Multiple sequence alignment - TraesCS2B01G019600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G019600 chr2B 100.000 2888 0 0 1 2888 9106804 9103917 0.000000e+00 5334
1 TraesCS2B01G019600 chrUn 90.625 2144 164 16 1 2120 15603615 15605745 0.000000e+00 2811
2 TraesCS2B01G019600 chrUn 90.392 2144 169 13 1 2120 15417592 15419722 0.000000e+00 2784
3 TraesCS2B01G019600 chrUn 90.299 2144 171 13 1 2120 15746493 15744363 0.000000e+00 2772
4 TraesCS2B01G019600 chrUn 90.023 2145 174 14 1 2120 15575197 15577326 0.000000e+00 2739
5 TraesCS2B01G019600 chrUn 91.753 1249 95 5 876 2120 418324313 418323069 0.000000e+00 1729
6 TraesCS2B01G019600 chrUn 92.162 1110 85 2 876 1983 438392172 438393281 0.000000e+00 1567
7 TraesCS2B01G019600 chrUn 91.335 981 74 7 1145 2120 357124588 357125562 0.000000e+00 1330
8 TraesCS2B01G019600 chrUn 81.345 1383 234 17 339 1713 15760467 15759101 0.000000e+00 1103
9 TraesCS2B01G019600 chrUn 86.921 604 50 9 4 587 431964351 431963757 0.000000e+00 651
10 TraesCS2B01G019600 chrUn 83.657 361 40 11 2467 2823 15953231 15952886 3.590000e-84 322
11 TraesCS2B01G019600 chrUn 85.667 300 30 6 2118 2415 357125655 357125943 1.300000e-78 303
12 TraesCS2B01G019600 chr2A 80.623 1765 326 16 317 2076 2876153 2877906 0.000000e+00 1351
13 TraesCS2B01G019600 chr2D 79.103 1694 329 19 413 2097 4351664 4353341 0.000000e+00 1144
14 TraesCS2B01G019600 chr2D 79.103 1694 329 19 413 2097 4383188 4384865 0.000000e+00 1144
15 TraesCS2B01G019600 chr7D 78.400 1787 344 33 316 2086 14422417 14420657 0.000000e+00 1123


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G019600 chr2B 9103917 9106804 2887 True 5334.0 5334 100.000 1 2888 1 chr2B.!!$R1 2887
1 TraesCS2B01G019600 chrUn 15603615 15605745 2130 False 2811.0 2811 90.625 1 2120 1 chrUn.!!$F3 2119
2 TraesCS2B01G019600 chrUn 15417592 15419722 2130 False 2784.0 2784 90.392 1 2120 1 chrUn.!!$F1 2119
3 TraesCS2B01G019600 chrUn 15744363 15746493 2130 True 2772.0 2772 90.299 1 2120 1 chrUn.!!$R1 2119
4 TraesCS2B01G019600 chrUn 15575197 15577326 2129 False 2739.0 2739 90.023 1 2120 1 chrUn.!!$F2 2119
5 TraesCS2B01G019600 chrUn 418323069 418324313 1244 True 1729.0 1729 91.753 876 2120 1 chrUn.!!$R4 1244
6 TraesCS2B01G019600 chrUn 438392172 438393281 1109 False 1567.0 1567 92.162 876 1983 1 chrUn.!!$F4 1107
7 TraesCS2B01G019600 chrUn 15759101 15760467 1366 True 1103.0 1103 81.345 339 1713 1 chrUn.!!$R2 1374
8 TraesCS2B01G019600 chrUn 357124588 357125943 1355 False 816.5 1330 88.501 1145 2415 2 chrUn.!!$F5 1270
9 TraesCS2B01G019600 chrUn 431963757 431964351 594 True 651.0 651 86.921 4 587 1 chrUn.!!$R5 583
10 TraesCS2B01G019600 chr2A 2876153 2877906 1753 False 1351.0 1351 80.623 317 2076 1 chr2A.!!$F1 1759
11 TraesCS2B01G019600 chr2D 4351664 4353341 1677 False 1144.0 1144 79.103 413 2097 1 chr2D.!!$F1 1684
12 TraesCS2B01G019600 chr2D 4383188 4384865 1677 False 1144.0 1144 79.103 413 2097 1 chr2D.!!$F2 1684
13 TraesCS2B01G019600 chr7D 14420657 14422417 1760 True 1123.0 1123 78.400 316 2086 1 chr7D.!!$R1 1770

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
113 114 0.319211 TCCCTGTTGTACTTGACGCG 60.319 55.0 3.53 3.53 0.0 6.01 F
786 818 0.394216 TTGGTAGCCCGCGACTAGTA 60.394 55.0 8.23 0.00 0.0 1.82 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1758 1791 0.172803 ATAGTGTTGAGGCGACGACC 59.827 55.0 0.0 0.0 0.0 4.79 R
2427 2562 0.096454 GCCAACGAGAACAATACGCC 59.904 55.0 0.0 0.0 0.0 5.68 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
51 52 9.654663 ATTAGAGTAGATGTACCTTGTTTTGTC 57.345 33.333 0.00 0.00 0.00 3.18
63 64 3.495670 TGTTTTGTCCGGTTCAACAAG 57.504 42.857 0.00 0.00 36.78 3.16
101 102 0.790993 TCCCTGTCCTACTCCCTGTT 59.209 55.000 0.00 0.00 0.00 3.16
111 112 2.814280 ACTCCCTGTTGTACTTGACG 57.186 50.000 0.00 0.00 0.00 4.35
112 113 1.270147 ACTCCCTGTTGTACTTGACGC 60.270 52.381 0.00 0.00 0.00 5.19
113 114 0.319211 TCCCTGTTGTACTTGACGCG 60.319 55.000 3.53 3.53 0.00 6.01
114 115 1.491563 CCTGTTGTACTTGACGCGC 59.508 57.895 5.73 0.00 0.00 6.86
115 116 1.127817 CTGTTGTACTTGACGCGCG 59.872 57.895 30.96 30.96 0.00 6.86
116 117 2.202008 GTTGTACTTGACGCGCGC 60.202 61.111 32.58 23.91 0.00 6.86
137 138 4.663091 CGCGTGTAAAACTTAAGTGTTGTC 59.337 41.667 19.48 12.95 0.00 3.18
167 188 4.189639 TGTGGCATGTGTACACGTTATA 57.810 40.909 18.15 1.42 37.92 0.98
176 197 7.908082 GCATGTGTACACGTTATATTTCATGTT 59.092 33.333 18.15 0.00 33.78 2.71
200 221 6.574350 TCAAACCTATAGAGCTGCTTTACTC 58.426 40.000 2.53 0.00 0.00 2.59
212 233 5.242393 AGCTGCTTTACTCAACAATCAACAT 59.758 36.000 0.00 0.00 0.00 2.71
240 261 6.204495 ACCGCTGCTAGTATTAGTAGTACTTC 59.796 42.308 8.40 0.00 40.53 3.01
247 268 8.305317 GCTAGTATTAGTAGTACTTCCCAATGG 58.695 40.741 8.40 0.00 34.43 3.16
250 271 8.066247 AGTATTAGTAGTACTTCCCAATGGACT 58.934 37.037 8.40 0.00 41.57 3.85
262 283 3.244700 CCCAATGGACTGAGAACTTGTCT 60.245 47.826 0.00 0.00 40.25 3.41
263 284 4.020218 CCCAATGGACTGAGAACTTGTCTA 60.020 45.833 0.00 0.00 36.41 2.59
294 315 3.455910 TGAAGCTATAGCCATGTCCACTT 59.544 43.478 21.17 5.47 43.38 3.16
304 325 3.606687 CCATGTCCACTTAAGGGTACAC 58.393 50.000 5.13 0.00 0.00 2.90
390 417 2.690497 GCTGCTCATCTCCACAGTACTA 59.310 50.000 0.00 0.00 32.65 1.82
501 531 2.558359 CCACATGTTCCCTTCCTTTGTC 59.442 50.000 0.00 0.00 0.00 3.18
786 818 0.394216 TTGGTAGCCCGCGACTAGTA 60.394 55.000 8.23 0.00 0.00 1.82
791 823 3.072486 GCCCGCGACTAGTAGCCAA 62.072 63.158 20.49 0.00 0.00 4.52
811 843 0.617935 TATGGTGGCTTGCTGCTGTA 59.382 50.000 0.00 0.00 42.39 2.74
873 905 2.880890 GTCAAGCACAGACACTCCATTT 59.119 45.455 0.00 0.00 36.06 2.32
894 926 3.946606 TGACATGCAACATCTGATGTCT 58.053 40.909 22.47 10.84 44.07 3.41
900 932 5.675684 TGCAACATCTGATGTCTAGGTTA 57.324 39.130 22.47 4.24 44.07 2.85
1078 1110 3.057526 GTGGTTAAACATTGGTCCTGAGC 60.058 47.826 0.00 0.00 0.00 4.26
1153 1185 2.360801 GAGAGGAGGAAGATCAAGACGG 59.639 54.545 0.00 0.00 0.00 4.79
1173 1205 5.385198 ACGGGGCAAGTTAATAATGATGAT 58.615 37.500 0.00 0.00 0.00 2.45
1315 1347 2.703007 GCCCTGACATGGATCTTCTACT 59.297 50.000 0.20 0.00 0.00 2.57
1316 1348 3.494048 GCCCTGACATGGATCTTCTACTG 60.494 52.174 0.20 0.00 0.00 2.74
1350 1382 5.902613 ACCCTAACATTGTGTCAATCATG 57.097 39.130 0.00 0.00 0.00 3.07
1424 1456 1.609208 ATGGTGATATTTGAGCCGGC 58.391 50.000 21.89 21.89 0.00 6.13
1447 1479 5.238214 GCTGAGACCAAATCTTTAGCCTATG 59.762 44.000 0.00 0.00 39.90 2.23
1620 1653 1.774856 GGCATATGGGGTAAGGACTGT 59.225 52.381 4.56 0.00 0.00 3.55
1657 1690 1.693627 TAGGTGGCTCTCGAAGGATC 58.306 55.000 0.00 0.00 0.00 3.36
1743 1776 1.588139 CGGTAAGGACATCGCGGTC 60.588 63.158 6.13 6.62 37.06 4.79
1798 1831 3.489355 TGGAACTTTGATGTGCATCTGT 58.511 40.909 12.64 6.89 38.60 3.41
1932 1968 6.465948 TGTAAACGTACTTACCAACCATCAT 58.534 36.000 7.49 0.00 31.85 2.45
1954 1990 0.591170 CAGTTTTACACTGCCCACGG 59.409 55.000 0.00 0.00 46.70 4.94
2034 2070 1.686355 AAAACATCCAACCGTGCTGA 58.314 45.000 0.00 0.00 0.00 4.26
2107 2146 0.323629 TTTCCTCCAACGATCGCCTT 59.676 50.000 16.60 0.00 0.00 4.35
2108 2147 0.108329 TTCCTCCAACGATCGCCTTC 60.108 55.000 16.60 0.00 0.00 3.46
2109 2148 0.970937 TCCTCCAACGATCGCCTTCT 60.971 55.000 16.60 0.00 0.00 2.85
2120 2159 5.527033 ACGATCGCCTTCTTATTAAGTACC 58.473 41.667 16.60 0.00 0.00 3.34
2121 2160 5.068198 ACGATCGCCTTCTTATTAAGTACCA 59.932 40.000 16.60 0.00 0.00 3.25
2122 2161 5.629849 CGATCGCCTTCTTATTAAGTACCAG 59.370 44.000 0.26 0.00 0.00 4.00
2123 2162 5.927281 TCGCCTTCTTATTAAGTACCAGT 57.073 39.130 3.45 0.00 0.00 4.00
2125 2164 7.408756 TCGCCTTCTTATTAAGTACCAGTTA 57.591 36.000 3.45 0.00 0.00 2.24
2126 2165 7.839907 TCGCCTTCTTATTAAGTACCAGTTAA 58.160 34.615 3.45 0.00 0.00 2.01
2127 2166 7.761249 TCGCCTTCTTATTAAGTACCAGTTAAC 59.239 37.037 0.00 0.00 0.00 2.01
2136 2269 4.986054 AGTACCAGTTAACCAACCATGA 57.014 40.909 0.88 0.00 35.05 3.07
2179 2312 8.641498 ATTTGATAAGTAAAGGGGAGCATATG 57.359 34.615 0.00 0.00 0.00 1.78
2184 2317 4.047883 AGTAAAGGGGAGCATATGTTCCT 58.952 43.478 30.51 17.63 43.85 3.36
2194 2328 5.832539 AGCATATGTTCCTGCTAGGTTAT 57.167 39.130 4.29 0.39 46.49 1.89
2242 2376 2.147958 TGAGGTGTACAATTTGTCGCC 58.852 47.619 5.07 12.90 32.24 5.54
2259 2393 1.473965 CGCCAACTGATGCATCCTACT 60.474 52.381 23.67 3.17 0.00 2.57
2260 2394 2.216898 GCCAACTGATGCATCCTACTC 58.783 52.381 23.67 0.00 0.00 2.59
2261 2395 2.843701 CCAACTGATGCATCCTACTCC 58.156 52.381 23.67 0.00 0.00 3.85
2262 2396 2.437281 CCAACTGATGCATCCTACTCCT 59.563 50.000 23.67 0.00 0.00 3.69
2263 2397 3.643320 CCAACTGATGCATCCTACTCCTA 59.357 47.826 23.67 1.56 0.00 2.94
