Multiple sequence alignment - TraesCS2B01G016000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G016000 chr2B 100.000 4955 0 0 1 4955 7649751 7644797 0.000000e+00 9151.0
1 TraesCS2B01G016000 chr2B 87.643 526 57 3 3024 3542 7581703 7581179 5.490000e-169 604.0
2 TraesCS2B01G016000 chr2B 82.090 469 64 13 4492 4955 8250035 8250488 2.800000e-102 383.0
3 TraesCS2B01G016000 chr2B 81.585 467 70 11 4492 4955 7814192 7814645 6.060000e-99 372.0
4 TraesCS2B01G016000 chr2B 79.433 423 68 15 1325 1743 7587957 7587550 1.050000e-71 281.0
5 TraesCS2B01G016000 chr2B 90.099 101 9 1 4310 4410 201234355 201234256 4.030000e-26 130.0
6 TraesCS2B01G016000 chr2A 89.865 1628 98 26 766 2385 2661194 2659626 0.000000e+00 2030.0
7 TraesCS2B01G016000 chr2A 91.387 1161 90 8 2962 4118 2659134 2657980 0.000000e+00 1581.0
8 TraesCS2B01G016000 chr2A 88.172 558 42 12 2426 2966 2659617 2659067 1.160000e-180 643.0
9 TraesCS2B01G016000 chr2A 79.083 545 101 12 4418 4955 2657595 2657057 3.650000e-96 363.0
10 TraesCS2B01G016000 chr2A 90.756 119 7 4 4117 4234 2657944 2657829 6.640000e-34 156.0
11 TraesCS2B01G016000 chr2A 87.970 133 14 2 324 455 684440508 684440377 6.640000e-34 156.0
12 TraesCS2B01G016000 chr2D 88.834 1630 109 33 778 2385 3076970 3078548 0.000000e+00 1934.0
13 TraesCS2B01G016000 chr2D 89.454 1318 117 19 3017 4318 3079109 3080420 0.000000e+00 1644.0
14 TraesCS2B01G016000 chr2D 94.075 557 29 4 4400 4955 3080419 3080972 0.000000e+00 843.0
15 TraesCS2B01G016000 chr2D 91.864 590 46 2 3393 3982 3032517 3033104 0.000000e+00 822.0
16 TraesCS2B01G016000 chr2D 84.100 522 43 17 2426 2917 3078557 3079068 7.510000e-128 468.0
17 TraesCS2B01G016000 chr2D 90.288 278 23 2 4014 4291 3033106 3033379 1.310000e-95 361.0
18 TraesCS2B01G016000 chr2D 85.014 347 32 8 3810 4151 3629099 3629430 7.950000e-88 335.0
19 TraesCS2B01G016000 chr2D 77.426 505 99 8 4457 4955 21917087 21917582 2.260000e-73 287.0
20 TraesCS2B01G016000 chr2D 88.060 134 16 0 324 457 587695389 587695256 5.130000e-35 159.0
21 TraesCS2B01G016000 chr2D 91.000 100 9 0 1909 2008 3032424 3032523 8.650000e-28 135.0
22 TraesCS2B01G016000 chr3B 82.549 510 75 12 4457 4955 796835280 796835786 2.120000e-118 436.0
23 TraesCS2B01G016000 chr3B 96.667 90 2 1 620 708 738120245 738120334 1.110000e-31 148.0
24 TraesCS2B01G016000 chr3B 96.471 85 3 0 4317 4401 142864138 142864054 1.860000e-29 141.0
25 TraesCS2B01G016000 chr3B 95.455 88 4 0 4314 4401 748777088 748777175 1.860000e-29 141.0
26 TraesCS2B01G016000 chr5B 74.745 491 111 10 4465 4950 537960132 537960614 1.810000e-49 207.0
27 TraesCS2B01G016000 chr5B 94.382 89 4 1 619 706 13355164 13355076 8.650000e-28 135.0
28 TraesCS2B01G016000 chr6B 78.641 309 51 8 324 619 644808363 644808669 1.820000e-44 191.0
29 TraesCS2B01G016000 chr6B 83.486 109 17 1 465 572 93420892 93421000 3.160000e-17 100.0
30 TraesCS2B01G016000 chr4D 89.394 132 13 1 324 455 7941547 7941417 1.100000e-36 165.0
31 TraesCS2B01G016000 chr4D 85.714 70 8 2 680 747 58159078 58159147 6.880000e-09 73.1
32 TraesCS2B01G016000 chr4D 96.970 33 1 0 592 624 362129096 362129064 6.930000e-04 56.5
33 TraesCS2B01G016000 chr6D 88.636 132 15 0 324 455 9974548 9974417 1.430000e-35 161.0
34 TraesCS2B01G016000 chr4A 86.667 150 15 4 1529 1674 732845540 732845392 1.430000e-35 161.0
35 TraesCS2B01G016000 chr4A 87.407 135 17 0 323 457 637936771 637936905 6.640000e-34 156.0
36 TraesCS2B01G016000 chr4A 80.556 108 17 3 519 626 103070097 103070200 4.110000e-11 80.5
37 TraesCS2B01G016000 chr5D 87.407 135 14 2 324 457 424316612 424316744 8.590000e-33 152.0
38 TraesCS2B01G016000 chr5D 95.455 88 3 1 621 707 229934130 229934217 6.690000e-29 139.0
39 TraesCS2B01G016000 chr5D 94.505 91 4 1 617 706 542716755 542716665 6.690000e-29 139.0
40 TraesCS2B01G016000 chr5D 92.473 93 6 1 617 708 445642890 445642798 1.120000e-26 132.0
41 TraesCS2B01G016000 chr3D 87.313 134 16 1 323 456 56307410 56307542 8.590000e-33 152.0
42 TraesCS2B01G016000 chr3D 95.402 87 3 1 620 705 39333777 39333691 2.410000e-28 137.0
43 TraesCS2B01G016000 chr3D 96.970 33 1 0 592 624 581351052 581351084 6.930000e-04 56.5
44 TraesCS2B01G016000 chr1B 87.218 133 15 2 324 456 26260780 26260910 3.090000e-32 150.0
45 TraesCS2B01G016000 chr1B 94.624 93 4 1 4311 4402 39580052 39580144 5.170000e-30 143.0
46 TraesCS2B01G016000 chr1B 95.455 88 4 0 4314 4401 28500417 28500504 1.860000e-29 141.0
47 TraesCS2B01G016000 chr7B 87.023 131 17 0 327 457 641362990 641362860 1.110000e-31 148.0
48 TraesCS2B01G016000 chr4B 94.565 92 5 0 4310 4401 413719566 413719657 5.170000e-30 143.0
49 TraesCS2B01G016000 chr4B 95.455 88 3 1 621 707 644289474 644289387 6.690000e-29 139.0
50 TraesCS2B01G016000 chr7D 93.548 93 6 0 4309 4401 345777431 345777523 6.690000e-29 139.0
51 TraesCS2B01G016000 chr7D 92.553 94 7 0 4309 4402 511659530 511659437 8.650000e-28 135.0
52 TraesCS2B01G016000 chr7D 91.753 97 5 3 621 716 514348275 514348181 1.120000e-26 132.0
53 TraesCS2B01G016000 chr7A 95.455 88 3 1 621 707 12748988 12749075 6.690000e-29 139.0
54 TraesCS2B01G016000 chr1A 94.444 90 5 0 4315 4404 90811149 90811238 6.690000e-29 139.0
55 TraesCS2B01G016000 chr1A 93.407 91 4 2 620 709 105304764 105304675 3.110000e-27 134.0
56 TraesCS2B01G016000 chr5A 94.444 90 4 1 618 706 696989148 696989237 2.410000e-28 137.0
57 TraesCS2B01G016000 chr3A 94.444 90 4 1 618 706 549639104 549639193 2.410000e-28 137.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G016000 chr2B 7644797 7649751 4954 True 9151.000000 9151 100.000000 1 4955 1 chr2B.!!$R3 4954
1 TraesCS2B01G016000 chr2B 7581179 7581703 524 True 604.000000 604 87.643000 3024 3542 1 chr2B.!!$R1 518
2 TraesCS2B01G016000 chr2A 2657057 2661194 4137 True 954.600000 2030 87.852600 766 4955 5 chr2A.!!$R2 4189
3 TraesCS2B01G016000 chr2D 3076970 3080972 4002 False 1222.250000 1934 89.115750 778 4955 4 chr2D.!!$F4 4177
4 TraesCS2B01G016000 chr2D 3032424 3033379 955 False 439.333333 822 91.050667 1909 4291 3 chr2D.!!$F3 2382
5 TraesCS2B01G016000 chr3B 796835280 796835786 506 False 436.000000 436 82.549000 4457 4955 1 chr3B.!!$F3 498

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
438 439 0.107643 TGTGGCGAGATTTGGTGTCA 59.892 50.0 0.0 0.0 0.00 3.58 F
976 999 0.179000 CACCACTAGTCCTGGCATCC 59.821 60.0 0.0 0.0 31.13 3.51 F
2593 2651 0.104304 ATACCGTTGGAGCCTTAGCG 59.896 55.0 0.0 0.0 46.67 4.26 F
3276 3366 0.322816 TGCTGGGAAAGATGGCTCAC 60.323 55.0 0.0 0.0 0.00 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1857 1892 0.108662 GAAAATTGCCGCCCTCCTTG 60.109 55.000 0.00 0.00 0.00 3.61 R
2780 2843 0.038343 GCAACGTTGGAATGGCATGT 60.038 50.000 28.33 0.00 0.00 3.21 R
3891 3993 1.154225 CAAAAGTGCGGCACCGATC 60.154 57.895 28.14 4.35 42.83 3.69 R
