Multiple sequence alignment - TraesCS2B01G022000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G022000 chr2B 100.000 3806 0 0 1 3806 10606685 10610490 0.000000e+00 7029.0
1 TraesCS2B01G022000 chr2B 97.639 1101 18 5 180 1280 603640076 603638984 0.000000e+00 1882.0
2 TraesCS2B01G022000 chr2B 92.424 396 23 3 3264 3655 26317649 26317257 3.320000e-155 558.0
3 TraesCS2B01G022000 chr2B 92.350 183 14 0 957 1139 260618034 260618216 1.050000e-65 261.0
4 TraesCS2B01G022000 chr2B 90.909 154 4 2 3655 3806 26317175 26317030 8.340000e-47 198.0
5 TraesCS2B01G022000 chr2B 98.701 77 1 0 3084 3160 800711670 800711594 1.840000e-28 137.0
6 TraesCS2B01G022000 chr2B 81.188 101 7 8 223 314 603640077 603639980 1.900000e-08 71.3
7 TraesCS2B01G022000 chr2B 81.000 100 7 8 224 314 10606864 10606960 6.820000e-08 69.4
8 TraesCS2B01G022000 chr2B 81.000 100 7 8 180 276 10606908 10606998 6.820000e-08 69.4
9 TraesCS2B01G022000 chr2B 81.000 100 7 7 180 276 603640032 603639942 6.820000e-08 69.4
10 TraesCS2B01G022000 chr7B 97.037 1991 49 6 1098 3082 111966020 111964034 0.000000e+00 3341.0
11 TraesCS2B01G022000 chr7B 96.457 2004 46 8 1098 3079 531598271 531600271 0.000000e+00 3284.0
12 TraesCS2B01G022000 chr7B 95.937 1895 73 4 1197 3090 96373127 96371236 0.000000e+00 3070.0
13 TraesCS2B01G022000 chr7B 97.408 926 13 1 324 1238 531597585 531598510 0.000000e+00 1567.0
14 TraesCS2B01G022000 chr7B 94.400 1000 38 6 324 1311 111966706 111965713 0.000000e+00 1520.0
15 TraesCS2B01G022000 chr7B 95.618 890 32 5 324 1212 96373802 96372919 0.000000e+00 1421.0
16 TraesCS2B01G022000 chr7B 96.032 252 9 1 334 584 537020186 537019935 3.540000e-110 409.0
17 TraesCS2B01G022000 chr7B 97.080 137 4 0 36 172 408946714 408946578 8.220000e-57 231.0
18 TraesCS2B01G022000 chr7B 96.350 137 4 1 36 172 408931803 408931668 1.380000e-54 224.0
19 TraesCS2B01G022000 chr7B 100.000 43 0 0 180 222 96373972 96373930 3.150000e-11 80.5
20 TraesCS2B01G022000 chr7B 100.000 43 0 0 180 222 111966865 111966823 3.150000e-11 80.5
21 TraesCS2B01G022000 chr7B 100.000 43 0 0 180 222 531597427 531597469 3.150000e-11 80.5
22 TraesCS2B01G022000 chr4A 97.095 1928 41 1 1175 3087 678414333 678416260 0.000000e+00 3236.0
23 TraesCS2B01G022000 chr4A 95.866 1911 59 10 1198 3091 153788286 153786379 0.000000e+00 3073.0
24 TraesCS2B01G022000 chr4A 97.994 349 7 0 3458 3806 678416334 678416682 1.170000e-169 606.0
25 TraesCS2B01G022000 chr4A 97.059 34 0 1 594 626 208343 208376 5.310000e-04 56.5
26 TraesCS2B01G022000 chr2A 96.180 1911 52 11 1198 3091 38318429 38316523 0.000000e+00 3105.0
27 TraesCS2B01G022000 chr2A 97.230 1011 21 5 270 1280 622756782 622755779 0.000000e+00 1705.0
28 TraesCS2B01G022000 chr2A 93.120 407 20 7 3254 3655 16726759 16726356 1.180000e-164 590.0
29 TraesCS2B01G022000 chr2A 93.478 138 7 2 921 1056 323524781 323524918 1.790000e-48 204.0
30 TraesCS2B01G022000 chr2A 89.610 154 6 6 3655 3806 16726274 16726129 1.810000e-43 187.0
31 TraesCS2B01G022000 chr1A 95.121 1906 73 6 1198 3087 564326953 564328854 0.000000e+00 2987.0
32 TraesCS2B01G022000 chr2D 94.576 1899 92 7 1193 3090 288991851 288989963 0.000000e+00 2926.0
33 TraesCS2B01G022000 chr2D 92.599 554 27 5 3257 3806 14420442 14419899 0.000000e+00 784.0
34 TraesCS2B01G022000 chr2D 93.766 401 18 5 3257 3655 14626435 14626040 2.530000e-166 595.0
35 TraesCS2B01G022000 chr2D 87.258 361 34 6 3289 3646 14433050 14432699 5.920000e-108 401.0
36 TraesCS2B01G022000 chr2D 85.714 392 43 8 3259 3646 14640097 14639715 5.920000e-108 401.0
37 TraesCS2B01G022000 chr2D 89.610 154 6 2 3655 3806 14625960 14625815 1.810000e-43 187.0
38 TraesCS2B01G022000 chr2D 96.610 59 2 0 3158 3216 135502992 135502934 8.700000e-17 99.0
39 TraesCS2B01G022000 chr7A 92.469 2005 133 9 1094 3089 733096984 733094989 0.000000e+00 2850.0
40 TraesCS2B01G022000 chr7A 92.142 1947 104 7 1193 3091 653424312 653426257 0.000000e+00 2702.0
41 TraesCS2B01G022000 chr7A 92.019 213 16 1 927 1139 453977272 453977483 7.990000e-77 298.0
42 TraesCS2B01G022000 chr7A 84.559 136 7 5 827 948 126688609 126688744 5.160000e-24 122.0
43 TraesCS2B01G022000 chr1B 96.601 1059 14 8 180 1238 466845600 466846636 0.000000e+00 1736.0
44 TraesCS2B01G022000 chr1B 97.983 347 7 0 3460 3806 29771512 29771858 1.510000e-168 603.0
45 TraesCS2B01G022000 chr1B 96.296 81 3 0 3080 3160 610359524 610359604 2.390000e-27 134.0
46 TraesCS2B01G022000 chr1B 80.435 92 6 7 180 268 466845644 466845726 4.110000e-05 60.2
47 TraesCS2B01G022000 chr3A 98.805 753 9 0 180 932 120294618 120293866 0.000000e+00 1341.0
48 TraesCS2B01G022000 chr3A 97.531 81 2 0 3080 3160 450704079 450704159 5.130000e-29 139.0
49 TraesCS2B01G022000 chr3A 87.302 63 5 3 217 276 120294546 120294484 6.820000e-08 69.4
50 TraesCS2B01G022000 chr4B 96.283 538 7 2 324 848 370707802 370708339 0.000000e+00 870.0
51 TraesCS2B01G022000 chr4B 97.674 43 1 0 180 222 370707632 370707674 1.470000e-09 75.0
52 TraesCS2B01G022000 chr6B 98.567 349 5 0 3458 3806 38069131 38068783 5.400000e-173 617.0
53 TraesCS2B01G022000 chr6B 97.436 78 1 1 3083 3160 429706007 429705931 8.580000e-27 132.0
54 TraesCS2B01G022000 chrUn 92.727 220 15 1 921 1139 115892260 115892479 2.210000e-82 316.0
55 TraesCS2B01G022000 chrUn 96.350 137 4 1 36 172 318761089 318760954 1.380000e-54 224.0
56 TraesCS2B01G022000 chrUn 96.350 137 4 1 36 172 319094529 319094394 1.380000e-54 224.0
57 TraesCS2B01G022000 chrUn 96.350 137 4 1 36 172 341655766 341655901 1.380000e-54 224.0
58 TraesCS2B01G022000 chrUn 95.588 136 6 0 38 173 387671287 387671152 6.400000e-53 219.0
59 TraesCS2B01G022000 chr6D 96.774 155 5 0 3084 3238 76078827 76078981 3.770000e-65 259.0
60 TraesCS2B01G022000 chr6D 100.000 32 0 0 3221 3252 76079523 76079554 4.110000e-05 60.2
61 TraesCS2B01G022000 chr3D 96.774 155 5 0 3084 3238 382821820 382821666 3.770000e-65 259.0
62 TraesCS2B01G022000 chr3D 96.774 155 5 0 3084 3238 554660315 554660161 3.770000e-65 259.0
63 TraesCS2B01G022000 chr3D 96.104 77 3 0 3084 3160 17415019 17414943 3.990000e-25 126.0
64 TraesCS2B01G022000 chr3D 100.000 32 0 0 3221 3252 382821124 382821093 4.110000e-05 60.2
65 TraesCS2B01G022000 chr3D 100.000 32 0 0 3221 3252 554659619 554659588 4.110000e-05 60.2
66 TraesCS2B01G022000 chr1D 96.774 155 5 0 3084 3238 207147124 207147278 3.770000e-65 259.0
67 TraesCS2B01G022000 chr1D 100.000 32 0 0 3221 3252 207147820 207147851 4.110000e-05 60.2
68 TraesCS2B01G022000 chr3B 96.454 141 5 0 36 176 68461627 68461767 2.290000e-57 233.0
69 TraesCS2B01G022000 chr3B 96.350 137 5 0 36 172 778244566 778244430 3.830000e-55 226.0
70 TraesCS2B01G022000 chr5A 96.377 138 5 0 36 173 216668906 216669043 1.060000e-55 228.0
71 TraesCS2B01G022000 chr5A 93.151 73 4 1 827 898 452801351 452801423 5.200000e-19 106.0
72 TraesCS2B01G022000 chr7D 96.610 59 2 0 3158 3216 247882 247824 8.700000e-17 99.0
73 TraesCS2B01G022000 chr6A 100.000 32 0 0 3221 3252 98652599 98652630 4.110000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G022000 chr2B 10606685 10610490 3805 False 2389.266667 7029 87.333333 1 3806 3 chr2B.!!$F2 3805
1 TraesCS2B01G022000 chr2B 603638984 603640077 1093 True 674.233333 1882 86.609000 180 1280 3 chr2B.!!$R3 1100
2 TraesCS2B01G022000 chr2B 26317030 26317649 619 True 378.000000 558 91.666500 3264 3806 2 chr2B.!!$R2 542
3 TraesCS2B01G022000 chr7B 111964034 111966865 2831 True 1647.166667 3341 97.145667 180 3082 3 chr7B.!!$R5 2902
4 TraesCS2B01G022000 chr7B 531597427 531600271 2844 False 1643.833333 3284 97.955000 180 3079 3 chr7B.!!$F1 2899
5 TraesCS2B01G022000 chr7B 96371236 96373972 2736 True 1523.833333 3070 97.185000 180 3090 3 chr7B.!!$R4 2910
6 TraesCS2B01G022000 chr4A 153786379 153788286 1907 True 3073.000000 3073 95.866000 1198 3091 1 chr4A.!!$R1 1893
7 TraesCS2B01G022000 chr4A 678414333 678416682 2349 False 1921.000000 3236 97.544500 1175 3806 2 chr4A.!!$F2 2631
8 TraesCS2B01G022000 chr2A 38316523 38318429 1906 True 3105.000000 3105 96.180000 1198 3091 1 chr2A.!!$R1 1893
9 TraesCS2B01G022000 chr2A 622755779 622756782 1003 True 1705.000000 1705 97.230000 270 1280 1 chr2A.!!$R2 1010