2264 2398 4.502259 CCAACTGATGCATCCTACTCCTAC 60.502 50.000 23.67 0.00 0.00 3.18
2265 2399 3.235200 ACTGATGCATCCTACTCCTACC 58.765 50.000 23.67 0.00 0.00 3.18
2266 2400 3.116939 ACTGATGCATCCTACTCCTACCT 60.117 47.826 23.67 0.00 0.00 3.08
2267 2401 3.234353 TGATGCATCCTACTCCTACCTG 58.766 50.000 23.67 0.00 0.00 4.00
2276 2410 7.094118 GCATCCTACTCCTACCTGAGTAATAAG 60.094 44.444 2.88 0.00 44.83 1.73
2280 2414 7.608761 CCTACTCCTACCTGAGTAATAAGCTAG 59.391 44.444 2.88 0.00 44.83 3.42
2283 2417 7.668052 ACTCCTACCTGAGTAATAAGCTAGATG 59.332 40.741 0.00 0.00 43.65 2.90
2288 2422 7.527796 ACCTGAGTAATAAGCTAGATGACCTA 58.472 38.462 0.00 0.00 0.00 3.08
2314 2448 7.888021 AGTCAAGGATACAAACATTTATGGTGA 59.112 33.333 3.56 0.00 41.41 4.02
2318 2453 9.693739 AAGGATACAAACATTTATGGTGATGTA 57.306 29.630 3.56 0.36 35.46 2.29
2333 2468 3.619929 GTGATGTACCGAACCATGGTTAC 59.380 47.826 29.89 23.03 40.96 2.50
2342 2477 6.285990 ACCGAACCATGGTTACAACTATATC 58.714 40.000 29.89 12.53 38.60 1.63
2344 2479 6.990349 CCGAACCATGGTTACAACTATATCTT 59.010 38.462 29.89 2.50 38.60 2.40
2345 2480 7.497909 CCGAACCATGGTTACAACTATATCTTT 59.502 37.037 29.89 1.75 38.60 2.52
2346 2481 9.537192 CGAACCATGGTTACAACTATATCTTTA 57.463 33.333 29.89 0.00 38.60 1.85
2372 2507 7.775053 TTAGGCTTTTTGAACATTCATACCT 57.225 32.000 0.00 1.91 37.00 3.08
2380 2515 5.772393 TGAACATTCATACCTTACCCACT 57.228 39.130 0.00 0.00 31.01 4.00
2388 2523 2.951229 ACCTTACCCACTTGGACTTG 57.049 50.000 0.00 0.00 37.39 3.16
2421 2556 9.125906 GATCAAATTGCATAATAACTCTCATGC 57.874 33.333 0.00 0.00 43.22 4.06
2422 2557 7.428020 TCAAATTGCATAATAACTCTCATGCC 58.572 34.615 3.21 0.00 42.45 4.40
2423 2558 6.964807 AATTGCATAATAACTCTCATGCCA 57.035 33.333 3.21 0.00 42.45 4.92
2424 2559 6.964807 ATTGCATAATAACTCTCATGCCAA 57.035 33.333 3.21 0.00 42.45 4.52
2425 2560 6.964807 TTGCATAATAACTCTCATGCCAAT 57.035 33.333 3.21 0.00 42.45 3.16
2426 2561 6.564709 TGCATAATAACTCTCATGCCAATC 57.435 37.500 3.21 0.00 42.45 2.67
2427 2562 5.179929 TGCATAATAACTCTCATGCCAATCG 59.820 40.000 3.21 0.00 42.45 3.34
2428 2563 5.391310 GCATAATAACTCTCATGCCAATCGG 60.391 44.000 0.00 0.00 38.24 4.18
2441 2576 1.257936 CCAATCGGCGTATTGTTCTCG 59.742 52.381 21.66 9.45 35.48 4.04
2442 2577 1.924524 CAATCGGCGTATTGTTCTCGT 59.075 47.619 17.88 0.00 33.11 4.18
2443 2578 2.288961 ATCGGCGTATTGTTCTCGTT 57.711 45.000 6.85 0.00 0.00 3.85
2444 2579 1.342555 TCGGCGTATTGTTCTCGTTG 58.657 50.000 6.85 0.00 0.00 4.10
2445 2580 0.368907 CGGCGTATTGTTCTCGTTGG 59.631 55.000 0.00 0.00 0.00 3.77
2446 2581 0.096454 GGCGTATTGTTCTCGTTGGC 59.904 55.000 0.00 0.00 0.00 4.52
2447 2582 0.793861 GCGTATTGTTCTCGTTGGCA 59.206 50.000 0.00 0.00 0.00 4.92
2448 2583 1.195900 GCGTATTGTTCTCGTTGGCAA 59.804 47.619 0.00 0.00 0.00 4.52
2449 2584 2.159572 GCGTATTGTTCTCGTTGGCAAT 60.160 45.455 1.92 0.00 35.90 3.56
2450 2585 3.669557 GCGTATTGTTCTCGTTGGCAATT 60.670 43.478 1.92 0.00 34.05 2.32
2451 2586 4.436317 GCGTATTGTTCTCGTTGGCAATTA 60.436 41.667 1.92 0.00 34.05 1.40
2452 2587 5.255596 CGTATTGTTCTCGTTGGCAATTAG 58.744 41.667 1.92 4.26 34.05 1.73
2453 2588 5.062934 CGTATTGTTCTCGTTGGCAATTAGA 59.937 40.000 1.92 6.80 34.05 2.10
2454 2589 6.238103 CGTATTGTTCTCGTTGGCAATTAGAT 60.238 38.462 1.92 0.00 34.05 1.98
2455 2590 4.944962 TGTTCTCGTTGGCAATTAGATG 57.055 40.909 1.92 0.00 0.00 2.90
2456 2591 4.574892 TGTTCTCGTTGGCAATTAGATGA 58.425 39.130 1.92 1.73 0.00 2.92
2457 2592 5.185454 TGTTCTCGTTGGCAATTAGATGAT 58.815 37.500 1.92 0.00 0.00 2.45
2458 2593 5.294306 TGTTCTCGTTGGCAATTAGATGATC 59.706 40.000 1.92 0.00 0.00 2.92
2459 2594 4.051237 TCTCGTTGGCAATTAGATGATCG 58.949 43.478 1.92 0.00 0.00 3.69
2460 2595 2.543848 TCGTTGGCAATTAGATGATCGC 59.456 45.455 1.92 0.00 0.00 4.58
2461 2596 2.545526 CGTTGGCAATTAGATGATCGCT 59.454 45.455 1.92 0.00 0.00 4.93
2462 2597 3.740832 CGTTGGCAATTAGATGATCGCTA 59.259 43.478 1.92 0.00 0.00 4.26
2463 2598 4.143242 CGTTGGCAATTAGATGATCGCTAG 60.143 45.833 1.92 0.00 0.00 3.42
2464 2599 4.607293 TGGCAATTAGATGATCGCTAGT 57.393 40.909 0.00 0.00 0.00 2.57
2465 2600 4.960938 TGGCAATTAGATGATCGCTAGTT 58.039 39.130 0.00 0.00 0.00 2.24
2466 2601 4.991056 TGGCAATTAGATGATCGCTAGTTC 59.009 41.667 0.00 0.00 0.00 3.01
2467 2602 4.390297 GGCAATTAGATGATCGCTAGTTCC 59.610 45.833 0.00 3.56 0.00 3.62
2468 2603 5.233988 GCAATTAGATGATCGCTAGTTCCT 58.766 41.667 0.00 0.00 0.00 3.36
2469 2604 5.119898 GCAATTAGATGATCGCTAGTTCCTG 59.880 44.000 0.00 0.00 0.00 3.86
2470 2605 6.219473 CAATTAGATGATCGCTAGTTCCTGT 58.781 40.000 0.00 0.00 0.00 4.00
2471 2606 5.854010 TTAGATGATCGCTAGTTCCTGTT 57.146 39.130 0.00 0.00 0.00 3.16
2472 2607 4.744795 AGATGATCGCTAGTTCCTGTTT 57.255 40.909 0.00 0.00 0.00 2.83
2473 2608 5.854010 AGATGATCGCTAGTTCCTGTTTA 57.146 39.130 0.00 0.00 0.00 2.01
2474 2609 6.412362 AGATGATCGCTAGTTCCTGTTTAT 57.588 37.500 0.00 0.00 0.00 1.40
2475 2610 6.821388 AGATGATCGCTAGTTCCTGTTTATT 58.179 36.000 0.00 0.00 0.00 1.40
2476 2611 6.703607 AGATGATCGCTAGTTCCTGTTTATTG 59.296 38.462 0.00 0.00 0.00 1.90
2477 2612 5.972935 TGATCGCTAGTTCCTGTTTATTGA 58.027 37.500 0.00 0.00 0.00 2.57
2478 2613 6.042777 TGATCGCTAGTTCCTGTTTATTGAG 58.957 40.000 0.00 0.00 0.00 3.02
2479 2614 4.181578 TCGCTAGTTCCTGTTTATTGAGC 58.818 43.478 0.00 0.00 0.00 4.26
2480 2615 3.932710 CGCTAGTTCCTGTTTATTGAGCA 59.067 43.478 0.00 0.00 0.00 4.26
2481 2616 4.033358 CGCTAGTTCCTGTTTATTGAGCAG 59.967 45.833 0.00 0.00 36.45 4.24
2482 2617 4.938226 GCTAGTTCCTGTTTATTGAGCAGT 59.062 41.667 0.00 0.00 35.04 4.40
2483 2618 5.163814 GCTAGTTCCTGTTTATTGAGCAGTG 60.164 44.000 0.00 0.00 35.04 3.66
2484 2619 3.503748 AGTTCCTGTTTATTGAGCAGTGC 59.496 43.478 7.13 7.13 35.04 4.40
2485 2620 3.423539 TCCTGTTTATTGAGCAGTGCT 57.576 42.857 19.86 19.86 43.88 4.40
2486 2621 3.754965 TCCTGTTTATTGAGCAGTGCTT 58.245 40.909 20.80 6.00 39.88 3.91
2487 2622 4.144297 TCCTGTTTATTGAGCAGTGCTTT 58.856 39.130 20.80 10.06 39.88 3.51
2488 2623 4.584325 TCCTGTTTATTGAGCAGTGCTTTT 59.416 37.500 20.80 9.70 39.88 2.27
2489 2624 5.767665 TCCTGTTTATTGAGCAGTGCTTTTA 59.232 36.000 20.80 8.14 39.88 1.52
2490 2625 5.858581 CCTGTTTATTGAGCAGTGCTTTTAC 59.141 40.000 20.80 6.85 39.88 2.01
2491 2626 5.448438 TGTTTATTGAGCAGTGCTTTTACG 58.552 37.500 20.80 0.00 39.88 3.18
2492 2627 5.008217 TGTTTATTGAGCAGTGCTTTTACGT 59.992 36.000 20.80 5.45 39.88 3.57
2493 2628 3.542712 ATTGAGCAGTGCTTTTACGTG 57.457 42.857 20.80 0.00 39.88 4.49
2494 2629 0.586319 TGAGCAGTGCTTTTACGTGC 59.414 50.000 20.80 4.04 39.88 5.34
2495 2630 0.110192 GAGCAGTGCTTTTACGTGCC 60.110 55.000 20.80 0.00 39.88 5.01
2496 2631 1.440353 GCAGTGCTTTTACGTGCCG 60.440 57.895 8.18 0.00 0.00 5.69
2497 2632 1.206578 CAGTGCTTTTACGTGCCGG 59.793 57.895 0.00 0.00 0.00 6.13
2498 2633 2.127003 GTGCTTTTACGTGCCGGC 60.127 61.111 22.73 22.73 0.00 6.13
2499 2634 2.592001 TGCTTTTACGTGCCGGCA 60.592 55.556 29.03 29.03 0.00 5.69
2500 2635 1.969064 TGCTTTTACGTGCCGGCAT 60.969 52.632 35.23 21.11 0.00 4.40
2501 2636 1.514014 GCTTTTACGTGCCGGCATG 60.514 57.895 40.35 40.35 38.78 4.06
2502 2637 1.136565 CTTTTACGTGCCGGCATGG 59.863 57.895 42.89 33.45 42.50 3.66
2503 2638 1.582610 CTTTTACGTGCCGGCATGGT 61.583 55.000 42.89 36.40 41.21 3.55
2504 2639 1.579084 TTTTACGTGCCGGCATGGTC 61.579 55.000 42.89 26.12 41.21 4.02
2505 2640 4.805231 TACGTGCCGGCATGGTCG 62.805 66.667 42.89 35.95 41.21 4.79
2515 2650 3.461773 CATGGTCGTCCGGCCTCT 61.462 66.667 12.04 0.00 41.25 3.69
2516 2651 3.148279 ATGGTCGTCCGGCCTCTC 61.148 66.667 12.04 0.00 41.25 3.20
2519 2654 3.519930 GTCGTCCGGCCTCTCCTC 61.520 72.222 0.00 0.00 0.00 3.71
2523 2658 4.816984 TCCGGCCTCTCCTCGGTC 62.817 72.222 0.00 0.00 43.75 4.79
2527 2662 4.200283 GCCTCTCCTCGGTCGCTG 62.200 72.222 0.00 0.00 0.00 5.18
2528 2663 3.522731 CCTCTCCTCGGTCGCTGG 61.523 72.222 0.00 0.00 0.00 4.85
2529 2664 2.438614 CTCTCCTCGGTCGCTGGA 60.439 66.667 5.27 5.27 0.00 3.86
2530 2665 2.035155 TCTCCTCGGTCGCTGGAA 59.965 61.111 6.45 0.00 0.00 3.53
2531 2666 1.999071 CTCTCCTCGGTCGCTGGAAG 61.999 65.000 6.45 4.49 0.00 3.46
2542 2677 3.190878 CTGGAAGCAATCGCCACC 58.809 61.111 0.00 0.00 39.83 4.61
2543 2678 1.675310 CTGGAAGCAATCGCCACCA 60.675 57.895 0.00 0.00 40.14 4.17
2544 2679 1.675310 TGGAAGCAATCGCCACCAG 60.675 57.895 0.00 0.00 38.41 4.00
2545 2680 2.409870 GGAAGCAATCGCCACCAGG 61.410 63.158 0.00 0.00 39.83 4.45
2546 2681 1.675641 GAAGCAATCGCCACCAGGT 60.676 57.895 0.00 0.00 39.83 4.00
2547 2682 1.648467 GAAGCAATCGCCACCAGGTC 61.648 60.000 0.00 0.00 39.83 3.85
2548 2683 2.359850 GCAATCGCCACCAGGTCA 60.360 61.111 0.00 0.00 37.19 4.02