4824 5140 0.107410 TTCACCTTGTCACTTGCGGT 60.107 50.000 0.00 0.00 0.00 5.68 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
116 117 7.958053 TTAAGTACTTTAGACCAGTCAAAGC 57.042 36.000 14.49 7.09 34.31 3.51
117 118 5.546621 AGTACTTTAGACCAGTCAAAGCA 57.453 39.130 16.07 6.91 34.31 3.91
118 119 5.542779 AGTACTTTAGACCAGTCAAAGCAG 58.457 41.667 16.07 3.33 34.31 4.24
119 120 4.423625 ACTTTAGACCAGTCAAAGCAGT 57.576 40.909 16.07 3.79 34.31 4.40
120 121 5.546621 ACTTTAGACCAGTCAAAGCAGTA 57.453 39.130 16.07 0.00 34.31 2.74
121 122 5.925509 ACTTTAGACCAGTCAAAGCAGTAA 58.074 37.500 16.07 0.00 34.31 2.24
122 123 6.534634 ACTTTAGACCAGTCAAAGCAGTAAT 58.465 36.000 16.07 1.91 34.31 1.89
123 124 7.676947 ACTTTAGACCAGTCAAAGCAGTAATA 58.323 34.615 16.07 0.00 34.31 0.98
124 125 8.322091 ACTTTAGACCAGTCAAAGCAGTAATAT 58.678 33.333 16.07 0.98 34.31 1.28
125 126 9.167311 CTTTAGACCAGTCAAAGCAGTAATATT 57.833 33.333 0.00 0.00 0.00 1.28
126 127 9.515226 TTTAGACCAGTCAAAGCAGTAATATTT 57.485 29.630 0.00 0.00 0.00 1.40
127 128 7.383102 AGACCAGTCAAAGCAGTAATATTTG 57.617 36.000 0.00 0.00 35.68 2.32
128 129 6.375455 AGACCAGTCAAAGCAGTAATATTTGG 59.625 38.462 0.00 0.00 35.21 3.28
129 130 6.010219 ACCAGTCAAAGCAGTAATATTTGGT 58.990 36.000 0.00 0.00 35.21 3.67
130 131 6.151144 ACCAGTCAAAGCAGTAATATTTGGTC 59.849 38.462 0.00 0.00 35.21 4.02
131 132 6.375455 CCAGTCAAAGCAGTAATATTTGGTCT 59.625 38.462 0.00 0.00 35.21 3.85
132 133 7.552687 CCAGTCAAAGCAGTAATATTTGGTCTA 59.447 37.037 0.00 0.00 35.21 2.59
133 134 9.113838 CAGTCAAAGCAGTAATATTTGGTCTAT 57.886 33.333 0.00 0.00 35.21 1.98
134 135 9.113838 AGTCAAAGCAGTAATATTTGGTCTATG 57.886 33.333 0.00 0.00 35.21 2.23
135 136 8.893727 GTCAAAGCAGTAATATTTGGTCTATGT 58.106 33.333 0.00 0.00 35.21 2.29
136 137 9.109393 TCAAAGCAGTAATATTTGGTCTATGTC 57.891 33.333 0.00 0.00 35.21 3.06
137 138 8.345565 CAAAGCAGTAATATTTGGTCTATGTCC 58.654 37.037 0.00 0.00 31.73 4.02
138 139 7.380423 AGCAGTAATATTTGGTCTATGTCCT 57.620 36.000 0.00 0.00 0.00 3.85
139 140 8.492415 AGCAGTAATATTTGGTCTATGTCCTA 57.508 34.615 0.00 0.00 0.00 2.94
140 141 8.368668 AGCAGTAATATTTGGTCTATGTCCTAC 58.631 37.037 0.00 0.00 0.00 3.18
141 142 8.148351 GCAGTAATATTTGGTCTATGTCCTACA 58.852 37.037 0.00 0.00 0.00 2.74
147 148 6.569179 TTTGGTCTATGTCCTACAAAAAGC 57.431 37.500 0.00 0.00 0.00 3.51
148 149 4.250464 TGGTCTATGTCCTACAAAAAGCG 58.750 43.478 0.00 0.00 0.00 4.68
149 150 3.621715 GGTCTATGTCCTACAAAAAGCGG 59.378 47.826 0.00 0.00 0.00 5.52
150 151 3.063588 GTCTATGTCCTACAAAAAGCGGC 59.936 47.826 0.00 0.00 0.00 6.53
151 152 2.200373 ATGTCCTACAAAAAGCGGCT 57.800 45.000 0.00 0.00 0.00 5.52
152 153 1.975660 TGTCCTACAAAAAGCGGCTT 58.024 45.000 9.94 9.94 0.00 4.35
153 154 1.877443 TGTCCTACAAAAAGCGGCTTC 59.123 47.619 16.70 0.44 0.00 3.86
154 155 1.877443 GTCCTACAAAAAGCGGCTTCA 59.123 47.619 16.70 0.00 0.00 3.02
155 156 1.877443 TCCTACAAAAAGCGGCTTCAC 59.123 47.619 16.70 0.00 0.00 3.18
156 157 1.606668 CCTACAAAAAGCGGCTTCACA 59.393 47.619 16.70 0.00 0.00 3.58
157 158 2.604614 CCTACAAAAAGCGGCTTCACAC 60.605 50.000 16.70 0.00 0.00 3.82
158 159 0.814457 ACAAAAAGCGGCTTCACACA 59.186 45.000 16.70 0.00 0.00 3.72
159 160 1.408702 ACAAAAAGCGGCTTCACACAT 59.591 42.857 16.70 0.00 0.00 3.21
160 161 1.788308 CAAAAAGCGGCTTCACACATG 59.212 47.619 16.70 5.50 0.00 3.21
161 162 1.032014 AAAAGCGGCTTCACACATGT 58.968 45.000 16.70 0.00 0.00 3.21
162 163 0.311790 AAAGCGGCTTCACACATGTG 59.688 50.000 24.25 24.25 46.91 3.21
163 164 1.518056 AAGCGGCTTCACACATGTGG 61.518 55.000 28.64 17.57 45.65 4.17
164 165 2.562912 CGGCTTCACACATGTGGC 59.437 61.111 28.64 20.99 45.65 5.01
165 166 2.260154 CGGCTTCACACATGTGGCA 61.260 57.895 28.64 12.52 45.65 4.92
166 167 1.588824 CGGCTTCACACATGTGGCAT 61.589 55.000 28.64 6.19 45.65 4.40
167 168 1.462616 GGCTTCACACATGTGGCATA 58.537 50.000 28.64 10.75 45.65 3.14
168 169 1.133025 GGCTTCACACATGTGGCATAC 59.867 52.381 28.64 14.91 45.65 2.39
169 170 1.133025 GCTTCACACATGTGGCATACC 59.867 52.381 28.64 9.44 45.65 2.73
170 171 2.435422 CTTCACACATGTGGCATACCA 58.565 47.619 28.64 5.53 45.65 3.25
180 181 1.890876 TGGCATACCAGTGAACACAC 58.109 50.000 7.68 0.00 42.67 3.82
181 182 1.141858 TGGCATACCAGTGAACACACA 59.858 47.619 7.68 0.00 42.67 3.72
182 183 2.226330 GGCATACCAGTGAACACACAA 58.774 47.619 7.68 0.00 37.04 3.33
183 184 2.621055 GGCATACCAGTGAACACACAAA 59.379 45.455 7.68 0.00 37.04 2.83
184 185 3.067461 GGCATACCAGTGAACACACAAAA 59.933 43.478 7.68 0.00 37.04 2.44
185 186 4.440802 GGCATACCAGTGAACACACAAAAA 60.441 41.667 7.68 0.00 37.04 1.94
186 187 5.288804 GCATACCAGTGAACACACAAAAAT 58.711 37.500 7.68 0.00 37.04 1.82
187 188 5.402270 GCATACCAGTGAACACACAAAAATC 59.598 40.000 7.68 0.00 37.04 2.17
188 189 6.735694 GCATACCAGTGAACACACAAAAATCT 60.736 38.462 7.68 0.00 37.04 2.40
189 190 7.521423 GCATACCAGTGAACACACAAAAATCTA 60.521 37.037 7.68 0.00 37.04 1.98
190 191 6.767524 ACCAGTGAACACACAAAAATCTAA 57.232 33.333 7.68 0.00 37.04 2.10
191 192 7.164230 ACCAGTGAACACACAAAAATCTAAA 57.836 32.000 7.68 0.00 37.04 1.85
192 193 7.607250 ACCAGTGAACACACAAAAATCTAAAA 58.393 30.769 7.68 0.00 37.04 1.52
193 194 8.091449 ACCAGTGAACACACAAAAATCTAAAAA 58.909 29.630 7.68 0.00 37.04 1.94
241 242 9.987272 AGGAAAAGCATGAAAATATATTTAGGC 57.013 29.630 11.07 9.77 0.00 3.93
242 243 9.762933 GGAAAAGCATGAAAATATATTTAGGCA 57.237 29.630 15.99 12.67 0.00 4.75
338 339 7.766219 TTATTTTTAATCCTCCTCGAGTTCG 57.234 36.000 12.31 0.00 41.45 3.95
339 340 4.796038 TTTTAATCCTCCTCGAGTTCGT 57.204 40.909 12.31 0.00 40.80 3.85
340 341 4.796038 TTTAATCCTCCTCGAGTTCGTT 57.204 40.909 12.31 2.45 40.80 3.85
341 342 2.943449 AATCCTCCTCGAGTTCGTTC 57.057 50.000 12.31 0.00 40.80 3.95
342 343 0.733729 ATCCTCCTCGAGTTCGTTCG 59.266 55.000 12.31 0.00 41.79 3.95
343 344 0.604780 TCCTCCTCGAGTTCGTTCGT 60.605 55.000 12.31 0.00 41.22 3.85
344 345 0.179194 CCTCCTCGAGTTCGTTCGTC 60.179 60.000 12.31 0.00 41.22 4.20
345 346 0.797542 CTCCTCGAGTTCGTTCGTCT 59.202 55.000 12.31 0.00 41.22 4.18
346 347 0.516001 TCCTCGAGTTCGTTCGTCTG 59.484 55.000 12.31 0.00 41.22 3.51
347 348 0.454620 CCTCGAGTTCGTTCGTCTGG 60.455 60.000 12.31 0.00 41.22 3.86
348 349 0.516001 CTCGAGTTCGTTCGTCTGGA 59.484 55.000 3.62 0.01 41.22 3.86
349 350 0.236711 TCGAGTTCGTTCGTCTGGAC 59.763 55.000 1.07 0.00 41.22 4.02
350 351 1.058590 CGAGTTCGTTCGTCTGGACG 61.059 60.000 15.83 15.83 44.20 4.79
351 352 3.625079 CGAGTTCGTTCGTCTGGACGT 62.625 57.143 20.11 0.00 43.72 4.34
352 353 4.294492 CGAGTTCGTTCGTCTGGACGTA 62.294 54.545 20.11 10.22 43.72 3.57
378 379 2.734276 GGAGCTCCGACATAGATTCC 57.266 55.000 19.06 0.00 0.00 3.01
379 380 1.273886 GGAGCTCCGACATAGATTCCC 59.726 57.143 19.06 0.00 0.00 3.97
380 381 0.962489 AGCTCCGACATAGATTCCCG 59.038 55.000 0.00 0.00 0.00 5.14
381 382 0.674534 GCTCCGACATAGATTCCCGT 59.325 55.000 0.00 0.00 0.00 5.28
