0.00 0.00 43.37 3.16
4711 5207 5.222254 ACAATACCATACCAAAGTGGGAACT 60.222 40.000 0.00 0.00 43.37 3.01
4712 5208 5.014202 ACAATACCATACCAAAGTGGGAAC 58.986 41.667 0.00 0.00 43.37 3.62
4713 5209 5.263872 ACAATACCATACCAAAGTGGGAA 57.736 39.130 0.00 0.00 43.37 3.97
4714 5210 4.938575 ACAATACCATACCAAAGTGGGA 57.061 40.909 0.00 0.00 43.37 4.37
4715 5211 5.013547 TCAACAATACCATACCAAAGTGGG 58.986 41.667 0.00 0.00 43.37 4.61
4716 5212 5.475220 TGTCAACAATACCATACCAAAGTGG 59.525 40.000 0.00 0.00 45.02 4.00
4717 5213 6.567687 TGTCAACAATACCATACCAAAGTG 57.432 37.500 0.00 0.00 0.00 3.16
4718 5214 7.775053 ATTGTCAACAATACCATACCAAAGT 57.225 32.000 6.58 0.00 44.09 2.66
4719 5215 8.522830 AGAATTGTCAACAATACCATACCAAAG 58.477 33.333 8.70 0.00 45.06 2.77
4720 5216 8.303156 CAGAATTGTCAACAATACCATACCAAA 58.697 33.333 8.70 0.00 45.06 3.28
4721 5217 7.667635 TCAGAATTGTCAACAATACCATACCAA 59.332 33.333 8.70 0.00 45.06 3.67
4722 5218 7.120579 GTCAGAATTGTCAACAATACCATACCA 59.879 37.037 8.70 0.00 45.06 3.25
4723 5219 7.415206 GGTCAGAATTGTCAACAATACCATACC 60.415 40.741 15.73 12.52 45.06 2.73
4724 5220 7.336931 AGGTCAGAATTGTCAACAATACCATAC 59.663 37.037 19.97 11.21 45.06 2.39
4725 5221 7.336679 CAGGTCAGAATTGTCAACAATACCATA 59.663 37.037 19.97 2.73 45.06 2.74
4726 5222 6.151648 CAGGTCAGAATTGTCAACAATACCAT 59.848 38.462 19.97 3.77 45.06 3.55
4727 5223 5.473162 CAGGTCAGAATTGTCAACAATACCA 59.527 40.000 19.97 2.26 45.06 3.25
4728 5224 5.106157 CCAGGTCAGAATTGTCAACAATACC 60.106 44.000 13.90 13.90 45.06 2.73
4729 5225 5.473504 ACCAGGTCAGAATTGTCAACAATAC 59.526 40.000 8.70 3.88 45.06 1.89
4730 5226 5.630121 ACCAGGTCAGAATTGTCAACAATA 58.370 37.500 8.70 0.00 45.06 1.90
4732 5228 3.897239 ACCAGGTCAGAATTGTCAACAA 58.103 40.909 0.00 0.00 40.51 2.83
4733 5229 3.576078 ACCAGGTCAGAATTGTCAACA 57.424 42.857 0.00 0.00 0.00 3.33
4734 5230 3.550842 GCAACCAGGTCAGAATTGTCAAC 60.551 47.826 0.00 0.00 0.00 3.18
4735 5231 2.622942 GCAACCAGGTCAGAATTGTCAA 59.377 45.455 0.00 0.00 0.00 3.18
4736 5232 2.229792 GCAACCAGGTCAGAATTGTCA 58.770 47.619 0.00 0.00 0.00 3.58
4737 5233 1.541588 GGCAACCAGGTCAGAATTGTC 59.458 52.381 0.00 0.00 0.00 3.18
4738 5234 1.133513 TGGCAACCAGGTCAGAATTGT 60.134 47.619 0.00 0.00 0.00 2.71
4739 5235 1.270550 GTGGCAACCAGGTCAGAATTG 59.729 52.381 0.00 0.00 32.34 2.32