2549 2684 1.971167 GCAATCGCCACCAGGTCAA 60.971 57.895 0.00 0.00 37.19 3.18
2550 2685 1.926511 GCAATCGCCACCAGGTCAAG 61.927 60.000 0.00 0.00 37.19 3.02
2551 2686 0.606401 CAATCGCCACCAGGTCAAGT 60.606 55.000 0.00 0.00 37.19 3.16
2552 2687 0.321653 AATCGCCACCAGGTCAAGTC 60.322 55.000 0.00 0.00 37.19 3.01
2553 2688 1.480212 ATCGCCACCAGGTCAAGTCA 61.480 55.000 0.00 0.00 37.19 3.41
2554 2689 1.669115 CGCCACCAGGTCAAGTCAG 60.669 63.158 0.00 0.00 37.19 3.51
2555 2690 1.968540 GCCACCAGGTCAAGTCAGC 60.969 63.158 0.00 0.00 37.19 4.26
2556 2691 1.757306 CCACCAGGTCAAGTCAGCT 59.243 57.895 0.00 0.00 0.00 4.24
2557 2692 0.109342 CCACCAGGTCAAGTCAGCTT 59.891 55.000 0.00 0.00 34.82 3.74
2558 2693 1.477558 CCACCAGGTCAAGTCAGCTTT 60.478 52.381 0.00 0.00 31.49 3.51
2559 2694 1.876156 CACCAGGTCAAGTCAGCTTTC 59.124 52.381 0.00 0.00 31.49 2.62
2560 2695 1.490490 ACCAGGTCAAGTCAGCTTTCA 59.510 47.619 0.00 0.00 31.49 2.69
2561 2696 2.107204 ACCAGGTCAAGTCAGCTTTCAT 59.893 45.455 0.00 0.00 31.49 2.57
2562 2697 3.152341 CCAGGTCAAGTCAGCTTTCATT 58.848 45.455 0.00 0.00 31.49 2.57
2563 2698 3.190118 CCAGGTCAAGTCAGCTTTCATTC 59.810 47.826 0.00 0.00 31.49 2.67
2564 2699 3.817084 CAGGTCAAGTCAGCTTTCATTCA 59.183 43.478 0.00 0.00 31.49 2.57
2565 2700 3.817647 AGGTCAAGTCAGCTTTCATTCAC 59.182 43.478 0.00 0.00 31.49 3.18
2566 2701 3.057946 GGTCAAGTCAGCTTTCATTCACC 60.058 47.826 0.00 0.00 31.49 4.02
2567 2702 3.817647 GTCAAGTCAGCTTTCATTCACCT 59.182 43.478 0.00 0.00 31.49 4.00
2568 2703 3.817084 TCAAGTCAGCTTTCATTCACCTG 59.183 43.478 0.00 0.00 31.49 4.00
2569 2704 2.157738 AGTCAGCTTTCATTCACCTGC 58.842 47.619 0.00 0.00 0.00 4.85
2570 2705 1.200948 GTCAGCTTTCATTCACCTGCC 59.799 52.381 0.00 0.00 0.00 4.85
2571 2706 1.074405 TCAGCTTTCATTCACCTGCCT 59.926 47.619 0.00 0.00 0.00 4.75
2572 2707 1.201647 CAGCTTTCATTCACCTGCCTG 59.798 52.381 0.00 0.00 0.00 4.85
2573 2708 0.108945 GCTTTCATTCACCTGCCTGC 60.109 55.000 0.00 0.00 0.00 4.85
2574 2709 0.529378 CTTTCATTCACCTGCCTGCC 59.471 55.000 0.00 0.00 0.00 4.85
2575 2710 0.178967 TTTCATTCACCTGCCTGCCA 60.179 50.000 0.00 0.00 0.00 4.92
2576 2711 0.178967 TTCATTCACCTGCCTGCCAA 60.179 50.000 0.00 0.00 0.00 4.52
2577 2712 0.609957 TCATTCACCTGCCTGCCAAG 60.610 55.000 0.00 0.00 0.00 3.61
2578 2713 0.896940 CATTCACCTGCCTGCCAAGT 60.897 55.000 0.00 0.00 0.00 3.16
2579 2714 0.896940 ATTCACCTGCCTGCCAAGTG 60.897 55.000 0.00 0.00 37.25 3.16
2580 2715 3.677648 CACCTGCCTGCCAAGTGC 61.678 66.667 0.00 0.00 41.77 4.40
2581 2716 3.894638 ACCTGCCTGCCAAGTGCT 61.895 61.111 0.00 0.00 42.00 4.40
2582 2717 2.352422 CCTGCCTGCCAAGTGCTA 59.648 61.111 0.00 0.00 42.00 3.49
2583 2718 1.748122 CCTGCCTGCCAAGTGCTAG 60.748 63.158 0.00 0.00 42.00 3.42
2584 2719 1.002868 CTGCCTGCCAAGTGCTAGT 60.003 57.895 0.00 0.00 42.00 2.57
2585 2720 1.302752 TGCCTGCCAAGTGCTAGTG 60.303 57.895 0.00 0.00 42.00 2.74
2586 2721 1.302832 GCCTGCCAAGTGCTAGTGT 60.303 57.895 0.00 0.00 42.00 3.55
2587 2722 0.890996 GCCTGCCAAGTGCTAGTGTT 60.891 55.000 0.00 0.00 42.00 3.32
2588 2723 1.609208 CCTGCCAAGTGCTAGTGTTT 58.391 50.000 0.00 0.00 42.00 2.83
2589 2724 2.778299 CCTGCCAAGTGCTAGTGTTTA 58.222 47.619 0.00 0.00 42.00 2.01
2590 2725 3.347216 CCTGCCAAGTGCTAGTGTTTAT 58.653 45.455 0.00 0.00 42.00 1.40
2591 2726 3.127548 CCTGCCAAGTGCTAGTGTTTATG 59.872 47.826 0.00 0.00 42.00 1.90
2592 2727 2.487762 TGCCAAGTGCTAGTGTTTATGC 59.512 45.455 0.00 0.00 42.00 3.14
2593 2728 2.159379 GCCAAGTGCTAGTGTTTATGCC 60.159 50.000 0.00 0.00 36.87 4.40
2594 2729 2.423538 CCAAGTGCTAGTGTTTATGCCC 59.576 50.000 0.00 0.00 0.00 5.36
2595 2730 3.081061 CAAGTGCTAGTGTTTATGCCCA 58.919 45.455 0.00 0.00 0.00 5.36
2596 2731 3.652057 AGTGCTAGTGTTTATGCCCAT 57.348 42.857 0.00 0.00 0.00 4.00
2597 2732 4.771114 AGTGCTAGTGTTTATGCCCATA 57.229 40.909 0.00 0.00 0.00 2.74
2598 2733 5.110814 AGTGCTAGTGTTTATGCCCATAA 57.889 39.130 0.00 0.00 0.00 1.90
2599 2734 5.126067 AGTGCTAGTGTTTATGCCCATAAG 58.874 41.667 1.50 0.00 35.02 1.73
2600 2735 4.275936 GTGCTAGTGTTTATGCCCATAAGG 59.724 45.833 1.50 0.00 35.02 2.69
2601 2736 4.080015 TGCTAGTGTTTATGCCCATAAGGT 60.080 41.667 1.50 0.00 38.26 3.50
2602 2737 4.887655 GCTAGTGTTTATGCCCATAAGGTT 59.112 41.667 1.50 0.00 38.26 3.50
2603 2738 5.008712 GCTAGTGTTTATGCCCATAAGGTTC 59.991 44.000 1.50 0.00 38.26 3.62
2604 2739 4.929479 AGTGTTTATGCCCATAAGGTTCA 58.071 39.130 1.50 0.00 38.26 3.18
2605 2740 5.518865 AGTGTTTATGCCCATAAGGTTCAT 58.481 37.500 1.50 0.00 38.26 2.57
2606 2741 5.957774 AGTGTTTATGCCCATAAGGTTCATT 59.042 36.000 1.50 0.00 38.26 2.57
2607 2742 6.096846 AGTGTTTATGCCCATAAGGTTCATTC 59.903 38.462 1.50 0.00 38.26 2.67
2608 2743 5.362430 TGTTTATGCCCATAAGGTTCATTCC 59.638 40.000 1.50 0.00 38.26 3.01
2609 2744 3.686227 ATGCCCATAAGGTTCATTCCA 57.314 42.857 0.00 0.00 38.26 3.53
2610 2745 2.733956 TGCCCATAAGGTTCATTCCAC 58.266 47.619 0.00 0.00 38.26 4.02
2611 2746 2.311542 TGCCCATAAGGTTCATTCCACT 59.688 45.455 0.00 0.00 38.26 4.00
2612 2747 2.689983 GCCCATAAGGTTCATTCCACTG 59.310 50.000 0.00 0.00 38.26 3.66
2613 2748 2.689983 CCCATAAGGTTCATTCCACTGC 59.310 50.000 0.00 0.00 0.00 4.40
2614 2749 2.355756 CCATAAGGTTCATTCCACTGCG 59.644 50.000 0.00 0.00 0.00 5.18
2615 2750 3.270027 CATAAGGTTCATTCCACTGCGA 58.730 45.455 0.00 0.00 0.00 5.10
2616 2751 1.523758 AAGGTTCATTCCACTGCGAC 58.476 50.000 0.00 0.00 0.00 5.19
2617 2752 0.321653 AGGTTCATTCCACTGCGACC 60.322 55.000 0.00 0.00 0.00 4.79
2618 2753 0.321653 GGTTCATTCCACTGCGACCT 60.322 55.000 0.00 0.00 0.00 3.85
2619 2754 1.066430 GGTTCATTCCACTGCGACCTA 60.066 52.381 0.00 0.00 0.00 3.08
2620 2755 2.420129 GGTTCATTCCACTGCGACCTAT 60.420 50.000 0.00 0.00 0.00 2.57
2621 2756 2.866762 GTTCATTCCACTGCGACCTATC 59.133 50.000 0.00 0.00 0.00 2.08
2622 2757 2.388735 TCATTCCACTGCGACCTATCT 58.611 47.619 0.00 0.00 0.00 1.98
2623 2758 3.562182 TCATTCCACTGCGACCTATCTA 58.438 45.455 0.00 0.00 0.00 1.98
2624 2759 3.570125 TCATTCCACTGCGACCTATCTAG 59.430 47.826 0.00 0.00 0.00 2.43
2625 2760 1.319541 TCCACTGCGACCTATCTAGC 58.680 55.000 0.00 0.00 0.00 3.42
2626 2761 1.133761 TCCACTGCGACCTATCTAGCT 60.134 52.381 0.00 0.00 0.00 3.32
2627 2762 1.268352 CCACTGCGACCTATCTAGCTC 59.732 57.143 0.00 0.00 0.00 4.09
2628 2763 1.069568 CACTGCGACCTATCTAGCTCG 60.070 57.143 0.00 0.00 35.20 5.03
2629 2764 1.202663 ACTGCGACCTATCTAGCTCGA 60.203 52.381 6.20 0.00 34.27 4.04
2630 2765 1.463056 CTGCGACCTATCTAGCTCGAG 59.537 57.143 8.45 8.45 34.27 4.04
2631 2766 1.202663 TGCGACCTATCTAGCTCGAGT 60.203 52.381 15.13 3.51 34.27 4.18
2632 2767 2.036862 TGCGACCTATCTAGCTCGAGTA 59.963 50.000 15.13 4.55 34.27 2.59
2633 2768 2.412770 GCGACCTATCTAGCTCGAGTAC 59.587 54.545 15.13 0.00 34.27 2.73
2634 2769 3.861886 GCGACCTATCTAGCTCGAGTACT 60.862 52.174 15.13 6.03 34.27 2.73
2635 2770 4.617995 GCGACCTATCTAGCTCGAGTACTA 60.618 50.000 15.13 6.94 34.27 1.82
2636 2771 5.653507 CGACCTATCTAGCTCGAGTACTAT 58.346 45.833 15.13 6.05 34.27 2.12
2637 2772 6.680131 GCGACCTATCTAGCTCGAGTACTATA 60.680 46.154 15.13 6.86 34.27 1.31
2638 2773 6.914215 CGACCTATCTAGCTCGAGTACTATAG 59.086 46.154 15.13 14.86 34.27 1.31
2639 2774 7.201723 CGACCTATCTAGCTCGAGTACTATAGA 60.202 44.444 15.13 13.44 34.27 1.98
2640 2775 7.775120 ACCTATCTAGCTCGAGTACTATAGAC 58.225 42.308 15.13 0.59 0.00 2.59
2641 2776 7.396907 ACCTATCTAGCTCGAGTACTATAGACA 59.603 40.741 15.13 3.48 0.00 3.41
2642 2777 7.919091 CCTATCTAGCTCGAGTACTATAGACAG 59.081 44.444 15.13 11.69 0.00 3.51
2643 2778 6.653526 TCTAGCTCGAGTACTATAGACAGT 57.346 41.667 15.13 0.00 0.00 3.55
2644 2779 6.448852 TCTAGCTCGAGTACTATAGACAGTG 58.551 44.000 15.13 0.00 0.00 3.66
2645 2780 5.279255 AGCTCGAGTACTATAGACAGTGA 57.721 43.478 15.13 0.00 0.00 3.41
2646 2781 5.051816 AGCTCGAGTACTATAGACAGTGAC 58.948 45.833 15.13 0.00 0.00 3.67
2647 2782 4.211794 GCTCGAGTACTATAGACAGTGACC 59.788 50.000 15.13 0.00 0.00 4.02
2648 2783 5.349061 TCGAGTACTATAGACAGTGACCA 57.651 43.478 6.78 0.00 0.00 4.02
2649 2784 5.358090 TCGAGTACTATAGACAGTGACCAG 58.642 45.833 6.78 0.00 0.00 4.00
2650 2785 4.024725 CGAGTACTATAGACAGTGACCAGC 60.025 50.000 6.78 0.00 0.00 4.85
2651 2786 4.208746 AGTACTATAGACAGTGACCAGCC 58.791 47.826 6.78 0.00 0.00 4.85
2652 2787 3.101643 ACTATAGACAGTGACCAGCCA 57.898 47.619 6.78 0.00 0.00 4.75
2653 2788 3.441101 ACTATAGACAGTGACCAGCCAA 58.559 45.455 6.78 0.00 0.00 4.52
2654 2789 3.838317 ACTATAGACAGTGACCAGCCAAA 59.162 43.478 6.78 0.00 0.00 3.28
2655 2790 2.543777 TAGACAGTGACCAGCCAAAC 57.456 50.000 0.00 0.00 0.00 2.93
2656 2791 0.546122 AGACAGTGACCAGCCAAACA 59.454 50.000 0.00 0.00 0.00 2.83
2657 2792 0.663153 GACAGTGACCAGCCAAACAC 59.337 55.000 0.00 0.00 0.00 3.32