382 383 1.068741 GCTCCGACATAGATTCCCGTT 59.931 52.381 0.00 0.00 0.00 4.44
383 384 2.743938 CTCCGACATAGATTCCCGTTG 58.256 52.381 0.00 0.00 0.00 4.10
384 385 2.100916 CTCCGACATAGATTCCCGTTGT 59.899 50.000 0.00 0.00 0.00 3.32
385 386 2.100252 TCCGACATAGATTCCCGTTGTC 59.900 50.000 0.00 0.00 34.70 3.18
386 387 2.100916 CCGACATAGATTCCCGTTGTCT 59.899 50.000 0.00 0.00 35.64 3.41
387 388 3.372954 CGACATAGATTCCCGTTGTCTC 58.627 50.000 0.00 0.00 35.64 3.36
388 389 3.066900 CGACATAGATTCCCGTTGTCTCT 59.933 47.826 0.00 0.00 35.64 3.10
389 390 4.440250 CGACATAGATTCCCGTTGTCTCTT 60.440 45.833 0.00 0.00 35.64 2.85
390 391 5.420409 GACATAGATTCCCGTTGTCTCTTT 58.580 41.667 0.00 0.00 35.09 2.52
391 392 6.540438 ACATAGATTCCCGTTGTCTCTTTA 57.460 37.500 0.00 0.00 0.00 1.85
392 393 6.574350 ACATAGATTCCCGTTGTCTCTTTAG 58.426 40.000 0.00 0.00 0.00 1.85
393 394 6.380274 ACATAGATTCCCGTTGTCTCTTTAGA 59.620 38.462 0.00 0.00 0.00 2.10
394 395 5.331876 AGATTCCCGTTGTCTCTTTAGAG 57.668 43.478 0.15 0.15 43.36 2.43
395 396 4.773149 AGATTCCCGTTGTCTCTTTAGAGT 59.227 41.667 6.65 0.00 42.60 3.24
396 397 3.936372 TCCCGTTGTCTCTTTAGAGTG 57.064 47.619 6.65 0.00 42.60 3.51
397 398 2.561419 TCCCGTTGTCTCTTTAGAGTGG 59.439 50.000 6.65 3.27 42.60 4.00
398 399 2.299297 CCCGTTGTCTCTTTAGAGTGGT 59.701 50.000 6.65 0.00 42.60 4.16
399 400 3.318017 CCGTTGTCTCTTTAGAGTGGTG 58.682 50.000 6.65 0.00 42.60 4.17
400 401 3.005472 CCGTTGTCTCTTTAGAGTGGTGA 59.995 47.826 6.65 0.00 42.60 4.02
401 402 4.230657 CGTTGTCTCTTTAGAGTGGTGAG 58.769 47.826 6.65 0.00 42.60 3.51
402 403 4.561105 GTTGTCTCTTTAGAGTGGTGAGG 58.439 47.826 6.65 0.00 42.60 3.86
403 404 3.845860 TGTCTCTTTAGAGTGGTGAGGT 58.154 45.455 6.65 0.00 42.60 3.85
404 405 4.223953 TGTCTCTTTAGAGTGGTGAGGTT 58.776 43.478 6.65 0.00 42.60 3.50
405 406 5.391256 TGTCTCTTTAGAGTGGTGAGGTTA 58.609 41.667 6.65 0.00 42.60 2.85
406 407 5.243283 TGTCTCTTTAGAGTGGTGAGGTTAC 59.757 44.000 6.65 0.00 42.60 2.50
407 408 4.458295 TCTCTTTAGAGTGGTGAGGTTACG 59.542 45.833 6.65 0.00 42.60 3.18
408 409 3.508793 TCTTTAGAGTGGTGAGGTTACGG 59.491 47.826 0.00 0.00 0.00 4.02
409 410 2.592102 TAGAGTGGTGAGGTTACGGT 57.408 50.000 0.00 0.00 0.00 4.83
410 411 1.713297 AGAGTGGTGAGGTTACGGTT 58.287 50.000 0.00 0.00 0.00 4.44
411 412 2.044758 AGAGTGGTGAGGTTACGGTTT 58.955 47.619 0.00 0.00 0.00 3.27
412 413 2.036862 AGAGTGGTGAGGTTACGGTTTC 59.963 50.000 0.00 0.00 0.00 2.78
413 414 2.036862 GAGTGGTGAGGTTACGGTTTCT 59.963 50.000 0.00 0.00 0.00 2.52
414 415 2.036862 AGTGGTGAGGTTACGGTTTCTC 59.963 50.000 0.00 0.00 0.00 2.87
415 416 1.000060 TGGTGAGGTTACGGTTTCTCG 60.000 52.381 0.00 0.00 0.00 4.04
416 417 1.000171 GGTGAGGTTACGGTTTCTCGT 60.000 52.381 0.00 0.00 45.88 4.18
417 418 2.323059 GTGAGGTTACGGTTTCTCGTC 58.677 52.381 0.00 0.00 42.82 4.20
418 419 1.955778 TGAGGTTACGGTTTCTCGTCA 59.044 47.619 0.00 0.00 42.82 4.35
419 420 2.559668 TGAGGTTACGGTTTCTCGTCAT 59.440 45.455 0.00 0.00 42.82 3.06
420 421 2.921754 GAGGTTACGGTTTCTCGTCATG 59.078 50.000 0.00 0.00 42.82 3.07
421 422 2.298163 AGGTTACGGTTTCTCGTCATGT 59.702 45.455 0.00 0.00 42.82 3.21
422 423 2.410730 GGTTACGGTTTCTCGTCATGTG 59.589 50.000 0.00 0.00 42.82 3.21
423 424 2.357327 TACGGTTTCTCGTCATGTGG 57.643 50.000 0.00 0.00 42.82 4.17
424 425 0.949105 ACGGTTTCTCGTCATGTGGC 60.949 55.000 0.00 0.00 39.34 5.01
425 426 1.787847 GGTTTCTCGTCATGTGGCG 59.212 57.895 0.00 0.00 45.75 5.69
434 435 1.453155 GTCATGTGGCGAGATTTGGT 58.547 50.000 0.00 0.00 0.00 3.67
435 436 1.131126 GTCATGTGGCGAGATTTGGTG 59.869 52.381 0.00 0.00 0.00 4.17
436 437 1.167851 CATGTGGCGAGATTTGGTGT 58.832 50.000 0.00 0.00 0.00 4.16
437 438 1.131126 CATGTGGCGAGATTTGGTGTC 59.869 52.381 0.00 0.00 0.00 3.67
438 439 0.107643 TGTGGCGAGATTTGGTGTCA 59.892 50.000 0.00 0.00 0.00 3.58
439 440 1.234821 GTGGCGAGATTTGGTGTCAA 58.765 50.000 0.00 0.00 0.00 3.18
440 441 1.197721 GTGGCGAGATTTGGTGTCAAG 59.802 52.381 0.00 0.00 33.98 3.02
441 442 1.202758 TGGCGAGATTTGGTGTCAAGT 60.203 47.619 0.00 0.00 33.98 3.16
442 443 1.197721 GGCGAGATTTGGTGTCAAGTG 59.802 52.381 0.00 0.00 33.98 3.16
443 444 1.400242 GCGAGATTTGGTGTCAAGTGC 60.400 52.381 0.00 0.00 33.98 4.40
444 445 2.146342 CGAGATTTGGTGTCAAGTGCT 58.854 47.619 0.00 0.00 33.98 4.40
445 446 2.549754 CGAGATTTGGTGTCAAGTGCTT 59.450 45.455 0.00 0.00 33.98 3.91
446 447 3.364366 CGAGATTTGGTGTCAAGTGCTTC 60.364 47.826 0.00 0.00 33.98 3.86
447 448 3.554934 AGATTTGGTGTCAAGTGCTTCA 58.445 40.909 0.00 0.00 33.98 3.02
448 449 3.567164 AGATTTGGTGTCAAGTGCTTCAG 59.433 43.478 0.00 0.00 33.98 3.02
449 450 2.708216 TTGGTGTCAAGTGCTTCAGA 57.292 45.000 0.00 0.00 0.00 3.27
450 451 2.936919 TGGTGTCAAGTGCTTCAGAT 57.063 45.000 0.00 0.00 0.00 2.90
451 452 2.771089 TGGTGTCAAGTGCTTCAGATC 58.229 47.619 0.00 0.00 0.00 2.75
452 453 2.369860 TGGTGTCAAGTGCTTCAGATCT 59.630 45.455 0.00 0.00 0.00 2.75
453 454 3.578282 TGGTGTCAAGTGCTTCAGATCTA 59.422 43.478 0.00 0.00 0.00 1.98
454 455 4.223700 TGGTGTCAAGTGCTTCAGATCTAT 59.776 41.667 0.00 0.00 0.00 1.98
455 456 4.569966 GGTGTCAAGTGCTTCAGATCTATG 59.430 45.833 0.00 0.00 0.00 2.23
456 457 4.033817 GTGTCAAGTGCTTCAGATCTATGC 59.966 45.833 0.00 0.64 0.00 3.14
457 458 3.244814 GTCAAGTGCTTCAGATCTATGCG 59.755 47.826 0.00 0.00 0.00 4.73
458 459 3.118992 TCAAGTGCTTCAGATCTATGCGT 60.119 43.478 0.00 0.00 0.00 5.24
459 460 3.533606 AGTGCTTCAGATCTATGCGTT 57.466 42.857 0.00 0.00 0.00 4.84
460 461 3.193263 AGTGCTTCAGATCTATGCGTTG 58.807 45.455 0.00 0.00 0.00 4.10
461 462 1.935873 TGCTTCAGATCTATGCGTTGC 59.064 47.619 0.00 0.00 0.00 4.17
462 463 1.935873 GCTTCAGATCTATGCGTTGCA 59.064 47.619 0.00 0.00 44.86 4.08
473 474 2.866510 CGTTGCATGTGCGCGAAG 60.867 61.111 12.10 0.00 45.83 3.79
474 475 2.555782 GTTGCATGTGCGCGAAGA 59.444 55.556 12.10 0.00 45.83 2.87
475 476 1.793613 GTTGCATGTGCGCGAAGAC 60.794 57.895 12.10 2.86 45.83 3.01
476 477 1.960763 TTGCATGTGCGCGAAGACT 60.961 52.632 12.10 0.00 45.83 3.24
477 478 1.506309 TTGCATGTGCGCGAAGACTT 61.506 50.000 12.10 0.00 45.83 3.01
478 479 1.225854 GCATGTGCGCGAAGACTTC 60.226 57.895 12.10 5.03 0.00 3.01
479 480 1.630244 GCATGTGCGCGAAGACTTCT 61.630 55.000 12.10 0.00 0.00 2.85
480 481 0.368227 CATGTGCGCGAAGACTTCTC 59.632 55.000 12.10 4.38 0.00 2.87
481 482 1.073216 ATGTGCGCGAAGACTTCTCG 61.073 55.000 20.44 20.44 40.57 4.04
488 489 2.051879 CGAAGACTTCTCGCTTGTCA 57.948 50.000 13.22 0.00 33.56 3.58
489 490 2.600731 CGAAGACTTCTCGCTTGTCAT 58.399 47.619 13.22 0.00 33.56 3.06
490 491 2.596419 CGAAGACTTCTCGCTTGTCATC 59.404 50.000 13.22 0.00 33.56 2.92
491 492 3.579709 GAAGACTTCTCGCTTGTCATCA 58.420 45.455 8.00 0.00 31.37 3.07
492 493 2.953020 AGACTTCTCGCTTGTCATCAC 58.047 47.619 0.00 0.00 33.56 3.06
493 494 2.297315 AGACTTCTCGCTTGTCATCACA 59.703 45.455 0.00 0.00 33.56 3.58
494 495 3.059884 GACTTCTCGCTTGTCATCACAA 58.940 45.455 0.00 0.00 40.40 3.33
