Multiple sequence alignment - TraesCS2B01G017200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G017200 chr2B 100.000 3440 0 0 1 3440 8009249 8012688 0.000000e+00 6353.0
1 TraesCS2B01G017200 chr2B 99.081 2830 25 1 1 2830 8173862 8176690 0.000000e+00 5081.0
2 TraesCS2B01G017200 chr2B 97.551 2001 49 0 140 2140 7963063 7965063 0.000000e+00 3424.0
3 TraesCS2B01G017200 chr2B 97.251 2001 55 0 140 2140 8131828 8133828 0.000000e+00 3391.0
4 TraesCS2B01G017200 chr2B 89.845 1999 151 32 757 2738 30981881 30983844 0.000000e+00 2519.0
5 TraesCS2B01G017200 chr2B 95.783 166 6 1 3269 3433 756550967 756551132 2.040000e-67 267.0
6 TraesCS2B01G017200 chr2B 78.832 274 33 11 187 451 8597802 8597545 9.880000e-36 161.0
7 TraesCS2B01G017200 chr2B 97.727 44 0 1 2183 2226 8133874 8133832 1.320000e-09 75.0
8 TraesCS2B01G017200 chr2A 90.054 1860 116 23 917 2737 2274750 2272921 0.000000e+00 2346.0
9 TraesCS2B01G017200 chr2A 91.270 126 9 2 18 141 689429269 689429144 1.640000e-38 171.0
10 TraesCS2B01G017200 chr5B 97.006 167 4 1 3268 3433 281370154 281369988 2.610000e-71 279.0
11 TraesCS2B01G017200 chr5B 89.831 59 6 0 454 512 394973653 394973595 3.680000e-10 76.8
12 TraesCS2B01G017200 chr2D 96.386 166 5 1 3269 3433 638306349 638306514 4.370000e-69 272.0
13 TraesCS2B01G017200 chr2D 95.833 168 5 2 3268 3433 403480411 403480578 1.570000e-68 270.0
14 TraesCS2B01G017200 chr2D 95.783 166 6 1 3269 3433 48176283 48176448 2.040000e-67 267.0
15 TraesCS2B01G017200 chr2D 91.525 59 5 0 454 512 305910673 305910731 7.910000e-12 82.4
16 TraesCS2B01G017200 chr4A 95.808 167 6 1 3268 3433 733354671 733354505 5.660000e-68 268.0
17 TraesCS2B01G017200 chr4A 88.889 54 6 0 2756 2809 707665165 707665218 2.220000e-07 67.6
18 TraesCS2B01G017200 chr7B 95.783 166 6 1 3269 3433 605365077 605365242 2.040000e-67 267.0
19 TraesCS2B01G017200 chr7B 90.000 120 11 1 19 138 671769534 671769416 1.650000e-33 154.0
20 TraesCS2B01G017200 chr7B 89.256 121 12 1 22 141 525193395 525193515 2.140000e-32 150.0
21 TraesCS2B01G017200 chr7B 80.672 119 10 8 2161 2277 374530281 374530388 2.850000e-11 80.5
22 TraesCS2B01G017200 chr7B 88.679 53 5 1 2757 2809 105829427 105829376 2.870000e-06 63.9
23 TraesCS2B01G017200 chr4B 95.783 166 5 2 3269 3433 629960942 629960778 2.040000e-67 267.0
24 TraesCS2B01G017200 chr4B 86.567 67 8 1 446 512 607282497 607282562 4.760000e-09 73.1
25 TraesCS2B01G017200 chr1D 95.783 166 6 1 3269 3433 363855974 363855809 2.040000e-67 267.0
26 TraesCS2B01G017200 chr1B 90.244 123 10 1 21 141 662378316 662378194 3.550000e-35 159.0
27 TraesCS2B01G017200 chr7D 86.486 148 12 8 1 141 457758644 457758790 4.600000e-34 156.0
28 TraesCS2B01G017200 chr7D 81.513 119 9 9 2161 2277 379091508 379091615 6.120000e-13 86.1
29 TraesCS2B01G017200 chr7D 90.769 65 4 2 2746 2809 590865555 590865618 6.120000e-13 86.1
30 TraesCS2B01G017200 chr6A 75.660 341 66 11 2097 2433 50408437 50408110 1.650000e-33 154.0
31 TraesCS2B01G017200 chr6A 75.660 341 66 11 2097 2433 50465032 50464705 1.650000e-33 154.0
32 TraesCS2B01G017200 chr6A 75.595 336 65 11 2102 2433 50865022 50864700 2.140000e-32 150.0
33 TraesCS2B01G017200 chr7A 88.710 124 13 1 14 137 120699596 120699474 2.140000e-32 150.0
34 TraesCS2B01G017200 chr7A 86.719 128 16 1 14 141 109706017 109705891 1.290000e-29 141.0
35 TraesCS2B01G017200 chr7A 81.513 119 9 9 2161 2277 427558266 427558373 6.120000e-13 86.1
36 TraesCS2B01G017200 chrUn 75.710 317 65 9 2097 2411 114234842 114235148 7.690000e-32 148.0
37 TraesCS2B01G017200 chr5A 88.095 126 12 2 10 134 20639034 20639157 2.770000e-31 147.0
38 TraesCS2B01G017200 chr5D 78.421 190 20 10 446 625 334935508 334935686 1.690000e-18 104.0
39 TraesCS2B01G017200 chr6B 88.710 62 6 1 455 516 171452692 171452752 1.320000e-09 75.0
40 TraesCS2B01G017200 chr6D 83.529 85 7 6 2581 2665 360816146 360816223 4.760000e-09 73.1
41 TraesCS2B01G017200 chr4D 85.075 67 9 1 446 512 479957024 479957089 2.220000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G017200 chr2B 8009249 8012688 3439 False 6353 6353 100.000 1 3440 1 chr2B.!!$F2 3439
1 TraesCS2B01G017200 chr2B 8173862 8176690 2828 False 5081 5081 99.081 1 2830 1 chr2B.!!$F4 2829
2 TraesCS2B01G017200 chr2B 7963063 7965063 2000 False 3424 3424 97.551 140 2140 1 chr2B.!!$F1 2000
3 TraesCS2B01G017200 chr2B 8131828 8133828 2000 False 3391 3391 97.251 140 2140 1 chr2B.!!$F3 2000
4 TraesCS2B01G017200 chr2B 30981881 30983844 1963 False 2519 2519 89.845 757 2738 1 chr2B.!!$F5 1981
5 TraesCS2B01G017200 chr2A 2272921 2274750 1829 True 2346 2346 90.054 917 2737 1 chr2A.!!$R1 1820

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
629 630 1.014044 GGCTCGTGCATGAAGTTCGA 61.014 55.0 10.41 1.41 41.91 3.71 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2711 2796 2.348218 CGTGTTCTTGTACTCGGCAAAC 60.348 50.0 0.0 0.0 32.95 2.93 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
67 68 4.382291 CCGTAATAATTCGGTCCCATCAA 58.618 43.478 0.00 0.00 41.58 2.57
69 70 5.472137 CCGTAATAATTCGGTCCCATCAAAT 59.528 40.000 0.00 0.00 41.58 2.32
93 94 9.683069 AATTAATGGCTCGCAAAATCTAATTAG 57.317 29.630 6.11 6.11 0.00 1.73
629 630 1.014044 GGCTCGTGCATGAAGTTCGA 61.014 55.000 10.41 1.41 41.91 3.71
1378 1392 2.201921 TACTCTCGTTGCTGACCTCT 57.798 50.000 0.00 0.00 0.00 3.69
1978 1992 1.066215 AGATGAAGTACATGCACGCCA 60.066 47.619 0.00 0.00 39.56 5.69
2711 2796 4.497966 TCATCGTTATCGCGTTCTTTACTG 59.502 41.667 5.77 0.00 36.96 2.74
2768 2854 0.753262 GCCGAGAGCCCTATGAAAGA 59.247 55.000 0.00 0.00 34.35 2.52
2830 2916 0.610232 AGCAGCAAGGAATCCACCAC 60.610 55.000 0.61 0.00 0.00 4.16
2831 2917 1.926511 GCAGCAAGGAATCCACCACG 61.927 60.000 0.61 0.00 0.00 4.94
2832 2918 0.321564 CAGCAAGGAATCCACCACGA 60.322 55.000 0.61 0.00 0.00 4.35
2833 2919 0.036010 AGCAAGGAATCCACCACGAG 60.036 55.000 0.61 0.00 0.00 4.18
2834 2920 1.648467 GCAAGGAATCCACCACGAGC 61.648 60.000 0.61 0.00 0.00 5.03
2835 2921 0.321564 CAAGGAATCCACCACGAGCA 60.322 55.000 0.61 0.00 0.00 4.26
2836 2922 0.321653 AAGGAATCCACCACGAGCAC 60.322 55.000 0.61 0.00 0.00 4.40
2837 2923 1.194781 AGGAATCCACCACGAGCACT 61.195 55.000 0.61 0.00 0.00 4.40
2838 2924 1.021390 GGAATCCACCACGAGCACTG 61.021 60.000 0.00 0.00 0.00 3.66
2839 2925 1.003355 AATCCACCACGAGCACTGG 60.003 57.895 0.00 0.00 34.62 4.00
2840 2926 1.480212 AATCCACCACGAGCACTGGA 61.480 55.000 6.63 0.31 37.22 3.86
2841 2927 1.267574 ATCCACCACGAGCACTGGAT 61.268 55.000 6.63 2.51 38.48 3.41
2842 2928 0.613572 TCCACCACGAGCACTGGATA 60.614 55.000 6.63 0.00 32.55 2.59
2843 2929 0.249120 CCACCACGAGCACTGGATAA 59.751 55.000 6.63 0.00 32.55 1.75
2844 2930 1.134401 CCACCACGAGCACTGGATAAT 60.134 52.381 6.63 0.00 32.55 1.28
2845 2931 2.632377 CACCACGAGCACTGGATAATT 58.368 47.619 6.63 0.00 32.55 1.40
2846 2932 3.009723 CACCACGAGCACTGGATAATTT 58.990 45.455 6.63 0.00 32.55 1.82
2847 2933 3.009723 ACCACGAGCACTGGATAATTTG 58.990 45.455 6.63 0.00 32.55 2.32
2848 2934 3.009723 CCACGAGCACTGGATAATTTGT 58.990 45.455 0.00 0.00 0.00 2.83
2849 2935 3.063997 CCACGAGCACTGGATAATTTGTC 59.936 47.826 0.00 0.00 0.00 3.18
2850 2936 3.684305 CACGAGCACTGGATAATTTGTCA 59.316 43.478 0.00 0.00 0.00 3.58
2851 2937 3.684788 ACGAGCACTGGATAATTTGTCAC 59.315 43.478 0.00 0.00 0.00 3.67
2852 2938 3.935203 CGAGCACTGGATAATTTGTCACT 59.065 43.478 0.00 0.00 0.00 3.41
2853 2939 4.201753 CGAGCACTGGATAATTTGTCACTG 60.202 45.833 0.00 0.00 0.00 3.66
2854 2940 3.441572 AGCACTGGATAATTTGTCACTGC 59.558 43.478 0.00 0.00 0.00 4.40
2855 2941 3.428045 GCACTGGATAATTTGTCACTGCC 60.428 47.826 0.00 0.00 0.00 4.85