2658 2793 0.255890 ACAGTGACCAGCCAAACACT 59.744 50.000 0.00 0.00 43.05 3.55
2659 2794 3.100545 AGTGACCAGCCAAACACTG 57.899 52.632 0.00 0.00 41.16 3.66
2667 2802 3.659850 GCCAAACACTGGGTTTCAC 57.340 52.632 4.78 0.00 46.61 3.18
2668 2803 0.820871 GCCAAACACTGGGTTTCACA 59.179 50.000 4.78 0.00 46.61 3.58
2669 2804 1.205893 GCCAAACACTGGGTTTCACAA 59.794 47.619 4.78 0.00 46.61 3.33
2670 2805 2.158971 GCCAAACACTGGGTTTCACAAT 60.159 45.455 4.78 0.00 46.61 2.71
2671 2806 3.716601 CCAAACACTGGGTTTCACAATC 58.283 45.455 4.78 0.00 46.61 2.67
2672 2807 3.131933 CCAAACACTGGGTTTCACAATCA 59.868 43.478 4.78 0.00 46.61 2.57
2673 2808 4.382470 CCAAACACTGGGTTTCACAATCAA 60.382 41.667 4.78 0.00 46.61 2.57
2674 2809 5.174395 CAAACACTGGGTTTCACAATCAAA 58.826 37.500 4.78 0.00 46.61 2.69
2675 2810 5.413309 AACACTGGGTTTCACAATCAAAA 57.587 34.783 0.00 0.00 35.82 2.44
2676 2811 5.612725 ACACTGGGTTTCACAATCAAAAT 57.387 34.783 0.00 0.00 0.00 1.82
2677 2812 5.988287 ACACTGGGTTTCACAATCAAAATT 58.012 33.333 0.00 0.00 0.00 1.82
2678 2813 7.118496 ACACTGGGTTTCACAATCAAAATTA 57.882 32.000 0.00 0.00 0.00 1.40
2679 2814 7.734942 ACACTGGGTTTCACAATCAAAATTAT 58.265 30.769 0.00 0.00 0.00 1.28
2680 2815 7.656948 ACACTGGGTTTCACAATCAAAATTATG 59.343 33.333 0.00 0.00 0.00 1.90
2681 2816 7.118101 CACTGGGTTTCACAATCAAAATTATGG 59.882 37.037 0.00 0.00 0.00 2.74
2682 2817 7.016072 ACTGGGTTTCACAATCAAAATTATGGA 59.984 33.333 0.00 0.00 0.00 3.41
2683 2818 7.739825 TGGGTTTCACAATCAAAATTATGGAA 58.260 30.769 0.00 0.00 0.00 3.53
2684 2819 8.381636 TGGGTTTCACAATCAAAATTATGGAAT 58.618 29.630 0.00 0.00 0.00 3.01
2685 2820 9.883142 GGGTTTCACAATCAAAATTATGGAATA 57.117 29.630 0.00 0.00 0.00 1.75
2702 2837 6.989155 TGGAATAAACGAGACTATATGGGT 57.011 37.500 0.00 0.00 0.00 4.51
2703 2838 6.989659 TGGAATAAACGAGACTATATGGGTC 58.010 40.000 0.00 0.00 0.00 4.46
2704 2839 6.551975 TGGAATAAACGAGACTATATGGGTCA 59.448 38.462 11.44 0.00 36.29 4.02
2705 2840 7.070198 TGGAATAAACGAGACTATATGGGTCAA 59.930 37.037 11.44 0.00 36.29 3.18
2706 2841 7.929785 GGAATAAACGAGACTATATGGGTCAAA 59.070 37.037 11.44 0.00 36.29 2.69
2707 2842 9.321562 GAATAAACGAGACTATATGGGTCAAAA 57.678 33.333 11.44 0.00 36.29 2.44
2708 2843 9.847224 AATAAACGAGACTATATGGGTCAAAAT 57.153 29.630 11.44 0.00 36.29 1.82
2710 2845 8.658499 AAACGAGACTATATGGGTCAAAATAC 57.342 34.615 11.44 0.00 36.29 1.89
2711 2846 7.598759 ACGAGACTATATGGGTCAAAATACT 57.401 36.000 11.44 0.00 36.29 2.12
2712 2847 7.659186 ACGAGACTATATGGGTCAAAATACTC 58.341 38.462 11.44 0.00 36.29 2.59
2713 2848 7.287005 ACGAGACTATATGGGTCAAAATACTCA 59.713 37.037 11.44 0.00 36.29 3.41
2714 2849 8.307483 CGAGACTATATGGGTCAAAATACTCAT 58.693 37.037 11.44 0.00 43.11 2.90
2746 2881 8.706492 ATGTTATAAAATGTTTGCATCCACTG 57.294 30.769 0.00 0.00 33.50 3.66
2759 2894 4.778842 CATCCACTGCTACGTTATTGTC 57.221 45.455 0.00 0.00 0.00 3.18
2760 2895 3.945981 TCCACTGCTACGTTATTGTCA 57.054 42.857 0.00 0.00 0.00 3.58
2761 2896 3.845178 TCCACTGCTACGTTATTGTCAG 58.155 45.455 0.00 0.00 0.00 3.51
2762 2897 3.257375 TCCACTGCTACGTTATTGTCAGT 59.743 43.478 0.00 0.00 35.42 3.41
2763 2898 4.460034 TCCACTGCTACGTTATTGTCAGTA 59.540 41.667 0.00 0.00 33.93 2.74
2764 2899 4.561606 CCACTGCTACGTTATTGTCAGTAC 59.438 45.833 0.00 0.00 33.93 2.73
2765 2900 4.561606 CACTGCTACGTTATTGTCAGTACC 59.438 45.833 0.00 0.00 33.93 3.34
2766 2901 4.219070 ACTGCTACGTTATTGTCAGTACCA 59.781 41.667 0.00 0.00 33.56 3.25
2767 2902 4.487948 TGCTACGTTATTGTCAGTACCAC 58.512 43.478 0.00 0.00 0.00 4.16
2768 2903 3.861689 GCTACGTTATTGTCAGTACCACC 59.138 47.826 0.00 0.00 0.00 4.61
2769 2904 4.618927 GCTACGTTATTGTCAGTACCACCA 60.619 45.833 0.00 0.00 0.00 4.17
2770 2905 3.921677 ACGTTATTGTCAGTACCACCAG 58.078 45.455 0.00 0.00 0.00 4.00
2771 2906 3.259064 CGTTATTGTCAGTACCACCAGG 58.741 50.000 0.00 0.00 42.21 4.45
2781 2916 4.498346 CCACCAGGTGTTCATGCA 57.502 55.556 18.82 0.00 0.00 3.96
2782 2917 2.965805 CCACCAGGTGTTCATGCAT 58.034 52.632 18.82 0.00 0.00 3.96
2783 2918 1.259609 CCACCAGGTGTTCATGCATT 58.740 50.000 18.82 0.00 0.00 3.56
2784 2919 1.203052 CCACCAGGTGTTCATGCATTC 59.797 52.381 18.82 0.00 0.00 2.67
2785 2920 2.165167 CACCAGGTGTTCATGCATTCT 58.835 47.619 11.99 0.00 0.00 2.40
2786 2921 3.346315 CACCAGGTGTTCATGCATTCTA 58.654 45.455 11.99 0.00 0.00 2.10
2787 2922 3.758023 CACCAGGTGTTCATGCATTCTAA 59.242 43.478 11.99 0.00 0.00 2.10
2788 2923 4.400251 CACCAGGTGTTCATGCATTCTAAT 59.600 41.667 11.99 0.00 0.00 1.73
2789 2924 5.018809 ACCAGGTGTTCATGCATTCTAATT 58.981 37.500 0.00 0.00 0.00 1.40
2790 2925 5.481473 ACCAGGTGTTCATGCATTCTAATTT 59.519 36.000 0.00 0.00 0.00 1.82
2791 2926 6.663093 ACCAGGTGTTCATGCATTCTAATTTA 59.337 34.615 0.00 0.00 0.00 1.40
2792 2927 7.342799 ACCAGGTGTTCATGCATTCTAATTTAT 59.657 33.333 0.00 0.00 0.00 1.40
2793 2928 7.650504 CCAGGTGTTCATGCATTCTAATTTATG 59.349 37.037 0.00 0.00 0.00 1.90
2794 2929 8.407832 CAGGTGTTCATGCATTCTAATTTATGA 58.592 33.333 0.00 0.00 0.00 2.15
2795 2930 9.139734 AGGTGTTCATGCATTCTAATTTATGAT 57.860 29.630 0.00 0.00 0.00 2.45
2796 2931 9.188588 GGTGTTCATGCATTCTAATTTATGATG 57.811 33.333 0.00 0.00 0.00 3.07
2797 2932 9.188588 GTGTTCATGCATTCTAATTTATGATGG 57.811 33.333 0.00 0.00 0.00 3.51
2798 2933 7.868922 TGTTCATGCATTCTAATTTATGATGGC 59.131 33.333 0.00 0.00 0.00 4.40
2799 2934 7.770366 TCATGCATTCTAATTTATGATGGCT 57.230 32.000 0.00 0.00 0.00 4.75
2800 2935 8.185506 TCATGCATTCTAATTTATGATGGCTT 57.814 30.769 0.00 0.00 0.00 4.35
2801 2936 8.085909 TCATGCATTCTAATTTATGATGGCTTG 58.914 33.333 0.00 0.00 0.00 4.01
2802 2937 6.218019 TGCATTCTAATTTATGATGGCTTGC 58.782 36.000 0.00 0.00 0.00 4.01
2803 2938 6.041182 TGCATTCTAATTTATGATGGCTTGCT 59.959 34.615 0.00 0.00 0.00 3.91
2804 2939 6.365247 GCATTCTAATTTATGATGGCTTGCTG 59.635 38.462 0.00 0.00 0.00 4.41
2805 2940 7.431249 CATTCTAATTTATGATGGCTTGCTGT 58.569 34.615 0.00 0.00 0.00 4.40
2806 2941 7.408756 TTCTAATTTATGATGGCTTGCTGTT 57.591 32.000 0.00 0.00 0.00 3.16
2807 2942 6.798482 TCTAATTTATGATGGCTTGCTGTTG 58.202 36.000 0.00 0.00 0.00 3.33
2808 2943 5.664294 AATTTATGATGGCTTGCTGTTGA 57.336 34.783 0.00 0.00 0.00 3.18
2809 2944 4.707030 TTTATGATGGCTTGCTGTTGAG 57.293 40.909 0.00 0.00 0.00 3.02
2810 2945 1.471119 ATGATGGCTTGCTGTTGAGG 58.529 50.000 0.00 0.00 0.00 3.86
2811 2946 0.111061 TGATGGCTTGCTGTTGAGGT 59.889 50.000 0.00 0.00 0.00 3.85
2812 2947 0.524862 GATGGCTTGCTGTTGAGGTG 59.475 55.000 0.00 0.00 0.00 4.00
2813 2948 0.178981 ATGGCTTGCTGTTGAGGTGT 60.179 50.000 0.00 0.00 0.00 4.16
2814 2949 0.395586 TGGCTTGCTGTTGAGGTGTT 60.396 50.000 0.00 0.00 0.00 3.32
2815 2950 0.312102 GGCTTGCTGTTGAGGTGTTC 59.688 55.000 0.00 0.00 0.00 3.18
2816 2951 1.312815 GCTTGCTGTTGAGGTGTTCT 58.687 50.000 0.00 0.00 0.00 3.01
2817 2952 1.678101 GCTTGCTGTTGAGGTGTTCTT 59.322 47.619 0.00 0.00 0.00 2.52
2818 2953 2.542411 GCTTGCTGTTGAGGTGTTCTTG 60.542 50.000 0.00 0.00 0.00 3.02
2819 2954 2.418368 TGCTGTTGAGGTGTTCTTGT 57.582 45.000 0.00 0.00 0.00 3.16
2820 2955 2.016318 TGCTGTTGAGGTGTTCTTGTG 58.984 47.619 0.00 0.00 0.00 3.33
2821 2956 1.268743 GCTGTTGAGGTGTTCTTGTGC 60.269 52.381 0.00 0.00 0.00 4.57
2822 2957 2.292267 CTGTTGAGGTGTTCTTGTGCT 58.708 47.619 0.00 0.00 0.00 4.40
2823 2958 2.684881 CTGTTGAGGTGTTCTTGTGCTT 59.315 45.455 0.00 0.00 0.00 3.91
2824 2959 2.682856 TGTTGAGGTGTTCTTGTGCTTC 59.317 45.455 0.00 0.00 0.00 3.86
2825 2960 2.945668 GTTGAGGTGTTCTTGTGCTTCT 59.054 45.455 0.00 0.00 0.00 2.85
2826 2961 2.564771 TGAGGTGTTCTTGTGCTTCTG 58.435 47.619 0.00 0.00 0.00 3.02
2827 2962 1.876156 GAGGTGTTCTTGTGCTTCTGG 59.124 52.381 0.00 0.00 0.00 3.86
2828 2963 1.212935 AGGTGTTCTTGTGCTTCTGGT 59.787 47.619 0.00 0.00 0.00 4.00
2829 2964 1.334869 GGTGTTCTTGTGCTTCTGGTG 59.665 52.381 0.00 0.00 0.00 4.17
2830 2965 1.334869 GTGTTCTTGTGCTTCTGGTGG 59.665 52.381 0.00 0.00 0.00 4.61
2831 2966 0.312102 GTTCTTGTGCTTCTGGTGGC 59.688 55.000 0.00 0.00 0.00 5.01
2832 2967 0.183492 TTCTTGTGCTTCTGGTGGCT 59.817 50.000 0.00 0.00 0.00 4.75
2833 2968 0.183492 TCTTGTGCTTCTGGTGGCTT 59.817 50.000 0.00 0.00 0.00 4.35
2834 2969 1.035139 CTTGTGCTTCTGGTGGCTTT 58.965 50.000 0.00 0.00 0.00 3.51
2835 2970 1.000938 CTTGTGCTTCTGGTGGCTTTC 60.001 52.381 0.00 0.00 0.00 2.62
2836 2971 0.183492 TGTGCTTCTGGTGGCTTTCT 59.817 50.000 0.00 0.00 0.00 2.52
2837 2972 0.595095 GTGCTTCTGGTGGCTTTCTG 59.405 55.000 0.00 0.00 0.00 3.02
2838 2973 1.174712 TGCTTCTGGTGGCTTTCTGC 61.175 55.000 0.00 0.00 41.94 4.26
2839 2974 0.892814 GCTTCTGGTGGCTTTCTGCT 60.893 55.000 0.00 0.00 42.39 4.24