10 TraesCS2B01G022000 chr2A 16726129 16726759 630 True 388.500000 590 91.365000 3254 3806 2 chr2A.!!$R3 552
11 TraesCS2B01G022000 chr1A 564326953 564328854 1901 False 2987.000000 2987 95.121000 1198 3087 1 chr1A.!!$F1 1889
12 TraesCS2B01G022000 chr2D 288989963 288991851 1888 True 2926.000000 2926 94.576000 1193 3090 1 chr2D.!!$R5 1897
13 TraesCS2B01G022000 chr2D 14419899 14420442 543 True 784.000000 784 92.599000 3257 3806 1 chr2D.!!$R1 549
14 TraesCS2B01G022000 chr2D 14625815 14626435 620 True 391.000000 595 91.688000 3257 3806 2 chr2D.!!$R6 549
15 TraesCS2B01G022000 chr7A 733094989 733096984 1995 True 2850.000000 2850 92.469000 1094 3089 1 chr7A.!!$R1 1995
16 TraesCS2B01G022000 chr7A 653424312 653426257 1945 False 2702.000000 2702 92.142000 1193 3091 1 chr7A.!!$F3 1898
17 TraesCS2B01G022000 chr1B 466845600 466846636 1036 False 898.100000 1736 88.518000 180 1238 2 chr1B.!!$F3 1058
18 TraesCS2B01G022000 chr3A 120293866 120294618 752 True 705.200000 1341 93.053500 180 932 2 chr3A.!!$R1 752
19 TraesCS2B01G022000 chr4B 370707632 370708339 707 False 472.500000 870 96.978500 180 848 2 chr4B.!!$F1 668

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
84 85 0.107897 TGCACTTGTTCGTGTGGAGT 60.108 50.000 0.0 0.0 37.24 3.85 F
163 164 0.968405 ACGCAAAATCCACTGCCATT 59.032 45.000 0.0 0.0 35.01 3.16 F
164 165 1.344114 ACGCAAAATCCACTGCCATTT 59.656 42.857 0.0 0.0 35.01 2.32 F
165 166 2.560542 ACGCAAAATCCACTGCCATTTA 59.439 40.909 0.0 0.0 35.01 1.40 F
166 167 3.006323 ACGCAAAATCCACTGCCATTTAA 59.994 39.130 0.0 0.0 35.01 1.52 F
1066 1150 2.603075 TTTGAATTGGGTCCCTGGAG 57.397 50.000 10.0 0.0 0.00 3.86 F
1074 1158 0.252742 GGGTCCCTGGAGAGAAGGAA 60.253 60.000 0.0 0.0 36.91 3.36 F
1077 1161 0.793617 TCCCTGGAGAGAAGGAACCT 59.206 55.000 0.0 0.0 36.91 3.50 F
2460 2793 1.039856 GCAGGTCACCCACAAACATT 58.960 50.000 0.0 0.0 0.00 2.71 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1055 1139 0.252742 TTCCTTCTCTCCAGGGACCC 60.253 60.000 0.59 0.59 31.50 4.46 R
1058 1142 0.793617 AGGTTCCTTCTCTCCAGGGA 59.206 55.000 0.00 0.00 31.50 4.20 R
1066 1150 1.072331 TGCCACTTGAGGTTCCTTCTC 59.928 52.381 0.00 0.00 0.00 2.87 R
1067 1151 1.072965 CTGCCACTTGAGGTTCCTTCT 59.927 52.381 0.00 0.00 0.00 2.85 R
1068 1152 1.072331 TCTGCCACTTGAGGTTCCTTC 59.928 52.381 0.00 0.00 0.00 3.46 R
2175 2508 0.323629 TGCACACAGGCCTAGTTACC 59.676 55.000 3.98 0.00 0.00 2.85 R
2460 2793 1.348064 CACCCTGTACCAGTTCCTGA 58.652 55.000 0.00 0.00 32.44 3.86 R
2657 2990 4.587684 CCCTAGTATCAACAACTACCCGAT 59.412 45.833 0.00 0.00 0.00 4.18 R
3347 3826 0.318614 TGCGCTTTTTAAGGCTGCAC 60.319 50.000 9.73 0.00 34.90 4.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.537300 TCTTCCATAACTACTCTGCCATC 57.463 43.478 0.00 0.00 0.00 3.51
23 24 5.211973 TCTTCCATAACTACTCTGCCATCT 58.788 41.667 0.00 0.00 0.00 2.90
24 25 5.303078 TCTTCCATAACTACTCTGCCATCTC 59.697 44.000 0.00 0.00 0.00 2.75
25 26 4.546674 TCCATAACTACTCTGCCATCTCA 58.453 43.478 0.00 0.00 0.00 3.27
26 27 4.586421 TCCATAACTACTCTGCCATCTCAG 59.414 45.833 0.00 0.00 35.46 3.35
27 28 4.343526 CCATAACTACTCTGCCATCTCAGT 59.656 45.833 0.00 0.00 35.63 3.41
28 29 5.163364 CCATAACTACTCTGCCATCTCAGTT 60.163 44.000 0.00 0.00 35.63 3.16
29 30 4.899352 AACTACTCTGCCATCTCAGTTT 57.101 40.909 0.00 0.00 35.63 2.66
30 31 4.899352 ACTACTCTGCCATCTCAGTTTT 57.101 40.909 0.00 0.00 35.63 2.43
31 32 6.360370 AACTACTCTGCCATCTCAGTTTTA 57.640 37.500 0.00 0.00 35.63 1.52
32 33 6.360370 ACTACTCTGCCATCTCAGTTTTAA 57.640 37.500 0.00 0.00 35.63 1.52
33 34 6.769512 ACTACTCTGCCATCTCAGTTTTAAA 58.230 36.000 0.00 0.00 35.63 1.52
34 35 7.224297 ACTACTCTGCCATCTCAGTTTTAAAA 58.776 34.615 0.00 0.00 35.63 1.52
35 36 7.885399 ACTACTCTGCCATCTCAGTTTTAAAAT 59.115 33.333 3.52 0.00 35.63 1.82
36 37 6.917533 ACTCTGCCATCTCAGTTTTAAAATG 58.082 36.000 3.52 0.00 35.63 2.32
37 38 6.071728 ACTCTGCCATCTCAGTTTTAAAATGG 60.072 38.462 3.52 7.67 37.34 3.16
38 39 6.009589 TCTGCCATCTCAGTTTTAAAATGGA 58.990 36.000 16.59 10.76 36.58 3.41
39 40 6.151648 TCTGCCATCTCAGTTTTAAAATGGAG 59.848 38.462 16.59 17.62 36.58 3.86
40 41 5.774690 TGCCATCTCAGTTTTAAAATGGAGT 59.225 36.000 21.40 12.30 36.58 3.85
41 42 6.945435 TGCCATCTCAGTTTTAAAATGGAGTA 59.055 34.615 21.40 13.73 36.58 2.59
42 43 7.450014 TGCCATCTCAGTTTTAAAATGGAGTAA 59.550 33.333 21.40 11.00 36.58 2.24
43 44 8.470002 GCCATCTCAGTTTTAAAATGGAGTAAT 58.530 33.333 21.40 12.20 36.58 1.89
54 55 9.921637 TTTAAAATGGAGTAATTTACAAGCAGG 57.078 29.630 9.15 0.00 0.00 4.85
55 56 7.539034 AAAATGGAGTAATTTACAAGCAGGT 57.461 32.000 9.15 0.00 0.00 4.00
56 57 6.759497 AATGGAGTAATTTACAAGCAGGTC 57.241 37.500 9.15 0.00 0.00 3.85
57 58 5.499004 TGGAGTAATTTACAAGCAGGTCT 57.501 39.130 9.15 0.00 0.00 3.85
58 59 6.614694 TGGAGTAATTTACAAGCAGGTCTA 57.385 37.500 9.15 0.00 0.00 2.59
59 60 6.640518 TGGAGTAATTTACAAGCAGGTCTAG 58.359 40.000 9.15 0.00 0.00 2.43
60 61 6.439375 TGGAGTAATTTACAAGCAGGTCTAGA 59.561 38.462 9.15 0.00 0.00 2.43
61 62 7.038587 TGGAGTAATTTACAAGCAGGTCTAGAA 60.039 37.037 9.15 0.00 0.00 2.10
62 63 7.822822 GGAGTAATTTACAAGCAGGTCTAGAAA 59.177 37.037 9.15 0.00 0.00 2.52
63 64 9.216117 GAGTAATTTACAAGCAGGTCTAGAAAA 57.784 33.333 9.15 0.00 0.00 2.29
64 65 9.569122 AGTAATTTACAAGCAGGTCTAGAAAAA 57.431 29.630 9.15 0.00 0.00 1.94
67 68 4.773323 ACAAGCAGGTCTAGAAAAATGC 57.227 40.909 10.26 10.26 0.00 3.56
68 69 4.144297 ACAAGCAGGTCTAGAAAAATGCA 58.856 39.130 17.12 0.00 36.15 3.96
69 70 4.022849 ACAAGCAGGTCTAGAAAAATGCAC 60.023 41.667 17.12 0.00 36.15 4.57
70 71 4.026356 AGCAGGTCTAGAAAAATGCACT 57.974 40.909 17.12 0.00 36.15 4.40
71 72 4.401925 AGCAGGTCTAGAAAAATGCACTT 58.598 39.130 17.12 0.00 36.15 3.16
72 73 4.217118 AGCAGGTCTAGAAAAATGCACTTG 59.783 41.667 17.12 3.13 36.15 3.16
73 74 4.022849 GCAGGTCTAGAAAAATGCACTTGT 60.023 41.667 12.38 0.00 33.92 3.16
74 75 5.507985 GCAGGTCTAGAAAAATGCACTTGTT 60.508 40.000 12.38 0.00 33.92 2.83
75 76 6.145535 CAGGTCTAGAAAAATGCACTTGTTC 58.854 40.000 0.00 0.00 0.00 3.18
76 77 5.049405 AGGTCTAGAAAAATGCACTTGTTCG 60.049 40.000 0.00 0.00 0.00 3.95
77 78 5.277828 GGTCTAGAAAAATGCACTTGTTCGT 60.278 40.000 0.00 0.00 0.00 3.85
78 79 5.621228 GTCTAGAAAAATGCACTTGTTCGTG 59.379 40.000 0.00 0.00 37.94 4.35
79 80 4.370364 AGAAAAATGCACTTGTTCGTGT 57.630 36.364 0.00 0.00 37.24 4.49
80 81 4.104776 AGAAAAATGCACTTGTTCGTGTG 58.895 39.130 0.00 0.00 37.24 3.82
81 82 2.490328 AAATGCACTTGTTCGTGTGG 57.510 45.000 0.00 0.00 37.24 4.17
82 83 1.674359 AATGCACTTGTTCGTGTGGA 58.326 45.000 0.00 0.00 38.76 4.02
83 84 1.229428 ATGCACTTGTTCGTGTGGAG 58.771 50.000 0.00 0.00 37.89 3.86
84 85 0.107897 TGCACTTGTTCGTGTGGAGT 60.108 50.000 0.00 0.00 37.24 3.85
85 86 1.137282 TGCACTTGTTCGTGTGGAGTA 59.863 47.619 0.00 0.00 37.24 2.59
86 87 2.206750 GCACTTGTTCGTGTGGAGTAA 58.793 47.619 0.00 0.00 37.24 2.24
87 88 2.806244 GCACTTGTTCGTGTGGAGTAAT 59.194 45.455 0.00 0.00 37.24 1.89
88 89 3.250040 GCACTTGTTCGTGTGGAGTAATT 59.750 43.478 0.00 0.00 37.24 1.40
89 90 4.261031 GCACTTGTTCGTGTGGAGTAATTT 60.261 41.667 0.00 0.00 37.24 1.82
90 91 5.049954 GCACTTGTTCGTGTGGAGTAATTTA 60.050 40.000 0.00 0.00 37.24 1.40
91 92 6.360329 CACTTGTTCGTGTGGAGTAATTTAC 58.640 40.000 0.00 0.00 0.00 2.01
92 93 6.018588 CACTTGTTCGTGTGGAGTAATTTACA 60.019 38.462 9.15 0.00 0.00 2.41
93 94 6.539464 ACTTGTTCGTGTGGAGTAATTTACAA 59.461 34.615 9.15 0.00 0.00 2.41
94 95 6.533819 TGTTCGTGTGGAGTAATTTACAAG 57.466 37.500 9.15 0.00 0.00 3.16
95 96 5.049954 TGTTCGTGTGGAGTAATTTACAAGC 60.050 40.000 9.15 0.00 0.00 4.01
96 97 4.633175 TCGTGTGGAGTAATTTACAAGCA 58.367 39.130 9.15 0.48 0.00 3.91
97 98 4.688879 TCGTGTGGAGTAATTTACAAGCAG 59.311 41.667 9.15 0.00 0.00 4.24
98 99 4.142902 CGTGTGGAGTAATTTACAAGCAGG 60.143 45.833 9.15 4.70 0.00 4.85
99 100 4.760204 GTGTGGAGTAATTTACAAGCAGGT 59.240 41.667 9.15 0.00 0.00 4.00
100 101 5.001232 TGTGGAGTAATTTACAAGCAGGTC 58.999 41.667 9.15 0.00 0.00 3.85
101 102 5.221843 TGTGGAGTAATTTACAAGCAGGTCT 60.222 40.000 9.15 0.00 0.00 3.85
102 103 6.014070 TGTGGAGTAATTTACAAGCAGGTCTA 60.014 38.462 9.15 0.00 0.00 2.59
103 104 6.535508 GTGGAGTAATTTACAAGCAGGTCTAG 59.464 42.308 9.15 0.00 0.00 2.43