2856 2942 3.758023 CACTGGATAATTTGTCACTGCCA 59.242 43.478 0.00 0.00 0.00 4.92
2857 2943 4.400251 CACTGGATAATTTGTCACTGCCAT 59.600 41.667 0.00 0.00 0.00 4.40
2858 2944 4.400251 ACTGGATAATTTGTCACTGCCATG 59.600 41.667 0.00 0.00 0.00 3.66
2859 2945 3.130869 TGGATAATTTGTCACTGCCATGC 59.869 43.478 0.00 0.00 0.00 4.06
2860 2946 3.491447 GGATAATTTGTCACTGCCATGCC 60.491 47.826 0.00 0.00 0.00 4.40
2861 2947 1.340088 AATTTGTCACTGCCATGCCA 58.660 45.000 0.00 0.00 0.00 4.92
2862 2948 1.340088 ATTTGTCACTGCCATGCCAA 58.660 45.000 0.00 0.00 0.00 4.52
2863 2949 0.388659 TTTGTCACTGCCATGCCAAC 59.611 50.000 0.00 0.00 0.00 3.77
2864 2950 1.794151 TTGTCACTGCCATGCCAACG 61.794 55.000 0.00 0.00 0.00 4.10
2865 2951 2.112928 TCACTGCCATGCCAACGT 59.887 55.556 0.00 0.00 0.00 3.99
2866 2952 0.953471 GTCACTGCCATGCCAACGTA 60.953 55.000 0.00 0.00 0.00 3.57
2867 2953 0.953471 TCACTGCCATGCCAACGTAC 60.953 55.000 0.00 0.00 0.00 3.67
2868 2954 0.955428 CACTGCCATGCCAACGTACT 60.955 55.000 0.00 0.00 0.00 2.73
2869 2955 0.955428 ACTGCCATGCCAACGTACTG 60.955 55.000 0.00 0.00 0.00 2.74
2870 2956 0.673333 CTGCCATGCCAACGTACTGA 60.673 55.000 0.00 0.00 0.00 3.41
2871 2957 0.035534 TGCCATGCCAACGTACTGAT 60.036 50.000 0.00 0.00 0.00 2.90
2872 2958 1.094785 GCCATGCCAACGTACTGATT 58.905 50.000 0.00 0.00 0.00 2.57
2873 2959 1.064060 GCCATGCCAACGTACTGATTC 59.936 52.381 0.00 0.00 0.00 2.52
2874 2960 2.355197 CCATGCCAACGTACTGATTCA 58.645 47.619 0.00 0.00 0.00 2.57
2875 2961 2.746904 CCATGCCAACGTACTGATTCAA 59.253 45.455 0.00 0.00 0.00 2.69
2876 2962 3.190327 CCATGCCAACGTACTGATTCAAA 59.810 43.478 0.00 0.00 0.00 2.69
2877 2963 4.320861 CCATGCCAACGTACTGATTCAAAA 60.321 41.667 0.00 0.00 0.00 2.44
2878 2964 4.217754 TGCCAACGTACTGATTCAAAAC 57.782 40.909 0.00 0.00 0.00 2.43
2879 2965 3.880490 TGCCAACGTACTGATTCAAAACT 59.120 39.130 0.00 0.00 0.00 2.66
2880 2966 4.219033 GCCAACGTACTGATTCAAAACTG 58.781 43.478 0.00 0.00 0.00 3.16
2881 2967 4.261031 GCCAACGTACTGATTCAAAACTGT 60.261 41.667 0.00 0.00 0.00 3.55
2882 2968 5.049954 GCCAACGTACTGATTCAAAACTGTA 60.050 40.000 0.00 0.00 0.00 2.74
2883 2969 6.590357 CCAACGTACTGATTCAAAACTGTAG 58.410 40.000 0.00 0.00 0.00 2.74
2884 2970 6.202188 CCAACGTACTGATTCAAAACTGTAGT 59.798 38.462 0.00 0.00 0.00 2.73
2885 2971 7.383029 CCAACGTACTGATTCAAAACTGTAGTA 59.617 37.037 0.00 0.00 0.00 1.82
2886 2972 8.425491 CAACGTACTGATTCAAAACTGTAGTAG 58.575 37.037 0.00 0.00 0.00 2.57
2887 2973 7.655490 ACGTACTGATTCAAAACTGTAGTAGT 58.345 34.615 0.00 0.00 42.89 2.73
2888 2974 8.786898 ACGTACTGATTCAAAACTGTAGTAGTA 58.213 33.333 0.00 0.00 39.18 1.82
2889 2975 9.059485 CGTACTGATTCAAAACTGTAGTAGTAC 57.941 37.037 0.37 0.37 39.18 2.73
2890 2976 9.059485 GTACTGATTCAAAACTGTAGTAGTACG 57.941 37.037 3.32 1.48 39.18 3.67
2891 2977 6.585322 ACTGATTCAAAACTGTAGTAGTACGC 59.415 38.462 3.32 0.00 39.18 4.42
2892 2978 6.448852 TGATTCAAAACTGTAGTAGTACGCA 58.551 36.000 3.32 0.00 39.18 5.24
2893 2979 6.584942 TGATTCAAAACTGTAGTAGTACGCAG 59.415 38.462 19.46 19.46 39.18 5.18
2894 2980 4.801891 TCAAAACTGTAGTAGTACGCAGG 58.198 43.478 22.69 11.35 39.18 4.85
2895 2981 2.935481 AACTGTAGTAGTACGCAGGC 57.065 50.000 22.69 4.94 39.18 4.85
2896 2982 1.830279 ACTGTAGTAGTACGCAGGCA 58.170 50.000 22.69 8.23 38.04 4.75
2897 2983 2.376109 ACTGTAGTAGTACGCAGGCAT 58.624 47.619 22.69 7.72 38.04 4.40
2898 2984 2.099263 ACTGTAGTAGTACGCAGGCATG 59.901 50.000 22.69 0.00 38.04 4.06
2899 2985 1.407618 TGTAGTAGTACGCAGGCATGG 59.592 52.381 0.00 0.00 30.95 3.66
2900 2986 1.037493 TAGTAGTACGCAGGCATGGG 58.963 55.000 14.34 14.34 44.61 4.00
2901 2987 0.686441 AGTAGTACGCAGGCATGGGA 60.686 55.000 22.86 2.97 41.76 4.37
2902 2988 0.249489 GTAGTACGCAGGCATGGGAG 60.249 60.000 22.86 0.00 41.76 4.30
2903 2989 0.686441 TAGTACGCAGGCATGGGAGT 60.686 55.000 22.86 10.72 41.76 3.85
2904 2990 1.815421 GTACGCAGGCATGGGAGTG 60.815 63.158 22.86 0.00 41.76 3.51
2905 2991 2.290287 TACGCAGGCATGGGAGTGT 61.290 57.895 22.86 1.75 41.76 3.55
2906 2992 1.836999 TACGCAGGCATGGGAGTGTT 61.837 55.000 22.86 1.35 41.76 3.32
2907 2993 1.973281 CGCAGGCATGGGAGTGTTT 60.973 57.895 10.19 0.00 41.76 2.83
2908 2994 1.588082 GCAGGCATGGGAGTGTTTG 59.412 57.895 0.00 0.00 0.00 2.93
2909 2995 1.181098 GCAGGCATGGGAGTGTTTGT 61.181 55.000 0.00 0.00 0.00 2.83
2910 2996 0.883833 CAGGCATGGGAGTGTTTGTC 59.116 55.000 0.00 0.00 0.00 3.18
2911 2997 0.773644 AGGCATGGGAGTGTTTGTCT 59.226 50.000 0.00 0.00 0.00 3.41
2912 2998 0.883833 GGCATGGGAGTGTTTGTCTG 59.116 55.000 0.00 0.00 0.00 3.51
2913 2999 1.609208 GCATGGGAGTGTTTGTCTGT 58.391 50.000 0.00 0.00 0.00 3.41
2914 3000 2.552155 GGCATGGGAGTGTTTGTCTGTA 60.552 50.000 0.00 0.00 0.00 2.74
2915 3001 3.146066 GCATGGGAGTGTTTGTCTGTAA 58.854 45.455 0.00 0.00 0.00 2.41
2916 3002 3.568007 GCATGGGAGTGTTTGTCTGTAAA 59.432 43.478 0.00 0.00 0.00 2.01
2917 3003 4.320494 GCATGGGAGTGTTTGTCTGTAAAG 60.320 45.833 0.00 0.00 0.00 1.85
2918 3004 4.497291 TGGGAGTGTTTGTCTGTAAAGT 57.503 40.909 0.00 0.00 0.00 2.66
2919 3005 4.850680 TGGGAGTGTTTGTCTGTAAAGTT 58.149 39.130 0.00 0.00 0.00 2.66
2920 3006 4.638421 TGGGAGTGTTTGTCTGTAAAGTTG 59.362 41.667 0.00 0.00 0.00 3.16
2921 3007 4.036380 GGGAGTGTTTGTCTGTAAAGTTGG 59.964 45.833 0.00 0.00 0.00 3.77
2922 3008 4.879545 GGAGTGTTTGTCTGTAAAGTTGGA 59.120 41.667 0.00 0.00 0.00 3.53
2923 3009 5.531287 GGAGTGTTTGTCTGTAAAGTTGGAT 59.469 40.000 0.00 0.00 0.00 3.41
2924 3010 6.708949 GGAGTGTTTGTCTGTAAAGTTGGATA 59.291 38.462 0.00 0.00 0.00 2.59
2925 3011 7.227910 GGAGTGTTTGTCTGTAAAGTTGGATAA 59.772 37.037 0.00 0.00 0.00 1.75
2926 3012 8.514330 AGTGTTTGTCTGTAAAGTTGGATAAA 57.486 30.769 0.00 0.00 0.00 1.40
2927 3013 9.131791 AGTGTTTGTCTGTAAAGTTGGATAAAT 57.868 29.630 0.00 0.00 0.00 1.40
2940 3026 7.617041 AGTTGGATAAATAAACAGAGACTGC 57.383 36.000 0.00 0.00 34.37 4.40
2941 3027 6.599638 AGTTGGATAAATAAACAGAGACTGCC 59.400 38.462 0.00 0.00 34.37 4.85
2942 3028 6.061022 TGGATAAATAAACAGAGACTGCCA 57.939 37.500 0.00 0.00 34.37 4.92
2943 3029 6.115446 TGGATAAATAAACAGAGACTGCCAG 58.885 40.000 0.00 0.00 34.37 4.85
2944 3030 5.529060 GGATAAATAAACAGAGACTGCCAGG 59.471 44.000 0.00 0.00 34.37 4.45
2945 3031 2.409948 ATAAACAGAGACTGCCAGGC 57.590 50.000 3.66 3.66 34.37 4.85
2946 3032 1.352083 TAAACAGAGACTGCCAGGCT 58.648 50.000 14.15 0.00 35.22 4.58
2947 3033 0.250640 AAACAGAGACTGCCAGGCTG 60.251 55.000 3.80 16.57 30.20 4.85
2948 3034 1.123861 AACAGAGACTGCCAGGCTGA 61.124 55.000 24.37 0.00 30.20 4.26
2949 3035 0.908656 ACAGAGACTGCCAGGCTGAT 60.909 55.000 24.37 12.28 30.20 2.90
2950 3036 0.462225 CAGAGACTGCCAGGCTGATG 60.462 60.000 24.37 0.00 30.20 3.07
2951 3037 1.818785 GAGACTGCCAGGCTGATGC 60.819 63.158 24.37 12.60 30.20 3.91
2961 3047 3.837578 GCTGATGCCATGGGAGTG 58.162 61.111 15.13 6.22 0.00 3.51
2962 3048 1.077212 GCTGATGCCATGGGAGTGT 60.077 57.895 15.13 0.00 0.00 3.55
2963 3049 0.682209 GCTGATGCCATGGGAGTGTT 60.682 55.000 15.13 0.00 0.00 3.32
2964 3050 1.843368 CTGATGCCATGGGAGTGTTT 58.157 50.000 15.13 0.00 0.00 2.83
2965 3051 1.475280 CTGATGCCATGGGAGTGTTTG 59.525 52.381 15.13 0.00 0.00 2.93
2966 3052 1.203038 TGATGCCATGGGAGTGTTTGT 60.203 47.619 15.13 0.00 0.00 2.83
2967 3053 1.474077 GATGCCATGGGAGTGTTTGTC 59.526 52.381 15.13 0.00 0.00 3.18
2968 3054 0.478072 TGCCATGGGAGTGTTTGTCT 59.522 50.000 15.13 0.00 0.00 3.41
2969 3055 0.883833 GCCATGGGAGTGTTTGTCTG 59.116 55.000 15.13 0.00 0.00 3.51
2970 3056 1.819305 GCCATGGGAGTGTTTGTCTGT 60.819 52.381 15.13 0.00 0.00 3.41
2971 3057 2.552155 GCCATGGGAGTGTTTGTCTGTA 60.552 50.000 15.13 0.00 0.00 2.74
2972 3058 3.338249 CCATGGGAGTGTTTGTCTGTAG 58.662 50.000 2.85 0.00 0.00 2.74