503 504 1.896220 TGTCATCACAAGGTGAAGCC 58.104 50.000 2.87 0.00 45.96 4.35
504 505 1.142667 TGTCATCACAAGGTGAAGCCA 59.857 47.619 2.87 0.00 45.96 4.75
505 506 2.229792 GTCATCACAAGGTGAAGCCAA 58.770 47.619 2.87 0.00 45.96 4.52
506 507 2.030805 GTCATCACAAGGTGAAGCCAAC 60.031 50.000 2.87 0.00 45.96 3.77
507 508 2.158623 TCATCACAAGGTGAAGCCAACT 60.159 45.455 2.87 0.00 45.96 3.16
508 509 1.967319 TCACAAGGTGAAGCCAACTC 58.033 50.000 0.00 0.00 39.98 3.01
509 510 0.954452 CACAAGGTGAAGCCAACTCC 59.046 55.000 0.00 0.00 39.98 3.85
510 511 0.535102 ACAAGGTGAAGCCAACTCCG 60.535 55.000 0.00 0.00 39.98 4.63
511 512 1.073199 AAGGTGAAGCCAACTCCGG 59.927 57.895 0.00 0.00 39.98 5.14
512 513 1.705997 AAGGTGAAGCCAACTCCGGT 61.706 55.000 0.00 0.00 39.98 5.28
513 514 0.834687 AGGTGAAGCCAACTCCGGTA 60.835 55.000 0.00 0.00 34.69 4.02
514 515 0.391263 GGTGAAGCCAACTCCGGTAG 60.391 60.000 0.00 0.00 37.17 3.18
515 516 0.606604 GTGAAGCCAACTCCGGTAGA 59.393 55.000 0.00 0.00 0.00 2.59
516 517 1.001633 GTGAAGCCAACTCCGGTAGAA 59.998 52.381 0.00 0.00 0.00 2.10
517 518 1.275291 TGAAGCCAACTCCGGTAGAAG 59.725 52.381 0.00 0.00 0.00 2.85
518 519 1.549170 GAAGCCAACTCCGGTAGAAGA 59.451 52.381 0.00 0.00 0.00 2.87
519 520 1.187087 AGCCAACTCCGGTAGAAGAG 58.813 55.000 0.00 0.00 36.16 2.85
520 521 0.460459 GCCAACTCCGGTAGAAGAGC 60.460 60.000 0.00 0.00 33.18 4.09
526 527 2.278013 CGGTAGAAGAGCGGCGAC 60.278 66.667 12.98 3.29 45.37 5.19
527 528 2.882876 GGTAGAAGAGCGGCGACA 59.117 61.111 12.98 0.00 0.00 4.35
528 529 1.226717 GGTAGAAGAGCGGCGACAG 60.227 63.158 12.98 0.00 0.00 3.51
529 530 1.507174 GTAGAAGAGCGGCGACAGT 59.493 57.895 12.98 0.00 0.00 3.55
530 531 0.798771 GTAGAAGAGCGGCGACAGTG 60.799 60.000 12.98 0.00 0.00 3.66
531 532 1.934220 TAGAAGAGCGGCGACAGTGG 61.934 60.000 12.98 0.00 0.00 4.00
532 533 3.575351 GAAGAGCGGCGACAGTGGT 62.575 63.158 12.98 0.00 0.00 4.16
533 534 3.865929 AAGAGCGGCGACAGTGGTG 62.866 63.158 12.98 0.00 0.00 4.17
551 552 3.777925 CGTCGGCGGCTTGTTCTG 61.778 66.667 10.76 0.00 0.00 3.02
552 553 3.423154 GTCGGCGGCTTGTTCTGG 61.423 66.667 3.23 0.00 0.00 3.86
558 559 3.741476 GGCTTGTTCTGGCGGCAG 61.741 66.667 31.58 31.58 0.00 4.85
559 560 4.410743 GCTTGTTCTGGCGGCAGC 62.411 66.667 32.43 20.39 44.18 5.25
573 574 4.175599 CAGCAGTGCTCGTTCGAT 57.824 55.556 16.58 0.00 36.40 3.59
574 575 1.706301 CAGCAGTGCTCGTTCGATG 59.294 57.895 16.58 0.00 36.40 3.84
575 576 2.097038 AGCAGTGCTCGTTCGATGC 61.097 57.895 13.14 9.51 30.62 3.91
576 577 2.097038 GCAGTGCTCGTTCGATGCT 61.097 57.895 8.18 1.11 0.00 3.79
577 578 1.994467 CAGTGCTCGTTCGATGCTC 59.006 57.895 13.91 11.44 0.00 4.26
578 579 0.457509 CAGTGCTCGTTCGATGCTCT 60.458 55.000 13.91 12.85 0.00 4.09
579 580 0.179150 AGTGCTCGTTCGATGCTCTC 60.179 55.000 13.91 7.75 0.00 3.20
591 592 2.649516 GATGCTCTCGAGATCTTGACG 58.350 52.381 17.03 3.23 0.00 4.35
592 593 1.454201 TGCTCTCGAGATCTTGACGT 58.546 50.000 17.03 0.00 0.00 4.34
593 594 2.629051 TGCTCTCGAGATCTTGACGTA 58.371 47.619 17.03 0.00 0.00 3.57
594 595 3.007635 TGCTCTCGAGATCTTGACGTAA 58.992 45.455 17.03 0.00 0.00 3.18
595 596 3.628032 TGCTCTCGAGATCTTGACGTAAT 59.372 43.478 17.03 0.00 0.00 1.89
596 597 4.215965 GCTCTCGAGATCTTGACGTAATC 58.784 47.826 17.03 0.00 0.00 1.75
597 598 4.024387 GCTCTCGAGATCTTGACGTAATCT 60.024 45.833 17.03 0.00 32.53 2.40
598 599 5.504994 GCTCTCGAGATCTTGACGTAATCTT 60.505 44.000 17.03 0.00 30.04 2.40
599 600 6.438259 TCTCGAGATCTTGACGTAATCTTT 57.562 37.500 12.08 0.00 30.04 2.52
600 601 7.549615 TCTCGAGATCTTGACGTAATCTTTA 57.450 36.000 12.08 0.00 30.04 1.85
601 602 8.155821 TCTCGAGATCTTGACGTAATCTTTAT 57.844 34.615 12.08 0.00 30.04 1.40
602 603 8.622157 TCTCGAGATCTTGACGTAATCTTTATT 58.378 33.333 12.08 0.00 30.04 1.40
603 604 9.880064 CTCGAGATCTTGACGTAATCTTTATTA 57.120 33.333 6.58 0.00 30.04 0.98
625 626 7.849804 TTATGTTTGAGATGCTTTCTACTCC 57.150 36.000 0.00 0.00 33.74 3.85
626 627 4.579869 TGTTTGAGATGCTTTCTACTCCC 58.420 43.478 0.00 0.00 33.74 4.30
627 628 4.287067 TGTTTGAGATGCTTTCTACTCCCT 59.713 41.667 0.00 0.00 33.74 4.20
628 629 4.744795 TTGAGATGCTTTCTACTCCCTC 57.255 45.455 0.00 0.00 33.74 4.30
629 630 3.987745 TGAGATGCTTTCTACTCCCTCT 58.012 45.455 0.00 0.00 33.74 3.69
630 631 3.703556 TGAGATGCTTTCTACTCCCTCTG 59.296 47.826 0.00 0.00 33.74 3.35
631 632 3.704061 GAGATGCTTTCTACTCCCTCTGT 59.296 47.826 0.00 0.00 33.74 3.41
632 633 4.873010 AGATGCTTTCTACTCCCTCTGTA 58.127 43.478 0.00 0.00 30.96 2.74
633 634 5.273208 AGATGCTTTCTACTCCCTCTGTAA 58.727 41.667 0.00 0.00 30.96 2.41
634 635 5.721960 AGATGCTTTCTACTCCCTCTGTAAA 59.278 40.000 0.00 0.00 30.96 2.01
635 636 6.385467 AGATGCTTTCTACTCCCTCTGTAAAT 59.615 38.462 0.00 0.00 30.96 1.40
636 637 6.374417 TGCTTTCTACTCCCTCTGTAAATT 57.626 37.500 0.00 0.00 0.00 1.82
637 638 7.490657 TGCTTTCTACTCCCTCTGTAAATTA 57.509 36.000 0.00 0.00 0.00 1.40
638 639 7.913789 TGCTTTCTACTCCCTCTGTAAATTAA 58.086 34.615 0.00 0.00 0.00 1.40
639 640 8.548877 TGCTTTCTACTCCCTCTGTAAATTAAT 58.451 33.333 0.00 0.00 0.00 1.40
699 700 9.788889 AAACCTCTTATATTAATTTACGGAGGG 57.211 33.333 22.81 12.32 41.23 4.30
700 701 8.731591 ACCTCTTATATTAATTTACGGAGGGA 57.268 34.615 22.81 0.00 41.23 4.20
701 702 8.813951 ACCTCTTATATTAATTTACGGAGGGAG 58.186 37.037 22.81 9.88 41.23 4.30
702 703 8.813951 CCTCTTATATTAATTTACGGAGGGAGT 58.186 37.037 17.17 0.00 35.53 3.85
708 709 4.750021 AATTTACGGAGGGAGTACTTCC 57.250 45.455 12.91 12.91 46.00 3.46
723 724 8.937634 GGAGTACTTCCGATGAACTTTTATAA 57.062 34.615 0.00 0.00 35.91 0.98
724 725 9.543783 GGAGTACTTCCGATGAACTTTTATAAT 57.456 33.333 0.00 0.00 35.91 1.28
729 730 9.543783 ACTTCCGATGAACTTTTATAATAGGTC 57.456 33.333 12.55 12.55 0.00 3.85
730 731 9.765795 CTTCCGATGAACTTTTATAATAGGTCT 57.234 33.333 18.18 7.32 0.00 3.85
731 732 9.542462 TTCCGATGAACTTTTATAATAGGTCTG 57.458 33.333 18.18 10.26 0.00 3.51
732 733 8.920174 TCCGATGAACTTTTATAATAGGTCTGA 58.080 33.333 18.18 9.38 0.00 3.27
733 734 9.712305 CCGATGAACTTTTATAATAGGTCTGAT 57.288 33.333 18.18 7.67 0.00 2.90
771 772 5.480642 ACTGCAAGATGCTAGTATATGCT 57.519 39.130 22.68 0.00 45.31 3.79
774 775 5.970592 TGCAAGATGCTAGTATATGCTAGG 58.029 41.667 24.05 11.05 45.31 3.02
776 777 6.663523 TGCAAGATGCTAGTATATGCTAGGTA 59.336 38.462 24.05 9.31 45.31 3.08
784 785 4.653868 AGTATATGCTAGGTACTGACGCT 58.346 43.478 0.00 0.00 41.52 5.07
815 816 6.585322 ACTGTAAAAATAGCTGACGTGTCTAC 59.415 38.462 0.00 0.00 0.00 2.59
827 830 7.172532 AGCTGACGTGTCTACAAAAATGATTTA 59.827 33.333 0.00 0.00 0.00 1.40
890 894 8.902040 AAGCGATTTTTATCTCTGCTTAAAAG 57.098 30.769 0.00 0.00 39.22 2.27
900 907 4.887071 TCTCTGCTTAAAAGAGGCAACAAA 59.113 37.500 12.62 0.00 41.33 2.83
901 908 5.009010 TCTCTGCTTAAAAGAGGCAACAAAG 59.991 40.000 12.62 0.00 41.33 2.77
902 909 4.887071 TCTGCTTAAAAGAGGCAACAAAGA 59.113 37.500 0.00 0.00 41.41 2.52