104 105 6.439375 TGGAGTAATTTACAAGCAGGTCTAGA 59.561 38.462 9.15 0.00 0.00 2.43
105 106 7.038587 TGGAGTAATTTACAAGCAGGTCTAGAA 60.039 37.037 9.15 0.00 0.00 2.10
106 107 7.822822 GGAGTAATTTACAAGCAGGTCTAGAAA 59.177 37.037 9.15 0.00 0.00 2.52
107 108 9.384764 GAGTAATTTACAAGCAGGTCTAGAAAT 57.615 33.333 9.15 0.00 0.00 2.17
110 111 7.772332 ATTTACAAGCAGGTCTAGAAATACG 57.228 36.000 0.00 0.00 0.00 3.06
111 112 3.522553 ACAAGCAGGTCTAGAAATACGC 58.477 45.455 0.00 0.00 0.00 4.42
112 113 2.866762 CAAGCAGGTCTAGAAATACGCC 59.133 50.000 0.00 0.00 0.00 5.68
113 114 2.389715 AGCAGGTCTAGAAATACGCCT 58.610 47.619 0.00 0.00 0.00 5.52
114 115 2.766828 AGCAGGTCTAGAAATACGCCTT 59.233 45.455 0.00 0.00 0.00 4.35
115 116 3.197983 AGCAGGTCTAGAAATACGCCTTT 59.802 43.478 0.00 0.00 0.00 3.11
116 117 3.556365 GCAGGTCTAGAAATACGCCTTTC 59.444 47.826 0.00 2.86 35.74 2.62
117 118 4.680975 GCAGGTCTAGAAATACGCCTTTCT 60.681 45.833 14.84 14.84 45.18 2.52
118 119 5.044558 CAGGTCTAGAAATACGCCTTTCTC 58.955 45.833 14.11 3.53 42.87 2.87
119 120 4.957327 AGGTCTAGAAATACGCCTTTCTCT 59.043 41.667 14.11 5.23 42.87 3.10
120 121 6.039493 CAGGTCTAGAAATACGCCTTTCTCTA 59.961 42.308 14.11 4.11 42.87 2.43
121 122 6.606395 AGGTCTAGAAATACGCCTTTCTCTAA 59.394 38.462 14.11 0.35 42.87 2.10
122 123 6.696583 GGTCTAGAAATACGCCTTTCTCTAAC 59.303 42.308 14.11 11.16 42.87 2.34
123 124 6.414402 GTCTAGAAATACGCCTTTCTCTAACG 59.586 42.308 14.11 0.00 42.87 3.18
124 125 5.069501 AGAAATACGCCTTTCTCTAACGT 57.930 39.130 6.92 0.00 40.59 3.99
125 126 5.100943 AGAAATACGCCTTTCTCTAACGTC 58.899 41.667 6.92 0.00 40.59 4.34
126 127 4.445452 AATACGCCTTTCTCTAACGTCA 57.555 40.909 0.00 0.00 38.12 4.35
127 128 2.061740 ACGCCTTTCTCTAACGTCAC 57.938 50.000 0.00 0.00 29.64 3.67
128 129 1.338973 ACGCCTTTCTCTAACGTCACA 59.661 47.619 0.00 0.00 29.64 3.58
129 130 2.029290 ACGCCTTTCTCTAACGTCACAT 60.029 45.455 0.00 0.00 29.64 3.21
130 131 2.993899 CGCCTTTCTCTAACGTCACATT 59.006 45.455 0.00 0.00 0.00 2.71
131 132 3.181530 CGCCTTTCTCTAACGTCACATTG 60.182 47.826 0.00 0.00 0.00 2.82
132 133 3.424962 GCCTTTCTCTAACGTCACATTGC 60.425 47.826 0.00 0.00 0.00 3.56
133 134 3.997021 CCTTTCTCTAACGTCACATTGCT 59.003 43.478 0.00 0.00 0.00 3.91
134 135 5.168569 CCTTTCTCTAACGTCACATTGCTA 58.831 41.667 0.00 0.00 0.00 3.49
135 136 5.289675 CCTTTCTCTAACGTCACATTGCTAG 59.710 44.000 0.00 0.00 0.00 3.42
136 137 3.770666 TCTCTAACGTCACATTGCTAGC 58.229 45.455 8.10 8.10 0.00 3.42
137 138 3.192633 TCTCTAACGTCACATTGCTAGCA 59.807 43.478 14.93 14.93 0.00 3.49
138 139 4.115516 CTCTAACGTCACATTGCTAGCAT 58.884 43.478 20.13 6.03 0.00 3.79
139 140 5.067283 TCTCTAACGTCACATTGCTAGCATA 59.933 40.000 20.13 10.09 0.00 3.14
140 141 5.281727 TCTAACGTCACATTGCTAGCATAG 58.718 41.667 20.13 16.23 43.09 2.23
141 142 3.801114 ACGTCACATTGCTAGCATAGA 57.199 42.857 20.13 11.19 42.77 1.98
142 143 4.327982 ACGTCACATTGCTAGCATAGAT 57.672 40.909 20.13 6.38 42.77 1.98
143 144 4.697514 ACGTCACATTGCTAGCATAGATT 58.302 39.130 20.13 0.00 42.77 2.40
144 145 5.842907 ACGTCACATTGCTAGCATAGATTA 58.157 37.500 20.13 1.96 42.77 1.75
145 146 5.692204 ACGTCACATTGCTAGCATAGATTAC 59.308 40.000 20.13 11.68 42.77 1.89
146 147 5.164148 CGTCACATTGCTAGCATAGATTACG 60.164 44.000 20.13 18.88 42.77 3.18
147 148 4.686091 TCACATTGCTAGCATAGATTACGC 59.314 41.667 20.13 0.00 42.77 4.42
148 149 4.448732 CACATTGCTAGCATAGATTACGCA 59.551 41.667 20.13 0.00 42.77 5.24
149 150 5.050159 CACATTGCTAGCATAGATTACGCAA 60.050 40.000 20.13 0.00 42.77 4.85
150 151 5.527214 ACATTGCTAGCATAGATTACGCAAA 59.473 36.000 20.13 0.00 42.77 3.68
151 152 6.038161 ACATTGCTAGCATAGATTACGCAAAA 59.962 34.615 20.13 0.00 42.77 2.44
152 153 6.618287 TTGCTAGCATAGATTACGCAAAAT 57.382 33.333 20.13 0.00 42.77 1.82
153 154 6.228273 TGCTAGCATAGATTACGCAAAATC 57.772 37.500 14.93 0.74 42.77 2.17
154 155 5.179368 TGCTAGCATAGATTACGCAAAATCC 59.821 40.000 14.93 0.00 42.77 3.01
155 156 5.179368 GCTAGCATAGATTACGCAAAATCCA 59.821 40.000 10.63 0.00 42.77 3.41
156 157 5.424121 AGCATAGATTACGCAAAATCCAC 57.576 39.130 4.77 0.00 36.68 4.02
157 158 5.126067 AGCATAGATTACGCAAAATCCACT 58.874 37.500 4.77 0.00 36.68 4.00
158 159 5.008019 AGCATAGATTACGCAAAATCCACTG 59.992 40.000 4.77 2.65 36.68 3.66
159 160 3.764885 AGATTACGCAAAATCCACTGC 57.235 42.857 4.77 0.00 36.68 4.40
160 161 2.423538 AGATTACGCAAAATCCACTGCC 59.576 45.455 4.77 0.00 36.68 4.85
161 162 1.610363 TTACGCAAAATCCACTGCCA 58.390 45.000 0.00 0.00 35.01 4.92
162 163 1.832883 TACGCAAAATCCACTGCCAT 58.167 45.000 0.00 0.00 35.01 4.40
163 164 0.968405 ACGCAAAATCCACTGCCATT 59.032 45.000 0.00 0.00 35.01 3.16
164 165 1.344114 ACGCAAAATCCACTGCCATTT 59.656 42.857 0.00 0.00 35.01 2.32
165 166 2.560542 ACGCAAAATCCACTGCCATTTA 59.439 40.909 0.00 0.00 35.01 1.40
166 167 3.006323 ACGCAAAATCCACTGCCATTTAA 59.994 39.130 0.00 0.00 35.01 1.52
167 168 3.993081 CGCAAAATCCACTGCCATTTAAA 59.007 39.130 0.00 0.00 35.01 1.52
168 169 4.450419 CGCAAAATCCACTGCCATTTAAAA 59.550 37.500 0.00 0.00 35.01 1.52
169 170 5.049818 CGCAAAATCCACTGCCATTTAAAAA 60.050 36.000 0.00 0.00 35.01 1.94
292 353 9.515020 TCAACAGTTTTTGAATTACAGTGAATC 57.485 29.630 0.00 0.00 32.42 2.52
745 818 7.837187 GCTCATATATAGAGGTCCTAGGAACTT 59.163 40.741 30.12 20.64 43.05 2.66
746 819 9.403583 CTCATATATAGAGGTCCTAGGAACTTC 57.596 40.741 30.12 21.38 43.05 3.01
1045 1129 6.152831 TCAAGAGGAAGACGATGAAGACATTA 59.847 38.462 0.00 0.00 36.82 1.90
1046 1130 6.531503 AGAGGAAGACGATGAAGACATTAA 57.468 37.500 0.00 0.00 36.82 1.40
1047 1131 7.118496 AGAGGAAGACGATGAAGACATTAAT 57.882 36.000 0.00 0.00 36.82 1.40
1048 1132 7.560368 AGAGGAAGACGATGAAGACATTAATT 58.440 34.615 0.00 0.00 36.82 1.40
1049 1133 8.043710 AGAGGAAGACGATGAAGACATTAATTT 58.956 33.333 0.00 0.00 36.82 1.82
1050 1134 7.978982 AGGAAGACGATGAAGACATTAATTTG 58.021 34.615 0.00 0.00 36.82 2.32
1051 1135 7.824289 AGGAAGACGATGAAGACATTAATTTGA 59.176 33.333 0.00 0.00 36.82 2.69
1052 1136 8.450964 GGAAGACGATGAAGACATTAATTTGAA 58.549 33.333 0.00 0.00 36.82 2.69
1053 1137 9.994432 GAAGACGATGAAGACATTAATTTGAAT 57.006 29.630 0.00 0.00 36.82 2.57
1055 1139 9.778993 AGACGATGAAGACATTAATTTGAATTG 57.221 29.630 0.00 0.00 36.82 2.32
1056 1140 8.915871 ACGATGAAGACATTAATTTGAATTGG 57.084 30.769 0.00 0.00 36.82 3.16
1057 1141 7.975616 ACGATGAAGACATTAATTTGAATTGGG 59.024 33.333 0.00 0.00 36.82 4.12
1058 1142 7.975616 CGATGAAGACATTAATTTGAATTGGGT 59.024 33.333 0.00 0.00 36.82 4.51
1059 1143 9.305925 GATGAAGACATTAATTTGAATTGGGTC 57.694 33.333 0.00 4.68 36.82 4.46
1060 1144 7.610865 TGAAGACATTAATTTGAATTGGGTCC 58.389 34.615 0.00 0.00 30.85 4.46
1061 1145 6.544928 AGACATTAATTTGAATTGGGTCCC 57.455 37.500 0.00 0.00 30.85 4.46
1062 1146 6.263754 AGACATTAATTTGAATTGGGTCCCT 58.736 36.000 10.00 0.00 30.85 4.20
1063 1147 6.155049 AGACATTAATTTGAATTGGGTCCCTG 59.845 38.462 10.00 0.00 30.85 4.45
1064 1148 5.189539 ACATTAATTTGAATTGGGTCCCTGG 59.810 40.000 10.00 0.00 0.00 4.45
1065 1149 3.558608 AATTTGAATTGGGTCCCTGGA 57.441 42.857 10.00 0.00 0.00 3.86
1066 1150 2.603075 TTTGAATTGGGTCCCTGGAG 57.397 50.000 10.00 0.00 0.00 3.86
1067 1151 1.753903 TTGAATTGGGTCCCTGGAGA 58.246 50.000 10.00 0.00 0.00 3.71
1068 1152 1.289160 TGAATTGGGTCCCTGGAGAG 58.711 55.000 10.00 0.00 0.00 3.20
1069 1153 1.203428 TGAATTGGGTCCCTGGAGAGA 60.203 52.381 10.00 0.00 0.00 3.10
1070 1154 1.916181 GAATTGGGTCCCTGGAGAGAA 59.084 52.381 10.00 0.00 0.00 2.87
1071 1155 1.589414 ATTGGGTCCCTGGAGAGAAG 58.411 55.000 10.00 0.00 0.00 2.85
1072 1156 0.547712 TTGGGTCCCTGGAGAGAAGG 60.548 60.000 10.00 0.00 34.31 3.46
1073 1157 1.392534 GGGTCCCTGGAGAGAAGGA 59.607 63.158 0.00 0.00 36.91 3.36
1074 1158 0.252742 GGGTCCCTGGAGAGAAGGAA 60.253 60.000 0.00 0.00 36.91 3.36
1075 1159 0.906066 GGTCCCTGGAGAGAAGGAAC 59.094 60.000 0.00 0.00 36.91 3.62
1076 1160 0.906066 GTCCCTGGAGAGAAGGAACC 59.094 60.000 0.00 0.00 36.91 3.62
1077 1161 0.793617 TCCCTGGAGAGAAGGAACCT 59.206 55.000 0.00 0.00 36.91 3.50
1078 1162 1.199615 CCCTGGAGAGAAGGAACCTC 58.800 60.000 0.00 0.00 36.91 3.85
1079 1163 1.553417 CCCTGGAGAGAAGGAACCTCA 60.553 57.143 0.00 0.00 36.91 3.86
1080 1164 2.260822 CCTGGAGAGAAGGAACCTCAA 58.739 52.381 0.00 0.00 36.91 3.02