2973 3059 3.244561 CCATGGGAGTGTTTGTCTGTAGT 60.245 47.826 2.85 0.00 0.00 2.73
2974 3060 4.020573 CCATGGGAGTGTTTGTCTGTAGTA 60.021 45.833 2.85 0.00 0.00 1.82
2975 3061 4.595762 TGGGAGTGTTTGTCTGTAGTAC 57.404 45.455 0.00 0.00 0.00 2.73
2976 3062 3.962063 TGGGAGTGTTTGTCTGTAGTACA 59.038 43.478 2.36 2.36 0.00 2.90
2977 3063 4.202182 TGGGAGTGTTTGTCTGTAGTACAC 60.202 45.833 0.00 0.00 39.41 2.90
2978 3064 4.202182 GGGAGTGTTTGTCTGTAGTACACA 60.202 45.833 0.00 0.00 41.07 3.72
2979 3065 5.353938 GGAGTGTTTGTCTGTAGTACACAA 58.646 41.667 0.00 0.51 41.07 3.33
2980 3066 5.462398 GGAGTGTTTGTCTGTAGTACACAAG 59.538 44.000 0.00 0.00 41.07 3.16
2981 3067 6.216801 AGTGTTTGTCTGTAGTACACAAGA 57.783 37.500 0.00 0.00 41.07 3.02
2982 3068 6.636705 AGTGTTTGTCTGTAGTACACAAGAA 58.363 36.000 0.00 0.00 41.07 2.52
2983 3069 7.272978 AGTGTTTGTCTGTAGTACACAAGAAT 58.727 34.615 0.00 0.00 41.07 2.40
2984 3070 7.438459 AGTGTTTGTCTGTAGTACACAAGAATC 59.562 37.037 0.00 0.00 41.07 2.52
2985 3071 7.223971 GTGTTTGTCTGTAGTACACAAGAATCA 59.776 37.037 0.00 0.00 39.05 2.57
2986 3072 7.223971 TGTTTGTCTGTAGTACACAAGAATCAC 59.776 37.037 0.00 0.00 36.48 3.06
2987 3073 5.779922 TGTCTGTAGTACACAAGAATCACC 58.220 41.667 0.00 0.00 36.48 4.02
2988 3074 4.857588 GTCTGTAGTACACAAGAATCACCG 59.142 45.833 0.00 0.00 36.48 4.94
2989 3075 3.581755 TGTAGTACACAAGAATCACCGC 58.418 45.455 0.00 0.00 32.95 5.68
2990 3076 1.710013 AGTACACAAGAATCACCGCG 58.290 50.000 0.00 0.00 0.00 6.46
2991 3077 0.719465 GTACACAAGAATCACCGCGG 59.281 55.000 26.86 26.86 0.00 6.46
2992 3078 1.017177 TACACAAGAATCACCGCGGC 61.017 55.000 28.58 8.62 0.00 6.53
2993 3079 2.031919 ACAAGAATCACCGCGGCA 59.968 55.556 28.58 13.44 0.00 5.69
2994 3080 1.377202 ACAAGAATCACCGCGGCAT 60.377 52.632 28.58 15.48 0.00 4.40
2995 3081 0.107897 ACAAGAATCACCGCGGCATA 60.108 50.000 28.58 11.66 0.00 3.14
2996 3082 1.229428 CAAGAATCACCGCGGCATAT 58.771 50.000 28.58 13.74 0.00 1.78
2997 3083 2.224185 ACAAGAATCACCGCGGCATATA 60.224 45.455 28.58 6.49 0.00 0.86
2998 3084 3.002791 CAAGAATCACCGCGGCATATAT 58.997 45.455 28.58 8.85 0.00 0.86
2999 3085 3.334583 AGAATCACCGCGGCATATATT 57.665 42.857 28.58 17.20 0.00 1.28
3000 3086 3.674997 AGAATCACCGCGGCATATATTT 58.325 40.909 28.58 9.45 0.00 1.40
3001 3087 3.436704 AGAATCACCGCGGCATATATTTG 59.563 43.478 28.58 13.86 0.00 2.32
3002 3088 1.518325 TCACCGCGGCATATATTTGG 58.482 50.000 28.58 1.80 0.00 3.28
3003 3089 0.109781 CACCGCGGCATATATTTGGC 60.110 55.000 28.58 9.30 38.71 4.52
3004 3090 0.536233 ACCGCGGCATATATTTGGCA 60.536 50.000 28.58 0.00 41.97 4.92
3005 3091 0.109781 CCGCGGCATATATTTGGCAC 60.110 55.000 14.67 8.68 41.97 5.01
3006 3092 0.874390 CGCGGCATATATTTGGCACT 59.126 50.000 17.56 0.00 41.97 4.40
3007 3093 1.400113 CGCGGCATATATTTGGCACTG 60.400 52.381 17.56 5.03 41.97 3.66
3008 3094 1.666888 GCGGCATATATTTGGCACTGC 60.667 52.381 17.56 10.31 41.97 4.40
3025 3111 4.765449 CCAGGCTGCTGCGCTACA 62.765 66.667 9.56 5.78 40.82 2.74
3032 3118 3.248043 TGCTGCGCTACAGGAATTT 57.752 47.368 9.73 0.00 44.73 1.82
3033 3119 1.533625 TGCTGCGCTACAGGAATTTT 58.466 45.000 9.73 0.00 44.73 1.82
3034 3120 1.885887 TGCTGCGCTACAGGAATTTTT 59.114 42.857 9.73 0.00 44.73 1.94
3097 3183 5.432885 AAAAACTTGGTTGGTCATCGTAG 57.567 39.130 0.00 0.00 0.00 3.51
3098 3184 2.094762 ACTTGGTTGGTCATCGTAGC 57.905 50.000 0.00 0.00 0.00 3.58
3099 3185 1.346395 ACTTGGTTGGTCATCGTAGCA 59.654 47.619 0.00 0.00 0.00 3.49
3100 3186 2.002586 CTTGGTTGGTCATCGTAGCAG 58.997 52.381 0.00 0.00 0.00 4.24
3101 3187 1.262417 TGGTTGGTCATCGTAGCAGA 58.738 50.000 0.00 0.00 0.00 4.26
3102 3188 1.621317 TGGTTGGTCATCGTAGCAGAA 59.379 47.619 0.00 0.00 0.00 3.02
3103 3189 2.037902 TGGTTGGTCATCGTAGCAGAAA 59.962 45.455 0.00 0.00 0.00 2.52
3104 3190 3.071479 GGTTGGTCATCGTAGCAGAAAA 58.929 45.455 0.00 0.00 0.00 2.29
3105 3191 3.689649 GGTTGGTCATCGTAGCAGAAAAT 59.310 43.478 0.00 0.00 0.00 1.82
3106 3192 4.201822 GGTTGGTCATCGTAGCAGAAAATC 60.202 45.833 0.00 0.00 0.00 2.17
3107 3193 4.471904 TGGTCATCGTAGCAGAAAATCT 57.528 40.909 0.00 0.00 0.00 2.40
3108 3194 5.592104 TGGTCATCGTAGCAGAAAATCTA 57.408 39.130 0.00 0.00 0.00 1.98
3109 3195 5.592054 TGGTCATCGTAGCAGAAAATCTAG 58.408 41.667 0.00 0.00 0.00 2.43
3110 3196 5.127194 TGGTCATCGTAGCAGAAAATCTAGT 59.873 40.000 0.00 0.00 0.00 2.57
3111 3197 6.320418 TGGTCATCGTAGCAGAAAATCTAGTA 59.680 38.462 0.00 0.00 0.00 1.82
3112 3198 7.147966 TGGTCATCGTAGCAGAAAATCTAGTAA 60.148 37.037 0.00 0.00 0.00 2.24
3113 3199 7.868415 GGTCATCGTAGCAGAAAATCTAGTAAT 59.132 37.037 0.00 0.00 0.00 1.89
3114 3200 9.894783 GTCATCGTAGCAGAAAATCTAGTAATA 57.105 33.333 0.00 0.00 0.00 0.98
3116 3202 9.900710 CATCGTAGCAGAAAATCTAGTAATAGT 57.099 33.333 0.00 0.00 0.00 2.12
3131 3217 9.305555 TCTAGTAATAGTAATAATTGGGCGAGT 57.694 33.333 0.00 0.00 0.00 4.18
3137 3223 9.490379 AATAGTAATAATTGGGCGAGTAAAGAG 57.510 33.333 0.00 0.00 0.00 2.85
3138 3224 6.885922 AGTAATAATTGGGCGAGTAAAGAGT 58.114 36.000 0.00 0.00 0.00 3.24
3139 3225 6.761714 AGTAATAATTGGGCGAGTAAAGAGTG 59.238 38.462 0.00 0.00 0.00 3.51
3140 3226 1.739067 ATTGGGCGAGTAAAGAGTGC 58.261 50.000 0.00 0.00 0.00 4.40
3141 3227 0.685097 TTGGGCGAGTAAAGAGTGCT 59.315 50.000 0.00 0.00 0.00 4.40
3142 3228 0.246635 TGGGCGAGTAAAGAGTGCTC 59.753 55.000 0.00 0.00 35.73 4.26
3143 3229 0.246635 GGGCGAGTAAAGAGTGCTCA 59.753 55.000 1.82 0.00 38.82 4.26
3144 3230 1.337823 GGGCGAGTAAAGAGTGCTCAA 60.338 52.381 1.82 0.00 38.82 3.02
3145 3231 2.413837 GGCGAGTAAAGAGTGCTCAAA 58.586 47.619 1.82 0.00 38.82 2.69
3146 3232 2.157863 GGCGAGTAAAGAGTGCTCAAAC 59.842 50.000 1.82 0.00 38.82 2.93
3147 3233 2.157863 GCGAGTAAAGAGTGCTCAAACC 59.842 50.000 1.82 0.00 38.82 3.27
3148 3234 2.408704 CGAGTAAAGAGTGCTCAAACCG 59.591 50.000 1.82 0.00 38.82 4.44
3149 3235 3.650139 GAGTAAAGAGTGCTCAAACCGA 58.350 45.455 1.82 0.00 38.74 4.69
3150 3236 4.246458 GAGTAAAGAGTGCTCAAACCGAT 58.754 43.478 1.82 0.00 38.74 4.18
3151 3237 4.246458 AGTAAAGAGTGCTCAAACCGATC 58.754 43.478 1.82 0.00 0.00 3.69
3152 3238 3.409026 AAAGAGTGCTCAAACCGATCT 57.591 42.857 1.82 0.00 0.00 2.75
3153 3239 2.376808 AGAGTGCTCAAACCGATCTG 57.623 50.000 1.82 0.00 0.00 2.90
3154 3240 1.895798 AGAGTGCTCAAACCGATCTGA 59.104 47.619 1.82 0.00 0.00 3.27
3155 3241 2.499289 AGAGTGCTCAAACCGATCTGAT 59.501 45.455 1.82 0.00 0.00 2.90
3156 3242 2.863137 GAGTGCTCAAACCGATCTGATC 59.137 50.000 7.60 7.60 0.00 2.92
3157 3243 2.499289 AGTGCTCAAACCGATCTGATCT 59.501 45.455 15.16 0.00 0.00 2.75
3158 3244 2.606725 GTGCTCAAACCGATCTGATCTG 59.393 50.000 15.16 11.27 0.00 2.90
3159 3245 2.497273 TGCTCAAACCGATCTGATCTGA 59.503 45.455 14.82 10.59 0.00 3.27
3160 3246 2.863137 GCTCAAACCGATCTGATCTGAC 59.137 50.000 14.82 4.55 0.00 3.51
3161 3247 3.452474 CTCAAACCGATCTGATCTGACC 58.548 50.000 14.82 0.00 0.00 4.02
3162 3248 2.159240 TCAAACCGATCTGATCTGACCG 60.159 50.000 14.82 9.30 0.00 4.79
3163 3249 0.747255 AACCGATCTGATCTGACCGG 59.253 55.000 28.50 28.50 42.30 5.28
3164 3250 1.006805 CCGATCTGATCTGACCGGC 60.007 63.158 21.02 3.59 0.00 6.13
3165 3251 1.006805 CGATCTGATCTGACCGGCC 60.007 63.158 15.16 0.00 0.00 6.13
3166 3252 1.369321 GATCTGATCTGACCGGCCC 59.631 63.158 10.37 0.00 0.00 5.80
3167 3253 2.427540 GATCTGATCTGACCGGCCCG 62.428 65.000 10.37 0.00 0.00 6.13
3183 3269 4.157120 CGGATGGGACGGACACCC 62.157 72.222 0.00 0.00 46.87 4.61
3188 3274 3.239253 GGGACGGACACCCACTGT 61.239 66.667 0.00 0.00 46.05 3.55
3189 3275 2.814835 GGGACGGACACCCACTGTT 61.815 63.158 0.00 0.00 46.05 3.16
3190 3276 1.597027 GGACGGACACCCACTGTTG 60.597 63.158 0.00 0.00 31.03 3.33
3191 3277 1.444250 GACGGACACCCACTGTTGA 59.556 57.895 0.00 0.00 31.03 3.18