2840 2975 1.611673 GCTTCTGGTGGCTTTCTGCTA 60.612 52.381 0.00 0.00 42.39 3.49
2847 2982 2.276732 TGGCTTTCTGCTACTTTGCT 57.723 45.000 0.00 0.00 42.39 3.91
2848 2983 3.417069 TGGCTTTCTGCTACTTTGCTA 57.583 42.857 0.00 0.00 42.39 3.49
2849 2984 3.955471 TGGCTTTCTGCTACTTTGCTAT 58.045 40.909 0.00 0.00 42.39 2.97
2850 2985 3.941483 TGGCTTTCTGCTACTTTGCTATC 59.059 43.478 0.00 0.00 42.39 2.08
2851 2986 3.001736 GGCTTTCTGCTACTTTGCTATCG 59.998 47.826 0.00 0.00 42.39 2.92
2852 2987 3.001736 GCTTTCTGCTACTTTGCTATCGG 59.998 47.826 0.00 0.00 38.95 4.18
2853 2988 3.887621 TTCTGCTACTTTGCTATCGGT 57.112 42.857 0.00 0.00 0.00 4.69
2854 2989 4.994907 TTCTGCTACTTTGCTATCGGTA 57.005 40.909 0.00 0.00 0.00 4.02
2855 2990 4.303086 TCTGCTACTTTGCTATCGGTAC 57.697 45.455 0.00 0.00 0.00 3.34
2856 2991 3.067742 TCTGCTACTTTGCTATCGGTACC 59.932 47.826 0.16 0.16 0.00 3.34
2857 2992 2.761767 TGCTACTTTGCTATCGGTACCA 59.238 45.455 13.54 0.00 0.00 3.25
2858 2993 3.121544 GCTACTTTGCTATCGGTACCAC 58.878 50.000 13.54 0.00 0.00 4.16
2859 2994 3.181478 GCTACTTTGCTATCGGTACCACT 60.181 47.826 13.54 0.05 0.00 4.00
2860 2995 3.975168 ACTTTGCTATCGGTACCACTT 57.025 42.857 13.54 0.00 0.00 3.16
2861 2996 4.281898 ACTTTGCTATCGGTACCACTTT 57.718 40.909 13.54 0.00 0.00 2.66
2862 2997 4.648651 ACTTTGCTATCGGTACCACTTTT 58.351 39.130 13.54 0.00 0.00 2.27
2863 2998 4.454504 ACTTTGCTATCGGTACCACTTTTG 59.545 41.667 13.54 0.00 0.00 2.44
2864 2999 3.688694 TGCTATCGGTACCACTTTTGT 57.311 42.857 13.54 0.00 0.00 2.83
2865 3000 4.010667 TGCTATCGGTACCACTTTTGTT 57.989 40.909 13.54 0.00 0.00 2.83
2866 3001 4.391155 TGCTATCGGTACCACTTTTGTTT 58.609 39.130 13.54 0.00 0.00 2.83
2867 3002 5.549347 TGCTATCGGTACCACTTTTGTTTA 58.451 37.500 13.54 0.00 0.00 2.01
2868 3003 6.174760 TGCTATCGGTACCACTTTTGTTTAT 58.825 36.000 13.54 0.00 0.00 1.40
2869 3004 7.329499 TGCTATCGGTACCACTTTTGTTTATA 58.671 34.615 13.54 0.00 0.00 0.98
2870 3005 7.988599 TGCTATCGGTACCACTTTTGTTTATAT 59.011 33.333 13.54 0.00 0.00 0.86
2871 3006 8.833493 GCTATCGGTACCACTTTTGTTTATATT 58.167 33.333 13.54 0.00 0.00 1.28
2874 3009 8.851541 TCGGTACCACTTTTGTTTATATTTCT 57.148 30.769 13.54 0.00 0.00 2.52
2875 3010 8.938906 TCGGTACCACTTTTGTTTATATTTCTC 58.061 33.333 13.54 0.00 0.00 2.87
2876 3011 8.179615 CGGTACCACTTTTGTTTATATTTCTCC 58.820 37.037 13.54 0.00 0.00 3.71
2877 3012 9.016438 GGTACCACTTTTGTTTATATTTCTCCA 57.984 33.333 7.15 0.00 0.00 3.86
2880 3015 9.981114 ACCACTTTTGTTTATATTTCTCCAAAG 57.019 29.630 0.00 0.00 0.00 2.77
2881 3016 8.925700 CCACTTTTGTTTATATTTCTCCAAAGC 58.074 33.333 0.00 0.00 0.00 3.51
2882 3017 9.696917 CACTTTTGTTTATATTTCTCCAAAGCT 57.303 29.630 0.00 0.00 0.00 3.74
2883 3018 9.914131 ACTTTTGTTTATATTTCTCCAAAGCTC 57.086 29.630 0.00 0.00 0.00 4.09
2884 3019 9.912634 CTTTTGTTTATATTTCTCCAAAGCTCA 57.087 29.630 0.00 0.00 0.00 4.26
2886 3021 9.859427 TTTGTTTATATTTCTCCAAAGCTCATG 57.141 29.630 0.00 0.00 0.00 3.07
2887 3022 8.806429 TGTTTATATTTCTCCAAAGCTCATGA 57.194 30.769 0.00 0.00 0.00 3.07
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 5.347907 CGGACAAAACAAGGTACATCTACTC 59.652 44.000 0.00 0.00 0.00 2.59
37 38 2.944349 TGAACCGGACAAAACAAGGTAC 59.056 45.455 9.46 0.00 34.35 3.34
51 52 1.464997 GCTCTTAGCTTGTTGAACCGG 59.535 52.381 0.00 0.00 38.45 5.28
63 64 2.547634 GGAATTGCTAGCTGCTCTTAGC 59.452 50.000 17.23 14.42 44.01 3.09
79 80 2.225908 ACAGGGAGTAGGACAGGGAATT 60.226 50.000 0.00 0.00 0.00 2.17
111 112 1.235695 CTTAAGTTTTACACGCGCGC 58.764 50.000 32.58 23.91 0.00 6.86
112 113 2.219355 CACTTAAGTTTTACACGCGCG 58.781 47.619 30.96 30.96 0.00 6.86
113 114 3.243226 ACACTTAAGTTTTACACGCGC 57.757 42.857 5.73 0.00 0.00 6.86
114 115 4.580528 ACAACACTTAAGTTTTACACGCG 58.419 39.130 5.07 3.53 0.00 6.01
115 116 5.561993 TGACAACACTTAAGTTTTACACGC 58.438 37.500 5.07 0.00 0.00 5.34
116 117 7.403421 TCATGACAACACTTAAGTTTTACACG 58.597 34.615 5.07 3.48 0.00 4.49
125 126 7.466805 CCACATGTATCATGACAACACTTAAG 58.533 38.462 13.42 0.00 31.83 1.85
137 138 4.575645 TGTACACATGCCACATGTATCATG 59.424 41.667 25.63 25.63 41.35 3.07
144 145 1.155889 ACGTGTACACATGCCACATG 58.844 50.000 24.98 8.32 36.36 3.21
167 188 7.201767 GCAGCTCTATAGGTTTGAACATGAAAT 60.202 37.037 0.00 0.00 0.00 2.17
176 197 6.154534 TGAGTAAAGCAGCTCTATAGGTTTGA 59.845 38.462 0.00 0.00 35.04 2.69
189 210 4.858935 TGTTGATTGTTGAGTAAAGCAGC 58.141 39.130 0.00 0.00 0.00 5.25
200 221 1.464608 AGCGGTCGATGTTGATTGTTG 59.535 47.619 0.00 0.00 0.00 3.33
212 233 2.569059 ACTAATACTAGCAGCGGTCGA 58.431 47.619 0.00 0.00 0.00 4.20
240 261 3.077359 GACAAGTTCTCAGTCCATTGGG 58.923 50.000 2.09 0.00 0.00 4.12
294 315 7.895429 ACTACACACTTATTAGGTGTACCCTTA 59.105 37.037 10.83 0.70 42.73 2.69
315 336 1.903860 GGTGTGGGATGTGGTACTACA 59.096 52.381 14.91 14.91 34.63 2.74
322 343 0.329261 ATCAGTGGTGTGGGATGTGG 59.671 55.000 0.00 0.00 0.00 4.17
501 531 0.954452 GCAAGTTGTGGAGGTTGGAG 59.046 55.000 4.48 0.00 0.00 3.86
558 590 2.190313 CCATGCGCCCTGAAGCTA 59.810 61.111 4.18 0.00 0.00 3.32
589 621 1.278985 TGTGATGAAGAACCGCATCCT 59.721 47.619 0.00 0.00 40.05 3.24
702 734 1.377725 AATGGTGAAGAGGCTGCCG 60.378 57.895 13.96 0.00 0.00 5.69
811 843 1.280421 GAGGTCATTCTCCACCTTGCT 59.720 52.381 0.00 0.00 43.52 3.91
873 905 3.946606 AGACATCAGATGTTGCATGTCA 58.053 40.909 17.43 2.99 45.03 3.58
894 926 4.331968 CAGCCAGGTCAAACATTAACCTA 58.668 43.478 0.00 0.00 41.48 3.08
900 932 2.584835 TAGCAGCCAGGTCAAACATT 57.415 45.000 0.00 0.00 0.00 2.71
1040 1072 2.338809 ACCACCTCATCAGTTTCCAGA 58.661 47.619 0.00 0.00 0.00 3.86
1078 1110 2.276868 CGCCGCATTGAGCTTTCG 60.277 61.111 0.00 0.00 42.61 3.46
1153 1185 8.169977 TCTTCATCATCATTATTAACTTGCCC 57.830 34.615 0.00 0.00 0.00 5.36
1173 1205 4.536090 ACAATATCCACACCCTCTTCTTCA 59.464 41.667 0.00 0.00 0.00 3.02
1315 1347 3.916438 TAGGGTTCTGGGCGAGGCA 62.916 63.158 0.00 0.00 0.00 4.75
1316 1348 2.666098 TTAGGGTTCTGGGCGAGGC 61.666 63.158 0.00 0.00 0.00 4.70
1350 1382 1.014044 TCGGTGAGAGTTCATTGCGC 61.014 55.000 0.00 0.00 35.39 6.09
1424 1456 6.352516 ACATAGGCTAAAGATTTGGTCTCAG 58.647 40.000 0.00 0.00 35.21 3.35
1447 1479 3.933332 GTCTCATACAACACAGCCCTAAC 59.067 47.826 0.00 0.00 0.00 2.34
1458 1490 5.140747 ACAACCTGAGAGTCTCATACAAC 57.859 43.478 22.90 0.00 39.92 3.32
1491 1523 1.178276 CCGTCTTGAGCTCAGTAGGT 58.822 55.000 17.43 0.00 35.73 3.08
1560 1592 5.829924 GGAATGGAGAGAAATAAAGATGGCA 59.170 40.000 0.00 0.00 0.00 4.92
1599 1631 2.057922 CAGTCCTTACCCCATATGCCT 58.942 52.381 0.00 0.00 0.00 4.75
1620 1653 5.314529 CACCTATCTGGGTTATAGTCGAGA 58.685 45.833 0.00 0.00 41.11 4.04
1657 1690 2.370281 ACATACCTCAGACTGTTGCG 57.630 50.000 1.59 0.00 0.00 4.85
1743 1776 0.857287 CGACCGTCATCATCTGCATG 59.143 55.000 0.00 0.00 0.00 4.06
1758 1791 0.172803 ATAGTGTTGAGGCGACGACC 59.827 55.000 0.00 0.00 0.00 4.79
1798 1831 0.251121 TCGATGCTTTGCCCTTCCAA 60.251 50.000 0.00 0.00 0.00 3.53
2021 2057 2.552599 TAAATGTCAGCACGGTTGGA 57.447 45.000 0.00 0.00 0.00 3.53
2027 2063 6.855914 ACAACAAAGTAATAAATGTCAGCACG 59.144 34.615 0.00 0.00 0.00 5.34
2099 2138 6.514063 ACTGGTACTTAATAAGAAGGCGATC 58.486 40.000 7.06 0.00 0.00 3.69
2107 2146 8.658619 TGGTTGGTTAACTGGTACTTAATAAGA 58.341 33.333 7.06 0.00 36.99 2.10
2108 2147 8.851541 TGGTTGGTTAACTGGTACTTAATAAG 57.148 34.615 5.42 0.00 36.99 1.73
2109 2148 9.233649 CATGGTTGGTTAACTGGTACTTAATAA 57.766 33.333 5.42 0.00 36.99 1.40
2146 2279 9.895138 TCCCCTTTACTTATCAAATAGTGTAAC 57.105 33.333 0.00 0.00 0.00 2.50
2179 2312 7.767745 GTGTAACTAATAACCTAGCAGGAAC 57.232 40.000 8.91 0.00 37.67 3.62
2218 2352 4.851558 GCGACAAATTGTACACCTCATTTC 59.148 41.667 0.00 0.00 0.00 2.17
2242 2376 3.834489 AGGAGTAGGATGCATCAGTTG 57.166 47.619 27.25 0.00 0.00 3.16
2259 2393 7.666388 GTCATCTAGCTTATTACTCAGGTAGGA 59.334 40.741 0.00 0.00 40.21 2.94
2260 2394 7.094118 GGTCATCTAGCTTATTACTCAGGTAGG 60.094 44.444 0.00 0.00 40.21 3.18
2261 2395 7.668052 AGGTCATCTAGCTTATTACTCAGGTAG 59.332 40.741 0.00 0.00 40.86 3.18
2262 2396 7.527796 AGGTCATCTAGCTTATTACTCAGGTA 58.472 38.462 0.00 0.00 29.36 3.08
2263 2397 6.377912 AGGTCATCTAGCTTATTACTCAGGT 58.622 40.000 0.00 0.00 29.36 4.00
2264 2398 6.909550 AGGTCATCTAGCTTATTACTCAGG 57.090 41.667 0.00 0.00 29.36 3.86
2280 2414 6.640518 TGTTTGTATCCTTGACTAGGTCATC 58.359 40.000 2.75 0.00 42.40 2.92
2283 2417 7.923414 AAATGTTTGTATCCTTGACTAGGTC 57.077 36.000 2.75 0.00 45.03 3.85
2288 2422 7.888021 TCACCATAAATGTTTGTATCCTTGACT 59.112 33.333 0.00 0.00 0.00 3.41
2307 2441 7.819560 TAACCATGGTTCGGTACATCACCATA 61.820 42.308 33.06 7.44 46.36 2.74
2314 2448 3.985019 TGTAACCATGGTTCGGTACAT 57.015 42.857 33.06 10.12 39.31 2.29