903 910 4.932146 TGCTTAAAAGAGGCAACAAAGAC 58.068 39.130 0.00 0.00 41.41 3.01
946 969 2.998670 CTCGATTCCATCCCATCATTCG 59.001 50.000 0.00 0.00 0.00 3.34
948 971 1.815003 GATTCCATCCCATCATTCGCC 59.185 52.381 0.00 0.00 0.00 5.54
953 976 0.324614 ATCCCATCATTCGCCGCATA 59.675 50.000 0.00 0.00 0.00 3.14
954 977 0.320683 TCCCATCATTCGCCGCATAG 60.321 55.000 0.00 0.00 0.00 2.23
955 978 0.320683 CCCATCATTCGCCGCATAGA 60.321 55.000 0.00 0.00 0.00 1.98
956 979 1.676916 CCCATCATTCGCCGCATAGAT 60.677 52.381 0.00 0.00 0.00 1.98
957 980 1.662629 CCATCATTCGCCGCATAGATC 59.337 52.381 0.00 0.00 0.00 2.75
958 981 2.340337 CATCATTCGCCGCATAGATCA 58.660 47.619 0.00 0.00 0.00 2.92
959 982 1.783284 TCATTCGCCGCATAGATCAC 58.217 50.000 0.00 0.00 0.00 3.06
960 983 0.792640 CATTCGCCGCATAGATCACC 59.207 55.000 0.00 0.00 0.00 4.02
961 984 0.392706 ATTCGCCGCATAGATCACCA 59.607 50.000 0.00 0.00 0.00 4.17
962 985 0.529773 TTCGCCGCATAGATCACCAC 60.530 55.000 0.00 0.00 0.00 4.16
963 986 1.068083 CGCCGCATAGATCACCACT 59.932 57.895 0.00 0.00 0.00 4.00
964 987 0.313987 CGCCGCATAGATCACCACTA 59.686 55.000 0.00 0.00 0.00 2.74
965 988 1.667177 CGCCGCATAGATCACCACTAG 60.667 57.143 0.00 0.00 0.00 2.57
966 989 1.341531 GCCGCATAGATCACCACTAGT 59.658 52.381 0.00 0.00 0.00 2.57
967 990 2.608261 GCCGCATAGATCACCACTAGTC 60.608 54.545 0.00 0.00 0.00 2.59
968 991 2.029828 CCGCATAGATCACCACTAGTCC 60.030 54.545 0.00 0.00 0.00 3.85
969 992 2.887783 CGCATAGATCACCACTAGTCCT 59.112 50.000 0.00 0.00 0.00 3.85
970 993 3.304996 CGCATAGATCACCACTAGTCCTG 60.305 52.174 0.00 0.00 0.00 3.86
971 994 3.006323 GCATAGATCACCACTAGTCCTGG 59.994 52.174 0.00 0.00 34.62 4.45
972 995 1.490574 AGATCACCACTAGTCCTGGC 58.509 55.000 0.00 0.00 31.13 4.85
973 996 1.195115 GATCACCACTAGTCCTGGCA 58.805 55.000 0.00 0.00 31.13 4.92
974 997 1.765314 GATCACCACTAGTCCTGGCAT 59.235 52.381 0.00 0.00 31.13 4.40
975 998 1.195115 TCACCACTAGTCCTGGCATC 58.805 55.000 0.00 0.00 31.13 3.91
976 999 0.179000 CACCACTAGTCCTGGCATCC 59.821 60.000 0.00 0.00 31.13 3.51
977 1000 0.252696 ACCACTAGTCCTGGCATCCA 60.253 55.000 0.00 0.00 31.13 3.41
1366 1395 7.151308 CAGTAAACAGATGAGTTCTTCAGTCT 58.849 38.462 0.00 0.00 39.68 3.24
1413 1442 5.381757 TGTAAATTGGGCTTAGTGAGTGTT 58.618 37.500 0.00 0.00 0.00 3.32
1448 1477 6.045318 AGATTTGATCTGGTTATGAGTGTCG 58.955 40.000 0.00 0.00 38.44 4.35
1465 1494 3.495753 GTGTCGGTTAATTCAGTTCGGTT 59.504 43.478 0.00 0.00 0.00 4.44
1467 1496 3.124128 GTCGGTTAATTCAGTTCGGTTCC 59.876 47.826 0.00 0.00 0.00 3.62
1490 1519 6.436847 TCCTGAATTAATTTCTGCATCACCAA 59.563 34.615 1.43 0.00 35.23 3.67
1667 1696 0.320697 AACAGAGGTAGCCGGTTCAC 59.679 55.000 1.90 0.00 0.00 3.18
1684 1713 6.582295 CCGGTTCACTGATTTGTTTTCTTATG 59.418 38.462 0.00 0.00 0.00 1.90
1685 1714 7.359595 CGGTTCACTGATTTGTTTTCTTATGA 58.640 34.615 0.00 0.00 0.00 2.15
1686 1715 7.535258 CGGTTCACTGATTTGTTTTCTTATGAG 59.465 37.037 0.00 0.00 0.00 2.90
1687 1716 7.327032 GGTTCACTGATTTGTTTTCTTATGAGC 59.673 37.037 0.00 0.00 0.00 4.26
1688 1717 7.750229 TCACTGATTTGTTTTCTTATGAGCT 57.250 32.000 0.00 0.00 0.00 4.09
1756 1785 7.065085 CACTGATCCGGAAAATTAGCATATAGG 59.935 40.741 9.01 0.00 0.00 2.57
1758 1787 7.458397 TGATCCGGAAAATTAGCATATAGGTT 58.542 34.615 9.01 0.00 0.00 3.50
1777 1812 2.551459 GTTCATATGGGCAGAGCATGTC 59.449 50.000 2.13 0.00 0.00 3.06
1793 1828 3.251729 GCATGTCTGACATTTCACACTGT 59.748 43.478 20.13 0.00 36.53 3.55
1804 1839 1.154599 CACACTGTGATTGTCGCGC 60.155 57.895 15.86 0.00 35.23 6.86
1857 1892 1.202031 CGCCTGTCGAATTTTGTAGCC 60.202 52.381 0.00 0.00 41.67 3.93
1878 1913 0.967380 AGGAGGGCGGCAATTTTCAG 60.967 55.000 12.47 0.00 0.00 3.02
1931 1966 1.215647 CGTTCTCCTTCCCGGTGAG 59.784 63.158 0.00 0.65 36.69 3.51
1938 1973 3.649277 CTTCCCGGTGAGGCAGACG 62.649 68.421 0.00 0.00 39.21 4.18
1947 1982 2.101582 GGTGAGGCAGACGTCTATTGAT 59.898 50.000 19.57 2.57 0.00 2.57
2030 2068 8.348285 TCTTTTCCCGAATACAATTTTCTCAT 57.652 30.769 0.00 0.00 0.00 2.90
2081 2119 1.972872 ACCAAGAGTTGCAAGACCAG 58.027 50.000 0.00 0.00 0.00 4.00
2095 2133 1.988107 AGACCAGAAATTCCCTGCTCA 59.012 47.619 3.09 0.00 0.00 4.26
2150 2188 7.934457 AGCTTATGGATTAGCATGTTAGTTTG 58.066 34.615 0.00 0.00 39.85 2.93
2176 2214 4.408993 TTCAGTTGAATTCATGCTCACG 57.591 40.909 9.40 1.63 0.00 4.35
2190 2228 4.472691 TGCTCACGATAAAGCAATATGC 57.527 40.909 0.00 0.00 45.09 3.14
2271 2309 2.092968 GGGGCTTGACATGAGTGTATCA 60.093 50.000 0.00 0.00 43.70 2.15
2371 2409 6.993786 TTCTGTATCGGAAAATGCACATAA 57.006 33.333 0.00 0.00 0.00 1.90
2373 2411 5.295787 TCTGTATCGGAAAATGCACATAACC 59.704 40.000 0.00 0.00 0.00 2.85
2377 2415 3.570125 TCGGAAAATGCACATAACCACAA 59.430 39.130 0.00 0.00 0.00 3.33
2385 2423 5.078411 TGCACATAACCACAACAAACTTT 57.922 34.783 0.00 0.00 0.00 2.66
2386 2424 4.867047 TGCACATAACCACAACAAACTTTG 59.133 37.500 0.00 0.00 0.00 2.77
2387 2425 4.260172 GCACATAACCACAACAAACTTTGC 60.260 41.667 1.14 0.00 0.00 3.68
2388 2426 5.108517 CACATAACCACAACAAACTTTGCT 58.891 37.500 1.14 0.00 0.00 3.91
2389 2427 5.231991 CACATAACCACAACAAACTTTGCTC 59.768 40.000 1.14 0.00 0.00 4.26
2390 2428 3.951775 AACCACAACAAACTTTGCTCA 57.048 38.095 1.14 0.00 0.00 4.26
2391 2429 3.508744 ACCACAACAAACTTTGCTCAG 57.491 42.857 1.14 0.00 0.00 3.35
2393 2431 4.013728 ACCACAACAAACTTTGCTCAGTA 58.986 39.130 1.14 0.00 0.00 2.74
2394 2432 4.644685 ACCACAACAAACTTTGCTCAGTAT 59.355 37.500 1.14 0.00 0.00 2.12
2395 2433 5.825679 ACCACAACAAACTTTGCTCAGTATA 59.174 36.000 1.14 0.00 0.00 1.47
2396 2434 6.320164 ACCACAACAAACTTTGCTCAGTATAA 59.680 34.615 1.14 0.00 0.00 0.98
2397 2435 6.857964 CCACAACAAACTTTGCTCAGTATAAG 59.142 38.462 1.14 0.00 0.00 1.73
2398 2436 7.255104 CCACAACAAACTTTGCTCAGTATAAGA 60.255 37.037 1.14 0.00 0.00 2.10
2399 2437 8.128582 CACAACAAACTTTGCTCAGTATAAGAA 58.871 33.333 1.14 0.00 0.00 2.52
2400 2438 8.682710 ACAACAAACTTTGCTCAGTATAAGAAA 58.317 29.630 1.14 0.00 0.00 2.52
2401 2439 9.515020 CAACAAACTTTGCTCAGTATAAGAAAA 57.485 29.630 1.14 0.00 0.00 2.29
2402 2440 9.516314 AACAAACTTTGCTCAGTATAAGAAAAC 57.484 29.630 1.14 0.00 0.00 2.43
2403 2441 8.682710 ACAAACTTTGCTCAGTATAAGAAAACA 58.317 29.630 1.14 0.00 0.00 2.83
2404 2442 9.515020 CAAACTTTGCTCAGTATAAGAAAACAA 57.485 29.630 0.00 0.00 0.00 2.83
2407 2445 9.899226 ACTTTGCTCAGTATAAGAAAACAAATC 57.101 29.630 0.00 0.00 0.00 2.17
2469 2507 7.993183 CCAATTACCATAGTGGATACTGAACTT 59.007 37.037 2.45 0.00 40.96 2.66
2502 2540 1.226746 GTGCTCTGCTTTGTTACGGT 58.773 50.000 0.00 0.00 0.00 4.83
2593 2651 0.104304 ATACCGTTGGAGCCTTAGCG 59.896 55.000 0.00 0.00 46.67 4.26
2611 2669 1.451936 GGGAGCGCACTATTGGGAT 59.548 57.895 11.47 0.00 37.91 3.85
2674 2732 2.225491 TGCTTGCTACATTGAACGAACC 59.775 45.455 0.00 0.00 0.00 3.62
2735 2793 1.535462 GAAACACGGTATGCTGCAACT 59.465 47.619 6.36 0.00 0.00 3.16
2738 2796 1.290203 CACGGTATGCTGCAACTAGG 58.710 55.000 6.36 0.00 0.00 3.02