3192 3278 0.034896 GACGGACACCCACTGTTGAT 59.965 55.000 0.00 0.00 31.03 2.57
3193 3279 0.250295 ACGGACACCCACTGTTGATG 60.250 55.000 0.00 0.00 31.03 3.07
3194 3280 0.250295 CGGACACCCACTGTTGATGT 60.250 55.000 0.00 0.00 31.03 3.06
3195 3281 1.813862 CGGACACCCACTGTTGATGTT 60.814 52.381 0.00 0.00 31.03 2.71
3196 3282 1.608590 GGACACCCACTGTTGATGTTG 59.391 52.381 0.00 0.00 31.03 3.33
3197 3283 2.297701 GACACCCACTGTTGATGTTGT 58.702 47.619 0.00 0.00 31.03 3.32
3198 3284 2.290641 GACACCCACTGTTGATGTTGTC 59.709 50.000 0.00 0.00 31.03 3.18
3199 3285 2.092429 ACACCCACTGTTGATGTTGTCT 60.092 45.455 0.00 0.00 0.00 3.41
3200 3286 2.291465 CACCCACTGTTGATGTTGTCTG 59.709 50.000 0.00 0.00 0.00 3.51
3201 3287 1.881973 CCCACTGTTGATGTTGTCTGG 59.118 52.381 0.00 0.00 0.00 3.86
3202 3288 2.487086 CCCACTGTTGATGTTGTCTGGA 60.487 50.000 0.00 0.00 0.00 3.86
3203 3289 3.213506 CCACTGTTGATGTTGTCTGGAA 58.786 45.455 0.00 0.00 0.00 3.53
3204 3290 3.631686 CCACTGTTGATGTTGTCTGGAAA 59.368 43.478 0.00 0.00 0.00 3.13
3205 3291 4.279169 CCACTGTTGATGTTGTCTGGAAAT 59.721 41.667 0.00 0.00 0.00 2.17
3206 3292 5.473162 CCACTGTTGATGTTGTCTGGAAATA 59.527 40.000 0.00 0.00 0.00 1.40
3207 3293 6.016360 CCACTGTTGATGTTGTCTGGAAATAA 60.016 38.462 0.00 0.00 0.00 1.40
3208 3294 7.309377 CCACTGTTGATGTTGTCTGGAAATAAT 60.309 37.037 0.00 0.00 0.00 1.28
3209 3295 8.084073 CACTGTTGATGTTGTCTGGAAATAATT 58.916 33.333 0.00 0.00 0.00 1.40
3210 3296 8.084073 ACTGTTGATGTTGTCTGGAAATAATTG 58.916 33.333 0.00 0.00 0.00 2.32
3211 3297 7.377398 TGTTGATGTTGTCTGGAAATAATTGG 58.623 34.615 0.00 0.00 0.00 3.16
3212 3298 7.232330 TGTTGATGTTGTCTGGAAATAATTGGA 59.768 33.333 0.00 0.00 0.00 3.53
3213 3299 7.773489 TGATGTTGTCTGGAAATAATTGGAA 57.227 32.000 0.00 0.00 0.00 3.53
3214 3300 7.829725 TGATGTTGTCTGGAAATAATTGGAAG 58.170 34.615 0.00 0.00 0.00 3.46
3215 3301 7.669304 TGATGTTGTCTGGAAATAATTGGAAGA 59.331 33.333 0.00 0.00 0.00 2.87
3216 3302 7.452880 TGTTGTCTGGAAATAATTGGAAGAG 57.547 36.000 0.00 0.00 0.00 2.85
3217 3303 6.071952 TGTTGTCTGGAAATAATTGGAAGAGC 60.072 38.462 0.00 0.00 0.00 4.09
3218 3304 4.635765 TGTCTGGAAATAATTGGAAGAGCG 59.364 41.667 0.00 0.00 0.00 5.03
3219 3305 4.876107 GTCTGGAAATAATTGGAAGAGCGA 59.124 41.667 0.00 0.00 0.00 4.93
3220 3306 5.007136 GTCTGGAAATAATTGGAAGAGCGAG 59.993 44.000 0.00 0.00 0.00 5.03
3221 3307 5.097742 TGGAAATAATTGGAAGAGCGAGA 57.902 39.130 0.00 0.00 0.00 4.04
3222 3308 5.118990 TGGAAATAATTGGAAGAGCGAGAG 58.881 41.667 0.00 0.00 0.00 3.20
3223 3309 5.104941 TGGAAATAATTGGAAGAGCGAGAGA 60.105 40.000 0.00 0.00 0.00 3.10
3224 3310 5.465056 GGAAATAATTGGAAGAGCGAGAGAG 59.535 44.000 0.00 0.00 0.00 3.20
3225 3311 5.860941 AATAATTGGAAGAGCGAGAGAGA 57.139 39.130 0.00 0.00 0.00 3.10
3226 3312 6.418057 AATAATTGGAAGAGCGAGAGAGAT 57.582 37.500 0.00 0.00 0.00 2.75
3227 3313 3.731652 ATTGGAAGAGCGAGAGAGATG 57.268 47.619 0.00 0.00 0.00 2.90
3228 3314 2.426842 TGGAAGAGCGAGAGAGATGA 57.573 50.000 0.00 0.00 0.00 2.92
3229 3315 2.296792 TGGAAGAGCGAGAGAGATGAG 58.703 52.381 0.00 0.00 0.00 2.90
3230 3316 2.092699 TGGAAGAGCGAGAGAGATGAGA 60.093 50.000 0.00 0.00 0.00 3.27
3231 3317 3.149196 GGAAGAGCGAGAGAGATGAGAT 58.851 50.000 0.00 0.00 0.00 2.75
3232 3318 3.189287 GGAAGAGCGAGAGAGATGAGATC 59.811 52.174 0.00 0.00 0.00 2.75
3233 3319 3.777106 AGAGCGAGAGAGATGAGATCT 57.223 47.619 0.00 0.00 43.70 2.75
3234 3320 3.405831 AGAGCGAGAGAGATGAGATCTG 58.594 50.000 0.00 0.00 40.38 2.90
3235 3321 2.485426 GAGCGAGAGAGATGAGATCTGG 59.515 54.545 0.00 0.00 40.38 3.86
3236 3322 2.106338 AGCGAGAGAGATGAGATCTGGA 59.894 50.000 0.00 0.00 40.38 3.86
3237 3323 3.084039 GCGAGAGAGATGAGATCTGGAT 58.916 50.000 0.00 0.00 40.38 3.41
3238 3324 3.507233 GCGAGAGAGATGAGATCTGGATT 59.493 47.826 0.00 0.00 40.38 3.01
3239 3325 4.616604 GCGAGAGAGATGAGATCTGGATTG 60.617 50.000 0.00 0.00 40.38 2.67
3240 3326 4.761227 CGAGAGAGATGAGATCTGGATTGA 59.239 45.833 0.00 0.00 40.38 2.57
3241 3327 5.416639 CGAGAGAGATGAGATCTGGATTGAT 59.583 44.000 0.00 0.00 40.38 2.57
3242 3328 6.071784 CGAGAGAGATGAGATCTGGATTGATT 60.072 42.308 0.00 0.00 40.38 2.57
3243 3329 6.999950 AGAGAGATGAGATCTGGATTGATTG 58.000 40.000 0.00 0.00 40.38 2.67
3244 3330 6.783482 AGAGAGATGAGATCTGGATTGATTGA 59.217 38.462 0.00 0.00 40.38 2.57
3245 3331 6.761312 AGAGATGAGATCTGGATTGATTGAC 58.239 40.000 0.00 0.00 40.38 3.18
3246 3332 6.555738 AGAGATGAGATCTGGATTGATTGACT 59.444 38.462 0.00 0.00 40.38 3.41
3247 3333 6.526526 AGATGAGATCTGGATTGATTGACTG 58.473 40.000 0.00 0.00 38.44 3.51
3248 3334 5.688814 TGAGATCTGGATTGATTGACTGT 57.311 39.130 0.00 0.00 0.00 3.55
3249 3335 5.668471 TGAGATCTGGATTGATTGACTGTC 58.332 41.667 0.00 0.00 0.00 3.51
3250 3336 4.691175 AGATCTGGATTGATTGACTGTCG 58.309 43.478 0.00 0.00 0.00 4.35
3251 3337 4.403752 AGATCTGGATTGATTGACTGTCGA 59.596 41.667 0.00 0.00 0.00 4.20
3252 3338 4.743057 TCTGGATTGATTGACTGTCGAT 57.257 40.909 10.29 10.29 0.00 3.59
3253 3339 4.686972 TCTGGATTGATTGACTGTCGATC 58.313 43.478 24.84 24.84 37.70 3.69
3254 3340 3.447742 TGGATTGATTGACTGTCGATCG 58.552 45.455 25.44 9.36 39.60 3.69
3255 3341 3.130340 TGGATTGATTGACTGTCGATCGA 59.870 43.478 23.86 23.86 39.60 3.59
3256 3342 4.202151 TGGATTGATTGACTGTCGATCGAT 60.202 41.667 29.06 29.06 41.80 3.59
3257 3343 5.493397 GATTGATTGACTGTCGATCGATC 57.507 43.478 32.88 32.88 44.66 3.69
3258 3344 4.087789 GATTGATTGACTGTCGATCGATCG 59.912 45.833 32.88 35.91 43.26 3.69
3267 3353 2.639853 GATCGATCGAGCCAGCGA 59.360 61.111 22.32 0.00 45.22 4.93
3268 3354 1.441849 GATCGATCGAGCCAGCGAG 60.442 63.158 22.32 0.00 44.26 5.03
3269 3355 1.846849 GATCGATCGAGCCAGCGAGA 61.847 60.000 22.32 0.00 44.26 4.04
3270 3356 1.851021 ATCGATCGAGCCAGCGAGAG 61.851 60.000 23.84 0.00 44.26 3.20
3271 3357 2.829206 CGATCGAGCCAGCGAGAGT 61.829 63.158 10.26 0.00 44.26 3.24
3272 3358 1.499688 CGATCGAGCCAGCGAGAGTA 61.500 60.000 10.26 0.00 44.26 2.59
3273 3359 0.663688 GATCGAGCCAGCGAGAGTAA 59.336 55.000 0.00 0.00 44.26 2.24
3274 3360 1.065701 GATCGAGCCAGCGAGAGTAAA 59.934 52.381 0.00 0.00 44.26 2.01
3275 3361 1.103803 TCGAGCCAGCGAGAGTAAAT 58.896 50.000 0.00 0.00 35.01 1.40
3276 3362 2.294979 TCGAGCCAGCGAGAGTAAATA 58.705 47.619 0.00 0.00 35.01 1.40
3277 3363 2.290916 TCGAGCCAGCGAGAGTAAATAG 59.709 50.000 0.00 0.00 35.01 1.73
3278 3364 2.399448 GAGCCAGCGAGAGTAAATAGC 58.601 52.381 0.00 0.00 0.00 2.97
3279 3365 1.757118 AGCCAGCGAGAGTAAATAGCA 59.243 47.619 0.00 0.00 0.00 3.49
3280 3366 2.366916 AGCCAGCGAGAGTAAATAGCAT 59.633 45.455 0.00 0.00 0.00 3.79
3281 3367 3.574396 AGCCAGCGAGAGTAAATAGCATA 59.426 43.478 0.00 0.00 0.00 3.14
3282 3368 4.039245 AGCCAGCGAGAGTAAATAGCATAA 59.961 41.667 0.00 0.00 0.00 1.90
3283 3369 4.750098 GCCAGCGAGAGTAAATAGCATAAA 59.250 41.667 0.00 0.00 0.00 1.40
3284 3370 5.236478 GCCAGCGAGAGTAAATAGCATAAAA 59.764 40.000 0.00 0.00 0.00 1.52
3285 3371 6.650372 CCAGCGAGAGTAAATAGCATAAAAC 58.350 40.000 0.00 0.00 0.00 2.43
3286 3372 6.480320 CCAGCGAGAGTAAATAGCATAAAACT 59.520 38.462 0.00 0.00 0.00 2.66
3287 3373 7.652105 CCAGCGAGAGTAAATAGCATAAAACTA 59.348 37.037 0.00 0.00 0.00 2.24
3288 3374 8.480853 CAGCGAGAGTAAATAGCATAAAACTAC 58.519 37.037 0.00 0.00 0.00 2.73
3289 3375 8.414778 AGCGAGAGTAAATAGCATAAAACTACT 58.585 33.333 0.00 0.00 0.00 2.57
3290 3376 9.674824 GCGAGAGTAAATAGCATAAAACTACTA 57.325 33.333 0.00 0.00 0.00 1.82
3306 3392 7.862274 AAACTACTACTTTACAGGTTAGGGT 57.138 36.000 0.00 0.00 0.00 4.34
3307 3393 7.862274 AACTACTACTTTACAGGTTAGGGTT 57.138 36.000 0.00 0.00 0.00 4.11
3308 3394 7.473735 ACTACTACTTTACAGGTTAGGGTTC 57.526 40.000 0.00 0.00 0.00 3.62
3309 3395 5.752036 ACTACTTTACAGGTTAGGGTTCC 57.248 43.478 0.00 0.00 0.00 3.62