2318 2453 2.943036 AGTTGTAACCATGGTTCGGT 57.057 45.000 33.06 12.92 39.31 4.69
2346 2481 8.815912 AGGTATGAATGTTCAAAAAGCCTAATT 58.184 29.630 0.00 0.00 41.13 1.40
2347 2482 8.366359 AGGTATGAATGTTCAAAAAGCCTAAT 57.634 30.769 0.00 0.00 41.13 1.73
2357 2492 6.134535 AGTGGGTAAGGTATGAATGTTCAA 57.865 37.500 0.00 0.00 41.13 2.69
2370 2505 1.202879 TGCAAGTCCAAGTGGGTAAGG 60.203 52.381 0.00 0.00 38.11 2.69
2371 2506 2.270352 TGCAAGTCCAAGTGGGTAAG 57.730 50.000 0.00 0.00 38.11 2.34
2372 2507 2.969821 ATGCAAGTCCAAGTGGGTAA 57.030 45.000 0.00 0.00 38.11 2.85
2380 2515 6.591062 GCAATTTGATCTTAATGCAAGTCCAA 59.409 34.615 0.00 0.00 35.58 3.53
2421 2556 1.257936 CGAGAACAATACGCCGATTGG 59.742 52.381 11.84 0.00 40.50 3.16
2422 2557 1.924524 ACGAGAACAATACGCCGATTG 59.075 47.619 0.00 0.00 41.69 2.67
2423 2558 2.288961 ACGAGAACAATACGCCGATT 57.711 45.000 0.00 0.00 0.00 3.34
2424 2559 1.924524 CAACGAGAACAATACGCCGAT 59.075 47.619 0.00 0.00 0.00 4.18
2425 2560 1.342555 CAACGAGAACAATACGCCGA 58.657 50.000 0.00 0.00 0.00 5.54
2426 2561 0.368907 CCAACGAGAACAATACGCCG 59.631 55.000 0.00 0.00 0.00 6.46
2427 2562 0.096454 GCCAACGAGAACAATACGCC 59.904 55.000 0.00 0.00 0.00 5.68
2428 2563 0.793861 TGCCAACGAGAACAATACGC 59.206 50.000 0.00 0.00 0.00 4.42
2429 2564 3.740044 ATTGCCAACGAGAACAATACG 57.260 42.857 0.00 0.00 31.20 3.06
2430 2565 6.417191 TCTAATTGCCAACGAGAACAATAC 57.583 37.500 0.00 0.00 32.63 1.89
2431 2566 6.821160 TCATCTAATTGCCAACGAGAACAATA 59.179 34.615 0.00 0.00 32.63 1.90
2432 2567 5.647658 TCATCTAATTGCCAACGAGAACAAT 59.352 36.000 0.00 0.00 34.30 2.71
2433 2568 5.000591 TCATCTAATTGCCAACGAGAACAA 58.999 37.500 0.00 0.00 0.00 2.83
2434 2569 4.574892 TCATCTAATTGCCAACGAGAACA 58.425 39.130 0.00 0.00 0.00 3.18
2435 2570 5.557136 CGATCATCTAATTGCCAACGAGAAC 60.557 44.000 0.00 0.00 0.00 3.01
2436 2571 4.507756 CGATCATCTAATTGCCAACGAGAA 59.492 41.667 0.00 0.00 0.00 2.87
2437 2572 4.051237 CGATCATCTAATTGCCAACGAGA 58.949 43.478 0.00 0.00 0.00 4.04
2438 2573 3.363378 GCGATCATCTAATTGCCAACGAG 60.363 47.826 0.00 0.00 30.95 4.18
2439 2574 2.543848 GCGATCATCTAATTGCCAACGA 59.456 45.455 0.00 0.00 30.95 3.85
2440 2575 2.545526 AGCGATCATCTAATTGCCAACG 59.454 45.455 0.00 0.00 36.82 4.10
2441 2576 4.752101 ACTAGCGATCATCTAATTGCCAAC 59.248 41.667 0.00 0.00 36.82 3.77
2442 2577 4.960938 ACTAGCGATCATCTAATTGCCAA 58.039 39.130 0.00 0.00 36.82 4.52
2443 2578 4.607293 ACTAGCGATCATCTAATTGCCA 57.393 40.909 0.00 0.00 36.82 4.92
2444 2579 4.390297 GGAACTAGCGATCATCTAATTGCC 59.610 45.833 0.00 0.00 36.82 4.52
2445 2580 5.119898 CAGGAACTAGCGATCATCTAATTGC 59.880 44.000 0.00 0.00 36.02 3.56
2446 2581 6.219473 ACAGGAACTAGCGATCATCTAATTG 58.781 40.000 0.00 0.00 36.02 2.32
2447 2582 6.412362 ACAGGAACTAGCGATCATCTAATT 57.588 37.500 0.00 0.00 36.02 1.40
2448 2583 6.412362 AACAGGAACTAGCGATCATCTAAT 57.588 37.500 0.00 0.00 36.02 1.73
2449 2584 5.854010 AACAGGAACTAGCGATCATCTAA 57.146 39.130 0.00 0.00 36.02 2.10
2450 2585 5.854010 AAACAGGAACTAGCGATCATCTA 57.146 39.130 0.00 0.00 36.02 1.98
2451 2586 4.744795 AAACAGGAACTAGCGATCATCT 57.255 40.909 0.00 0.00 36.02 2.90
2452 2587 6.701841 TCAATAAACAGGAACTAGCGATCATC 59.298 38.462 0.00 0.00 36.02 2.92
2453 2588 6.582636 TCAATAAACAGGAACTAGCGATCAT 58.417 36.000 0.00 0.00 36.02 2.45
2454 2589 5.972935 TCAATAAACAGGAACTAGCGATCA 58.027 37.500 0.00 0.00 36.02 2.92
2455 2590 5.050702 GCTCAATAAACAGGAACTAGCGATC 60.051 44.000 0.00 0.00 36.02 3.69
2456 2591 4.811557 GCTCAATAAACAGGAACTAGCGAT 59.188 41.667 0.00 0.00 36.02 4.58
2457 2592 4.181578 GCTCAATAAACAGGAACTAGCGA 58.818 43.478 0.00 0.00 36.02 4.93
2458 2593 3.932710 TGCTCAATAAACAGGAACTAGCG 59.067 43.478 0.00 0.00 36.02 4.26
2459 2594 4.938226 ACTGCTCAATAAACAGGAACTAGC 59.062 41.667 0.00 0.00 36.02 3.42
2460 2595 5.163814 GCACTGCTCAATAAACAGGAACTAG 60.164 44.000 0.00 0.00 36.02 2.57
2461 2596 4.695455 GCACTGCTCAATAAACAGGAACTA 59.305 41.667 0.00 0.00 36.02 2.24
2462 2597 3.503748 GCACTGCTCAATAAACAGGAACT 59.496 43.478 0.00 0.00 43.88 3.01
2463 2598 3.503748 AGCACTGCTCAATAAACAGGAAC 59.496 43.478 0.00 0.00 30.62 3.62
2464 2599 3.754965 AGCACTGCTCAATAAACAGGAA 58.245 40.909 0.00 0.00 30.62 3.36
2465 2600 3.423539 AGCACTGCTCAATAAACAGGA 57.576 42.857 0.00 0.00 30.62 3.86
2466 2601 4.510038 AAAGCACTGCTCAATAAACAGG 57.490 40.909 3.40 0.00 38.25 4.00
2467 2602 5.565259 CGTAAAAGCACTGCTCAATAAACAG 59.435 40.000 3.40 0.00 38.25 3.16
2468 2603 5.008217 ACGTAAAAGCACTGCTCAATAAACA 59.992 36.000 3.40 0.00 38.25 2.83
2469 2604 5.339611 CACGTAAAAGCACTGCTCAATAAAC 59.660 40.000 3.40 0.00 38.25 2.01
2470 2605 5.448438 CACGTAAAAGCACTGCTCAATAAA 58.552 37.500 3.40 0.00 38.25 1.40
2471 2606 4.612712 GCACGTAAAAGCACTGCTCAATAA 60.613 41.667 3.40 0.00 38.25 1.40
2472 2607 3.120338 GCACGTAAAAGCACTGCTCAATA 60.120 43.478 3.40 0.00 38.25 1.90
2473 2608 2.350772 GCACGTAAAAGCACTGCTCAAT 60.351 45.455 3.40 0.00 38.25 2.57
2474 2609 1.002900 GCACGTAAAAGCACTGCTCAA 60.003 47.619 3.40 0.00 38.25 3.02
2475 2610 0.586319 GCACGTAAAAGCACTGCTCA 59.414 50.000 3.40 0.00 38.25 4.26
2476 2611 0.110192 GGCACGTAAAAGCACTGCTC 60.110 55.000 3.40 0.00 38.25 4.26
2477 2612 1.949257 GGCACGTAAAAGCACTGCT 59.051 52.632 0.00 0.00 42.56 4.24
2478 2613 4.533566 GGCACGTAAAAGCACTGC 57.466 55.556 0.00 0.00 0.00 4.40
2498 2633 3.432051 GAGAGGCCGGACGACCATG 62.432 68.421 5.05 0.00 35.59 3.66
2499 2634 3.148279 GAGAGGCCGGACGACCAT 61.148 66.667 5.05 0.00 35.59 3.55
2502 2637 3.519930 GAGGAGAGGCCGGACGAC 61.520 72.222 5.05 1.47 43.43 4.34
2506 2641 4.816984 GACCGAGGAGAGGCCGGA 62.817 72.222 5.05 0.00 45.58 5.14
2510 2645 4.200283 CAGCGACCGAGGAGAGGC 62.200 72.222 0.00 0.00 0.00 4.70
2511 2646 3.522731 CCAGCGACCGAGGAGAGG 61.523 72.222 0.00 0.00 0.00 3.69
2512 2647 1.999071 CTTCCAGCGACCGAGGAGAG 61.999 65.000 0.00 0.00 32.11 3.20
2513 2648 2.035155 TTCCAGCGACCGAGGAGA 59.965 61.111 0.00 0.00 32.11 3.71
2514 2649 2.492090 CTTCCAGCGACCGAGGAG 59.508 66.667 0.00 0.00 32.11 3.69
2515 2650 3.760035 GCTTCCAGCGACCGAGGA 61.760 66.667 0.00 0.00 0.00 3.71
2516 2651 2.859273 ATTGCTTCCAGCGACCGAGG 62.859 60.000 0.00 0.00 46.26 4.63
2517 2652 1.424493 GATTGCTTCCAGCGACCGAG 61.424 60.000 0.00 0.00 46.26 4.63
2518 2653 1.447838 GATTGCTTCCAGCGACCGA 60.448 57.895 0.00 0.00 46.26 4.69
2519 2654 2.802667 CGATTGCTTCCAGCGACCG 61.803 63.158 0.00 0.00 46.26 4.79
2520 2655 3.093278 CGATTGCTTCCAGCGACC 58.907 61.111 0.00 0.00 46.26 4.79
2521 2656 2.401195 GCGATTGCTTCCAGCGAC 59.599 61.111 0.00 0.00 46.26 5.19
2522 2657 2.819595 GGCGATTGCTTCCAGCGA 60.820 61.111 4.59 0.00 46.26 4.93
2523 2658 3.126879 TGGCGATTGCTTCCAGCG 61.127 61.111 4.59 0.00 46.26 5.18
2524 2659 2.486966 GTGGCGATTGCTTCCAGC 59.513 61.111 4.59 0.00 42.82 4.85
2525 2660 1.651240 CTGGTGGCGATTGCTTCCAG 61.651 60.000 23.79 23.79 46.35 3.86
2526 2661 1.675310 CTGGTGGCGATTGCTTCCA 60.675 57.895 16.55 16.55 42.25 3.53
2527 2662 2.409870 CCTGGTGGCGATTGCTTCC 61.410 63.158 4.59 8.27 42.25 3.46
2528 2663 1.648467 GACCTGGTGGCGATTGCTTC 61.648 60.000 2.82 0.00 42.25 3.86
2529 2664 1.675641 GACCTGGTGGCGATTGCTT 60.676 57.895 2.82 0.00 42.25 3.91
2530 2665 2.045926 GACCTGGTGGCGATTGCT 60.046 61.111 2.82 0.00 42.25 3.91
2531 2666 1.926511 CTTGACCTGGTGGCGATTGC 61.927 60.000 2.82 0.00 41.71 3.56
2532 2667 0.606401 ACTTGACCTGGTGGCGATTG 60.606 55.000 2.82 0.00 36.63 2.67
2533 2668 0.321653 GACTTGACCTGGTGGCGATT 60.322 55.000 2.82 0.00 36.63 3.34
2534 2669 1.296715 GACTTGACCTGGTGGCGAT 59.703 57.895 2.82 0.00 36.63 4.58
2535 2670 2.099652 CTGACTTGACCTGGTGGCGA 62.100 60.000 2.82 0.00 36.63 5.54
2536 2671 1.669115 CTGACTTGACCTGGTGGCG 60.669 63.158 2.82 0.00 36.63 5.69
2537 2672 1.968540 GCTGACTTGACCTGGTGGC 60.969 63.158 2.82 0.00 36.63 5.01
2538 2673 0.109342 AAGCTGACTTGACCTGGTGG 59.891 55.000 2.82 0.00 33.84 4.61
2539 2674 1.876156 GAAAGCTGACTTGACCTGGTG 59.124 52.381 2.82 0.00 35.85 4.17
2540 2675 1.490490 TGAAAGCTGACTTGACCTGGT 59.510 47.619 0.00 0.00 35.85 4.00
2541 2676 2.260844 TGAAAGCTGACTTGACCTGG 57.739 50.000 0.00 0.00 35.85 4.45
2542 2677 3.817084 TGAATGAAAGCTGACTTGACCTG 59.183 43.478 0.00 0.00 35.85 4.00
2543 2678 3.817647 GTGAATGAAAGCTGACTTGACCT 59.182 43.478 0.00 0.00 35.85 3.85
2544 2679 3.057946 GGTGAATGAAAGCTGACTTGACC 60.058 47.826 0.00 0.00 35.85 4.02
2545 2680 3.817647 AGGTGAATGAAAGCTGACTTGAC 59.182 43.478 0.00 0.00 35.85 3.18
2546 2681 3.817084 CAGGTGAATGAAAGCTGACTTGA 59.183 43.478 0.00 0.00 44.14 3.02
2547 2682 3.611057 GCAGGTGAATGAAAGCTGACTTG 60.611 47.826 6.80 0.00 44.14 3.16
2548 2683 2.555757 GCAGGTGAATGAAAGCTGACTT 59.444 45.455 6.80 0.00 44.14 3.01