1081 1165 2.235898 CCTGGAGAGAAGGAACCTCAAG 59.764 54.545 0.00 0.00 36.91 3.02
1082 1166 2.903135 CTGGAGAGAAGGAACCTCAAGT 59.097 50.000 0.00 0.00 33.25 3.16
1083 1167 2.634940 TGGAGAGAAGGAACCTCAAGTG 59.365 50.000 0.00 0.00 33.25 3.16
1084 1168 2.027653 GGAGAGAAGGAACCTCAAGTGG 60.028 54.545 0.00 0.00 33.25 4.00
1085 1169 1.349357 AGAGAAGGAACCTCAAGTGGC 59.651 52.381 0.00 0.00 33.25 5.01
1086 1170 1.072331 GAGAAGGAACCTCAAGTGGCA 59.928 52.381 0.00 0.00 0.00 4.92
1087 1171 1.072965 AGAAGGAACCTCAAGTGGCAG 59.927 52.381 0.00 0.00 0.00 4.85
1088 1172 1.072331 GAAGGAACCTCAAGTGGCAGA 59.928 52.381 0.00 0.00 0.00 4.26
1089 1173 1.140312 AGGAACCTCAAGTGGCAGAA 58.860 50.000 0.00 0.00 0.00 3.02
1090 1174 1.494721 AGGAACCTCAAGTGGCAGAAA 59.505 47.619 0.00 0.00 0.00 2.52
1091 1175 2.091885 AGGAACCTCAAGTGGCAGAAAA 60.092 45.455 0.00 0.00 0.00 2.29
1092 1176 2.893489 GGAACCTCAAGTGGCAGAAAAT 59.107 45.455 0.00 0.00 0.00 1.82
1093 1177 3.305608 GGAACCTCAAGTGGCAGAAAATG 60.306 47.826 0.00 0.00 0.00 2.32
1094 1178 2.242043 ACCTCAAGTGGCAGAAAATGG 58.758 47.619 0.00 0.00 0.00 3.16
1095 1179 2.158475 ACCTCAAGTGGCAGAAAATGGA 60.158 45.455 0.00 0.00 0.00 3.41
1096 1180 2.490903 CCTCAAGTGGCAGAAAATGGAG 59.509 50.000 0.00 0.00 0.00 3.86
1097 1181 3.415212 CTCAAGTGGCAGAAAATGGAGA 58.585 45.455 0.00 0.00 0.00 3.71
1098 1182 4.015084 CTCAAGTGGCAGAAAATGGAGAT 58.985 43.478 0.00 0.00 0.00 2.75
1099 1183 5.178096 TCAAGTGGCAGAAAATGGAGATA 57.822 39.130 0.00 0.00 0.00 1.98
1100 1184 4.943705 TCAAGTGGCAGAAAATGGAGATAC 59.056 41.667 0.00 0.00 0.00 2.24
1395 1728 6.883744 AGAGGAAGAGGATGAAGTTATGAAC 58.116 40.000 0.00 0.00 0.00 3.18
1443 1776 6.112058 AGAATTGTCAGATAAGAAGAGGCAC 58.888 40.000 0.00 0.00 0.00 5.01
1746 2079 1.342174 GCCCGATCGACCCTACATAAA 59.658 52.381 18.66 0.00 0.00 1.40
1756 2089 3.945921 GACCCTACATAAAAGGTTCCAGC 59.054 47.826 0.00 0.00 31.10 4.85
1846 2179 8.183536 CGAGATTGAAATTTTGTATGTCCATGA 58.816 33.333 0.00 0.00 0.00 3.07
1889 2222 3.930848 ACTTCTCGGGCTATGTTTAAACG 59.069 43.478 13.45 0.95 0.00 3.60
2175 2508 5.883661 ACAAAAGTGTTGACATCAGTGAAG 58.116 37.500 0.00 0.00 32.58 3.02
2451 2784 1.823169 TAACCGACTGCAGGTCACCC 61.823 60.000 19.93 0.00 44.70 4.61
2460 2793 1.039856 GCAGGTCACCCACAAACATT 58.960 50.000 0.00 0.00 0.00 2.71
2657 2990 7.254761 GGAAATCATCAGTGTATATTGCGACAA 60.255 37.037 0.00 0.00 0.00 3.18
3095 3572 8.478775 AGTTATTTGAATTAATTAGGAGGCCC 57.521 34.615 0.00 0.00 0.00 5.80
3096 3573 8.065007 AGTTATTTGAATTAATTAGGAGGCCCA 58.935 33.333 0.00 0.00 33.88 5.36
3097 3574 6.731292 ATTTGAATTAATTAGGAGGCCCAC 57.269 37.500 0.00 0.00 33.88 4.61
3098 3575 4.871871 TGAATTAATTAGGAGGCCCACA 57.128 40.909 0.00 0.00 33.88 4.17
3099 3576 4.532834 TGAATTAATTAGGAGGCCCACAC 58.467 43.478 0.00 0.00 33.88 3.82
3101 3578 5.430417 TGAATTAATTAGGAGGCCCACACTA 59.570 40.000 0.00 0.00 33.88 2.74
3102 3579 4.765813 TTAATTAGGAGGCCCACACTAC 57.234 45.455 0.00 0.00 33.88 2.73
3103 3580 2.570386 ATTAGGAGGCCCACACTACT 57.430 50.000 0.00 0.00 32.77 2.57
3104 3581 3.700863 ATTAGGAGGCCCACACTACTA 57.299 47.619 0.00 0.00 30.16 1.82
3106 3583 2.089600 AGGAGGCCCACACTACTATC 57.910 55.000 0.00 0.00 33.88 2.08
3108 3585 1.413227 GGAGGCCCACACTACTATCCT 60.413 57.143 0.00 0.00 0.00 3.24
3109 3586 1.689273 GAGGCCCACACTACTATCCTG 59.311 57.143 0.00 0.00 0.00 3.86
3110 3587 0.759346 GGCCCACACTACTATCCTGG 59.241 60.000 0.00 0.00 0.00 4.45
3111 3588 1.691482 GGCCCACACTACTATCCTGGA 60.691 57.143 0.00 0.00 0.00 3.86
3112 3589 2.116238 GCCCACACTACTATCCTGGAA 58.884 52.381 0.00 0.00 0.00 3.53
3113 3590 2.103263 GCCCACACTACTATCCTGGAAG 59.897 54.545 0.00 2.44 0.00 3.46
3114 3591 3.643237 CCCACACTACTATCCTGGAAGA 58.357 50.000 0.00 0.00 34.07 2.87
3115 3592 4.227197 CCCACACTACTATCCTGGAAGAT 58.773 47.826 0.00 0.00 34.07 2.40
3116 3593 4.039730 CCCACACTACTATCCTGGAAGATG 59.960 50.000 0.00 4.76 34.07 2.90
3117 3594 4.502259 CCACACTACTATCCTGGAAGATGC 60.502 50.000 0.00 0.00 34.07 3.91
3118 3595 4.100035 CACACTACTATCCTGGAAGATGCA 59.900 45.833 0.00 0.00 34.07 3.96
3119 3596 4.343526 ACACTACTATCCTGGAAGATGCAG 59.656 45.833 0.00 0.00 35.43 4.41
3120 3597 2.926778 ACTATCCTGGAAGATGCAGC 57.073 50.000 0.00 0.00 34.22 5.25
3121 3598 2.406559 ACTATCCTGGAAGATGCAGCT 58.593 47.619 0.00 0.00 34.22 4.24
3122 3599 3.581101 ACTATCCTGGAAGATGCAGCTA 58.419 45.455 4.15 0.00 34.22 3.32
3123 3600 4.166539 ACTATCCTGGAAGATGCAGCTAT 58.833 43.478 4.15 0.00 34.22 2.97
3124 3601 4.596643 ACTATCCTGGAAGATGCAGCTATT 59.403 41.667 4.15 0.00 34.22 1.73
3125 3602 5.782331 ACTATCCTGGAAGATGCAGCTATTA 59.218 40.000 4.15 0.00 34.22 0.98
3126 3603 4.342862 TCCTGGAAGATGCAGCTATTAC 57.657 45.455 4.15 0.00 34.22 1.89
3127 3604 3.969976 TCCTGGAAGATGCAGCTATTACT 59.030 43.478 4.15 0.00 34.22 2.24
3128 3605 4.039730 TCCTGGAAGATGCAGCTATTACTC 59.960 45.833 4.15 0.00 34.22 2.59
3129 3606 4.202295 CCTGGAAGATGCAGCTATTACTCA 60.202 45.833 4.15 0.00 34.22 3.41
3130 3607 5.512749 CCTGGAAGATGCAGCTATTACTCAT 60.513 44.000 4.15 0.00 34.22 2.90
3131 3608 5.933617 TGGAAGATGCAGCTATTACTCATT 58.066 37.500 4.15 0.00 0.00 2.57
3132 3609 6.359804 TGGAAGATGCAGCTATTACTCATTT 58.640 36.000 4.15 0.00 0.00 2.32
3133 3610 6.484643 TGGAAGATGCAGCTATTACTCATTTC 59.515 38.462 4.15 0.00 0.00 2.17
3134 3611 6.484643 GGAAGATGCAGCTATTACTCATTTCA 59.515 38.462 4.15 0.00 0.00 2.69
3135 3612 6.857777 AGATGCAGCTATTACTCATTTCAC 57.142 37.500 0.55 0.00 0.00 3.18
3136 3613 6.351711 AGATGCAGCTATTACTCATTTCACA 58.648 36.000 0.55 0.00 0.00 3.58
3137 3614 6.825213 AGATGCAGCTATTACTCATTTCACAA 59.175 34.615 0.55 0.00 0.00 3.33
3138 3615 7.501559 AGATGCAGCTATTACTCATTTCACAAT 59.498 33.333 0.55 0.00 0.00 2.71
3139 3616 8.681486 ATGCAGCTATTACTCATTTCACAATA 57.319 30.769 0.00 0.00 0.00 1.90
3140 3617 8.146479 TGCAGCTATTACTCATTTCACAATAG 57.854 34.615 0.00 0.00 34.01 1.73
3141 3618 7.227314 TGCAGCTATTACTCATTTCACAATAGG 59.773 37.037 0.00 0.00 32.34 2.57
3142 3619 7.227512 GCAGCTATTACTCATTTCACAATAGGT 59.772 37.037 0.00 0.00 39.32 3.08
3143 3620 9.113838 CAGCTATTACTCATTTCACAATAGGTT 57.886 33.333 0.00 0.00 37.65 3.50
3144 3621 9.113838 AGCTATTACTCATTTCACAATAGGTTG 57.886 33.333 0.00 0.00 36.85 3.77
3145 3622 9.109393 GCTATTACTCATTTCACAATAGGTTGA 57.891 33.333 0.00 0.00 38.71 3.18
3147 3624 8.862325 ATTACTCATTTCACAATAGGTTGACA 57.138 30.769 0.00 0.00 38.71 3.58
3148 3625 8.684386 TTACTCATTTCACAATAGGTTGACAA 57.316 30.769 0.00 0.00 38.71 3.18
3149 3626 7.765695 ACTCATTTCACAATAGGTTGACAAT 57.234 32.000 0.00 0.00 38.71 2.71
3150 3627 8.862325 ACTCATTTCACAATAGGTTGACAATA 57.138 30.769 0.00 0.00 38.71 1.90
3151 3628 9.466497 ACTCATTTCACAATAGGTTGACAATAT 57.534 29.630 0.00 0.00 38.71 1.28
3152 3629 9.726232 CTCATTTCACAATAGGTTGACAATATG 57.274 33.333 0.00 0.00 38.71 1.78
3153 3630 8.190122 TCATTTCACAATAGGTTGACAATATGC 58.810 33.333 0.00 0.00 38.71 3.14
3154 3631 7.459795 TTTCACAATAGGTTGACAATATGCA 57.540 32.000 0.00 0.00 38.71 3.96
3155 3632 7.459795 TTCACAATAGGTTGACAATATGCAA 57.540 32.000 0.00 0.00 38.71 4.08
3156 3633 7.459795 TCACAATAGGTTGACAATATGCAAA 57.540 32.000 0.00 0.00 38.71 3.68
3157 3634 8.065473 TCACAATAGGTTGACAATATGCAAAT 57.935 30.769 0.00 0.00 38.71 2.32
3158 3635 7.975058 TCACAATAGGTTGACAATATGCAAATG 59.025 33.333 0.00 0.00 38.71 2.32
3159 3636 7.975058 CACAATAGGTTGACAATATGCAAATGA 59.025 33.333 0.00 0.00 38.71 2.57
3160 3637 8.530311 ACAATAGGTTGACAATATGCAAATGAA 58.470 29.630 0.00 0.00 38.71 2.57
3161 3638 8.810427 CAATAGGTTGACAATATGCAAATGAAC 58.190 33.333 0.00 0.00 37.53 3.18
3162 3639 6.343716 AGGTTGACAATATGCAAATGAACA 57.656 33.333 0.00 0.00 0.00 3.18
3163 3640 6.392354 AGGTTGACAATATGCAAATGAACAG 58.608 36.000 0.00 0.00 0.00 3.16
3164 3641 6.015180 AGGTTGACAATATGCAAATGAACAGT 60.015 34.615 0.00 0.00 0.00 3.55
3165 3642 6.646240 GGTTGACAATATGCAAATGAACAGTT 59.354 34.615 0.00 0.00 0.00 3.16
3166 3643 7.148755 GGTTGACAATATGCAAATGAACAGTTC 60.149 37.037 6.32 6.32 0.00 3.01
3167 3644 7.218228 TGACAATATGCAAATGAACAGTTCT 57.782 32.000 14.51 0.00 0.00 3.01
3168 3645 7.085746 TGACAATATGCAAATGAACAGTTCTG 58.914 34.615 14.51 5.83 0.00 3.02
3169 3646 6.985117 ACAATATGCAAATGAACAGTTCTGT 58.015 32.000 14.51 3.62 0.00 3.41