3310 3396 5.157395 ACTACTTTACAGGTTAGGGTTCCA 58.843 41.667 0.00 0.00 0.00 3.53
3311 3397 5.608015 ACTACTTTACAGGTTAGGGTTCCAA 59.392 40.000 0.00 0.00 0.00 3.53
3312 3398 5.391577 ACTTTACAGGTTAGGGTTCCAAA 57.608 39.130 0.00 0.00 0.00 3.28
3313 3399 5.768752 ACTTTACAGGTTAGGGTTCCAAAA 58.231 37.500 0.00 0.00 0.00 2.44
3314 3400 6.196434 ACTTTACAGGTTAGGGTTCCAAAAA 58.804 36.000 0.00 0.00 0.00 1.94
3354 3440 7.441890 TTTTTCGCTGATAACTACCAAATCA 57.558 32.000 0.00 0.00 0.00 2.57
3355 3441 6.662414 TTTCGCTGATAACTACCAAATCAG 57.338 37.500 7.10 7.10 46.11 2.90
3356 3442 4.693283 TCGCTGATAACTACCAAATCAGG 58.307 43.478 12.14 4.46 44.39 3.86
3358 3444 4.137543 GCTGATAACTACCAAATCAGGGG 58.862 47.826 12.14 0.00 44.39 4.79
3359 3445 4.385310 GCTGATAACTACCAAATCAGGGGT 60.385 45.833 12.14 0.00 44.39 4.95
3360 3446 5.755849 CTGATAACTACCAAATCAGGGGTT 58.244 41.667 4.07 0.00 41.82 4.11
3361 3447 5.505780 TGATAACTACCAAATCAGGGGTTG 58.494 41.667 0.00 0.00 38.60 3.77
3363 3449 1.272480 ACTACCAAATCAGGGGTTGGC 60.272 52.381 2.37 0.00 46.96 4.52
3364 3450 1.005924 CTACCAAATCAGGGGTTGGCT 59.994 52.381 2.37 0.00 46.96 4.75
3365 3451 0.542702 ACCAAATCAGGGGTTGGCTG 60.543 55.000 2.37 0.00 46.96 4.85
3366 3452 0.542702 CCAAATCAGGGGTTGGCTGT 60.543 55.000 0.00 0.00 38.04 4.40
3367 3453 1.341080 CAAATCAGGGGTTGGCTGTT 58.659 50.000 0.00 0.00 0.00 3.16
3368 3454 1.693606 CAAATCAGGGGTTGGCTGTTT 59.306 47.619 0.00 0.00 0.00 2.83
3369 3455 1.632589 AATCAGGGGTTGGCTGTTTC 58.367 50.000 0.00 0.00 0.00 2.78
3370 3456 0.482446 ATCAGGGGTTGGCTGTTTCA 59.518 50.000 0.00 0.00 0.00 2.69
3371 3457 0.260230 TCAGGGGTTGGCTGTTTCAA 59.740 50.000 0.00 0.00 0.00 2.69
3372 3458 1.118838 CAGGGGTTGGCTGTTTCAAA 58.881 50.000 0.00 0.00 0.00 2.69
3373 3459 1.484240 CAGGGGTTGGCTGTTTCAAAA 59.516 47.619 0.00 0.00 0.00 2.44
3374 3460 2.093235 CAGGGGTTGGCTGTTTCAAAAA 60.093 45.455 0.00 0.00 0.00 1.94
3392 3478 3.398318 AAAACCCCAACTCCTCTTTGT 57.602 42.857 0.00 0.00 0.00 2.83
3393 3479 3.398318 AAACCCCAACTCCTCTTTGTT 57.602 42.857 0.00 0.00 0.00 2.83
3394 3480 4.529716 AAACCCCAACTCCTCTTTGTTA 57.470 40.909 0.00 0.00 0.00 2.41
3395 3481 4.529716 AACCCCAACTCCTCTTTGTTAA 57.470 40.909 0.00 0.00 0.00 2.01
3396 3482 4.529716 ACCCCAACTCCTCTTTGTTAAA 57.470 40.909 0.00 0.00 0.00 1.52
3397 3483 4.874199 ACCCCAACTCCTCTTTGTTAAAA 58.126 39.130 0.00 0.00 0.00 1.52
3398 3484 5.274015 ACCCCAACTCCTCTTTGTTAAAAA 58.726 37.500 0.00 0.00 0.00 1.94
3425 3511 3.508744 CATGTTTATGACAGGTTGGGC 57.491 47.619 0.00 0.00 42.62 5.36
3426 3512 1.917872 TGTTTATGACAGGTTGGGCC 58.082 50.000 0.00 0.00 33.40 5.80
3427 3513 0.808755 GTTTATGACAGGTTGGGCCG 59.191 55.000 0.00 0.00 43.70 6.13
3428 3514 0.963355 TTTATGACAGGTTGGGCCGC 60.963 55.000 0.00 0.00 43.70 6.53
3429 3515 2.830186 TTATGACAGGTTGGGCCGCC 62.830 60.000 0.00 0.00 43.70 6.13
3437 3523 4.572571 TTGGGCCGCCACTCGTTT 62.573 61.111 12.58 0.00 36.19 3.60
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 5.227908 GGTGTAGATCGACTCACAAGAAAA 58.772 41.667 7.51 0.00 32.46 2.29
64 65 5.964758 AGATTTTGCGAGCCATTAATTTGA 58.035 33.333 0.00 0.00 0.00 2.69
67 68 9.683069 CTAATTAGATTTTGCGAGCCATTAATT 57.317 29.630 6.64 0.00 0.00 1.40
69 70 7.138736 GCTAATTAGATTTTGCGAGCCATTAA 58.861 34.615 16.85 0.00 0.00 1.40
73 74 3.002246 CGCTAATTAGATTTTGCGAGCCA 59.998 43.478 16.85 0.00 42.35 4.75
93 94 3.132467 AGACTCCCTAGAAATTACCACGC 59.868 47.826 0.00 0.00 0.00 5.34
1236 1250 3.528853 ACGGACGTGAGGTTGTCA 58.471 55.556 0.00 0.00 36.83 3.58
2711 2796 2.348218 CGTGTTCTTGTACTCGGCAAAC 60.348 50.000 0.00 0.00 32.95 2.93
2768 2854 2.104281 GTGGCTCCTATTTATCGGGTGT 59.896 50.000 0.00 0.00 0.00 4.16
2830 2916 3.935203 AGTGACAAATTATCCAGTGCTCG 59.065 43.478 0.00 0.00 0.00 5.03
2831 2917 4.437930 GCAGTGACAAATTATCCAGTGCTC 60.438 45.833 18.57 0.00 46.63 4.26
2832 2918 3.441572 GCAGTGACAAATTATCCAGTGCT 59.558 43.478 18.57 0.00 46.63 4.40
2833 2919 3.762779 GCAGTGACAAATTATCCAGTGC 58.237 45.455 14.01 14.01 45.04 4.40
2834 2920 3.758023 TGGCAGTGACAAATTATCCAGTG 59.242 43.478 0.00 0.00 34.16 3.66
2835 2921 4.032960 TGGCAGTGACAAATTATCCAGT 57.967 40.909 0.00 0.00 0.00 4.00
2836 2922 4.735578 GCATGGCAGTGACAAATTATCCAG 60.736 45.833 0.77 0.00 0.00 3.86
2837 2923 3.130869 GCATGGCAGTGACAAATTATCCA 59.869 43.478 0.77 0.00 0.00 3.41
2838 2924 3.491447 GGCATGGCAGTGACAAATTATCC 60.491 47.826 15.47 0.00 0.00 2.59
2839 2925 3.130869 TGGCATGGCAGTGACAAATTATC 59.869 43.478 19.43 0.00 33.24 1.75
2840 2926 3.098377 TGGCATGGCAGTGACAAATTAT 58.902 40.909 19.43 0.00 33.24 1.28
2841 2927 2.523245 TGGCATGGCAGTGACAAATTA 58.477 42.857 19.43 0.00 33.24 1.40
2842 2928 1.340088 TGGCATGGCAGTGACAAATT 58.660 45.000 19.43 0.00 33.24 1.82
2843 2929 1.340088 TTGGCATGGCAGTGACAAAT 58.660 45.000 22.17 0.00 43.81 2.32
2844 2930 2.818111 TTGGCATGGCAGTGACAAA 58.182 47.368 22.17 2.47 43.81 2.83
2845 2931 1.794151 CGTTGGCATGGCAGTGACAA 61.794 55.000 22.17 12.29 44.53 3.18
2846 2932 2.260154 CGTTGGCATGGCAGTGACA 61.260 57.895 22.17 0.00 34.69 3.58
2847 2933 0.953471 TACGTTGGCATGGCAGTGAC 60.953 55.000 22.17 16.32 0.00 3.67
2848 2934 0.953471 GTACGTTGGCATGGCAGTGA 60.953 55.000 22.17 4.91 0.00 3.41
2849 2935 0.955428 AGTACGTTGGCATGGCAGTG 60.955 55.000 22.17 19.55 0.00 3.66
2850 2936 0.955428 CAGTACGTTGGCATGGCAGT 60.955 55.000 22.17 19.09 0.00 4.40
2851 2937 0.673333 TCAGTACGTTGGCATGGCAG 60.673 55.000 22.17 14.14 0.00 4.85
2852 2938 0.035534 ATCAGTACGTTGGCATGGCA 60.036 50.000 19.43 19.43 0.00 4.92
2853 2939 1.064060 GAATCAGTACGTTGGCATGGC 59.936 52.381 13.29 13.29 0.00 4.40
2854 2940 2.355197 TGAATCAGTACGTTGGCATGG 58.645 47.619 0.00 0.00 0.00 3.66
2855 2941 4.418013 TTTGAATCAGTACGTTGGCATG 57.582 40.909 0.00 0.00 0.00 4.06
2856 2942 4.518970 AGTTTTGAATCAGTACGTTGGCAT 59.481 37.500 0.00 0.00 0.00 4.40
2857 2943 3.880490 AGTTTTGAATCAGTACGTTGGCA 59.120 39.130 0.00 0.00 0.00 4.92
2858 2944 4.219033 CAGTTTTGAATCAGTACGTTGGC 58.781 43.478 0.00 0.00 0.00 4.52
2859 2945 5.418310 ACAGTTTTGAATCAGTACGTTGG 57.582 39.130 0.00 0.00 0.00 3.77
2860 2946 7.173863 ACTACAGTTTTGAATCAGTACGTTG 57.826 36.000 0.00 0.00 0.00 4.10
2861 2947 8.139989 ACTACTACAGTTTTGAATCAGTACGTT 58.860 33.333 0.00 0.00 31.59 3.99
2862 2948 7.655490 ACTACTACAGTTTTGAATCAGTACGT 58.345 34.615 0.00 0.00 31.59 3.57
2863 2949 9.059485 GTACTACTACAGTTTTGAATCAGTACG 57.941 37.037 0.00 0.00 38.80 3.67
2864 2950 9.059485 CGTACTACTACAGTTTTGAATCAGTAC 57.941 37.037 0.00 0.00 38.80 2.73
2865 2951 7.752239 GCGTACTACTACAGTTTTGAATCAGTA 59.248 37.037 0.00 0.00 38.80 2.74
2866 2952 6.585322 GCGTACTACTACAGTTTTGAATCAGT 59.415 38.462 0.00 0.00 38.80 3.41
2867 2953 6.584942 TGCGTACTACTACAGTTTTGAATCAG 59.415 38.462 0.00 0.00 38.80 2.90
2868 2954 6.448852 TGCGTACTACTACAGTTTTGAATCA 58.551 36.000 0.00 0.00 38.80 2.57
2869 2955 6.034683 CCTGCGTACTACTACAGTTTTGAATC 59.965 42.308 0.00 0.00 38.80 2.52
2870 2956 5.867716 CCTGCGTACTACTACAGTTTTGAAT 59.132 40.000 0.00 0.00 38.80 2.57
2871 2957 5.224888 CCTGCGTACTACTACAGTTTTGAA 58.775 41.667 0.00 0.00 38.80 2.69
2872 2958 4.801891 CCTGCGTACTACTACAGTTTTGA 58.198 43.478 0.00 0.00 38.80 2.69
2873 2959 3.367025 GCCTGCGTACTACTACAGTTTTG 59.633 47.826 0.00 0.00 38.80 2.44
2874 2960 3.006110 TGCCTGCGTACTACTACAGTTTT 59.994 43.478 0.00 0.00 38.80 2.43
2875 2961 2.559668 TGCCTGCGTACTACTACAGTTT 59.440 45.455 0.00 0.00 38.80 2.66
2876 2962 2.165167 TGCCTGCGTACTACTACAGTT 58.835 47.619 0.00 0.00 38.80 3.16
2877 2963 1.830279 TGCCTGCGTACTACTACAGT 58.170 50.000 0.00 0.00 41.62 3.55
2878 2964 2.543861 CCATGCCTGCGTACTACTACAG 60.544 54.545 0.00 0.00 0.00 2.74