2749 2807 4.253685 GCTGCAACTAGGTCACATCTTTA 58.746 43.478 0.00 0.00 0.00 1.85
2759 2817 8.822805 ACTAGGTCACATCTTTAATTTACTCCA 58.177 33.333 0.00 0.00 0.00 3.86
2844 2910 8.429641 AGTGAGTGGAGTAAAATGAAGTCTTTA 58.570 33.333 0.00 0.00 0.00 1.85
2845 2911 9.220767 GTGAGTGGAGTAAAATGAAGTCTTTAT 57.779 33.333 0.00 0.00 0.00 1.40
2846 2912 9.793259 TGAGTGGAGTAAAATGAAGTCTTTATT 57.207 29.630 0.00 0.00 0.00 1.40
2890 2956 6.135454 TCAATCAACCCACATAGCCATAAAT 58.865 36.000 0.00 0.00 0.00 1.40
2897 2964 7.726033 ACCCACATAGCCATAAATTTTTGTA 57.274 32.000 7.69 0.00 0.00 2.41
2933 3016 7.042797 TGCTGGAAATAAGAGAATAAATGCC 57.957 36.000 0.00 0.00 0.00 4.40
2934 3017 6.606796 TGCTGGAAATAAGAGAATAAATGCCA 59.393 34.615 0.00 0.00 0.00 4.92
2935 3018 7.144000 GCTGGAAATAAGAGAATAAATGCCAG 58.856 38.462 0.00 0.00 40.60 4.85
2936 3019 7.042797 TGGAAATAAGAGAATAAATGCCAGC 57.957 36.000 0.00 0.00 0.00 4.85
2937 3020 6.606796 TGGAAATAAGAGAATAAATGCCAGCA 59.393 34.615 0.00 0.00 0.00 4.41
2938 3021 6.920210 GGAAATAAGAGAATAAATGCCAGCAC 59.080 38.462 0.00 0.00 0.00 4.40
2939 3022 7.408756 AAATAAGAGAATAAATGCCAGCACA 57.591 32.000 0.00 0.00 0.00 4.57
2940 3023 7.592885 AATAAGAGAATAAATGCCAGCACAT 57.407 32.000 0.00 0.00 0.00 3.21
2941 3024 5.927281 AAGAGAATAAATGCCAGCACATT 57.073 34.783 0.00 0.00 42.01 2.71
2942 3025 5.258456 AGAGAATAAATGCCAGCACATTG 57.742 39.130 0.00 0.00 40.12 2.82
2943 3026 4.951715 AGAGAATAAATGCCAGCACATTGA 59.048 37.500 0.00 0.00 40.12 2.57
2944 3027 5.067413 AGAGAATAAATGCCAGCACATTGAG 59.933 40.000 0.00 0.00 40.12 3.02
2945 3028 4.708421 AGAATAAATGCCAGCACATTGAGT 59.292 37.500 0.00 0.00 40.12 3.41
2946 3029 5.186409 AGAATAAATGCCAGCACATTGAGTT 59.814 36.000 0.00 0.00 40.12 3.01
2947 3030 2.736144 AATGCCAGCACATTGAGTTG 57.264 45.000 0.00 0.00 38.80 3.16
2948 3031 0.892755 ATGCCAGCACATTGAGTTGG 59.107 50.000 11.66 11.66 0.00 3.77
2949 3032 0.467844 TGCCAGCACATTGAGTTGGT 60.468 50.000 16.03 0.00 0.00 3.67
2950 3033 0.675633 GCCAGCACATTGAGTTGGTT 59.324 50.000 16.03 0.00 0.00 3.67
2951 3034 1.885887 GCCAGCACATTGAGTTGGTTA 59.114 47.619 16.03 0.00 0.00 2.85
2952 3035 2.295909 GCCAGCACATTGAGTTGGTTAA 59.704 45.455 16.03 0.00 0.00 2.01
2953 3036 3.243704 GCCAGCACATTGAGTTGGTTAAA 60.244 43.478 16.03 0.00 0.00 1.52
2954 3037 4.549458 CCAGCACATTGAGTTGGTTAAAG 58.451 43.478 8.47 0.00 0.00 1.85
2955 3038 4.037923 CCAGCACATTGAGTTGGTTAAAGT 59.962 41.667 8.47 0.00 0.00 2.66
2956 3039 5.451798 CCAGCACATTGAGTTGGTTAAAGTT 60.452 40.000 8.47 0.00 0.00 2.66
2957 3040 6.042143 CAGCACATTGAGTTGGTTAAAGTTT 58.958 36.000 0.00 0.00 0.00 2.66
2958 3041 6.019640 CAGCACATTGAGTTGGTTAAAGTTTG 60.020 38.462 0.00 0.00 0.00 2.93
2959 3042 5.810074 GCACATTGAGTTGGTTAAAGTTTGT 59.190 36.000 0.00 0.00 0.00 2.83
2960 3043 6.975772 GCACATTGAGTTGGTTAAAGTTTGTA 59.024 34.615 0.00 0.00 0.00 2.41
2961 3044 7.489757 GCACATTGAGTTGGTTAAAGTTTGTAA 59.510 33.333 0.00 0.00 0.00 2.41
2962 3045 9.360093 CACATTGAGTTGGTTAAAGTTTGTAAA 57.640 29.630 0.00 0.00 0.00 2.01
2963 3046 9.930693 ACATTGAGTTGGTTAAAGTTTGTAAAA 57.069 25.926 0.00 0.00 0.00 1.52
2966 3049 9.930693 TTGAGTTGGTTAAAGTTTGTAAAATGT 57.069 25.926 0.00 0.00 0.00 2.71
2967 3050 9.360093 TGAGTTGGTTAAAGTTTGTAAAATGTG 57.640 29.630 0.00 0.00 0.00 3.21
2968 3051 9.361315 GAGTTGGTTAAAGTTTGTAAAATGTGT 57.639 29.630 0.00 0.00 0.00 3.72
2969 3052 9.361315 AGTTGGTTAAAGTTTGTAAAATGTGTC 57.639 29.630 0.00 0.00 0.00 3.67
2970 3053 9.141400 GTTGGTTAAAGTTTGTAAAATGTGTCA 57.859 29.630 0.00 0.00 0.00 3.58
2971 3054 9.877178 TTGGTTAAAGTTTGTAAAATGTGTCAT 57.123 25.926 0.00 0.00 0.00 3.06
2972 3055 9.877178 TGGTTAAAGTTTGTAAAATGTGTCATT 57.123 25.926 0.00 0.00 0.00 2.57
3021 3104 5.034797 GCACACTGAGTTGGTTAAAGTTTC 58.965 41.667 0.00 0.00 0.00 2.78
3092 3175 5.560722 TCCACTAACTGAATTTGACAGGA 57.439 39.130 0.00 0.00 39.38 3.86
3222 3312 5.404968 CCTGCAGATATTTGAGAAGACGATC 59.595 44.000 17.39 0.00 0.00 3.69
3246 3336 3.389983 CCGGGATGTACCTTGGAGAAATA 59.610 47.826 0.00 0.00 36.66 1.40
3249 3339 5.612351 GGGATGTACCTTGGAGAAATAGTC 58.388 45.833 0.00 0.00 38.98 2.59
3276 3366 0.322816 TGCTGGGAAAGATGGCTCAC 60.323 55.000 0.00 0.00 0.00 3.51
3286 3376 2.937519 AGATGGCTCACGAGTCTGATA 58.062 47.619 0.00 0.00 33.37 2.15
3288 3378 3.894427 AGATGGCTCACGAGTCTGATATT 59.106 43.478 0.00 0.00 33.37 1.28
3360 3451 5.382303 CAAGTTATTCCACGTTGTAGCTTG 58.618 41.667 0.00 0.00 32.05 4.01
3373 3464 3.076621 TGTAGCTTGCAGAGTCCAAATG 58.923 45.455 0.00 0.00 0.00 2.32
3390 3481 7.675619 AGTCCAAATGTATCCTTTTCCTTTCAT 59.324 33.333 0.00 0.00 0.00 2.57
3403 3494 7.307930 CCTTTTCCTTTCATAATTTTGTGCCAC 60.308 37.037 0.00 0.00 0.00 5.01
3417 3508 1.055849 TGCCACTCTAAGCTGAACCA 58.944 50.000 0.00 0.00 0.00 3.67
3525 3616 2.170607 ACATCATCGGGGTAAGTTCCTG 59.829 50.000 0.00 0.00 0.00 3.86
3876 3978 1.275471 ACATTGTCGTCGAGCACACG 61.275 55.000 0.00 0.00 38.67 4.49
4012 4116 1.077429 CCTGCTAGGAACCTTGGGC 60.077 63.158 0.00 2.93 37.67 5.36
4055 4159 3.547413 CGTGCTCAGGAACATATTGCATG 60.547 47.826 0.00 0.00 0.00 4.06
4062 4166 7.309012 GCTCAGGAACATATTGCATGAACATAT 60.309 37.037 0.00 0.00 0.00 1.78
4076 4183 8.090831 TGCATGAACATATTGAGAGGTAGATAC 58.909 37.037 0.00 0.00 0.00 2.24
4080 4187 8.633561 TGAACATATTGAGAGGTAGATACACAG 58.366 37.037 0.00 0.00 0.00 3.66
4088 4195 5.390387 AGAGGTAGATACACAGGATCTTCC 58.610 45.833 6.76 6.76 39.80 3.46
4098 4205 3.096092 ACAGGATCTTCCTCAGTGACTC 58.904 50.000 0.00 0.00 45.66 3.36
4099 4206 2.430332 CAGGATCTTCCTCAGTGACTCC 59.570 54.545 0.00 0.00 45.66 3.85
4322 4467 8.437274 TCCCTTTTGAGATAAGATATACTCCC 57.563 38.462 0.00 0.00 0.00 4.30
4323 4468 8.242325 TCCCTTTTGAGATAAGATATACTCCCT 58.758 37.037 0.00 0.00 0.00 4.20
4324 4469 8.536175 CCCTTTTGAGATAAGATATACTCCCTC 58.464 40.741 0.00 0.00 0.00 4.30
4325 4470 9.320295 CCTTTTGAGATAAGATATACTCCCTCT 57.680 37.037 0.00 0.00 0.00 3.69
4327 4472 9.661954 TTTTGAGATAAGATATACTCCCTCTGT 57.338 33.333 0.00 0.00 0.00 3.41
4343 4488 9.939424 ACTCCCTCTGTAAACTAATATAAGAGT 57.061 33.333 0.00 0.00 0.00 3.24
4345 4490 9.710818 TCCCTCTGTAAACTAATATAAGAGTGT 57.289 33.333 0.00 0.00 0.00 3.55
4363 4508 7.768807 AGAGTGTTTAGATCACTACTTCAGT 57.231 36.000 0.00 0.00 44.68 3.41
4377 4522 7.768807 ACTACTTCAGTGATCTAAACACTCT 57.231 36.000 0.00 0.00 45.15 3.24
4378 4523 7.822658 ACTACTTCAGTGATCTAAACACTCTC 58.177 38.462 0.00 0.00 45.15 3.20
4379 4524 6.656632 ACTTCAGTGATCTAAACACTCTCA 57.343 37.500 0.00 0.00 45.15 3.27
4380 4525 6.451393 ACTTCAGTGATCTAAACACTCTCAC 58.549 40.000 0.00 0.00 45.15 3.51
4381 4526 6.040955 ACTTCAGTGATCTAAACACTCTCACA 59.959 38.462 0.00 0.00 45.15 3.58
4382 4527 6.596309 TCAGTGATCTAAACACTCTCACAT 57.404 37.500 0.00 0.00 45.15 3.21
4383 4528 6.997655 TCAGTGATCTAAACACTCTCACATT 58.002 36.000 0.00 0.00 45.15 2.71