4740 5236 1.620822 GTGGCAACCAGGTCAGAATT 58.379 50.000 0.00 0.00 32.34 2.17
4741 5237 0.606401 CGTGGCAACCAGGTCAGAAT 60.606 55.000 0.00 0.00 35.03 2.40
4742 5238 1.227823 CGTGGCAACCAGGTCAGAA 60.228 57.895 0.00 0.00 35.03 3.02
4743 5239 1.691195 TTCGTGGCAACCAGGTCAGA 61.691 55.000 6.24 0.00 39.97 3.27
4744 5240 0.606401 ATTCGTGGCAACCAGGTCAG 60.606 55.000 6.24 0.00 39.97 3.51
4745 5241 0.888736 CATTCGTGGCAACCAGGTCA 60.889 55.000 6.24 0.00 39.97 4.02
4746 5242 0.605319 TCATTCGTGGCAACCAGGTC 60.605 55.000 6.24 0.00 39.97 3.85
4747 5243 0.179004 TTCATTCGTGGCAACCAGGT 60.179 50.000 6.24 0.00 39.97 4.00
4748 5244 1.135315 CATTCATTCGTGGCAACCAGG 60.135 52.381 0.00 0.00 40.34 4.45
4749 5245 1.811965 TCATTCATTCGTGGCAACCAG 59.188 47.619 0.00 0.00 32.34 4.00
4750 5246 1.902938 TCATTCATTCGTGGCAACCA 58.097 45.000 0.00 0.00 0.00 3.67
4751 5247 3.119531 TCATTCATTCATTCGTGGCAACC 60.120 43.478 0.00 0.00 0.00 3.77
4752 5248 4.095410 TCATTCATTCATTCGTGGCAAC 57.905 40.909 0.00 0.00 0.00 4.17
4753 5249 4.780275 TTCATTCATTCATTCGTGGCAA 57.220 36.364 0.00 0.00 0.00 4.52
4754 5250 4.987408 ATTCATTCATTCATTCGTGGCA 57.013 36.364 0.00 0.00 0.00 4.92
4755 5251 5.585390 AGAATTCATTCATTCATTCGTGGC 58.415 37.500 8.44 0.00 39.23 5.01
4756 5252 7.675270 GAAGAATTCATTCATTCATTCGTGG 57.325 36.000 8.44 0.00 46.62 4.94
4768 5264 7.683704 AGCATTGTAGCATGGAAGAATTCATTC 60.684 37.037 8.44 8.39 41.72 2.67
4769 5265 6.097839 AGCATTGTAGCATGGAAGAATTCATT 59.902 34.615 8.44 0.00 41.72 2.57
4770 5266 5.597182 AGCATTGTAGCATGGAAGAATTCAT 59.403 36.000 8.44 0.00 41.72 2.57
4771 5267 4.951715 AGCATTGTAGCATGGAAGAATTCA 59.048 37.500 8.44 0.00 41.72 2.57
4772 5268 5.511234 AGCATTGTAGCATGGAAGAATTC 57.489 39.130 0.00 0.00 40.06 2.17
4773 5269 5.927281 AAGCATTGTAGCATGGAAGAATT 57.073 34.783 0.00 0.00 36.85 2.17
4774 5270 5.927281 AAAGCATTGTAGCATGGAAGAAT 57.073 34.783 0.00 0.00 36.85 2.40
4775 5271 5.726980 AAAAGCATTGTAGCATGGAAGAA 57.273 34.783 0.00 0.00 36.85 2.52
4776 5272 5.726980 AAAAAGCATTGTAGCATGGAAGA 57.273 34.783 0.00 0.00 36.85 2.87
4806 5302 8.204160 CCTTCCTTTCCTTGTCTTGTTTATTTT 58.796 33.333 0.00 0.00 0.00 1.82
4807 5303 7.563556 TCCTTCCTTTCCTTGTCTTGTTTATTT 59.436 33.333 0.00 0.00 0.00 1.40