2879 2965 1.407618 CCATGCCTGCGTACTACTACA 59.592 52.381 0.00 0.00 0.00 2.74
2880 2966 1.269621 CCCATGCCTGCGTACTACTAC 60.270 57.143 0.00 0.00 0.00 2.73
2881 2967 1.037493 CCCATGCCTGCGTACTACTA 58.963 55.000 0.00 0.00 0.00 1.82
2882 2968 0.686441 TCCCATGCCTGCGTACTACT 60.686 55.000 0.00 0.00 0.00 2.57
2883 2969 0.249489 CTCCCATGCCTGCGTACTAC 60.249 60.000 0.00 0.00 0.00 2.73
2884 2970 0.686441 ACTCCCATGCCTGCGTACTA 60.686 55.000 0.00 0.00 0.00 1.82
2885 2971 1.990060 ACTCCCATGCCTGCGTACT 60.990 57.895 0.00 0.00 0.00 2.73
2886 2972 1.815421 CACTCCCATGCCTGCGTAC 60.815 63.158 0.00 0.00 0.00 3.67
2887 2973 1.836999 AACACTCCCATGCCTGCGTA 61.837 55.000 0.00 0.00 0.00 4.42
2888 2974 2.697147 AAACACTCCCATGCCTGCGT 62.697 55.000 0.00 0.00 0.00 5.24
2889 2975 1.973281 AAACACTCCCATGCCTGCG 60.973 57.895 0.00 0.00 0.00 5.18
2890 2976 1.181098 ACAAACACTCCCATGCCTGC 61.181 55.000 0.00 0.00 0.00 4.85
2891 2977 0.883833 GACAAACACTCCCATGCCTG 59.116 55.000 0.00 0.00 0.00 4.85
2892 2978 0.773644 AGACAAACACTCCCATGCCT 59.226 50.000 0.00 0.00 0.00 4.75
2893 2979 0.883833 CAGACAAACACTCCCATGCC 59.116 55.000 0.00 0.00 0.00 4.40
2894 2980 1.609208 ACAGACAAACACTCCCATGC 58.391 50.000 0.00 0.00 0.00 4.06
2895 2981 4.821805 ACTTTACAGACAAACACTCCCATG 59.178 41.667 0.00 0.00 0.00 3.66
2896 2982 5.048846 ACTTTACAGACAAACACTCCCAT 57.951 39.130 0.00 0.00 0.00 4.00
2897 2983 4.497291 ACTTTACAGACAAACACTCCCA 57.503 40.909 0.00 0.00 0.00 4.37
2898 2984 4.036380 CCAACTTTACAGACAAACACTCCC 59.964 45.833 0.00 0.00 0.00 4.30
2899 2985 4.879545 TCCAACTTTACAGACAAACACTCC 59.120 41.667 0.00 0.00 0.00 3.85
2900 2986 6.619801 ATCCAACTTTACAGACAAACACTC 57.380 37.500 0.00 0.00 0.00 3.51
2901 2987 8.514330 TTTATCCAACTTTACAGACAAACACT 57.486 30.769 0.00 0.00 0.00 3.55
2914 3000 8.515414 GCAGTCTCTGTTTATTTATCCAACTTT 58.485 33.333 0.00 0.00 33.43 2.66
2915 3001 7.121315 GGCAGTCTCTGTTTATTTATCCAACTT 59.879 37.037 0.00 0.00 33.43 2.66
2916 3002 6.599638 GGCAGTCTCTGTTTATTTATCCAACT 59.400 38.462 0.00 0.00 33.43 3.16
2917 3003 6.374333 TGGCAGTCTCTGTTTATTTATCCAAC 59.626 38.462 0.00 0.00 33.43 3.77
2918 3004 6.480763 TGGCAGTCTCTGTTTATTTATCCAA 58.519 36.000 0.00 0.00 33.43 3.53
2919 3005 6.061022 TGGCAGTCTCTGTTTATTTATCCA 57.939 37.500 0.00 0.00 33.43 3.41
2920 3006 5.529060 CCTGGCAGTCTCTGTTTATTTATCC 59.471 44.000 14.43 0.00 33.43 2.59
2921 3007 5.008118 GCCTGGCAGTCTCTGTTTATTTATC 59.992 44.000 15.17 0.00 33.43 1.75
2922 3008 4.884164 GCCTGGCAGTCTCTGTTTATTTAT 59.116 41.667 15.17 0.00 33.43 1.40
2923 3009 4.019321 AGCCTGGCAGTCTCTGTTTATTTA 60.019 41.667 22.65 0.00 33.43 1.40
2924 3010 3.084786 GCCTGGCAGTCTCTGTTTATTT 58.915 45.455 15.17 0.00 33.43 1.40
2925 3011 2.307098 AGCCTGGCAGTCTCTGTTTATT 59.693 45.455 22.65 0.00 33.43 1.40
2926 3012 1.912043 AGCCTGGCAGTCTCTGTTTAT 59.088 47.619 22.65 0.00 33.43 1.40
2927 3013 1.002430 CAGCCTGGCAGTCTCTGTTTA 59.998 52.381 22.65 0.00 33.43 2.01
2928 3014 0.250640 CAGCCTGGCAGTCTCTGTTT 60.251 55.000 22.65 0.00 33.43 2.83
2929 3015 1.123861 TCAGCCTGGCAGTCTCTGTT 61.124 55.000 22.65 0.00 33.43 3.16
2930 3016 0.908656 ATCAGCCTGGCAGTCTCTGT 60.909 55.000 22.65 6.00 33.43 3.41
2931 3017 0.462225 CATCAGCCTGGCAGTCTCTG 60.462 60.000 22.65 16.20 34.12 3.35
2932 3018 1.906253 CATCAGCCTGGCAGTCTCT 59.094 57.895 22.65 4.59 0.00 3.10
2933 3019 1.818785 GCATCAGCCTGGCAGTCTC 60.819 63.158 22.65 2.92 33.58 3.36
2934 3020 2.271497 GCATCAGCCTGGCAGTCT 59.729 61.111 22.65 2.03 33.58 3.24
2944 3030 0.682209 AACACTCCCATGGCATCAGC 60.682 55.000 6.09 0.00 41.10 4.26
2945 3031 1.475280 CAAACACTCCCATGGCATCAG 59.525 52.381 6.09 1.34 0.00 2.90
2946 3032 1.203038 ACAAACACTCCCATGGCATCA 60.203 47.619 6.09 0.00 0.00 3.07
2947 3033 1.474077 GACAAACACTCCCATGGCATC 59.526 52.381 6.09 0.00 0.00 3.91
2948 3034 1.076024 AGACAAACACTCCCATGGCAT 59.924 47.619 6.09 0.00 0.00 4.40
2949 3035 0.478072 AGACAAACACTCCCATGGCA 59.522 50.000 6.09 0.00 0.00 4.92
2950 3036 0.883833 CAGACAAACACTCCCATGGC 59.116 55.000 6.09 0.00 0.00 4.40
2951 3037 2.276732 ACAGACAAACACTCCCATGG 57.723 50.000 4.14 4.14 0.00 3.66
2952 3038 4.008074 ACTACAGACAAACACTCCCATG 57.992 45.455 0.00 0.00 0.00 3.66
2953 3039 4.591498 TGTACTACAGACAAACACTCCCAT 59.409 41.667 0.00 0.00 0.00 4.00
2954 3040 3.962063 TGTACTACAGACAAACACTCCCA 59.038 43.478 0.00 0.00 0.00 4.37
2955 3041 4.202182 TGTGTACTACAGACAAACACTCCC 60.202 45.833 5.61 0.00 40.78 4.30
2956 3042 4.940463 TGTGTACTACAGACAAACACTCC 58.060 43.478 5.61 0.00 40.78 3.85
2957 3043 6.270815 TCTTGTGTACTACAGACAAACACTC 58.729 40.000 5.61 0.00 39.69 3.51
2958 3044 6.216801 TCTTGTGTACTACAGACAAACACT 57.783 37.500 5.61 0.00 39.69 3.55
2959 3045 6.897259 TTCTTGTGTACTACAGACAAACAC 57.103 37.500 0.00 0.00 39.69 3.32
2960 3046 7.223971 GTGATTCTTGTGTACTACAGACAAACA 59.776 37.037 0.00 0.00 39.69 2.83
2961 3047 7.307219 GGTGATTCTTGTGTACTACAGACAAAC 60.307 40.741 0.00 0.00 39.69 2.93
2962 3048 6.704493 GGTGATTCTTGTGTACTACAGACAAA 59.296 38.462 0.00 0.00 39.69 2.83
2963 3049 6.220930 GGTGATTCTTGTGTACTACAGACAA 58.779 40.000 0.00 0.00 41.10 3.18
2964 3050 5.564063 CGGTGATTCTTGTGTACTACAGACA 60.564 44.000 0.00 0.00 41.10 3.41
2965 3051 4.857588 CGGTGATTCTTGTGTACTACAGAC 59.142 45.833 0.00 0.00 41.10 3.51
2966 3052 4.617530 GCGGTGATTCTTGTGTACTACAGA 60.618 45.833 0.00 0.00 41.10 3.41
2967 3053 3.612860 GCGGTGATTCTTGTGTACTACAG 59.387 47.826 0.00 0.00 41.10 2.74
2968 3054 3.581755 GCGGTGATTCTTGTGTACTACA 58.418 45.455 0.00 0.00 37.56 2.74
2969 3055 2.597305 CGCGGTGATTCTTGTGTACTAC 59.403 50.000 0.00 0.00 0.00 2.73
2970 3056 2.416296 CCGCGGTGATTCTTGTGTACTA 60.416 50.000 19.50 0.00 0.00 1.82
2971 3057 1.671850 CCGCGGTGATTCTTGTGTACT 60.672 52.381 19.50 0.00 0.00 2.73
2972 3058 0.719465 CCGCGGTGATTCTTGTGTAC 59.281 55.000 19.50 0.00 0.00 2.90
2973 3059 1.017177 GCCGCGGTGATTCTTGTGTA 61.017 55.000 28.70 0.00 0.00 2.90
2974 3060 2.325082 GCCGCGGTGATTCTTGTGT 61.325 57.895 28.70 0.00 0.00 3.72
2975 3061 1.647545 ATGCCGCGGTGATTCTTGTG 61.648 55.000 28.70 0.00 0.00 3.33
2976 3062 0.107897 TATGCCGCGGTGATTCTTGT 60.108 50.000 28.70 4.91 0.00 3.16
2977 3063 1.229428 ATATGCCGCGGTGATTCTTG 58.771 50.000 28.70 0.00 0.00 3.02
2978 3064 2.831685 TATATGCCGCGGTGATTCTT 57.168 45.000 28.70 10.08 0.00 2.52
2979 3065 3.334583 AATATATGCCGCGGTGATTCT 57.665 42.857 28.70 12.07 0.00 2.40
2980 3066 3.426159 CCAAATATATGCCGCGGTGATTC 60.426 47.826 28.70 10.19 0.00 2.52
2981 3067 2.487762 CCAAATATATGCCGCGGTGATT 59.512 45.455 28.70 15.49 0.00 2.57
2982 3068 2.083774 CCAAATATATGCCGCGGTGAT 58.916 47.619 28.70 20.83 0.00 3.06
2983 3069 1.518325 CCAAATATATGCCGCGGTGA 58.482 50.000 28.70 14.71 0.00 4.02
2984 3070 0.109781 GCCAAATATATGCCGCGGTG 60.110 55.000 28.70 14.17 0.00 4.94
2985 3071 0.536233 TGCCAAATATATGCCGCGGT 60.536 50.000 28.70 10.76 0.00 5.68
2986 3072 0.109781 GTGCCAAATATATGCCGCGG 60.110 55.000 24.05 24.05 0.00 6.46
2987 3073 0.874390 AGTGCCAAATATATGCCGCG 59.126 50.000 0.00 0.00 0.00 6.46
2988 3074 1.666888 GCAGTGCCAAATATATGCCGC 60.667 52.381 2.85 0.00 0.00 6.53
2989 3075 2.336554 GCAGTGCCAAATATATGCCG 57.663 50.000 2.85 0.00 0.00 5.69
3075 3161 4.261447 GCTACGATGACCAACCAAGTTTTT 60.261 41.667 0.00 0.00 0.00 1.94
3076 3162 3.252458 GCTACGATGACCAACCAAGTTTT 59.748 43.478 0.00 0.00 0.00 2.43
3077 3163 2.812011 GCTACGATGACCAACCAAGTTT 59.188 45.455 0.00 0.00 0.00 2.66
3078 3164 2.224426 TGCTACGATGACCAACCAAGTT 60.224 45.455 0.00 0.00 0.00 2.66
3079 3165 1.346395 TGCTACGATGACCAACCAAGT 59.654 47.619 0.00 0.00 0.00 3.16
3080 3166 2.002586 CTGCTACGATGACCAACCAAG 58.997 52.381 0.00 0.00 0.00 3.61
3081 3167 1.621317 TCTGCTACGATGACCAACCAA 59.379 47.619 0.00 0.00 0.00 3.67