3170 3647 6.864685 ACAATATGCAAATGAACAGTTCTGTG 59.135 34.615 14.51 10.14 0.00 3.66
3171 3648 4.924305 ATGCAAATGAACAGTTCTGTGT 57.076 36.364 14.51 0.00 0.00 3.72
3172 3649 4.717233 TGCAAATGAACAGTTCTGTGTT 57.283 36.364 14.51 0.00 43.49 3.32
3173 3650 5.826601 TGCAAATGAACAGTTCTGTGTTA 57.173 34.783 14.51 0.00 40.83 2.41
3174 3651 6.389830 TGCAAATGAACAGTTCTGTGTTAT 57.610 33.333 14.51 0.00 40.83 1.89
3175 3652 6.437928 TGCAAATGAACAGTTCTGTGTTATC 58.562 36.000 14.51 1.46 40.83 1.75
3176 3653 6.262944 TGCAAATGAACAGTTCTGTGTTATCT 59.737 34.615 14.51 0.00 40.83 1.98
3177 3654 7.141363 GCAAATGAACAGTTCTGTGTTATCTT 58.859 34.615 14.51 0.00 40.83 2.40
3178 3655 7.649306 GCAAATGAACAGTTCTGTGTTATCTTT 59.351 33.333 14.51 2.88 40.83 2.52
3179 3656 9.173939 CAAATGAACAGTTCTGTGTTATCTTTC 57.826 33.333 14.51 0.00 40.83 2.62
3180 3657 8.450578 AATGAACAGTTCTGTGTTATCTTTCA 57.549 30.769 14.51 4.56 40.83 2.69
3181 3658 7.482654 TGAACAGTTCTGTGTTATCTTTCAG 57.517 36.000 14.51 0.00 40.83 3.02
3182 3659 6.483307 TGAACAGTTCTGTGTTATCTTTCAGG 59.517 38.462 14.51 0.00 40.83 3.86
3183 3660 5.930135 ACAGTTCTGTGTTATCTTTCAGGT 58.070 37.500 4.58 0.00 0.00 4.00
3184 3661 7.062749 ACAGTTCTGTGTTATCTTTCAGGTA 57.937 36.000 4.58 0.00 0.00 3.08
3185 3662 7.506114 ACAGTTCTGTGTTATCTTTCAGGTAA 58.494 34.615 4.58 0.00 0.00 2.85
3186 3663 8.157476 ACAGTTCTGTGTTATCTTTCAGGTAAT 58.843 33.333 4.58 0.00 0.00 1.89
3187 3664 9.653287 CAGTTCTGTGTTATCTTTCAGGTAATA 57.347 33.333 0.00 0.00 0.00 0.98
3193 3670 9.787435 TGTGTTATCTTTCAGGTAATAAACAGT 57.213 29.630 0.00 0.00 0.00 3.55
3198 3675 7.739498 TCTTTCAGGTAATAAACAGTTGTCC 57.261 36.000 0.00 0.00 0.00 4.02
3199 3676 7.514721 TCTTTCAGGTAATAAACAGTTGTCCT 58.485 34.615 0.00 0.00 0.00 3.85
3200 3677 7.660208 TCTTTCAGGTAATAAACAGTTGTCCTC 59.340 37.037 0.00 0.00 0.00 3.71
3201 3678 6.428083 TCAGGTAATAAACAGTTGTCCTCA 57.572 37.500 0.00 0.00 0.00 3.86
3202 3679 6.464222 TCAGGTAATAAACAGTTGTCCTCAG 58.536 40.000 0.00 0.00 0.00 3.35
3203 3680 6.269077 TCAGGTAATAAACAGTTGTCCTCAGA 59.731 38.462 0.00 0.00 0.00 3.27
3204 3681 6.934645 CAGGTAATAAACAGTTGTCCTCAGAA 59.065 38.462 0.00 0.00 0.00 3.02
3205 3682 7.444183 CAGGTAATAAACAGTTGTCCTCAGAAA 59.556 37.037 0.00 0.00 0.00 2.52
3206 3683 7.444487 AGGTAATAAACAGTTGTCCTCAGAAAC 59.556 37.037 0.00 0.00 0.00 2.78
3207 3684 7.227910 GGTAATAAACAGTTGTCCTCAGAAACA 59.772 37.037 0.00 0.00 0.00 2.83
3208 3685 7.639113 AATAAACAGTTGTCCTCAGAAACAA 57.361 32.000 0.00 0.00 33.18 2.83
3213 3690 2.708216 TGTCCTCAGAAACAACTGCA 57.292 45.000 0.00 0.00 37.75 4.41
3214 3691 2.288666 TGTCCTCAGAAACAACTGCAC 58.711 47.619 0.00 0.00 37.75 4.57
3215 3692 2.288666 GTCCTCAGAAACAACTGCACA 58.711 47.619 0.00 0.00 37.75 4.57
3216 3693 2.682856 GTCCTCAGAAACAACTGCACAA 59.317 45.455 0.00 0.00 37.75 3.33
3217 3694 2.945008 TCCTCAGAAACAACTGCACAAG 59.055 45.455 0.00 0.00 37.75 3.16
3218 3695 2.033801 CCTCAGAAACAACTGCACAAGG 59.966 50.000 0.00 0.00 37.75 3.61
3219 3696 1.405105 TCAGAAACAACTGCACAAGGC 59.595 47.619 0.00 0.00 45.13 4.35
3230 3707 1.787012 GCACAAGGCATTTTGTCAGG 58.213 50.000 0.00 0.00 43.97 3.86
3231 3708 1.069049 GCACAAGGCATTTTGTCAGGT 59.931 47.619 0.00 0.00 43.97 4.00
3232 3709 2.483538 GCACAAGGCATTTTGTCAGGTT 60.484 45.455 0.00 0.00 43.97 3.50
3233 3710 3.125316 CACAAGGCATTTTGTCAGGTTG 58.875 45.455 0.00 0.00 39.17 3.77
3234 3711 2.765699 ACAAGGCATTTTGTCAGGTTGT 59.234 40.909 0.00 0.00 36.60 3.32
3235 3712 3.197549 ACAAGGCATTTTGTCAGGTTGTT 59.802 39.130 0.00 0.00 36.60 2.83
3236 3713 3.457610 AGGCATTTTGTCAGGTTGTTG 57.542 42.857 0.00 0.00 0.00 3.33
3237 3714 2.765699 AGGCATTTTGTCAGGTTGTTGT 59.234 40.909 0.00 0.00 0.00 3.32
3238 3715 3.957497 AGGCATTTTGTCAGGTTGTTGTA 59.043 39.130 0.00 0.00 0.00 2.41
3239 3716 4.404073 AGGCATTTTGTCAGGTTGTTGTAA 59.596 37.500 0.00 0.00 0.00 2.41
3240 3717 4.506288 GGCATTTTGTCAGGTTGTTGTAAC 59.494 41.667 0.00 0.00 0.00 2.50
3241 3718 5.105752 GCATTTTGTCAGGTTGTTGTAACA 58.894 37.500 0.00 0.00 37.08 2.41
3242 3719 5.752955 GCATTTTGTCAGGTTGTTGTAACAT 59.247 36.000 0.00 0.00 38.95 2.71
3243 3720 6.920758 GCATTTTGTCAGGTTGTTGTAACATA 59.079 34.615 0.00 0.00 38.95 2.29
3244 3721 7.114811 GCATTTTGTCAGGTTGTTGTAACATAG 59.885 37.037 0.00 0.00 38.95 2.23
3245 3722 5.682943 TTGTCAGGTTGTTGTAACATAGC 57.317 39.130 0.00 0.84 38.95 2.97
3246 3723 4.968259 TGTCAGGTTGTTGTAACATAGCT 58.032 39.130 0.00 0.00 38.95 3.32
3247 3724 6.104146 TGTCAGGTTGTTGTAACATAGCTA 57.896 37.500 0.00 0.00 38.95 3.32
3248 3725 6.163476 TGTCAGGTTGTTGTAACATAGCTAG 58.837 40.000 0.00 0.00 38.95 3.42
3249 3726 6.164176 GTCAGGTTGTTGTAACATAGCTAGT 58.836 40.000 0.00 0.00 38.95 2.57
3250 3727 6.649557 GTCAGGTTGTTGTAACATAGCTAGTT 59.350 38.462 0.00 6.69 38.95 2.24
3251 3728 6.872020 TCAGGTTGTTGTAACATAGCTAGTTC 59.128 38.462 10.58 5.70 38.95 3.01
3252 3729 6.874134 CAGGTTGTTGTAACATAGCTAGTTCT 59.126 38.462 10.58 0.42 38.95 3.01
3253 3730 6.874134 AGGTTGTTGTAACATAGCTAGTTCTG 59.126 38.462 10.58 1.88 38.95 3.02
3254 3731 6.649557 GGTTGTTGTAACATAGCTAGTTCTGT 59.350 38.462 10.58 2.46 38.95 3.41
3255 3732 7.816031 GGTTGTTGTAACATAGCTAGTTCTGTA 59.184 37.037 10.58 0.00 38.95 2.74
3347 3826 3.868757 TTCACTCGGGTTCATACAGAG 57.131 47.619 0.00 0.00 36.93 3.35
3364 3843 1.537202 AGAGTGCAGCCTTAAAAAGCG 59.463 47.619 0.00 0.00 0.00 4.68
3405 3884 1.941294 GAGCACATTCTCAGATGGCAG 59.059 52.381 0.00 0.00 33.41 4.85
3407 3886 2.172930 AGCACATTCTCAGATGGCAGAT 59.827 45.455 0.00 0.00 0.00 2.90
3543 4042 1.955778 CTTGCTTGTCATGACCAACCA 59.044 47.619 22.85 11.63 0.00 3.67
3797 4385 7.370383 TGCAATAAAAAGAGAATCAGGAACAC 58.630 34.615 0.00 0.00 37.82 3.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.211973 AGATGGCAGAGTAGTTATGGAAGA 58.788 41.667 0.00 0.00 0.00 2.87
4 5 4.343526 ACTGAGATGGCAGAGTAGTTATGG 59.656 45.833 0.00 0.00 39.20 2.74
7 8 6.360370 AAAACTGAGATGGCAGAGTAGTTA 57.640 37.500 9.42 0.00 39.20 2.24
8 9 4.899352 AAACTGAGATGGCAGAGTAGTT 57.101 40.909 0.00 0.00 39.20 2.24
9 10 4.899352 AAAACTGAGATGGCAGAGTAGT 57.101 40.909 0.00 0.00 39.20 2.73
10 11 7.672983 TTTTAAAACTGAGATGGCAGAGTAG 57.327 36.000 0.00 0.00 39.20 2.57
11 12 7.121168 CCATTTTAAAACTGAGATGGCAGAGTA 59.879 37.037 1.97 0.00 39.20 2.59
12 13 6.071728 CCATTTTAAAACTGAGATGGCAGAGT 60.072 38.462 1.97 0.00 39.20 3.24
13 14 6.151648 TCCATTTTAAAACTGAGATGGCAGAG 59.848 38.462 1.97 0.00 39.20 3.35
14 15 6.009589 TCCATTTTAAAACTGAGATGGCAGA 58.990 36.000 1.97 0.00 39.20 4.26
15 16 6.071728 ACTCCATTTTAAAACTGAGATGGCAG 60.072 38.462 24.58 17.11 41.63 4.85
16 17 5.774690 ACTCCATTTTAAAACTGAGATGGCA 59.225 36.000 24.58 0.00 35.23 4.92
17 18 6.272822 ACTCCATTTTAAAACTGAGATGGC 57.727 37.500 24.58 0.00 35.23 4.40
28 29 9.921637 CCTGCTTGTAAATTACTCCATTTTAAA 57.078 29.630 4.67 0.00 0.00 1.52
29 30 9.084533 ACCTGCTTGTAAATTACTCCATTTTAA 57.915 29.630 4.67 0.00 0.00 1.52
30 31 8.644374 ACCTGCTTGTAAATTACTCCATTTTA 57.356 30.769 4.67 0.00 0.00 1.52
31 32 7.451566 AGACCTGCTTGTAAATTACTCCATTTT 59.548 33.333 4.67 0.00 0.00 1.82
32 33 6.948309 AGACCTGCTTGTAAATTACTCCATTT 59.052 34.615 4.67 0.00 0.00 2.32
33 34 6.485171 AGACCTGCTTGTAAATTACTCCATT 58.515 36.000 4.67 0.00 0.00 3.16
34 35 6.067217 AGACCTGCTTGTAAATTACTCCAT 57.933 37.500 4.67 0.00 0.00 3.41
35 36 5.499004 AGACCTGCTTGTAAATTACTCCA 57.501 39.130 4.67 0.00 0.00 3.86
36 37 6.875076 TCTAGACCTGCTTGTAAATTACTCC 58.125 40.000 4.67 0.00 0.00 3.85
37 38 8.773404 TTTCTAGACCTGCTTGTAAATTACTC 57.227 34.615 4.67 0.00 0.00 2.59
38 39 9.569122 TTTTTCTAGACCTGCTTGTAAATTACT 57.431 29.630 4.67 0.00 0.00 2.24
41 42 7.814587 GCATTTTTCTAGACCTGCTTGTAAATT 59.185 33.333 0.00 0.00 0.00 1.82
42 43 7.039784 TGCATTTTTCTAGACCTGCTTGTAAAT 60.040 33.333 13.19 0.00 0.00 1.40
43 44 6.264292 TGCATTTTTCTAGACCTGCTTGTAAA 59.736 34.615 13.19 0.00 0.00 2.01
44 45 5.767665 TGCATTTTTCTAGACCTGCTTGTAA 59.232 36.000 13.19 0.00 0.00 2.41
45 46 5.181245 GTGCATTTTTCTAGACCTGCTTGTA 59.819 40.000 13.19 0.00 0.00 2.41
46 47 4.022849 GTGCATTTTTCTAGACCTGCTTGT 60.023 41.667 13.19 0.00 0.00 3.16
47 48 4.217118 AGTGCATTTTTCTAGACCTGCTTG 59.783 41.667 13.19 1.27 0.00 4.01
48 49 4.401925 AGTGCATTTTTCTAGACCTGCTT 58.598 39.130 13.19 3.36 0.00 3.91