2549 2684 2.157738 GCAGGTGAATGAAAGCTGACT 58.842 47.619 6.80 0.00 44.14 3.41
2550 2685 1.200948 GGCAGGTGAATGAAAGCTGAC 59.799 52.381 6.80 0.00 44.14 3.51
2551 2686 1.074405 AGGCAGGTGAATGAAAGCTGA 59.926 47.619 6.80 0.00 44.14 4.26
2552 2687 1.201647 CAGGCAGGTGAATGAAAGCTG 59.798 52.381 0.00 0.00 44.20 4.24
2553 2688 1.542492 CAGGCAGGTGAATGAAAGCT 58.458 50.000 0.00 0.00 0.00 3.74
2554 2689 0.108945 GCAGGCAGGTGAATGAAAGC 60.109 55.000 0.00 0.00 0.00 3.51
2555 2690 0.529378 GGCAGGCAGGTGAATGAAAG 59.471 55.000 0.00 0.00 0.00 2.62
2556 2691 0.178967 TGGCAGGCAGGTGAATGAAA 60.179 50.000 0.00 0.00 0.00 2.69
2557 2692 0.178967 TTGGCAGGCAGGTGAATGAA 60.179 50.000 0.00 0.00 0.00 2.57
2558 2693 0.609957 CTTGGCAGGCAGGTGAATGA 60.610 55.000 0.00 0.00 0.00 2.57
2559 2694 0.896940 ACTTGGCAGGCAGGTGAATG 60.897 55.000 11.31 0.00 0.00 2.67
2560 2695 0.896940 CACTTGGCAGGCAGGTGAAT 60.897 55.000 29.31 0.00 0.00 2.57
2561 2696 1.529010 CACTTGGCAGGCAGGTGAA 60.529 57.895 29.31 0.00 0.00 3.18
2562 2697 2.113774 CACTTGGCAGGCAGGTGA 59.886 61.111 29.31 0.00 0.00 4.02
2563 2698 3.677648 GCACTTGGCAGGCAGGTG 61.678 66.667 28.94 28.94 43.97 4.00
2572 2707 2.159379 GGCATAAACACTAGCACTTGGC 60.159 50.000 0.00 0.00 45.30 4.52
2573 2708 2.423538 GGGCATAAACACTAGCACTTGG 59.576 50.000 0.00 0.00 0.00 3.61
2574 2709 3.081061 TGGGCATAAACACTAGCACTTG 58.919 45.455 0.00 0.00 0.00 3.16
2575 2710 3.433306 TGGGCATAAACACTAGCACTT 57.567 42.857 0.00 0.00 0.00 3.16
2576 2711 3.652057 ATGGGCATAAACACTAGCACT 57.348 42.857 0.00 0.00 0.00 4.40
2577 2712 4.275936 CCTTATGGGCATAAACACTAGCAC 59.724 45.833 0.00 0.00 33.34 4.40
2578 2713 4.080015 ACCTTATGGGCATAAACACTAGCA 60.080 41.667 0.00 0.00 39.10 3.49
2579 2714 4.461198 ACCTTATGGGCATAAACACTAGC 58.539 43.478 0.00 0.00 39.10 3.42
2580 2715 6.119536 TGAACCTTATGGGCATAAACACTAG 58.880 40.000 0.00 0.00 39.10 2.57
2581 2716 6.068461 TGAACCTTATGGGCATAAACACTA 57.932 37.500 0.00 0.00 39.10 2.74
2582 2717 4.929479 TGAACCTTATGGGCATAAACACT 58.071 39.130 0.00 0.00 39.10 3.55
2583 2718 5.852282 ATGAACCTTATGGGCATAAACAC 57.148 39.130 0.00 0.00 39.10 3.32
2584 2719 5.362430 GGAATGAACCTTATGGGCATAAACA 59.638 40.000 0.00 0.00 39.10 2.83
2585 2720 5.362430 TGGAATGAACCTTATGGGCATAAAC 59.638 40.000 0.00 0.00 39.10 2.01
2586 2721 5.362430 GTGGAATGAACCTTATGGGCATAAA 59.638 40.000 0.00 0.00 39.10 1.40
2587 2722 4.892934 GTGGAATGAACCTTATGGGCATAA 59.107 41.667 0.00 0.00 39.10 1.90
2588 2723 4.167892 AGTGGAATGAACCTTATGGGCATA 59.832 41.667 0.00 0.00 39.10 3.14
2589 2724 3.052642 AGTGGAATGAACCTTATGGGCAT 60.053 43.478 0.00 0.17 39.10 4.40
2590 2725 2.311542 AGTGGAATGAACCTTATGGGCA 59.688 45.455 0.00 0.00 39.10 5.36
2591 2726 2.689983 CAGTGGAATGAACCTTATGGGC 59.310 50.000 0.00 0.00 39.10 5.36
2592 2727 2.689983 GCAGTGGAATGAACCTTATGGG 59.310 50.000 0.00 0.00 41.89 4.00
2593 2728 2.355756 CGCAGTGGAATGAACCTTATGG 59.644 50.000 0.00 0.00 39.83 2.74
2594 2729 3.063997 GTCGCAGTGGAATGAACCTTATG 59.936 47.826 0.00 0.00 0.00 1.90
2595 2730 3.270877 GTCGCAGTGGAATGAACCTTAT 58.729 45.455 0.00 0.00 0.00 1.73
2596 2731 2.614481 GGTCGCAGTGGAATGAACCTTA 60.614 50.000 0.00 0.00 0.00 2.69
2597 2732 1.523758 GTCGCAGTGGAATGAACCTT 58.476 50.000 0.00 0.00 0.00 3.50
2598 2733 0.321653 GGTCGCAGTGGAATGAACCT 60.322 55.000 0.00 0.00 0.00 3.50
2599 2734 0.321653 AGGTCGCAGTGGAATGAACC 60.322 55.000 0.00 0.00 0.00 3.62
2600 2735 2.380084 TAGGTCGCAGTGGAATGAAC 57.620 50.000 0.00 0.00 0.00 3.18
2601 2736 2.766263 AGATAGGTCGCAGTGGAATGAA 59.234 45.455 0.00 0.00 0.00 2.57
2602 2737 2.388735 AGATAGGTCGCAGTGGAATGA 58.611 47.619 0.00 0.00 0.00 2.57
2603 2738 2.898729 AGATAGGTCGCAGTGGAATG 57.101 50.000 0.00 0.00 0.00 2.67
2604 2739 2.297597 GCTAGATAGGTCGCAGTGGAAT 59.702 50.000 0.00 0.00 0.00 3.01
2605 2740 1.681793 GCTAGATAGGTCGCAGTGGAA 59.318 52.381 0.00 0.00 0.00 3.53
2606 2741 1.133761 AGCTAGATAGGTCGCAGTGGA 60.134 52.381 0.00 0.00 0.00 4.02
2607 2742 1.268352 GAGCTAGATAGGTCGCAGTGG 59.732 57.143 3.51 0.00 40.47 4.00
2608 2743 2.697431 GAGCTAGATAGGTCGCAGTG 57.303 55.000 3.51 0.00 40.47 3.66
2614 2749 7.917505 GTCTATAGTACTCGAGCTAGATAGGTC 59.082 44.444 13.61 8.66 44.91 3.85
2615 2750 7.396907 TGTCTATAGTACTCGAGCTAGATAGGT 59.603 40.741 13.61 0.00 36.62 3.08
2616 2751 7.774134 TGTCTATAGTACTCGAGCTAGATAGG 58.226 42.308 13.61 0.00 0.00 2.57
2617 2752 8.464404 ACTGTCTATAGTACTCGAGCTAGATAG 58.536 40.741 13.61 17.87 33.35 2.08
2618 2753 8.245491 CACTGTCTATAGTACTCGAGCTAGATA 58.755 40.741 13.61 8.62 0.00 1.98
2619 2754 7.039574 TCACTGTCTATAGTACTCGAGCTAGAT 60.040 40.741 13.61 4.05 0.00 1.98
2620 2755 6.264970 TCACTGTCTATAGTACTCGAGCTAGA 59.735 42.308 13.61 8.51 0.00 2.43
2621 2756 6.364165 GTCACTGTCTATAGTACTCGAGCTAG 59.636 46.154 13.61 6.32 0.00 3.42
2622 2757 6.215121 GTCACTGTCTATAGTACTCGAGCTA 58.785 44.000 13.61 7.31 0.00 3.32
2623 2758 5.051816 GTCACTGTCTATAGTACTCGAGCT 58.948 45.833 13.61 4.97 0.00 4.09
2624 2759 4.211794 GGTCACTGTCTATAGTACTCGAGC 59.788 50.000 13.61 0.00 0.00 5.03
2625 2760 5.358090 TGGTCACTGTCTATAGTACTCGAG 58.642 45.833 11.84 11.84 0.00 4.04
2626 2761 5.349061 TGGTCACTGTCTATAGTACTCGA 57.651 43.478 0.00 0.00 0.00 4.04
2627 2762 4.024725 GCTGGTCACTGTCTATAGTACTCG 60.025 50.000 0.00 0.00 0.00 4.18
2628 2763 4.276431 GGCTGGTCACTGTCTATAGTACTC 59.724 50.000 0.00 0.00 0.00 2.59
2629 2764 4.208746 GGCTGGTCACTGTCTATAGTACT 58.791 47.826 0.00 0.00 0.00 2.73
2630 2765 3.952323 TGGCTGGTCACTGTCTATAGTAC 59.048 47.826 0.00 0.00 0.00 2.73
2631 2766 4.245251 TGGCTGGTCACTGTCTATAGTA 57.755 45.455 0.00 0.00 0.00 1.82
2632 2767 3.101643 TGGCTGGTCACTGTCTATAGT 57.898 47.619 0.00 0.00 0.00 2.12
2633 2768 4.184629 GTTTGGCTGGTCACTGTCTATAG 58.815 47.826 0.00 0.00 0.00 1.31
2634 2769 3.580895 TGTTTGGCTGGTCACTGTCTATA 59.419 43.478 0.00 0.00 0.00 1.31
2635 2770 2.371841 TGTTTGGCTGGTCACTGTCTAT 59.628 45.455 0.00 0.00 0.00 1.98
2636 2771 1.765904 TGTTTGGCTGGTCACTGTCTA 59.234 47.619 0.00 0.00 0.00 2.59
2637 2772 0.546122 TGTTTGGCTGGTCACTGTCT 59.454 50.000 0.00 0.00 0.00 3.41
2638 2773 0.663153 GTGTTTGGCTGGTCACTGTC 59.337 55.000 0.00 0.00 0.00 3.51
2639 2774 0.255890 AGTGTTTGGCTGGTCACTGT 59.744 50.000 0.00 0.00 39.27 3.55
2640 2775 0.664761 CAGTGTTTGGCTGGTCACTG 59.335 55.000 14.20 14.20 46.97 3.66
2641 2776 0.466189 CCAGTGTTTGGCTGGTCACT 60.466 55.000 3.37 0.00 46.22 3.41
2642 2777 2.032981 CCAGTGTTTGGCTGGTCAC 58.967 57.895 3.37 0.00 46.22 3.67
2643 2778 4.577152 CCAGTGTTTGGCTGGTCA 57.423 55.556 3.37 0.00 46.22 4.02
2653 2788 5.413309 TTTTGATTGTGAAACCCAGTGTT 57.587 34.783 0.00 0.00 39.43 3.32
2654 2789 5.612725 ATTTTGATTGTGAAACCCAGTGT 57.387 34.783 0.00 0.00 34.36 3.55
2655 2790 7.118101 CCATAATTTTGATTGTGAAACCCAGTG 59.882 37.037 0.00 0.00 34.36 3.66
2656 2791 7.016072 TCCATAATTTTGATTGTGAAACCCAGT 59.984 33.333 0.00 0.00 34.36 4.00
2657 2792 7.385267 TCCATAATTTTGATTGTGAAACCCAG 58.615 34.615 0.00 0.00 34.36 4.45
2658 2793 7.308450 TCCATAATTTTGATTGTGAAACCCA 57.692 32.000 0.00 0.00 34.36 4.51
2659 2794 8.791327 ATTCCATAATTTTGATTGTGAAACCC 57.209 30.769 0.00 0.00 34.36 4.11
2676 2811 9.096823 ACCCATATAGTCTCGTTTATTCCATAA 57.903 33.333 0.00 0.00 0.00 1.90
2677 2812 8.660295 ACCCATATAGTCTCGTTTATTCCATA 57.340 34.615 0.00 0.00 0.00 2.74
2678 2813 7.234782 TGACCCATATAGTCTCGTTTATTCCAT 59.765 37.037 6.62 0.00 35.21 3.41
2679 2814 6.551975 TGACCCATATAGTCTCGTTTATTCCA 59.448 38.462 6.62 0.00 35.21 3.53
2680 2815 6.989659 TGACCCATATAGTCTCGTTTATTCC 58.010 40.000 6.62 0.00 35.21 3.01
2681 2816 8.882415 TTTGACCCATATAGTCTCGTTTATTC 57.118 34.615 6.62 0.00 35.21 1.75
2682 2817 9.847224 ATTTTGACCCATATAGTCTCGTTTATT 57.153 29.630 6.62 0.00 35.21 1.40
2684 2819 9.754382 GTATTTTGACCCATATAGTCTCGTTTA 57.246 33.333 6.62 0.00 35.21 2.01
2685 2820 8.483758 AGTATTTTGACCCATATAGTCTCGTTT 58.516 33.333 6.62 0.00 35.21 3.60
2686 2821 8.019656 AGTATTTTGACCCATATAGTCTCGTT 57.980 34.615 6.62 0.00 35.21 3.85
2687 2822 7.287005 TGAGTATTTTGACCCATATAGTCTCGT 59.713 37.037 6.62 0.00 35.21 4.18
2688 2823 7.658261 TGAGTATTTTGACCCATATAGTCTCG 58.342 38.462 6.62 0.00 35.21 4.04
2720 2855 9.153721 CAGTGGATGCAAACATTTTATAACATT 57.846 29.630 0.00 0.00 36.35 2.71
2721 2856 8.706492 CAGTGGATGCAAACATTTTATAACAT 57.294 30.769 0.00 0.00 36.35 2.71
2738 2873 4.180817 TGACAATAACGTAGCAGTGGATG 58.819 43.478 0.00 0.00 0.00 3.51
2739 2874 4.081642 ACTGACAATAACGTAGCAGTGGAT 60.082 41.667 0.00 0.00 35.49 3.41
2740 2875 3.257375 ACTGACAATAACGTAGCAGTGGA 59.743 43.478 0.00 0.00 35.49 4.02
2741 2876 3.585862 ACTGACAATAACGTAGCAGTGG 58.414 45.455 0.00 0.00 35.49 4.00