3082 3168 1.262417 TCTGCTACGATGACCAACCA 58.738 50.000 0.00 0.00 0.00 3.67
3083 3169 2.380084 TTCTGCTACGATGACCAACC 57.620 50.000 0.00 0.00 0.00 3.77
3084 3170 4.631813 AGATTTTCTGCTACGATGACCAAC 59.368 41.667 0.00 0.00 0.00 3.77
3085 3171 4.832248 AGATTTTCTGCTACGATGACCAA 58.168 39.130 0.00 0.00 0.00 3.67
3086 3172 4.471904 AGATTTTCTGCTACGATGACCA 57.528 40.909 0.00 0.00 0.00 4.02
3087 3173 5.593010 ACTAGATTTTCTGCTACGATGACC 58.407 41.667 0.00 0.00 0.00 4.02
3088 3174 8.804688 ATTACTAGATTTTCTGCTACGATGAC 57.195 34.615 0.00 0.00 0.00 3.06
3090 3176 9.900710 ACTATTACTAGATTTTCTGCTACGATG 57.099 33.333 0.00 0.00 0.00 3.84
3105 3191 9.305555 ACTCGCCCAATTATTACTATTACTAGA 57.694 33.333 0.00 0.00 0.00 2.43
3111 3197 9.490379 CTCTTTACTCGCCCAATTATTACTATT 57.510 33.333 0.00 0.00 0.00 1.73
3112 3198 8.648693 ACTCTTTACTCGCCCAATTATTACTAT 58.351 33.333 0.00 0.00 0.00 2.12
3113 3199 7.924412 CACTCTTTACTCGCCCAATTATTACTA 59.076 37.037 0.00 0.00 0.00 1.82
3114 3200 6.761714 CACTCTTTACTCGCCCAATTATTACT 59.238 38.462 0.00 0.00 0.00 2.24
3115 3201 6.511282 GCACTCTTTACTCGCCCAATTATTAC 60.511 42.308 0.00 0.00 0.00 1.89
3116 3202 5.526111 GCACTCTTTACTCGCCCAATTATTA 59.474 40.000 0.00 0.00 0.00 0.98
3117 3203 4.335594 GCACTCTTTACTCGCCCAATTATT 59.664 41.667 0.00 0.00 0.00 1.40
3118 3204 3.877508 GCACTCTTTACTCGCCCAATTAT 59.122 43.478 0.00 0.00 0.00 1.28
3119 3205 3.055385 AGCACTCTTTACTCGCCCAATTA 60.055 43.478 0.00 0.00 0.00 1.40
3120 3206 2.084546 GCACTCTTTACTCGCCCAATT 58.915 47.619 0.00 0.00 0.00 2.32
3121 3207 1.279271 AGCACTCTTTACTCGCCCAAT 59.721 47.619 0.00 0.00 0.00 3.16
3122 3208 0.685097 AGCACTCTTTACTCGCCCAA 59.315 50.000 0.00 0.00 0.00 4.12
3123 3209 0.246635 GAGCACTCTTTACTCGCCCA 59.753 55.000 0.00 0.00 0.00 5.36
3124 3210 0.246635 TGAGCACTCTTTACTCGCCC 59.753 55.000 0.00 0.00 32.98 6.13
3125 3211 2.080286 TTGAGCACTCTTTACTCGCC 57.920 50.000 0.00 0.00 32.98 5.54
3126 3212 2.157863 GGTTTGAGCACTCTTTACTCGC 59.842 50.000 0.00 0.00 32.98 5.03
3127 3213 2.408704 CGGTTTGAGCACTCTTTACTCG 59.591 50.000 0.00 0.00 32.98 4.18
3128 3214 3.650139 TCGGTTTGAGCACTCTTTACTC 58.350 45.455 0.00 0.00 0.00 2.59
3129 3215 3.746045 TCGGTTTGAGCACTCTTTACT 57.254 42.857 0.00 0.00 0.00 2.24
3130 3216 4.092091 CAGATCGGTTTGAGCACTCTTTAC 59.908 45.833 0.00 0.00 34.70 2.01
3131 3217 4.021456 TCAGATCGGTTTGAGCACTCTTTA 60.021 41.667 0.00 0.00 34.70 1.85
3132 3218 3.070018 CAGATCGGTTTGAGCACTCTTT 58.930 45.455 0.00 0.00 34.70 2.52
3133 3219 2.300152 TCAGATCGGTTTGAGCACTCTT 59.700 45.455 0.00 0.00 34.70 2.85
3134 3220 1.895798 TCAGATCGGTTTGAGCACTCT 59.104 47.619 0.00 0.00 34.70 3.24
3135 3221 2.370281 TCAGATCGGTTTGAGCACTC 57.630 50.000 0.00 0.00 34.70 3.51
3136 3222 2.499289 AGATCAGATCGGTTTGAGCACT 59.501 45.455 7.25 0.00 34.70 4.40
3137 3223 2.606725 CAGATCAGATCGGTTTGAGCAC 59.393 50.000 7.25 0.00 34.70 4.40
3138 3224 2.497273 TCAGATCAGATCGGTTTGAGCA 59.503 45.455 7.25 0.00 34.70 4.26
3139 3225 2.863137 GTCAGATCAGATCGGTTTGAGC 59.137 50.000 10.03 0.00 0.00 4.26
3140 3226 3.452474 GGTCAGATCAGATCGGTTTGAG 58.548 50.000 10.03 0.00 0.00 3.02
3141 3227 2.159240 CGGTCAGATCAGATCGGTTTGA 60.159 50.000 12.58 3.62 38.43 2.69
3142 3228 2.196749 CGGTCAGATCAGATCGGTTTG 58.803 52.381 12.58 1.34 38.43 2.93
3143 3229 2.586258 CGGTCAGATCAGATCGGTTT 57.414 50.000 12.58 0.00 38.43 3.27
3147 3233 1.006805 GGCCGGTCAGATCAGATCG 60.007 63.158 13.38 13.38 41.63 3.69
3148 3234 1.369321 GGGCCGGTCAGATCAGATC 59.631 63.158 9.07 1.64 0.00 2.75
3149 3235 2.502492 CGGGCCGGTCAGATCAGAT 61.502 63.158 20.56 0.00 0.00 2.90
3150 3236 3.147595 CGGGCCGGTCAGATCAGA 61.148 66.667 20.56 0.00 0.00 3.27
3151 3237 4.227134 CCGGGCCGGTCAGATCAG 62.227 72.222 36.52 7.82 42.73 2.90
3165 3251 4.157120 GGTGTCCGTCCCATCCGG 62.157 72.222 0.00 0.00 46.83 5.14
3166 3252 4.157120 GGGTGTCCGTCCCATCCG 62.157 72.222 0.00 0.00 44.05 4.18
3171 3257 2.814835 AACAGTGGGTGTCCGTCCC 61.815 63.158 0.00 0.00 39.03 4.46
3172 3258 1.597027 CAACAGTGGGTGTCCGTCC 60.597 63.158 0.00 0.00 39.03 4.79
3173 3259 0.034896 ATCAACAGTGGGTGTCCGTC 59.965 55.000 0.00 0.00 39.03 4.79
3174 3260 0.250295 CATCAACAGTGGGTGTCCGT 60.250 55.000 0.00 0.00 39.03 4.69
3175 3261 0.250295 ACATCAACAGTGGGTGTCCG 60.250 55.000 0.00 0.00 39.03 4.79
3176 3262 1.608590 CAACATCAACAGTGGGTGTCC 59.391 52.381 0.00 0.00 39.03 4.02
3177 3263 2.290641 GACAACATCAACAGTGGGTGTC 59.709 50.000 0.00 0.00 39.03 3.67
3178 3264 2.092429 AGACAACATCAACAGTGGGTGT 60.092 45.455 0.00 0.00 43.24 4.16
3179 3265 2.291465 CAGACAACATCAACAGTGGGTG 59.709 50.000 0.00 0.00 0.00 4.61
3180 3266 2.575532 CAGACAACATCAACAGTGGGT 58.424 47.619 0.00 0.00 0.00 4.51
3181 3267 1.881973 CCAGACAACATCAACAGTGGG 59.118 52.381 0.00 0.00 0.00 4.61
3182 3268 2.849942 TCCAGACAACATCAACAGTGG 58.150 47.619 0.00 0.00 0.00 4.00
3183 3269 4.898829 TTTCCAGACAACATCAACAGTG 57.101 40.909 0.00 0.00 0.00 3.66
3184 3270 7.765695 ATTATTTCCAGACAACATCAACAGT 57.234 32.000 0.00 0.00 0.00 3.55
3185 3271 7.543172 CCAATTATTTCCAGACAACATCAACAG 59.457 37.037 0.00 0.00 0.00 3.16
3186 3272 7.232330 TCCAATTATTTCCAGACAACATCAACA 59.768 33.333 0.00 0.00 0.00 3.33
3187 3273 7.601856 TCCAATTATTTCCAGACAACATCAAC 58.398 34.615 0.00 0.00 0.00 3.18
3188 3274 7.773489 TCCAATTATTTCCAGACAACATCAA 57.227 32.000 0.00 0.00 0.00 2.57
3189 3275 7.669304 TCTTCCAATTATTTCCAGACAACATCA 59.331 33.333 0.00 0.00 0.00 3.07
3190 3276 8.055279 TCTTCCAATTATTTCCAGACAACATC 57.945 34.615 0.00 0.00 0.00 3.06
3191 3277 7.363268 GCTCTTCCAATTATTTCCAGACAACAT 60.363 37.037 0.00 0.00 0.00 2.71
3192 3278 6.071952 GCTCTTCCAATTATTTCCAGACAACA 60.072 38.462 0.00 0.00 0.00 3.33
3193 3279 6.325596 GCTCTTCCAATTATTTCCAGACAAC 58.674 40.000 0.00 0.00 0.00 3.32
3194 3280 5.123820 CGCTCTTCCAATTATTTCCAGACAA 59.876 40.000 0.00 0.00 0.00 3.18
3195 3281 4.635765 CGCTCTTCCAATTATTTCCAGACA 59.364 41.667 0.00 0.00 0.00 3.41
3196 3282 4.876107 TCGCTCTTCCAATTATTTCCAGAC 59.124 41.667 0.00 0.00 0.00 3.51
3197 3283 5.097742 TCGCTCTTCCAATTATTTCCAGA 57.902 39.130 0.00 0.00 0.00 3.86
3198 3284 5.118990 TCTCGCTCTTCCAATTATTTCCAG 58.881 41.667 0.00 0.00 0.00 3.86
3199 3285 5.097742 TCTCGCTCTTCCAATTATTTCCA 57.902 39.130 0.00 0.00 0.00 3.53
3200 3286 5.360591 TCTCTCGCTCTTCCAATTATTTCC 58.639 41.667 0.00 0.00 0.00 3.13
3201 3287 6.276847 TCTCTCTCGCTCTTCCAATTATTTC 58.723 40.000 0.00 0.00 0.00 2.17
3202 3288 6.227298 TCTCTCTCGCTCTTCCAATTATTT 57.773 37.500 0.00 0.00 0.00 1.40
3203 3289 5.860941 TCTCTCTCGCTCTTCCAATTATT 57.139 39.130 0.00 0.00 0.00 1.40
3204 3290 5.538053 TCATCTCTCTCGCTCTTCCAATTAT 59.462 40.000 0.00 0.00 0.00 1.28
3205 3291 4.889995 TCATCTCTCTCGCTCTTCCAATTA 59.110 41.667 0.00 0.00 0.00 1.40
3206 3292 3.703556 TCATCTCTCTCGCTCTTCCAATT 59.296 43.478 0.00 0.00 0.00 2.32
3207 3293 3.295093 TCATCTCTCTCGCTCTTCCAAT 58.705 45.455 0.00 0.00 0.00 3.16
3208 3294 2.687425 CTCATCTCTCTCGCTCTTCCAA 59.313 50.000 0.00 0.00 0.00 3.53
3209 3295 2.092699 TCTCATCTCTCTCGCTCTTCCA 60.093 50.000 0.00 0.00 0.00 3.53
3210 3296 2.571212 TCTCATCTCTCTCGCTCTTCC 58.429 52.381 0.00 0.00 0.00 3.46
3211 3297 4.067896 AGATCTCATCTCTCTCGCTCTTC 58.932 47.826 0.00 0.00 33.42 2.87
3212 3298 3.817084 CAGATCTCATCTCTCTCGCTCTT 59.183 47.826 0.00 0.00 37.58 2.85
3213 3299 3.405831 CAGATCTCATCTCTCTCGCTCT 58.594 50.000 0.00 0.00 37.58 4.09
3214 3300 2.485426 CCAGATCTCATCTCTCTCGCTC 59.515 54.545 0.00 0.00 37.58 5.03
3215 3301 2.106338 TCCAGATCTCATCTCTCTCGCT 59.894 50.000 0.00 0.00 37.58 4.93
3216 3302 2.503331 TCCAGATCTCATCTCTCTCGC 58.497 52.381 0.00 0.00 37.58 5.03
3217 3303 4.761227 TCAATCCAGATCTCATCTCTCTCG 59.239 45.833 0.00 0.00 37.58 4.04