49 50 4.026356 AGTGCATTTTTCTAGACCTGCT 57.974 40.909 13.19 0.00 0.00 4.24
50 51 4.022849 ACAAGTGCATTTTTCTAGACCTGC 60.023 41.667 0.00 0.00 0.00 4.85
51 52 5.695851 ACAAGTGCATTTTTCTAGACCTG 57.304 39.130 0.00 0.00 0.00 4.00
52 53 5.049405 CGAACAAGTGCATTTTTCTAGACCT 60.049 40.000 0.00 0.00 0.00 3.85
53 54 5.147162 CGAACAAGTGCATTTTTCTAGACC 58.853 41.667 0.00 0.00 0.00 3.85
54 55 5.621228 CACGAACAAGTGCATTTTTCTAGAC 59.379 40.000 0.00 0.00 35.17 2.59
55 56 5.295787 ACACGAACAAGTGCATTTTTCTAGA 59.704 36.000 0.00 0.00 45.45 2.43
56 57 5.396362 CACACGAACAAGTGCATTTTTCTAG 59.604 40.000 0.00 0.00 45.45 2.43
57 58 5.270083 CACACGAACAAGTGCATTTTTCTA 58.730 37.500 0.00 0.00 45.45 2.10
58 59 4.104776 CACACGAACAAGTGCATTTTTCT 58.895 39.130 0.00 0.00 45.45 2.52
59 60 3.242712 CCACACGAACAAGTGCATTTTTC 59.757 43.478 0.00 0.00 45.45 2.29
60 61 3.119316 TCCACACGAACAAGTGCATTTTT 60.119 39.130 0.00 0.00 45.45 1.94
61 62 2.425312 TCCACACGAACAAGTGCATTTT 59.575 40.909 0.00 0.00 45.45 1.82
62 63 2.020720 TCCACACGAACAAGTGCATTT 58.979 42.857 0.00 0.00 45.45 2.32
63 64 1.603802 CTCCACACGAACAAGTGCATT 59.396 47.619 0.00 0.00 45.45 3.56
64 65 1.229428 CTCCACACGAACAAGTGCAT 58.771 50.000 0.00 0.00 45.45 3.96
65 66 0.107897 ACTCCACACGAACAAGTGCA 60.108 50.000 0.00 0.00 45.45 4.57
66 67 1.860676 TACTCCACACGAACAAGTGC 58.139 50.000 0.00 0.00 45.45 4.40
67 68 5.418310 AAATTACTCCACACGAACAAGTG 57.582 39.130 0.00 0.00 46.83 3.16
68 69 6.050432 TGTAAATTACTCCACACGAACAAGT 58.950 36.000 4.67 0.00 0.00 3.16
69 70 6.533819 TGTAAATTACTCCACACGAACAAG 57.466 37.500 4.67 0.00 0.00 3.16
70 71 6.512091 GCTTGTAAATTACTCCACACGAACAA 60.512 38.462 4.67 0.00 0.00 2.83
71 72 5.049954 GCTTGTAAATTACTCCACACGAACA 60.050 40.000 4.67 0.00 0.00 3.18
72 73 5.049954 TGCTTGTAAATTACTCCACACGAAC 60.050 40.000 4.67 0.00 0.00 3.95
73 74 5.057819 TGCTTGTAAATTACTCCACACGAA 58.942 37.500 4.67 0.00 0.00 3.85
74 75 4.633175 TGCTTGTAAATTACTCCACACGA 58.367 39.130 4.67 0.00 0.00 4.35
75 76 4.142902 CCTGCTTGTAAATTACTCCACACG 60.143 45.833 4.67 0.00 0.00 4.49
76 77 4.760204 ACCTGCTTGTAAATTACTCCACAC 59.240 41.667 4.67 0.00 0.00 3.82
77 78 4.980573 ACCTGCTTGTAAATTACTCCACA 58.019 39.130 4.67 0.00 0.00 4.17
78 79 5.246307 AGACCTGCTTGTAAATTACTCCAC 58.754 41.667 4.67 0.00 0.00 4.02
79 80 5.499004 AGACCTGCTTGTAAATTACTCCA 57.501 39.130 4.67 0.00 0.00 3.86
80 81 6.875076 TCTAGACCTGCTTGTAAATTACTCC 58.125 40.000 4.67 0.00 0.00 3.85
81 82 8.773404 TTTCTAGACCTGCTTGTAAATTACTC 57.227 34.615 4.67 0.00 0.00 2.59
84 85 9.309516 CGTATTTCTAGACCTGCTTGTAAATTA 57.690 33.333 0.00 0.00 0.00 1.40
85 86 7.201617 GCGTATTTCTAGACCTGCTTGTAAATT 60.202 37.037 0.00 0.00 0.00 1.82
86 87 6.258068 GCGTATTTCTAGACCTGCTTGTAAAT 59.742 38.462 0.00 0.00 0.00 1.40
87 88 5.579511 GCGTATTTCTAGACCTGCTTGTAAA 59.420 40.000 0.00 0.00 0.00 2.01
88 89 5.107133 GCGTATTTCTAGACCTGCTTGTAA 58.893 41.667 0.00 0.00 0.00 2.41
89 90 4.441079 GGCGTATTTCTAGACCTGCTTGTA 60.441 45.833 0.00 0.00 0.00 2.41
90 91 3.522553 GCGTATTTCTAGACCTGCTTGT 58.477 45.455 0.00 0.00 0.00 3.16
91 92 2.866762 GGCGTATTTCTAGACCTGCTTG 59.133 50.000 0.00 0.00 0.00 4.01
92 93 2.766828 AGGCGTATTTCTAGACCTGCTT 59.233 45.455 0.00 0.00 0.00 3.91
93 94 2.389715 AGGCGTATTTCTAGACCTGCT 58.610 47.619 0.00 0.00 0.00 4.24
94 95 2.892784 AGGCGTATTTCTAGACCTGC 57.107 50.000 0.00 0.00 0.00 4.85
95 96 5.012328 AGAAAGGCGTATTTCTAGACCTG 57.988 43.478 13.23 0.00 45.44 4.00
96 97 4.957327 AGAGAAAGGCGTATTTCTAGACCT 59.043 41.667 14.40 7.09 46.84 3.85
97 98 5.265350 AGAGAAAGGCGTATTTCTAGACC 57.735 43.478 14.40 5.38 46.84 3.85
98 99 6.414402 CGTTAGAGAAAGGCGTATTTCTAGAC 59.586 42.308 14.40 12.21 46.84 2.59
99 100 6.094603 ACGTTAGAGAAAGGCGTATTTCTAGA 59.905 38.462 14.40 0.00 46.84 2.43
100 101 6.264088 ACGTTAGAGAAAGGCGTATTTCTAG 58.736 40.000 14.40 8.39 46.84 2.43
101 102 6.127925 TGACGTTAGAGAAAGGCGTATTTCTA 60.128 38.462 14.40 1.45 46.84 2.10
103 104 4.860907 TGACGTTAGAGAAAGGCGTATTTC 59.139 41.667 0.00 6.42 39.09 2.17
104 105 4.624452 GTGACGTTAGAGAAAGGCGTATTT 59.376 41.667 0.00 0.00 35.86 1.40
105 106 4.171754 GTGACGTTAGAGAAAGGCGTATT 58.828 43.478 0.00 0.00 35.86 1.89
106 107 3.192001 TGTGACGTTAGAGAAAGGCGTAT 59.808 43.478 0.00 0.00 35.86 3.06
107 108 2.553602 TGTGACGTTAGAGAAAGGCGTA 59.446 45.455 0.00 0.00 35.86 4.42
108 109 1.338973 TGTGACGTTAGAGAAAGGCGT 59.661 47.619 0.00 0.00 38.55 5.68
109 110 2.060326 TGTGACGTTAGAGAAAGGCG 57.940 50.000 0.00 0.00 0.00 5.52
110 111 3.424962 GCAATGTGACGTTAGAGAAAGGC 60.425 47.826 0.00 0.00 0.00 4.35
111 112 3.997021 AGCAATGTGACGTTAGAGAAAGG 59.003 43.478 0.00 0.00 0.00 3.11
112 113 5.220303 GCTAGCAATGTGACGTTAGAGAAAG 60.220 44.000 10.63 0.00 0.00 2.62
113 114 4.625742 GCTAGCAATGTGACGTTAGAGAAA 59.374 41.667 10.63 0.00 0.00 2.52
114 115 4.174009 GCTAGCAATGTGACGTTAGAGAA 58.826 43.478 10.63 0.00 0.00 2.87
115 116 3.192633 TGCTAGCAATGTGACGTTAGAGA 59.807 43.478 16.84 0.00 0.00 3.10
116 117 3.511699 TGCTAGCAATGTGACGTTAGAG 58.488 45.455 16.84 0.00 0.00 2.43
117 118 3.586100 TGCTAGCAATGTGACGTTAGA 57.414 42.857 16.84 0.00 0.00 2.10
118 119 5.281727 TCTATGCTAGCAATGTGACGTTAG 58.718 41.667 23.54 14.84 0.00 2.34
119 120 5.257082 TCTATGCTAGCAATGTGACGTTA 57.743 39.130 23.54 5.10 0.00 3.18
120 121 4.123497 TCTATGCTAGCAATGTGACGTT 57.877 40.909 23.54 4.02 0.00 3.99
121 122 3.801114 TCTATGCTAGCAATGTGACGT 57.199 42.857 23.54 4.83 0.00 4.34
122 123 5.164148 CGTAATCTATGCTAGCAATGTGACG 60.164 44.000 23.54 21.13 0.00 4.35
123 124 5.388890 GCGTAATCTATGCTAGCAATGTGAC 60.389 44.000 23.54 14.11 37.70 3.67
124 125 4.686091 GCGTAATCTATGCTAGCAATGTGA 59.314 41.667 23.54 16.66 37.70 3.58
125 126 4.448732 TGCGTAATCTATGCTAGCAATGTG 59.551 41.667 23.54 11.90 41.24 3.21
126 127 4.631131 TGCGTAATCTATGCTAGCAATGT 58.369 39.130 23.54 8.16 41.24 2.71
127 128 5.596268 TTGCGTAATCTATGCTAGCAATG 57.404 39.130 23.54 16.97 41.24 2.82
128 129 6.618287 TTTTGCGTAATCTATGCTAGCAAT 57.382 33.333 23.54 8.16 41.73 3.56
129 130 6.293407 GGATTTTGCGTAATCTATGCTAGCAA 60.293 38.462 23.54 5.64 41.24 3.91
130 131 5.179368 GGATTTTGCGTAATCTATGCTAGCA 59.821 40.000 21.85 21.85 41.24 3.49
131 132 5.179368 TGGATTTTGCGTAATCTATGCTAGC 59.821 40.000 8.10 8.10 41.24 3.42
132 133 6.425114 AGTGGATTTTGCGTAATCTATGCTAG 59.575 38.462 9.59 0.00 41.24 3.42
133 134 6.202762 CAGTGGATTTTGCGTAATCTATGCTA 59.797 38.462 9.59 0.00 41.24 3.49
134 135 5.008019 CAGTGGATTTTGCGTAATCTATGCT 59.992 40.000 9.59 0.00 41.24 3.79
135 136 5.207768 CAGTGGATTTTGCGTAATCTATGC 58.792 41.667 9.59 0.00 41.05 3.14
136 137 5.207768 GCAGTGGATTTTGCGTAATCTATG 58.792 41.667 9.59 7.65 35.37 2.23
137 138 4.275936 GGCAGTGGATTTTGCGTAATCTAT 59.724 41.667 9.59 0.00 41.17 1.98
138 139 3.625764 GGCAGTGGATTTTGCGTAATCTA 59.374 43.478 9.59 2.50 41.17 1.98
139 140 2.423538 GGCAGTGGATTTTGCGTAATCT 59.576 45.455 9.59 0.00 41.17 2.40
140 141 2.163412 TGGCAGTGGATTTTGCGTAATC 59.837 45.455 0.00 2.81 41.17 1.75
141 142 2.166829 TGGCAGTGGATTTTGCGTAAT 58.833 42.857 0.00 0.00 41.17 1.89
142 143 1.610363 TGGCAGTGGATTTTGCGTAA 58.390 45.000 0.00 0.00 41.17 3.18
143 144 1.832883 ATGGCAGTGGATTTTGCGTA 58.167 45.000 0.00 0.00 41.17 4.42
144 145 0.968405 AATGGCAGTGGATTTTGCGT 59.032 45.000 0.00 0.00 41.17 5.24
145 146 2.083167 AAATGGCAGTGGATTTTGCG 57.917 45.000 0.00 0.00 41.17 4.85
146 147 5.938438 TTTTAAATGGCAGTGGATTTTGC 57.062 34.783 0.00 0.00 39.56 3.68
167 168 7.662897 TGTTGACTGTTAACCTCTTTGTTTTT 58.337 30.769 12.19 0.00 0.00 1.94
168 169 7.039993 ACTGTTGACTGTTAACCTCTTTGTTTT 60.040 33.333 12.19 0.00 0.00 2.43
169 170 6.433093 ACTGTTGACTGTTAACCTCTTTGTTT 59.567 34.615 12.19 0.00 0.00 2.83
170 171 5.944007 ACTGTTGACTGTTAACCTCTTTGTT 59.056 36.000 12.19 0.00 0.00 2.83
171 172 5.497474 ACTGTTGACTGTTAACCTCTTTGT 58.503 37.500 12.19 1.00 0.00 2.83
172 173 6.436843 AACTGTTGACTGTTAACCTCTTTG 57.563 37.500 12.19 0.50 36.47 2.77
173 174 6.657541 TGAAACTGTTGACTGTTAACCTCTTT 59.342 34.615 12.19 7.20 37.09 2.52
174 175 6.177610 TGAAACTGTTGACTGTTAACCTCTT 58.822 36.000 12.19 3.58 37.09 2.85
175 176 5.741011 TGAAACTGTTGACTGTTAACCTCT 58.259 37.500 12.19 0.00 37.09 3.69
176 177 6.619801 ATGAAACTGTTGACTGTTAACCTC 57.380 37.500 12.19 0.00 37.09 3.85