2742 2877 4.561606 GGTACTGACAATAACGTAGCAGTG 59.438 45.833 0.00 3.77 37.21 3.66
2743 2878 4.219070 TGGTACTGACAATAACGTAGCAGT 59.781 41.667 0.00 0.00 39.61 4.40
2744 2879 4.561606 GTGGTACTGACAATAACGTAGCAG 59.438 45.833 4.48 0.00 39.91 4.24
2745 2880 4.487948 GTGGTACTGACAATAACGTAGCA 58.512 43.478 0.00 0.00 37.83 3.49
2746 2881 3.861689 GGTGGTACTGACAATAACGTAGC 59.138 47.826 0.00 0.00 0.00 3.58
2747 2882 5.063180 TGGTGGTACTGACAATAACGTAG 57.937 43.478 0.00 0.00 0.00 3.51
2748 2883 4.082081 CCTGGTGGTACTGACAATAACGTA 60.082 45.833 0.00 0.00 0.00 3.57
2749 2884 3.306502 CCTGGTGGTACTGACAATAACGT 60.307 47.826 0.00 0.00 0.00 3.99
2750 2885 3.259064 CCTGGTGGTACTGACAATAACG 58.741 50.000 0.00 0.00 0.00 3.18
2751 2886 4.000988 CACCTGGTGGTACTGACAATAAC 58.999 47.826 19.23 0.00 46.60 1.89
2752 2887 3.649023 ACACCTGGTGGTACTGACAATAA 59.351 43.478 29.05 0.00 46.60 1.40
2753 2888 3.244582 ACACCTGGTGGTACTGACAATA 58.755 45.455 29.05 0.00 46.60 1.90
2754 2889 2.054799 ACACCTGGTGGTACTGACAAT 58.945 47.619 29.05 2.63 46.60 2.71
2755 2890 1.502690 ACACCTGGTGGTACTGACAA 58.497 50.000 29.05 0.00 46.60 3.18
2756 2891 1.414919 GAACACCTGGTGGTACTGACA 59.585 52.381 29.05 0.00 46.60 3.58
2757 2892 1.414919 TGAACACCTGGTGGTACTGAC 59.585 52.381 29.05 12.24 46.60 3.51
2758 2893 1.796017 TGAACACCTGGTGGTACTGA 58.204 50.000 29.05 6.53 46.60 3.41
2759 2894 2.426522 CATGAACACCTGGTGGTACTG 58.573 52.381 29.05 19.26 46.60 2.74
2760 2895 1.271379 GCATGAACACCTGGTGGTACT 60.271 52.381 29.05 11.94 46.60 2.73
2761 2896 1.165270 GCATGAACACCTGGTGGTAC 58.835 55.000 29.05 19.17 46.60 3.34
2762 2897 0.767998 TGCATGAACACCTGGTGGTA 59.232 50.000 29.05 15.65 46.60 3.25
2764 2899 1.203052 GAATGCATGAACACCTGGTGG 59.797 52.381 29.05 13.03 37.94 4.61
2765 2900 2.165167 AGAATGCATGAACACCTGGTG 58.835 47.619 24.80 24.80 39.75 4.17
2766 2901 2.592102 AGAATGCATGAACACCTGGT 57.408 45.000 0.00 0.00 0.00 4.00
2767 2902 5.587388 AATTAGAATGCATGAACACCTGG 57.413 39.130 0.00 0.00 0.00 4.45
2768 2903 8.407832 TCATAAATTAGAATGCATGAACACCTG 58.592 33.333 0.00 0.00 0.00 4.00
2769 2904 8.523915 TCATAAATTAGAATGCATGAACACCT 57.476 30.769 0.00 0.00 0.00 4.00
2770 2905 9.188588 CATCATAAATTAGAATGCATGAACACC 57.811 33.333 0.00 0.00 0.00 4.16
2771 2906 9.188588 CCATCATAAATTAGAATGCATGAACAC 57.811 33.333 0.00 0.00 0.00 3.32
2772 2907 7.868922 GCCATCATAAATTAGAATGCATGAACA 59.131 33.333 0.00 0.00 0.00 3.18
2773 2908 8.086522 AGCCATCATAAATTAGAATGCATGAAC 58.913 33.333 0.00 0.00 0.00 3.18
2774 2909 8.185506 AGCCATCATAAATTAGAATGCATGAA 57.814 30.769 0.00 0.00 0.00 2.57
2775 2910 7.770366 AGCCATCATAAATTAGAATGCATGA 57.230 32.000 0.00 0.00 0.00 3.07
2776 2911 7.148639 GCAAGCCATCATAAATTAGAATGCATG 60.149 37.037 0.00 0.00 0.00 4.06
2777 2912 6.872020 GCAAGCCATCATAAATTAGAATGCAT 59.128 34.615 0.00 0.00 0.00 3.96
2778 2913 6.041182 AGCAAGCCATCATAAATTAGAATGCA 59.959 34.615 0.00 0.00 0.00 3.96
2779 2914 6.365247 CAGCAAGCCATCATAAATTAGAATGC 59.635 38.462 0.00 0.00 0.00 3.56
2780 2915 7.431249 ACAGCAAGCCATCATAAATTAGAATG 58.569 34.615 0.00 0.00 0.00 2.67
2781 2916 7.592885 ACAGCAAGCCATCATAAATTAGAAT 57.407 32.000 0.00 0.00 0.00 2.40
2782 2917 7.122501 TCAACAGCAAGCCATCATAAATTAGAA 59.877 33.333 0.00 0.00 0.00 2.10
2783 2918 6.602803 TCAACAGCAAGCCATCATAAATTAGA 59.397 34.615 0.00 0.00 0.00 2.10
2784 2919 6.798482 TCAACAGCAAGCCATCATAAATTAG 58.202 36.000 0.00 0.00 0.00 1.73
2785 2920 6.183360 CCTCAACAGCAAGCCATCATAAATTA 60.183 38.462 0.00 0.00 0.00 1.40
2786 2921 5.394883 CCTCAACAGCAAGCCATCATAAATT 60.395 40.000 0.00 0.00 0.00 1.82
2787 2922 4.098960 CCTCAACAGCAAGCCATCATAAAT 59.901 41.667 0.00 0.00 0.00 1.40
2788 2923 3.444742 CCTCAACAGCAAGCCATCATAAA 59.555 43.478 0.00 0.00 0.00 1.40
2789 2924 3.018856 CCTCAACAGCAAGCCATCATAA 58.981 45.455 0.00 0.00 0.00 1.90
2790 2925 2.025981 ACCTCAACAGCAAGCCATCATA 60.026 45.455 0.00 0.00 0.00 2.15
2791 2926 1.272313 ACCTCAACAGCAAGCCATCAT 60.272 47.619 0.00 0.00 0.00 2.45
2792 2927 0.111061 ACCTCAACAGCAAGCCATCA 59.889 50.000 0.00 0.00 0.00 3.07
2793 2928 0.524862 CACCTCAACAGCAAGCCATC 59.475 55.000 0.00 0.00 0.00 3.51
2794 2929 0.178981 ACACCTCAACAGCAAGCCAT 60.179 50.000 0.00 0.00 0.00 4.40
2795 2930 0.395586 AACACCTCAACAGCAAGCCA 60.396 50.000 0.00 0.00 0.00 4.75
2796 2931 0.312102 GAACACCTCAACAGCAAGCC 59.688 55.000 0.00 0.00 0.00 4.35
2797 2932 1.312815 AGAACACCTCAACAGCAAGC 58.687 50.000 0.00 0.00 0.00 4.01
2798 2933 2.684881 ACAAGAACACCTCAACAGCAAG 59.315 45.455 0.00 0.00 0.00 4.01
2799 2934 2.423185 CACAAGAACACCTCAACAGCAA 59.577 45.455 0.00 0.00 0.00 3.91
2800 2935 2.016318 CACAAGAACACCTCAACAGCA 58.984 47.619 0.00 0.00 0.00 4.41
2801 2936 1.268743 GCACAAGAACACCTCAACAGC 60.269 52.381 0.00 0.00 0.00 4.40
2802 2937 2.292267 AGCACAAGAACACCTCAACAG 58.708 47.619 0.00 0.00 0.00 3.16
2803 2938 2.418368 AGCACAAGAACACCTCAACA 57.582 45.000 0.00 0.00 0.00 3.33
2804 2939 2.945668 AGAAGCACAAGAACACCTCAAC 59.054 45.455 0.00 0.00 0.00 3.18
2805 2940 2.945008 CAGAAGCACAAGAACACCTCAA 59.055 45.455 0.00 0.00 0.00 3.02
2806 2941 2.564771 CAGAAGCACAAGAACACCTCA 58.435 47.619 0.00 0.00 0.00 3.86
2807 2942 1.876156 CCAGAAGCACAAGAACACCTC 59.124 52.381 0.00 0.00 0.00 3.85
2808 2943 1.212935 ACCAGAAGCACAAGAACACCT 59.787 47.619 0.00 0.00 0.00 4.00
2809 2944 1.334869 CACCAGAAGCACAAGAACACC 59.665 52.381 0.00 0.00 0.00 4.16
2810 2945 1.334869 CCACCAGAAGCACAAGAACAC 59.665 52.381 0.00 0.00 0.00 3.32
2811 2946 1.679139 CCACCAGAAGCACAAGAACA 58.321 50.000 0.00 0.00 0.00 3.18
2812 2947 0.312102 GCCACCAGAAGCACAAGAAC 59.688 55.000 0.00 0.00 0.00 3.01
2813 2948 0.183492 AGCCACCAGAAGCACAAGAA 59.817 50.000 0.00 0.00 0.00 2.52
2814 2949 0.183492 AAGCCACCAGAAGCACAAGA 59.817 50.000 0.00 0.00 0.00 3.02
2815 2950 1.000938 GAAAGCCACCAGAAGCACAAG 60.001 52.381 0.00 0.00 0.00 3.16
2816 2951 1.032014 GAAAGCCACCAGAAGCACAA 58.968 50.000 0.00 0.00 0.00 3.33
2817 2952 0.183492 AGAAAGCCACCAGAAGCACA 59.817 50.000 0.00 0.00 0.00 4.57
2818 2953 0.595095 CAGAAAGCCACCAGAAGCAC 59.405 55.000 0.00 0.00 0.00 4.40
2819 2954 1.174712 GCAGAAAGCCACCAGAAGCA 61.175 55.000 0.00 0.00 37.23 3.91
2820 2955 1.583477 GCAGAAAGCCACCAGAAGC 59.417 57.895 0.00 0.00 37.23 3.86
2830 2965 3.001736 CCGATAGCAAAGTAGCAGAAAGC 59.998 47.826 0.00 0.00 46.19 3.51
2831 2966 4.184629 ACCGATAGCAAAGTAGCAGAAAG 58.815 43.478 0.00 0.00 36.85 2.62
2832 2967 4.202245 ACCGATAGCAAAGTAGCAGAAA 57.798 40.909 0.00 0.00 36.85 2.52
2833 2968 3.887621 ACCGATAGCAAAGTAGCAGAA 57.112 42.857 0.00 0.00 36.85 3.02
2834 2969 3.067742 GGTACCGATAGCAAAGTAGCAGA 59.932 47.826 0.00 0.00 36.85 4.26
2835 2970 3.181479 TGGTACCGATAGCAAAGTAGCAG 60.181 47.826 7.57 0.00 38.04 4.24
2836 2971 2.761767 TGGTACCGATAGCAAAGTAGCA 59.238 45.455 7.57 0.00 39.97 3.49
2837 2972 3.121544 GTGGTACCGATAGCAAAGTAGC 58.878 50.000 7.57 0.00 40.40 3.58
2838 2973 4.650754 AGTGGTACCGATAGCAAAGTAG 57.349 45.455 7.57 0.00 40.40 2.57
2839 2974 5.410355 AAAGTGGTACCGATAGCAAAGTA 57.590 39.130 7.57 0.00 40.40 2.24
2840 2975 3.975168 AAGTGGTACCGATAGCAAAGT 57.025 42.857 7.57 0.00 40.40 2.66
2841 2976 4.454504 ACAAAAGTGGTACCGATAGCAAAG 59.545 41.667 7.57 0.00 40.40 2.77
2842 2977 4.391155 ACAAAAGTGGTACCGATAGCAAA 58.609 39.130 7.57 0.00 40.40 3.68
2843 2978 4.010667 ACAAAAGTGGTACCGATAGCAA 57.989 40.909 7.57 0.00 40.40 3.91
2844 2979 3.688694 ACAAAAGTGGTACCGATAGCA 57.311 42.857 7.57 0.00 36.45 3.49
2845 2980 6.673154 ATAAACAAAAGTGGTACCGATAGC 57.327 37.500 7.57 0.00 0.00 2.97
2848 2983 9.457436 AGAAATATAAACAAAAGTGGTACCGAT 57.543 29.630 7.57 0.00 0.00 4.18
2849 2984 8.851541 AGAAATATAAACAAAAGTGGTACCGA 57.148 30.769 7.57 0.00 0.00 4.69
2850 2985 8.179615 GGAGAAATATAAACAAAAGTGGTACCG 58.820 37.037 7.57 0.00 0.00 4.02
2851 2986 9.016438 TGGAGAAATATAAACAAAAGTGGTACC 57.984 33.333 4.43 4.43 0.00 3.34
2854 2989 9.981114 CTTTGGAGAAATATAAACAAAAGTGGT 57.019 29.630 0.00 0.00 0.00 4.16
2855 2990 8.925700 GCTTTGGAGAAATATAAACAAAAGTGG 58.074 33.333 0.00 0.00 0.00 4.00
2856 2991 9.696917 AGCTTTGGAGAAATATAAACAAAAGTG 57.303 29.630 0.00 0.00 0.00 3.16
2857 2992 9.914131 GAGCTTTGGAGAAATATAAACAAAAGT 57.086 29.630 0.00 0.00 0.00 2.66
2858 2993 9.912634 TGAGCTTTGGAGAAATATAAACAAAAG 57.087 29.630 0.00 0.00 0.00 2.27
2860 2995 9.859427 CATGAGCTTTGGAGAAATATAAACAAA 57.141 29.630 0.00 0.00 0.00 2.83
2861 2996 9.241919 TCATGAGCTTTGGAGAAATATAAACAA 57.758 29.630 0.00 0.00 0.00 2.83
2862 2997 8.806429 TCATGAGCTTTGGAGAAATATAAACA 57.194 30.769 0.00 0.00 0.00 2.83


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.