4808 5304 7.066781 TCCTTCCTTTCCTTGTCTTGTTTATT 58.933 34.615 0.00 0.00 0.00 1.40
4809 5305 6.610830 TCCTTCCTTTCCTTGTCTTGTTTAT 58.389 36.000 0.00 0.00 0.00 1.40
4810 5306 6.008696 TCCTTCCTTTCCTTGTCTTGTTTA 57.991 37.500 0.00 0.00 0.00 2.01
4811 5307 4.867086 TCCTTCCTTTCCTTGTCTTGTTT 58.133 39.130 0.00 0.00 0.00 2.83
4812 5308 4.464947 CTCCTTCCTTTCCTTGTCTTGTT 58.535 43.478 0.00 0.00 0.00 2.83
4813 5309 3.181439 CCTCCTTCCTTTCCTTGTCTTGT 60.181 47.826 0.00 0.00 0.00 3.16
4814 5310 3.073062 TCCTCCTTCCTTTCCTTGTCTTG 59.927 47.826 0.00 0.00 0.00 3.02
4815 5311 3.327439 TCCTCCTTCCTTTCCTTGTCTT 58.673 45.455 0.00 0.00 0.00 3.01
4816 5312 2.991580 TCCTCCTTCCTTTCCTTGTCT 58.008 47.619 0.00 0.00 0.00 3.41
4817 5313 3.790089 TTCCTCCTTCCTTTCCTTGTC 57.210 47.619 0.00 0.00 0.00 3.18
4818 5314 4.749048 AATTCCTCCTTCCTTTCCTTGT 57.251 40.909 0.00 0.00 0.00 3.16
4819 5315 4.835056 ACAAATTCCTCCTTCCTTTCCTTG 59.165 41.667 0.00 0.00 0.00 3.61
4820 5316 5.079998 ACAAATTCCTCCTTCCTTTCCTT 57.920 39.130 0.00 0.00 0.00 3.36
4821 5317 4.749048 ACAAATTCCTCCTTCCTTTCCT 57.251 40.909 0.00 0.00 0.00 3.36
4822 5318 4.832823 TCAACAAATTCCTCCTTCCTTTCC 59.167 41.667 0.00 0.00 0.00 3.13
4823 5319 5.565637 GCTCAACAAATTCCTCCTTCCTTTC 60.566 44.000 0.00 0.00 0.00 2.62
4824 5320 4.281941 GCTCAACAAATTCCTCCTTCCTTT 59.718 41.667 0.00 0.00 0.00 3.11
4825 5321 3.829026 GCTCAACAAATTCCTCCTTCCTT 59.171 43.478 0.00 0.00 0.00 3.36
4826 5322 3.425659 GCTCAACAAATTCCTCCTTCCT 58.574 45.455 0.00 0.00 0.00 3.36
4827 5323 2.493675 GGCTCAACAAATTCCTCCTTCC 59.506 50.000 0.00 0.00 0.00 3.46
4828 5324 3.425659 AGGCTCAACAAATTCCTCCTTC 58.574 45.455 0.00 0.00 0.00 3.46
4829 5325 3.425659 GAGGCTCAACAAATTCCTCCTT 58.574 45.455 10.25 0.00 37.85 3.36
4830 5326 3.078891 GAGGCTCAACAAATTCCTCCT 57.921 47.619 10.25 0.00 37.85 3.69
4832 5328 2.095461 GGGAGGCTCAACAAATTCCTC 58.905 52.381 17.69 0.00 41.87 3.71
4833 5329 1.272704 GGGGAGGCTCAACAAATTCCT 60.273 52.381 17.69 0.00 0.00 3.36
4834 5330 1.186200 GGGGAGGCTCAACAAATTCC 58.814 55.000 17.69 5.23 0.00 3.01
4835 5331 2.095461 GAGGGGAGGCTCAACAAATTC 58.905 52.381 17.69 0.18 0.00 2.17
4836 5332 1.272704 GGAGGGGAGGCTCAACAAATT 60.273 52.381 17.69 0.00 0.00 1.82
4837 5333 0.332972 GGAGGGGAGGCTCAACAAAT 59.667 55.000 17.69 0.00 0.00 2.32