4384 4529 8.122472 TCAGTGATCTAAACACTCTCACATTA 57.878 34.615 0.00 0.00 45.15 1.90
4385 4530 8.246871 TCAGTGATCTAAACACTCTCACATTAG 58.753 37.037 0.00 0.00 45.15 1.73
4386 4531 8.031864 CAGTGATCTAAACACTCTCACATTAGT 58.968 37.037 0.00 0.00 45.15 2.24
4387 4532 8.589338 AGTGATCTAAACACTCTCACATTAGTT 58.411 33.333 0.00 0.00 43.84 2.24
4388 4533 9.209175 GTGATCTAAACACTCTCACATTAGTTT 57.791 33.333 0.00 0.00 36.94 2.66
4391 4536 8.738199 TCTAAACACTCTCACATTAGTTTACG 57.262 34.615 0.00 0.00 32.23 3.18
4392 4537 6.780706 AAACACTCTCACATTAGTTTACGG 57.219 37.500 0.00 0.00 0.00 4.02
4393 4538 5.717078 ACACTCTCACATTAGTTTACGGA 57.283 39.130 0.00 0.00 0.00 4.69
4394 4539 5.710984 ACACTCTCACATTAGTTTACGGAG 58.289 41.667 0.00 0.00 0.00 4.63
4395 4540 5.103000 CACTCTCACATTAGTTTACGGAGG 58.897 45.833 0.00 0.00 0.00 4.30
4396 4541 4.159879 ACTCTCACATTAGTTTACGGAGGG 59.840 45.833 0.00 0.00 0.00 4.30
4397 4542 4.346730 TCTCACATTAGTTTACGGAGGGA 58.653 43.478 0.00 0.00 0.00 4.20
4398 4543 4.401519 TCTCACATTAGTTTACGGAGGGAG 59.598 45.833 0.00 0.00 0.00 4.30
4490 4796 5.709966 TGCACAGTAATACAGACAGTAGTG 58.290 41.667 0.00 0.00 35.85 2.74
4576 4887 5.804692 TTGCATAAAGGTACAACCATACG 57.195 39.130 0.00 0.00 41.95 3.06
4578 4889 3.623960 GCATAAAGGTACAACCATACGCA 59.376 43.478 0.00 0.00 41.95 5.24
4634 4950 2.894307 GGTAACTTGAATCGCCACAC 57.106 50.000 0.00 0.00 0.00 3.82
4635 4951 2.147958 GGTAACTTGAATCGCCACACA 58.852 47.619 0.00 0.00 0.00 3.72
4636 4952 2.747446 GGTAACTTGAATCGCCACACAT 59.253 45.455 0.00 0.00 0.00 3.21
4643 4959 4.354071 TGAATCGCCACACATAATGTTG 57.646 40.909 0.00 0.00 40.64 3.33
4665 4981 2.560981 TGCTTTCTGTATCACTCGGACA 59.439 45.455 0.00 0.00 0.00 4.02
4813 5129 6.140737 CAGTCGAAGTGATACAAAAAGTTTGC 59.859 38.462 0.68 0.00 0.00 3.68
4814 5130 5.398416 GTCGAAGTGATACAAAAAGTTTGCC 59.602 40.000 0.68 0.00 0.00 4.52
4824 5140 3.488778 AAAAGTTTGCCAATGCCATCA 57.511 38.095 0.00 0.00 36.33 3.07
4841 5157 4.141144 ACCGCAAGTGACAAGGTG 57.859 55.556 0.00 0.00 33.37 4.00
4916 5232 6.575162 AAGTATGTTCCATTGAAGTTCACC 57.425 37.500 4.68 0.00 0.00 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
90 91 9.000486 GCTTTGACTGGTCTAAAGTACTTAAAT 58.000 33.333 8.92 0.00 33.91 1.40
91 92 7.988599 TGCTTTGACTGGTCTAAAGTACTTAAA 59.011 33.333 8.92 0.98 33.91 1.52
92 93 7.502696 TGCTTTGACTGGTCTAAAGTACTTAA 58.497 34.615 8.92 0.00 33.91 1.85
93 94 7.058023 TGCTTTGACTGGTCTAAAGTACTTA 57.942 36.000 8.92 0.00 33.91 2.24
94 95 5.925509 TGCTTTGACTGGTCTAAAGTACTT 58.074 37.500 1.12 1.12 33.91 2.24
95 96 5.070580 ACTGCTTTGACTGGTCTAAAGTACT 59.929 40.000 17.70 0.00 33.91 2.73
96 97 5.298347 ACTGCTTTGACTGGTCTAAAGTAC 58.702 41.667 17.70 0.00 33.91 2.73
97 98 5.546621 ACTGCTTTGACTGGTCTAAAGTA 57.453 39.130 17.70 14.84 33.91 2.24
98 99 4.423625 ACTGCTTTGACTGGTCTAAAGT 57.576 40.909 17.70 9.87 33.91 2.66
99 100 8.723942 ATATTACTGCTTTGACTGGTCTAAAG 57.276 34.615 14.89 14.89 34.21 1.85
100 101 9.515226 AAATATTACTGCTTTGACTGGTCTAAA 57.485 29.630 2.38 1.60 0.00 1.85
101 102 8.946085 CAAATATTACTGCTTTGACTGGTCTAA 58.054 33.333 2.38 0.47 32.83 2.10
102 103 7.552687 CCAAATATTACTGCTTTGACTGGTCTA 59.447 37.037 2.38 0.00 32.83 2.59
103 104 6.375455 CCAAATATTACTGCTTTGACTGGTCT 59.625 38.462 2.38 0.00 32.83 3.85
104 105 6.151144 ACCAAATATTACTGCTTTGACTGGTC 59.849 38.462 0.00 0.00 32.83 4.02
105 106 6.010219 ACCAAATATTACTGCTTTGACTGGT 58.990 36.000 0.00 0.00 32.83 4.00
106 107 6.375455 AGACCAAATATTACTGCTTTGACTGG 59.625 38.462 0.00 0.00 32.83 4.00
107 108 7.383102 AGACCAAATATTACTGCTTTGACTG 57.617 36.000 0.00 0.00 32.83 3.51
108 109 9.113838 CATAGACCAAATATTACTGCTTTGACT 57.886 33.333 0.00 0.00 32.83 3.41
109 110 8.893727 ACATAGACCAAATATTACTGCTTTGAC 58.106 33.333 0.00 0.00 32.83 3.18
110 111 9.109393 GACATAGACCAAATATTACTGCTTTGA 57.891 33.333 0.00 0.00 32.83 2.69
111 112 8.345565 GGACATAGACCAAATATTACTGCTTTG 58.654 37.037 0.00 0.00 0.00 2.77
112 113 8.275040 AGGACATAGACCAAATATTACTGCTTT 58.725 33.333 0.00 0.00 0.00 3.51
113 114 7.806180 AGGACATAGACCAAATATTACTGCTT 58.194 34.615 0.00 0.00 0.00 3.91
114 115 7.380423 AGGACATAGACCAAATATTACTGCT 57.620 36.000 0.00 0.00 0.00 4.24
115 116 8.148351 TGTAGGACATAGACCAAATATTACTGC 58.852 37.037 0.00 0.00 0.00 4.40
121 122 8.903820 GCTTTTTGTAGGACATAGACCAAATAT 58.096 33.333 0.00 0.00 0.00 1.28
122 123 7.065324 CGCTTTTTGTAGGACATAGACCAAATA 59.935 37.037 0.00 0.00 0.00 1.40
123 124 6.128007 CGCTTTTTGTAGGACATAGACCAAAT 60.128 38.462 0.00 0.00 0.00 2.32
124 125 5.180492 CGCTTTTTGTAGGACATAGACCAAA 59.820 40.000 0.00 0.00 0.00 3.28
125 126 4.693566 CGCTTTTTGTAGGACATAGACCAA 59.306 41.667 0.00 0.00 0.00 3.67
126 127 4.250464 CGCTTTTTGTAGGACATAGACCA 58.750 43.478 0.00 0.00 0.00 4.02
127 128 3.621715 CCGCTTTTTGTAGGACATAGACC 59.378 47.826 0.00 0.00 0.00 3.85
128 129 3.063588 GCCGCTTTTTGTAGGACATAGAC 59.936 47.826 0.00 0.00 0.00 2.59
129 130 3.055385 AGCCGCTTTTTGTAGGACATAGA 60.055 43.478 0.00 0.00 0.00 1.98
130 131 3.270877 AGCCGCTTTTTGTAGGACATAG 58.729 45.455 0.00 0.00 0.00 2.23
131 132 3.343941 AGCCGCTTTTTGTAGGACATA 57.656 42.857 0.00 0.00 0.00 2.29
132 133 2.200373 AGCCGCTTTTTGTAGGACAT 57.800 45.000 0.00 0.00 0.00 3.06
133 134 1.877443 GAAGCCGCTTTTTGTAGGACA 59.123 47.619 7.16 0.00 0.00 4.02
134 135 1.877443 TGAAGCCGCTTTTTGTAGGAC 59.123 47.619 7.16 0.00 0.00 3.85
135 136 1.877443 GTGAAGCCGCTTTTTGTAGGA 59.123 47.619 7.16 0.00 0.00 2.94
136 137 1.606668 TGTGAAGCCGCTTTTTGTAGG 59.393 47.619 7.16 0.00 0.00 3.18
137 138 2.032799 TGTGTGAAGCCGCTTTTTGTAG 59.967 45.455 7.16 0.00 0.00 2.74
138 139 2.017782 TGTGTGAAGCCGCTTTTTGTA 58.982 42.857 7.16 0.00 0.00 2.41
139 140 0.814457 TGTGTGAAGCCGCTTTTTGT 59.186 45.000 7.16 0.00 0.00 2.83
140 141 1.788308 CATGTGTGAAGCCGCTTTTTG 59.212 47.619 7.16 0.00 0.00 2.44
141 142 1.408702 ACATGTGTGAAGCCGCTTTTT 59.591 42.857 7.16 0.00 0.00 1.94
142 143 1.032014 ACATGTGTGAAGCCGCTTTT 58.968 45.000 7.16 0.00 0.00 2.27
143 144 2.719376 ACATGTGTGAAGCCGCTTT 58.281 47.368 7.16 0.00 0.00 3.51
144 145 4.481195 ACATGTGTGAAGCCGCTT 57.519 50.000 4.98 4.98 0.00 4.68
153 154 1.469703 CACTGGTATGCCACATGTGTG 59.530 52.381 23.79 15.96 45.23 3.82
154 155 1.350684 TCACTGGTATGCCACATGTGT 59.649 47.619 23.79 8.80 40.46 3.72
155 156 2.112380 TCACTGGTATGCCACATGTG 57.888 50.000 19.31 19.31 40.46 3.21
156 157 2.224744 TGTTCACTGGTATGCCACATGT 60.225 45.455 0.00 0.00 40.46 3.21
157 158 2.162208 GTGTTCACTGGTATGCCACATG 59.838 50.000 0.00 0.39 40.46 3.21
158 159 2.224744 TGTGTTCACTGGTATGCCACAT 60.225 45.455 0.00 0.00 40.46 3.21
159 160 1.141858 TGTGTTCACTGGTATGCCACA 59.858 47.619 0.00 0.00 40.46 4.17
160 161 1.535462 GTGTGTTCACTGGTATGCCAC 59.465 52.381 0.00 0.00 40.76 5.01
161 162 1.141858 TGTGTGTTCACTGGTATGCCA 59.858 47.619 1.39 1.39 44.14 4.92
162 163 1.890876 TGTGTGTTCACTGGTATGCC 58.109 50.000 4.59 0.00 44.14 4.40