177 178 7.122055 TCAAATGAAACTGTTGACTGTTAACCT 59.878 33.333 12.19 0.00 37.09 3.50
178 179 7.254852 TCAAATGAAACTGTTGACTGTTAACC 58.745 34.615 12.19 0.00 37.09 2.85
292 353 6.128282 ACTGAAACTGTTGACTGTTAACTGTG 60.128 38.462 21.20 14.68 39.24 3.66
745 818 5.209818 ACTTTAAATGACAGGACTGACGA 57.790 39.130 6.29 0.00 0.00 4.20
746 819 4.389077 GGACTTTAAATGACAGGACTGACG 59.611 45.833 6.29 0.00 0.00 4.35
1045 1129 3.077391 TCTCCAGGGACCCAATTCAAATT 59.923 43.478 14.60 0.00 0.00 1.82
1046 1130 2.654385 TCTCCAGGGACCCAATTCAAAT 59.346 45.455 14.60 0.00 0.00 2.32
1047 1131 2.041620 CTCTCCAGGGACCCAATTCAAA 59.958 50.000 14.60 0.00 0.00 2.69
1048 1132 1.635487 CTCTCCAGGGACCCAATTCAA 59.365 52.381 14.60 0.00 0.00 2.69
1049 1133 1.203428 TCTCTCCAGGGACCCAATTCA 60.203 52.381 14.60 0.00 0.00 2.57
1050 1134 1.584724 TCTCTCCAGGGACCCAATTC 58.415 55.000 14.60 0.00 0.00 2.17
1051 1135 1.918957 CTTCTCTCCAGGGACCCAATT 59.081 52.381 14.60 0.00 0.00 2.32
1052 1136 1.589414 CTTCTCTCCAGGGACCCAAT 58.411 55.000 14.60 0.00 0.00 3.16
1053 1137 0.547712 CCTTCTCTCCAGGGACCCAA 60.548 60.000 14.60 0.00 0.00 4.12
1054 1138 1.081092 CCTTCTCTCCAGGGACCCA 59.919 63.158 14.60 0.00 0.00 4.51
1055 1139 0.252742 TTCCTTCTCTCCAGGGACCC 60.253 60.000 0.59 0.59 31.50 4.46
1056 1140 0.906066 GTTCCTTCTCTCCAGGGACC 59.094 60.000 0.00 0.00 34.07 4.46
1057 1141 0.906066 GGTTCCTTCTCTCCAGGGAC 59.094 60.000 0.00 0.00 39.07 4.46
1058 1142 0.793617 AGGTTCCTTCTCTCCAGGGA 59.206 55.000 0.00 0.00 31.50 4.20
1059 1143 1.199615 GAGGTTCCTTCTCTCCAGGG 58.800 60.000 0.00 0.00 31.50 4.45
1060 1144 1.944177 TGAGGTTCCTTCTCTCCAGG 58.056 55.000 0.00 0.00 32.78 4.45
1061 1145 2.903135 ACTTGAGGTTCCTTCTCTCCAG 59.097 50.000 0.00 0.00 32.78 3.86
1062 1146 2.634940 CACTTGAGGTTCCTTCTCTCCA 59.365 50.000 0.00 0.00 32.78 3.86
1063 1147 2.027653 CCACTTGAGGTTCCTTCTCTCC 60.028 54.545 0.00 0.00 32.78 3.71
1064 1148 2.614229 GCCACTTGAGGTTCCTTCTCTC 60.614 54.545 0.00 0.00 32.78 3.20
1065 1149 1.349357 GCCACTTGAGGTTCCTTCTCT 59.651 52.381 0.00 0.00 32.78 3.10
1066 1150 1.072331 TGCCACTTGAGGTTCCTTCTC 59.928 52.381 0.00 0.00 0.00 2.87
1067 1151 1.072965 CTGCCACTTGAGGTTCCTTCT 59.927 52.381 0.00 0.00 0.00 2.85
1068 1152 1.072331 TCTGCCACTTGAGGTTCCTTC 59.928 52.381 0.00 0.00 0.00 3.46
1069 1153 1.140312 TCTGCCACTTGAGGTTCCTT 58.860 50.000 0.00 0.00 0.00 3.36
1070 1154 1.140312 TTCTGCCACTTGAGGTTCCT 58.860 50.000 0.00 0.00 0.00 3.36
1071 1155 1.981256 TTTCTGCCACTTGAGGTTCC 58.019 50.000 0.00 0.00 0.00 3.62
1072 1156 3.305608 CCATTTTCTGCCACTTGAGGTTC 60.306 47.826 0.00 0.00 0.00 3.62
1073 1157 2.629617 CCATTTTCTGCCACTTGAGGTT 59.370 45.455 0.00 0.00 0.00 3.50
1074 1158 2.158475 TCCATTTTCTGCCACTTGAGGT 60.158 45.455 0.00 0.00 0.00 3.85
1075 1159 2.490903 CTCCATTTTCTGCCACTTGAGG 59.509 50.000 0.00 0.00 0.00 3.86
1076 1160 3.415212 TCTCCATTTTCTGCCACTTGAG 58.585 45.455 0.00 0.00 0.00 3.02
1077 1161 3.507162 TCTCCATTTTCTGCCACTTGA 57.493 42.857 0.00 0.00 0.00 3.02
1078 1162 4.201851 CGTATCTCCATTTTCTGCCACTTG 60.202 45.833 0.00 0.00 0.00 3.16
1079 1163 3.941483 CGTATCTCCATTTTCTGCCACTT 59.059 43.478 0.00 0.00 0.00 3.16
1080 1164 3.535561 CGTATCTCCATTTTCTGCCACT 58.464 45.455 0.00 0.00 0.00 4.00
1081 1165 2.614057 CCGTATCTCCATTTTCTGCCAC 59.386 50.000 0.00 0.00 0.00 5.01
1082 1166 2.503765 TCCGTATCTCCATTTTCTGCCA 59.496 45.455 0.00 0.00 0.00 4.92
1083 1167 3.194005 TCCGTATCTCCATTTTCTGCC 57.806 47.619 0.00 0.00 0.00 4.85
1084 1168 5.296780 TCAAATCCGTATCTCCATTTTCTGC 59.703 40.000 0.00 0.00 0.00 4.26
1085 1169 6.925610 TCAAATCCGTATCTCCATTTTCTG 57.074 37.500 0.00 0.00 0.00 3.02
1086 1170 7.112779 AGTTCAAATCCGTATCTCCATTTTCT 58.887 34.615 0.00 0.00 0.00 2.52
1087 1171 7.321745 AGTTCAAATCCGTATCTCCATTTTC 57.678 36.000 0.00 0.00 0.00 2.29
1088 1172 7.393234 TCAAGTTCAAATCCGTATCTCCATTTT 59.607 33.333 0.00 0.00 0.00 1.82
1089 1173 6.884295 TCAAGTTCAAATCCGTATCTCCATTT 59.116 34.615 0.00 0.00 0.00 2.32
1090 1174 6.414732 TCAAGTTCAAATCCGTATCTCCATT 58.585 36.000 0.00 0.00 0.00 3.16
1091 1175 5.989477 TCAAGTTCAAATCCGTATCTCCAT 58.011 37.500 0.00 0.00 0.00 3.41
1092 1176 5.414789 TCAAGTTCAAATCCGTATCTCCA 57.585 39.130 0.00 0.00 0.00 3.86
1093 1177 5.277538 GCATCAAGTTCAAATCCGTATCTCC 60.278 44.000 0.00 0.00 0.00 3.71
1094 1178 5.277538 GGCATCAAGTTCAAATCCGTATCTC 60.278 44.000 0.00 0.00 0.00 2.75
1095 1179 4.576463 GGCATCAAGTTCAAATCCGTATCT 59.424 41.667 0.00 0.00 0.00 1.98
1096 1180 4.576463 AGGCATCAAGTTCAAATCCGTATC 59.424 41.667 0.00 0.00 0.00 2.24
1097 1181 4.526970 AGGCATCAAGTTCAAATCCGTAT 58.473 39.130 0.00 0.00 0.00 3.06
1098 1182 3.938963 GAGGCATCAAGTTCAAATCCGTA 59.061 43.478 0.00 0.00 0.00 4.02
1099 1183 2.749621 GAGGCATCAAGTTCAAATCCGT 59.250 45.455 0.00 0.00 0.00 4.69
1100 1184 2.749076 TGAGGCATCAAGTTCAAATCCG 59.251 45.455 0.00 0.00 30.61 4.18
1184 1268 9.163894 AGTTCAAATCCATATCTCCATTCTCTA 57.836 33.333 0.00 0.00 0.00 2.43
1395 1728 8.310382 TCTCTTCTTTTCTCTTGAAGTATCCAG 58.690 37.037 0.00 0.00 38.52 3.86
1435 1768 2.616842 CAAAGTAAACACCGTGCCTCTT 59.383 45.455 0.00 0.00 0.00 2.85
1443 1776 1.336755 AGCAAGGCAAAGTAAACACCG 59.663 47.619 0.00 0.00 0.00 4.94
1746 2079 1.831580 GCTCATTCAGCTGGAACCTT 58.168 50.000 15.13 0.00 45.83 3.50
1756 2089 1.329906 GATGCGGTTGAGCTCATTCAG 59.670 52.381 19.04 14.95 38.13 3.02
1846 2179 7.551974 AGAAGTTGAGATTGAATTGTCATCGAT 59.448 33.333 0.00 0.00 32.48 3.59
1889 2222 7.853377 TCGATGTGAACTATATTCGTCATTC 57.147 36.000 0.00 0.00 0.00 2.67
1902 2235 3.259374 ACCACTTCTCATCGATGTGAACT 59.741 43.478 29.52 21.18 45.66 3.01
2175 2508 0.323629 TGCACACAGGCCTAGTTACC 59.676 55.000 3.98 0.00 0.00 2.85
2451 2784 4.578516 TGTACCAGTTCCTGAATGTTTGTG 59.421 41.667 0.00 0.00 32.44 3.33
2460 2793 1.348064 CACCCTGTACCAGTTCCTGA 58.652 55.000 0.00 0.00 32.44 3.86
2657 2990 4.587684 CCCTAGTATCAACAACTACCCGAT 59.412 45.833 0.00 0.00 0.00 4.18
3087 3564 1.413227 GGATAGTAGTGTGGGCCTCCT 60.413 57.143 4.53 3.47 0.00 3.69
3091 3568 0.759346 CCAGGATAGTAGTGTGGGCC 59.241 60.000 0.00 0.00 0.00 5.80
3092 3569 1.789523 TCCAGGATAGTAGTGTGGGC 58.210 55.000 0.00 0.00 0.00 5.36
3093 3570 3.643237 TCTTCCAGGATAGTAGTGTGGG 58.357 50.000 0.00 0.00 0.00 4.61
3094 3571 4.502259 GCATCTTCCAGGATAGTAGTGTGG 60.502 50.000 0.00 0.00 0.00 4.17
3095 3572 4.100035 TGCATCTTCCAGGATAGTAGTGTG 59.900 45.833 0.00 0.00 0.00 3.82
3096 3573 4.290093 TGCATCTTCCAGGATAGTAGTGT 58.710 43.478 0.00 0.00 0.00 3.55
3097 3574 4.798924 GCTGCATCTTCCAGGATAGTAGTG 60.799 50.000 0.00 0.00 0.00 2.74
3098 3575 3.323403 GCTGCATCTTCCAGGATAGTAGT 59.677 47.826 0.00 0.00 0.00 2.73
3099 3576 3.577848 AGCTGCATCTTCCAGGATAGTAG 59.422 47.826 1.02 0.00 0.00 2.57
3101 3578 2.406559 AGCTGCATCTTCCAGGATAGT 58.593 47.619 1.02 0.00 0.00 2.12
3102 3579 4.822685 ATAGCTGCATCTTCCAGGATAG 57.177 45.455 1.02 0.00 0.00 2.08
3103 3580 5.782331 AGTAATAGCTGCATCTTCCAGGATA 59.218 40.000 1.02 0.00 0.00 2.59
3104 3581 4.596643 AGTAATAGCTGCATCTTCCAGGAT 59.403 41.667 1.02 0.00 0.00 3.24
3106 3583 4.202295 TGAGTAATAGCTGCATCTTCCAGG 60.202 45.833 1.02 0.00 0.00 4.45
3108 3585 5.557576 ATGAGTAATAGCTGCATCTTCCA 57.442 39.130 1.02 0.00 0.00 3.53
3109 3586 6.484643 TGAAATGAGTAATAGCTGCATCTTCC 59.515 38.462 1.02 0.00 0.00 3.46
3110 3587 7.011763 TGTGAAATGAGTAATAGCTGCATCTTC 59.988 37.037 1.02 0.00 0.00 2.87
3111 3588 6.825213 TGTGAAATGAGTAATAGCTGCATCTT 59.175 34.615 1.02 0.00 0.00 2.40
3112 3589 6.351711 TGTGAAATGAGTAATAGCTGCATCT 58.648 36.000 1.02 0.00 0.00 2.90
3113 3590 6.609237 TGTGAAATGAGTAATAGCTGCATC 57.391 37.500 1.02 0.00 0.00 3.91
3114 3591 7.578310 ATTGTGAAATGAGTAATAGCTGCAT 57.422 32.000 1.02 0.00 0.00 3.96
3115 3592 7.227314 CCTATTGTGAAATGAGTAATAGCTGCA 59.773 37.037 1.02 0.00 32.61 4.41
3116 3593 7.227512 ACCTATTGTGAAATGAGTAATAGCTGC 59.772 37.037 0.00 0.00 32.61 5.25
3117 3594 8.668510 ACCTATTGTGAAATGAGTAATAGCTG 57.331 34.615 0.00 0.00 32.61 4.24
3118 3595 9.113838 CAACCTATTGTGAAATGAGTAATAGCT 57.886 33.333 0.00 0.00 32.61 3.32
3119 3596 9.109393 TCAACCTATTGTGAAATGAGTAATAGC 57.891 33.333 0.00 0.00 37.11 2.97
3121 3598 9.952030 TGTCAACCTATTGTGAAATGAGTAATA 57.048 29.630 0.00 0.00 37.11 0.98