3218 3304 6.845758 ATCAATCCAGATCTCATCTCTCTC 57.154 41.667 0.00 0.00 37.58 3.20
3219 3305 6.783482 TCAATCAATCCAGATCTCATCTCTCT 59.217 38.462 0.00 0.00 37.58 3.10
3220 3306 6.869913 GTCAATCAATCCAGATCTCATCTCTC 59.130 42.308 0.00 0.00 37.58 3.20
3221 3307 6.555738 AGTCAATCAATCCAGATCTCATCTCT 59.444 38.462 0.00 0.00 37.58 3.10
3222 3308 6.647481 CAGTCAATCAATCCAGATCTCATCTC 59.353 42.308 0.00 0.00 37.58 2.75
3223 3309 6.099990 ACAGTCAATCAATCCAGATCTCATCT 59.900 38.462 0.00 0.00 41.15 2.90
3224 3310 6.289834 ACAGTCAATCAATCCAGATCTCATC 58.710 40.000 0.00 0.00 0.00 2.92
3225 3311 6.249911 ACAGTCAATCAATCCAGATCTCAT 57.750 37.500 0.00 0.00 0.00 2.90
3226 3312 5.668471 GACAGTCAATCAATCCAGATCTCA 58.332 41.667 0.00 0.00 0.00 3.27
3227 3313 4.744137 CGACAGTCAATCAATCCAGATCTC 59.256 45.833 0.41 0.00 0.00 2.75
3228 3314 4.403752 TCGACAGTCAATCAATCCAGATCT 59.596 41.667 0.41 0.00 0.00 2.75
3229 3315 4.686972 TCGACAGTCAATCAATCCAGATC 58.313 43.478 0.41 0.00 0.00 2.75
3230 3316 4.743057 TCGACAGTCAATCAATCCAGAT 57.257 40.909 0.41 0.00 0.00 2.90
3231 3317 4.686972 GATCGACAGTCAATCAATCCAGA 58.313 43.478 0.41 0.00 0.00 3.86
3232 3318 3.488678 CGATCGACAGTCAATCAATCCAG 59.511 47.826 10.26 0.00 0.00 3.86
3233 3319 3.130340 TCGATCGACAGTCAATCAATCCA 59.870 43.478 15.15 0.00 0.00 3.41
3234 3320 3.706698 TCGATCGACAGTCAATCAATCC 58.293 45.455 15.15 0.00 0.00 3.01
3235 3321 5.493397 GATCGATCGACAGTCAATCAATC 57.507 43.478 22.06 5.55 0.00 2.67
3250 3336 1.441849 CTCGCTGGCTCGATCGATC 60.442 63.158 19.78 14.83 37.87 3.69
3251 3337 1.851021 CTCTCGCTGGCTCGATCGAT 61.851 60.000 19.78 0.00 37.87 3.59
3252 3338 2.513897 TCTCGCTGGCTCGATCGA 60.514 61.111 18.32 18.32 37.87 3.59
3253 3339 1.499688 TACTCTCGCTGGCTCGATCG 61.500 60.000 9.36 9.36 37.87 3.69
3254 3340 0.663688 TTACTCTCGCTGGCTCGATC 59.336 55.000 3.22 0.00 37.87 3.69
3255 3341 1.103803 TTTACTCTCGCTGGCTCGAT 58.896 50.000 3.22 0.00 37.87 3.59
3256 3342 1.103803 ATTTACTCTCGCTGGCTCGA 58.896 50.000 2.84 2.84 36.94 4.04
3257 3343 2.656085 CTATTTACTCTCGCTGGCTCG 58.344 52.381 0.00 0.00 0.00 5.03
3258 3344 2.223829 TGCTATTTACTCTCGCTGGCTC 60.224 50.000 0.00 0.00 0.00 4.70
3259 3345 1.757118 TGCTATTTACTCTCGCTGGCT 59.243 47.619 0.00 0.00 0.00 4.75
3260 3346 2.225068 TGCTATTTACTCTCGCTGGC 57.775 50.000 0.00 0.00 0.00 4.85
3261 3347 6.480320 AGTTTTATGCTATTTACTCTCGCTGG 59.520 38.462 0.00 0.00 0.00 4.85
3262 3348 7.470289 AGTTTTATGCTATTTACTCTCGCTG 57.530 36.000 0.00 0.00 0.00 5.18
3263 3349 8.414778 AGTAGTTTTATGCTATTTACTCTCGCT 58.585 33.333 0.00 0.00 0.00 4.93
3264 3350 8.576936 AGTAGTTTTATGCTATTTACTCTCGC 57.423 34.615 0.00 0.00 0.00 5.03
3280 3366 9.379770 ACCCTAACCTGTAAAGTAGTAGTTTTA 57.620 33.333 8.25 0.00 0.00 1.52
3281 3367 8.267620 ACCCTAACCTGTAAAGTAGTAGTTTT 57.732 34.615 8.25 0.00 0.00 2.43
3282 3368 7.862274 ACCCTAACCTGTAAAGTAGTAGTTT 57.138 36.000 8.04 8.04 0.00 2.66
3283 3369 7.038729 GGAACCCTAACCTGTAAAGTAGTAGTT 60.039 40.741 0.00 0.00 0.00 2.24
3284 3370 6.438741 GGAACCCTAACCTGTAAAGTAGTAGT 59.561 42.308 0.00 0.00 0.00 2.73
3285 3371 6.438425 TGGAACCCTAACCTGTAAAGTAGTAG 59.562 42.308 0.00 0.00 0.00 2.57
3286 3372 6.322126 TGGAACCCTAACCTGTAAAGTAGTA 58.678 40.000 0.00 0.00 0.00 1.82
3287 3373 5.157395 TGGAACCCTAACCTGTAAAGTAGT 58.843 41.667 0.00 0.00 0.00 2.73
3288 3374 5.750352 TGGAACCCTAACCTGTAAAGTAG 57.250 43.478 0.00 0.00 0.00 2.57
3289 3375 6.512514 TTTGGAACCCTAACCTGTAAAGTA 57.487 37.500 0.00 0.00 0.00 2.24
3290 3376 5.391577 TTTGGAACCCTAACCTGTAAAGT 57.608 39.130 0.00 0.00 0.00 2.66
3291 3377 6.718522 TTTTTGGAACCCTAACCTGTAAAG 57.281 37.500 0.00 0.00 0.00 1.85
3330 3416 7.361713 CCTGATTTGGTAGTTATCAGCGAAAAA 60.362 37.037 0.00 0.00 42.39 1.94
3331 3417 6.093495 CCTGATTTGGTAGTTATCAGCGAAAA 59.907 38.462 0.00 0.00 42.39 2.29
3332 3418 5.584649 CCTGATTTGGTAGTTATCAGCGAAA 59.415 40.000 0.00 0.00 42.39 3.46
3333 3419 5.116180 CCTGATTTGGTAGTTATCAGCGAA 58.884 41.667 0.00 0.00 42.39 4.70
3334 3420 4.442893 CCCTGATTTGGTAGTTATCAGCGA 60.443 45.833 0.00 0.00 42.39 4.93
3335 3421 3.809832 CCCTGATTTGGTAGTTATCAGCG 59.190 47.826 0.00 0.00 42.39 5.18
3336 3422 4.137543 CCCCTGATTTGGTAGTTATCAGC 58.862 47.826 0.00 0.00 42.39 4.26
3337 3423 5.373812 ACCCCTGATTTGGTAGTTATCAG 57.626 43.478 0.00 0.00 43.03 2.90
3338 3424 5.505780 CAACCCCTGATTTGGTAGTTATCA 58.494 41.667 0.00 0.00 33.52 2.15
3339 3425 4.887655 CCAACCCCTGATTTGGTAGTTATC 59.112 45.833 0.00 0.00 37.98 1.75
3340 3426 4.867086 CCAACCCCTGATTTGGTAGTTAT 58.133 43.478 0.00 0.00 37.98 1.89
3341 3427 3.562609 GCCAACCCCTGATTTGGTAGTTA 60.563 47.826 2.50 0.00 43.74 2.24
3342 3428 2.821625 GCCAACCCCTGATTTGGTAGTT 60.822 50.000 2.50 0.00 43.74 2.24
3343 3429 1.272480 GCCAACCCCTGATTTGGTAGT 60.272 52.381 2.50 0.00 43.74 2.73
3344 3430 1.005924 AGCCAACCCCTGATTTGGTAG 59.994 52.381 2.50 0.00 43.74 3.18
3345 3431 1.080638 AGCCAACCCCTGATTTGGTA 58.919 50.000 2.50 0.00 43.74 3.25
3346 3432 0.542702 CAGCCAACCCCTGATTTGGT 60.543 55.000 2.50 0.00 43.74 3.67
3347 3433 0.542702 ACAGCCAACCCCTGATTTGG 60.543 55.000 0.00 0.00 44.54 3.28
3348 3434 1.341080 AACAGCCAACCCCTGATTTG 58.659 50.000 0.00 0.00 34.47 2.32
3349 3435 1.970640 GAAACAGCCAACCCCTGATTT 59.029 47.619 0.00 0.00 34.47 2.17
3350 3436 1.133199 TGAAACAGCCAACCCCTGATT 60.133 47.619 0.00 0.00 34.47 2.57
3351 3437 0.482446 TGAAACAGCCAACCCCTGAT 59.518 50.000 0.00 0.00 34.47 2.90
3352 3438 0.260230 TTGAAACAGCCAACCCCTGA 59.740 50.000 0.00 0.00 34.47 3.86
3353 3439 1.118838 TTTGAAACAGCCAACCCCTG 58.881 50.000 0.00 0.00 36.41 4.45
3354 3440 1.872773 TTTTGAAACAGCCAACCCCT 58.127 45.000 0.00 0.00 0.00 4.79
3355 3441 2.700722 TTTTTGAAACAGCCAACCCC 57.299 45.000 0.00 0.00 0.00 4.95
3371 3457 3.719871 ACAAAGAGGAGTTGGGGTTTTT 58.280 40.909 0.00 0.00 0.00 1.94
3372 3458 3.398318 ACAAAGAGGAGTTGGGGTTTT 57.602 42.857 0.00 0.00 0.00 2.43
3373 3459 3.398318 AACAAAGAGGAGTTGGGGTTT 57.602 42.857 0.00 0.00 0.00 3.27
3374 3460 4.529716 TTAACAAAGAGGAGTTGGGGTT 57.470 40.909 0.00 0.00 0.00 4.11
3375 3461 4.529716 TTTAACAAAGAGGAGTTGGGGT 57.470 40.909 0.00 0.00 0.00 4.95
3376 3462 5.862678 TTTTTAACAAAGAGGAGTTGGGG 57.137 39.130 0.00 0.00 0.00 4.96
3397 3483 9.487790 CCAACCTGTCATAAACATGTTTAATTT 57.512 29.630 29.44 14.54 42.03 1.82
3398 3484 8.093927 CCCAACCTGTCATAAACATGTTTAATT 58.906 33.333 29.44 15.20 42.03 1.40
3399 3485 7.610865 CCCAACCTGTCATAAACATGTTTAAT 58.389 34.615 29.44 17.44 42.03 1.40
3400 3486 6.517529 GCCCAACCTGTCATAAACATGTTTAA 60.518 38.462 29.44 15.20 42.03 1.52
3401 3487 5.047660 GCCCAACCTGTCATAAACATGTTTA 60.048 40.000 28.30 28.30 42.03 2.01
3402 3488 4.262420 GCCCAACCTGTCATAAACATGTTT 60.262 41.667 25.99 25.99 42.03 2.83
3403 3489 3.258123 GCCCAACCTGTCATAAACATGTT 59.742 43.478 4.92 4.92 44.49 2.71
3404 3490 2.825532 GCCCAACCTGTCATAAACATGT 59.174 45.455 0.00 0.00 38.23 3.21
3405 3491 2.166254 GGCCCAACCTGTCATAAACATG 59.834 50.000 0.00 0.00 37.23 3.21
3406 3492 2.456577 GGCCCAACCTGTCATAAACAT 58.543 47.619 0.00 0.00 37.23 2.71
3407 3493 1.884497 CGGCCCAACCTGTCATAAACA 60.884 52.381 0.00 0.00 35.61 2.83
3408 3494 0.808755 CGGCCCAACCTGTCATAAAC 59.191 55.000 0.00 0.00 35.61 2.01
3409 3495 0.963355 GCGGCCCAACCTGTCATAAA 60.963 55.000 0.00 0.00 35.61 1.40
3410 3496 1.377987 GCGGCCCAACCTGTCATAA 60.378 57.895 0.00 0.00 35.61 1.90
3411 3497 2.270850 GCGGCCCAACCTGTCATA 59.729 61.111 0.00 0.00 35.61 2.15
3412 3498 4.740822 GGCGGCCCAACCTGTCAT 62.741 66.667 8.12 0.00 35.61 3.06
3420 3506 4.572571 AAACGAGTGGCGGCCCAA 62.573 61.111 17.97 0.00 44.33 4.12


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.