4838 5334 1.767692 GGAGGGGAGGCTCAACAAA 59.232 57.895 17.69 0.00 0.00 2.83
4839 5335 2.231380 GGGAGGGGAGGCTCAACAA 61.231 63.158 17.69 0.00 0.00 2.83
4840 5336 2.610859 GGGAGGGGAGGCTCAACA 60.611 66.667 17.69 0.00 0.00 3.33
4841 5337 3.412408 GGGGAGGGGAGGCTCAAC 61.412 72.222 17.69 8.38 0.00 3.18
4842 5338 3.626596 AGGGGAGGGGAGGCTCAA 61.627 66.667 17.69 0.00 0.00 3.02
4843 5339 4.095400 GAGGGGAGGGGAGGCTCA 62.095 72.222 17.69 0.00 0.00 4.26
4844 5340 4.890306 GGAGGGGAGGGGAGGCTC 62.890 77.778 5.78 5.78 0.00 4.70
4847 5343 4.179599 GAGGGAGGGGAGGGGAGG 62.180 77.778 0.00 0.00 0.00 4.30
4848 5344 2.905676 CTTGAGGGAGGGGAGGGGAG 62.906 70.000 0.00 0.00 0.00 4.30
4849 5345 2.879490 TTGAGGGAGGGGAGGGGA 60.879 66.667 0.00 0.00 0.00 4.81
4850 5346 2.367512 CTTGAGGGAGGGGAGGGG 60.368 72.222 0.00 0.00 0.00 4.79
4851 5347 3.093172 GCTTGAGGGAGGGGAGGG 61.093 72.222 0.00 0.00 0.00 4.30
4852 5348 1.284841 AATGCTTGAGGGAGGGGAGG 61.285 60.000 0.00 0.00 0.00 4.30
4853 5349 0.182299 GAATGCTTGAGGGAGGGGAG 59.818 60.000 0.00 0.00 0.00 4.30
4854 5350 1.281925 GGAATGCTTGAGGGAGGGGA 61.282 60.000 0.00 0.00 0.00 4.81
4855 5351 1.228510 GGAATGCTTGAGGGAGGGG 59.771 63.158 0.00 0.00 0.00 4.79
4856 5352 0.554792 ATGGAATGCTTGAGGGAGGG 59.445 55.000 0.00 0.00 0.00 4.30
4857 5353 2.305009 GAATGGAATGCTTGAGGGAGG 58.695 52.381 0.00 0.00 0.00 4.30
4858 5354 2.686915 GTGAATGGAATGCTTGAGGGAG 59.313 50.000 0.00 0.00 0.00 4.30
4859 5355 2.621407 GGTGAATGGAATGCTTGAGGGA 60.621 50.000 0.00 0.00 0.00 4.20
4860 5356 1.753073 GGTGAATGGAATGCTTGAGGG 59.247 52.381 0.00 0.00 0.00 4.30
4861 5357 2.731572 AGGTGAATGGAATGCTTGAGG 58.268 47.619 0.00 0.00 0.00 3.86
4862 5358 4.015084 AGAAGGTGAATGGAATGCTTGAG 58.985 43.478 0.00 0.00 0.00 3.02
4863 5359 4.038271 AGAAGGTGAATGGAATGCTTGA 57.962 40.909 0.00 0.00 0.00 3.02
4864 5360 4.491676 CAAGAAGGTGAATGGAATGCTTG 58.508 43.478 0.00 0.00 0.00 4.01
4865 5361 3.512724 CCAAGAAGGTGAATGGAATGCTT 59.487 43.478 0.00 0.00 34.82 3.91
4866 5362 3.094572 CCAAGAAGGTGAATGGAATGCT 58.905 45.455 0.00 0.00 34.82 3.79
4867 5363 3.515330 CCAAGAAGGTGAATGGAATGC 57.485 47.619 0.00 0.00 34.82 3.56
4879 5375 6.540438 TTATCACTACCACTACCAAGAAGG 57.460 41.667 0.00 0.00 45.67 3.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.