3122 3599 8.862325 TGTCAACCTATTGTGAAATGAGTAAT 57.138 30.769 0.00 0.00 37.11 1.89
3123 3600 8.684386 TTGTCAACCTATTGTGAAATGAGTAA 57.316 30.769 0.00 0.00 37.11 2.24
3124 3601 8.862325 ATTGTCAACCTATTGTGAAATGAGTA 57.138 30.769 0.00 0.00 37.11 2.59
3125 3602 7.765695 ATTGTCAACCTATTGTGAAATGAGT 57.234 32.000 0.00 0.00 37.11 3.41
3126 3603 9.726232 CATATTGTCAACCTATTGTGAAATGAG 57.274 33.333 0.00 0.00 37.11 2.90
3127 3604 8.190122 GCATATTGTCAACCTATTGTGAAATGA 58.810 33.333 0.00 0.00 37.11 2.57
3128 3605 7.975058 TGCATATTGTCAACCTATTGTGAAATG 59.025 33.333 0.00 0.00 37.11 2.32
3129 3606 8.065473 TGCATATTGTCAACCTATTGTGAAAT 57.935 30.769 0.00 0.00 37.11 2.17
3130 3607 7.459795 TGCATATTGTCAACCTATTGTGAAA 57.540 32.000 0.00 0.00 37.11 2.69
3131 3608 7.459795 TTGCATATTGTCAACCTATTGTGAA 57.540 32.000 0.00 0.00 37.11 3.18
3132 3609 7.459795 TTTGCATATTGTCAACCTATTGTGA 57.540 32.000 0.00 0.00 37.11 3.58
3133 3610 7.975058 TCATTTGCATATTGTCAACCTATTGTG 59.025 33.333 0.00 0.00 37.11 3.33
3134 3611 8.065473 TCATTTGCATATTGTCAACCTATTGT 57.935 30.769 0.00 0.00 37.11 2.71
3135 3612 8.810427 GTTCATTTGCATATTGTCAACCTATTG 58.190 33.333 0.00 0.00 37.14 1.90
3136 3613 8.530311 TGTTCATTTGCATATTGTCAACCTATT 58.470 29.630 0.00 0.00 0.00 1.73
3137 3614 8.065473 TGTTCATTTGCATATTGTCAACCTAT 57.935 30.769 0.00 0.00 0.00 2.57
3138 3615 7.176515 ACTGTTCATTTGCATATTGTCAACCTA 59.823 33.333 0.00 0.00 0.00 3.08
3139 3616 6.015180 ACTGTTCATTTGCATATTGTCAACCT 60.015 34.615 0.00 0.00 0.00 3.50
3140 3617 6.158598 ACTGTTCATTTGCATATTGTCAACC 58.841 36.000 0.00 0.00 0.00 3.77
3141 3618 7.596248 AGAACTGTTCATTTGCATATTGTCAAC 59.404 33.333 21.50 0.00 0.00 3.18
3142 3619 7.595875 CAGAACTGTTCATTTGCATATTGTCAA 59.404 33.333 21.50 0.00 0.00 3.18
3143 3620 7.085746 CAGAACTGTTCATTTGCATATTGTCA 58.914 34.615 21.50 0.00 0.00 3.58
3144 3621 7.061441 CACAGAACTGTTCATTTGCATATTGTC 59.939 37.037 21.50 0.00 42.83 3.18
3145 3622 6.864685 CACAGAACTGTTCATTTGCATATTGT 59.135 34.615 21.50 10.33 42.83 2.71
3146 3623 6.864685 ACACAGAACTGTTCATTTGCATATTG 59.135 34.615 21.50 9.76 42.83 1.90
3147 3624 6.985117 ACACAGAACTGTTCATTTGCATATT 58.015 32.000 21.50 0.00 42.83 1.28
3148 3625 6.579666 ACACAGAACTGTTCATTTGCATAT 57.420 33.333 21.50 0.00 42.83 1.78
3149 3626 6.389830 AACACAGAACTGTTCATTTGCATA 57.610 33.333 21.50 0.00 42.83 3.14
3150 3627 4.924305 ACACAGAACTGTTCATTTGCAT 57.076 36.364 21.50 2.05 42.83 3.96
3151 3628 4.717233 AACACAGAACTGTTCATTTGCA 57.283 36.364 21.50 0.00 42.83 4.08
3152 3629 6.672147 AGATAACACAGAACTGTTCATTTGC 58.328 36.000 21.50 4.42 42.83 3.68
3153 3630 9.173939 GAAAGATAACACAGAACTGTTCATTTG 57.826 33.333 21.50 16.11 42.83 2.32
3154 3631 8.902806 TGAAAGATAACACAGAACTGTTCATTT 58.097 29.630 21.50 10.99 42.83 2.32
3155 3632 8.450578 TGAAAGATAACACAGAACTGTTCATT 57.549 30.769 21.50 12.29 42.83 2.57
3156 3633 7.173907 CCTGAAAGATAACACAGAACTGTTCAT 59.826 37.037 21.50 7.34 37.82 2.57
3157 3634 6.483307 CCTGAAAGATAACACAGAACTGTTCA 59.517 38.462 21.50 1.07 37.82 3.18
3158 3635 6.483640 ACCTGAAAGATAACACAGAACTGTTC 59.516 38.462 12.54 12.54 37.82 3.18
3159 3636 6.357367 ACCTGAAAGATAACACAGAACTGTT 58.643 36.000 4.63 0.00 37.82 3.16
3160 3637 5.930135 ACCTGAAAGATAACACAGAACTGT 58.070 37.500 1.32 1.32 40.03 3.55
3161 3638 7.962964 TTACCTGAAAGATAACACAGAACTG 57.037 36.000 0.00 0.00 34.07 3.16
3167 3644 9.787435 ACTGTTTATTACCTGAAAGATAACACA 57.213 29.630 0.00 0.00 34.07 3.72
3172 3649 9.444600 GGACAACTGTTTATTACCTGAAAGATA 57.555 33.333 0.00 0.00 34.07 1.98
3173 3650 8.164070 AGGACAACTGTTTATTACCTGAAAGAT 58.836 33.333 0.00 0.00 34.07 2.40
3174 3651 7.514721 AGGACAACTGTTTATTACCTGAAAGA 58.485 34.615 0.00 0.00 34.07 2.52
3175 3652 7.444183 TGAGGACAACTGTTTATTACCTGAAAG 59.556 37.037 0.00 0.00 0.00 2.62
3176 3653 7.284074 TGAGGACAACTGTTTATTACCTGAAA 58.716 34.615 0.00 0.00 0.00 2.69
3177 3654 6.833041 TGAGGACAACTGTTTATTACCTGAA 58.167 36.000 0.00 0.00 0.00 3.02
3178 3655 6.269077 TCTGAGGACAACTGTTTATTACCTGA 59.731 38.462 0.00 0.00 0.00 3.86
3179 3656 6.464222 TCTGAGGACAACTGTTTATTACCTG 58.536 40.000 0.00 0.00 0.00 4.00
3180 3657 6.681729 TCTGAGGACAACTGTTTATTACCT 57.318 37.500 0.00 0.00 0.00 3.08
3181 3658 7.227910 TGTTTCTGAGGACAACTGTTTATTACC 59.772 37.037 0.00 0.00 0.00 2.85
3182 3659 8.149973 TGTTTCTGAGGACAACTGTTTATTAC 57.850 34.615 0.00 0.00 0.00 1.89
3183 3660 8.740123 TTGTTTCTGAGGACAACTGTTTATTA 57.260 30.769 5.05 0.00 31.30 0.98
3184 3661 7.639113 TTGTTTCTGAGGACAACTGTTTATT 57.361 32.000 5.05 0.00 31.30 1.40
3193 3670 2.682856 GTGCAGTTGTTTCTGAGGACAA 59.317 45.455 0.00 5.05 37.61 3.18
3194 3671 2.288666 GTGCAGTTGTTTCTGAGGACA 58.711 47.619 0.00 0.00 37.61 4.02
3195 3672 2.288666 TGTGCAGTTGTTTCTGAGGAC 58.711 47.619 0.00 0.00 37.61 3.85
3196 3673 2.708216 TGTGCAGTTGTTTCTGAGGA 57.292 45.000 0.00 0.00 37.61 3.71
3197 3674 2.033801 CCTTGTGCAGTTGTTTCTGAGG 59.966 50.000 0.00 0.00 37.61 3.86
3198 3675 2.542411 GCCTTGTGCAGTTGTTTCTGAG 60.542 50.000 0.00 0.00 40.77 3.35
3199 3676 1.405105 GCCTTGTGCAGTTGTTTCTGA 59.595 47.619 0.00 0.00 40.77 3.27
3200 3677 1.843992 GCCTTGTGCAGTTGTTTCTG 58.156 50.000 0.00 0.00 40.77 3.02
3211 3688 1.069049 ACCTGACAAAATGCCTTGTGC 59.931 47.619 1.09 0.00 39.63 4.57
3212 3689 3.125316 CAACCTGACAAAATGCCTTGTG 58.875 45.455 1.09 0.00 39.63 3.33
3213 3690 2.765699 ACAACCTGACAAAATGCCTTGT 59.234 40.909 0.00 0.00 42.23 3.16
3214 3691 3.457610 ACAACCTGACAAAATGCCTTG 57.542 42.857 0.00 0.00 0.00 3.61
3215 3692 3.197549 ACAACAACCTGACAAAATGCCTT 59.802 39.130 0.00 0.00 0.00 4.35
3216 3693 2.765699 ACAACAACCTGACAAAATGCCT 59.234 40.909 0.00 0.00 0.00 4.75
3217 3694 3.177997 ACAACAACCTGACAAAATGCC 57.822 42.857 0.00 0.00 0.00 4.40
3218 3695 5.105752 TGTTACAACAACCTGACAAAATGC 58.894 37.500 0.00 0.00 35.67 3.56
3219 3696 7.114811 GCTATGTTACAACAACCTGACAAAATG 59.885 37.037 0.00 0.00 43.03 2.32
3220 3697 7.014230 AGCTATGTTACAACAACCTGACAAAAT 59.986 33.333 0.00 0.00 43.03 1.82
3221 3698 6.320164 AGCTATGTTACAACAACCTGACAAAA 59.680 34.615 0.00 0.00 43.03 2.44
3222 3699 5.825679 AGCTATGTTACAACAACCTGACAAA 59.174 36.000 0.00 0.00 43.03 2.83
3223 3700 5.373222 AGCTATGTTACAACAACCTGACAA 58.627 37.500 0.00 0.00 43.03 3.18
3224 3701 4.968259 AGCTATGTTACAACAACCTGACA 58.032 39.130 0.00 0.00 43.03 3.58
3225 3702 6.164176 ACTAGCTATGTTACAACAACCTGAC 58.836 40.000 0.00 0.00 43.03 3.51
3226 3703 6.354794 ACTAGCTATGTTACAACAACCTGA 57.645 37.500 0.00 0.00 43.03 3.86
3227 3704 6.874134 AGAACTAGCTATGTTACAACAACCTG 59.126 38.462 0.00 0.00 43.03 4.00
3228 3705 6.874134 CAGAACTAGCTATGTTACAACAACCT 59.126 38.462 0.00 0.00 43.03 3.50
3229 3706 6.649557 ACAGAACTAGCTATGTTACAACAACC 59.350 38.462 0.00 0.00 43.03 3.77
3230 3707 7.653767 ACAGAACTAGCTATGTTACAACAAC 57.346 36.000 0.00 0.00 43.03 3.32
3231 3708 9.767228 TTTACAGAACTAGCTATGTTACAACAA 57.233 29.630 0.00 0.00 43.03 2.83
3232 3709 9.199982 GTTTACAGAACTAGCTATGTTACAACA 57.800 33.333 0.00 0.00 44.06 3.33
3233 3710 9.199982 TGTTTACAGAACTAGCTATGTTACAAC 57.800 33.333 0.00 2.09 0.00 3.32
3234 3711 9.938280 ATGTTTACAGAACTAGCTATGTTACAA 57.062 29.630 0.00 0.00 0.00 2.41
3239 3716 9.547753 CCATTATGTTTACAGAACTAGCTATGT 57.452 33.333 0.00 0.00 29.14 2.29
3240 3717 9.547753 ACCATTATGTTTACAGAACTAGCTATG 57.452 33.333 0.00 0.00 29.14 2.23
3241 3718 9.547753 CACCATTATGTTTACAGAACTAGCTAT 57.452 33.333 0.00 0.00 29.14 2.97
3242 3719 8.537016 ACACCATTATGTTTACAGAACTAGCTA 58.463 33.333 0.00 0.00 29.14 3.32
3243 3720 7.394816 ACACCATTATGTTTACAGAACTAGCT 58.605 34.615 0.00 0.00 29.14 3.32
3244 3721 7.611213 ACACCATTATGTTTACAGAACTAGC 57.389 36.000 0.00 0.00 29.14 3.42
3262 3739 4.472108 TCGGGGAGACTTTATTTACACCAT 59.528 41.667 0.00 0.00 0.00 3.55
3347 3826 0.318614 TGCGCTTTTTAAGGCTGCAC 60.319 50.000 9.73 0.00 34.90 4.57
3364 3843 6.881065 TGCTCATATTTAATAGGAGTCCATGC 59.119 38.462 22.22 11.90 43.52 4.06
3405 3884 9.941664 CATCATAAAGGTTCTGTATTTGTGATC 57.058 33.333 6.27 0.00 40.53 2.92
3407 3886 9.513906 TTCATCATAAAGGTTCTGTATTTGTGA 57.486 29.630 0.00 0.00 38.07 3.58
3543 4042 2.309162 TGCTACTCCTGTCCTCTACACT 59.691 50.000 0.00 0.00 33.45 3.55


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.