163 164 3.980646 TTTGTGTGTTCACTGGTATGC 57.019 42.857 4.59 0.00 44.14 3.14
164 165 6.738114 AGATTTTTGTGTGTTCACTGGTATG 58.262 36.000 4.59 0.00 44.14 2.39
165 166 6.959639 AGATTTTTGTGTGTTCACTGGTAT 57.040 33.333 4.59 0.00 44.14 2.73
166 167 7.867305 TTAGATTTTTGTGTGTTCACTGGTA 57.133 32.000 4.59 0.00 44.14 3.25
167 168 6.767524 TTAGATTTTTGTGTGTTCACTGGT 57.232 33.333 4.59 0.00 44.14 4.00
168 169 8.472683 TTTTTAGATTTTTGTGTGTTCACTGG 57.527 30.769 4.59 0.00 44.14 4.00
215 216 9.987272 GCCTAAATATATTTTCATGCTTTTCCT 57.013 29.630 15.64 0.00 0.00 3.36
216 217 9.762933 TGCCTAAATATATTTTCATGCTTTTCC 57.237 29.630 15.64 0.00 0.00 3.13
312 313 8.662141 CGAACTCGAGGAGGATTAAAAATAAAA 58.338 33.333 18.41 0.00 43.02 1.52
313 314 7.820872 ACGAACTCGAGGAGGATTAAAAATAAA 59.179 33.333 18.41 0.00 43.02 1.40
314 315 7.325694 ACGAACTCGAGGAGGATTAAAAATAA 58.674 34.615 18.41 0.00 43.02 1.40
315 316 6.870769 ACGAACTCGAGGAGGATTAAAAATA 58.129 36.000 18.41 0.00 43.02 1.40
316 317 5.731591 ACGAACTCGAGGAGGATTAAAAAT 58.268 37.500 18.41 0.00 43.02 1.82
317 318 5.143376 ACGAACTCGAGGAGGATTAAAAA 57.857 39.130 18.41 0.00 43.02 1.94
318 319 4.796038 ACGAACTCGAGGAGGATTAAAA 57.204 40.909 18.41 0.00 43.02 1.52
319 320 4.673580 CGAACGAACTCGAGGAGGATTAAA 60.674 45.833 18.41 0.00 41.44 1.52
320 321 3.181503 CGAACGAACTCGAGGAGGATTAA 60.182 47.826 18.41 0.00 41.44 1.40
321 322 2.353889 CGAACGAACTCGAGGAGGATTA 59.646 50.000 18.41 0.00 41.44 1.75
322 323 1.132643 CGAACGAACTCGAGGAGGATT 59.867 52.381 18.41 0.45 41.44 3.01
323 324 0.733729 CGAACGAACTCGAGGAGGAT 59.266 55.000 18.41 0.00 41.44 3.24
324 325 0.604780 ACGAACGAACTCGAGGAGGA 60.605 55.000 18.41 0.00 41.44 3.71
325 326 0.179194 GACGAACGAACTCGAGGAGG 60.179 60.000 18.41 7.34 41.44 4.30
326 327 0.797542 AGACGAACGAACTCGAGGAG 59.202 55.000 18.41 9.82 41.44 3.69
327 328 0.516001 CAGACGAACGAACTCGAGGA 59.484 55.000 18.41 0.00 41.44 3.71
328 329 0.454620 CCAGACGAACGAACTCGAGG 60.455 60.000 18.41 1.00 41.44 4.63
329 330 0.516001 TCCAGACGAACGAACTCGAG 59.484 55.000 11.84 11.84 41.44 4.04
330 331 0.236711 GTCCAGACGAACGAACTCGA 59.763 55.000 6.05 0.00 41.44 4.04
331 332 2.709631 GTCCAGACGAACGAACTCG 58.290 57.895 0.14 0.00 44.50 4.18
359 360 1.273886 GGGAATCTATGTCGGAGCTCC 59.726 57.143 23.79 23.79 0.00 4.70
360 361 1.068194 CGGGAATCTATGTCGGAGCTC 60.068 57.143 4.71 4.71 0.00 4.09
361 362 0.962489 CGGGAATCTATGTCGGAGCT 59.038 55.000 0.00 0.00 0.00 4.09
362 363 0.674534 ACGGGAATCTATGTCGGAGC 59.325 55.000 0.00 0.00 0.00 4.70
363 364 2.100916 ACAACGGGAATCTATGTCGGAG 59.899 50.000 0.00 0.00 0.00 4.63
364 365 2.100252 GACAACGGGAATCTATGTCGGA 59.900 50.000 0.00 0.00 32.09 4.55
365 366 2.100916 AGACAACGGGAATCTATGTCGG 59.899 50.000 0.00 0.00 43.85 4.79
366 367 3.066900 AGAGACAACGGGAATCTATGTCG 59.933 47.826 0.00 0.00 43.85 4.35
367 368 4.657436 AGAGACAACGGGAATCTATGTC 57.343 45.455 0.00 0.00 40.45 3.06
368 369 5.422214 AAAGAGACAACGGGAATCTATGT 57.578 39.130 0.00 0.00 0.00 2.29
369 370 6.806751 TCTAAAGAGACAACGGGAATCTATG 58.193 40.000 0.00 0.00 0.00 2.23
370 371 6.608002 ACTCTAAAGAGACAACGGGAATCTAT 59.392 38.462 13.84 0.00 44.74 1.98
371 372 5.950549 ACTCTAAAGAGACAACGGGAATCTA 59.049 40.000 13.84 0.00 44.74 1.98
372 373 4.773149 ACTCTAAAGAGACAACGGGAATCT 59.227 41.667 13.84 0.00 44.74 2.40
373 374 4.865365 CACTCTAAAGAGACAACGGGAATC 59.135 45.833 13.84 0.00 44.74 2.52
374 375 4.322801 CCACTCTAAAGAGACAACGGGAAT 60.323 45.833 13.84 0.00 44.74 3.01
375 376 3.006537 CCACTCTAAAGAGACAACGGGAA 59.993 47.826 13.84 0.00 44.74 3.97
376 377 2.561419 CCACTCTAAAGAGACAACGGGA 59.439 50.000 13.84 0.00 44.74 5.14
377 378 2.299297 ACCACTCTAAAGAGACAACGGG 59.701 50.000 13.84 7.30 44.74 5.28
378 379 3.005472 TCACCACTCTAAAGAGACAACGG 59.995 47.826 13.84 7.92 44.74 4.44
379 380 4.230657 CTCACCACTCTAAAGAGACAACG 58.769 47.826 13.84 0.00 44.74 4.10
380 381 4.039366 ACCTCACCACTCTAAAGAGACAAC 59.961 45.833 13.84 0.00 44.74 3.32
381 382 4.223953 ACCTCACCACTCTAAAGAGACAA 58.776 43.478 13.84 0.00 44.74 3.18
382 383 3.845860 ACCTCACCACTCTAAAGAGACA 58.154 45.455 13.84 0.00 44.74 3.41
383 384 4.875561 AACCTCACCACTCTAAAGAGAC 57.124 45.455 13.84 0.00 44.74 3.36
384 385 4.458295 CGTAACCTCACCACTCTAAAGAGA 59.542 45.833 13.84 0.00 44.74 3.10
386 387 3.508793 CCGTAACCTCACCACTCTAAAGA 59.491 47.826 0.00 0.00 0.00 2.52
387 388 3.257624 ACCGTAACCTCACCACTCTAAAG 59.742 47.826 0.00 0.00 0.00 1.85
388 389 3.233507 ACCGTAACCTCACCACTCTAAA 58.766 45.455 0.00 0.00 0.00 1.85
389 390 2.880443 ACCGTAACCTCACCACTCTAA 58.120 47.619 0.00 0.00 0.00 2.10
390 391 2.592102 ACCGTAACCTCACCACTCTA 57.408 50.000 0.00 0.00 0.00 2.43
391 392 1.713297 AACCGTAACCTCACCACTCT 58.287 50.000 0.00 0.00 0.00 3.24
392 393 2.036862 AGAAACCGTAACCTCACCACTC 59.963 50.000 0.00 0.00 0.00 3.51
393 394 2.036862 GAGAAACCGTAACCTCACCACT 59.963 50.000 0.00 0.00 0.00 4.00
394 395 2.410939 GAGAAACCGTAACCTCACCAC 58.589 52.381 0.00 0.00 0.00 4.16
395 396 1.000060 CGAGAAACCGTAACCTCACCA 60.000 52.381 0.00 0.00 0.00 4.17
396 397 1.000171 ACGAGAAACCGTAACCTCACC 60.000 52.381 0.00 0.00 41.44 4.02
397 398 2.287788 TGACGAGAAACCGTAACCTCAC 60.288 50.000 0.00 0.00 43.49 3.51
398 399 1.955778 TGACGAGAAACCGTAACCTCA 59.044 47.619 0.00 0.00 43.49 3.86
399 400 2.712057 TGACGAGAAACCGTAACCTC 57.288 50.000 0.00 0.00 43.49 3.85
400 401 2.298163 ACATGACGAGAAACCGTAACCT 59.702 45.455 0.00 0.00 43.49 3.50
401 402 2.410730 CACATGACGAGAAACCGTAACC 59.589 50.000 0.00 0.00 43.49 2.85
402 403 2.410730 CCACATGACGAGAAACCGTAAC 59.589 50.000 0.00 0.00 43.49 2.50
403 404 2.679450 CCACATGACGAGAAACCGTAA 58.321 47.619 0.00 0.00 43.49 3.18
404 405 1.670674 GCCACATGACGAGAAACCGTA 60.671 52.381 0.00 0.00 43.49 4.02
405 406 0.949105 GCCACATGACGAGAAACCGT 60.949 55.000 0.00 0.00 46.43 4.83
406 407 1.787847 GCCACATGACGAGAAACCG 59.212 57.895 0.00 0.00 0.00 4.44
407 408 0.669318 TCGCCACATGACGAGAAACC 60.669 55.000 0.00 0.00 33.69 3.27
408 409 2.822306 TCGCCACATGACGAGAAAC 58.178 52.632 0.00 0.00 33.69 2.78
413 414 1.358877 CAAATCTCGCCACATGACGA 58.641 50.000 0.00 4.86 36.73 4.20
414 415 0.374758 CCAAATCTCGCCACATGACG 59.625 55.000 0.00 0.00 0.00 4.35
415 416 1.131126 CACCAAATCTCGCCACATGAC 59.869 52.381 0.00 0.00 0.00 3.06
416 417 1.271325 ACACCAAATCTCGCCACATGA 60.271 47.619 0.00 0.00 0.00 3.07
417 418 1.131126 GACACCAAATCTCGCCACATG 59.869 52.381 0.00 0.00 0.00 3.21
418 419 1.271325 TGACACCAAATCTCGCCACAT 60.271 47.619 0.00 0.00 0.00 3.21
419 420 0.107643 TGACACCAAATCTCGCCACA 59.892 50.000 0.00 0.00 0.00 4.17
420 421 1.197721 CTTGACACCAAATCTCGCCAC 59.802 52.381 0.00 0.00 0.00 5.01
421 422 1.202758 ACTTGACACCAAATCTCGCCA 60.203 47.619 0.00 0.00 0.00 5.69
422 423 1.197721 CACTTGACACCAAATCTCGCC 59.802 52.381 0.00 0.00 0.00 5.54
423 424 1.400242 GCACTTGACACCAAATCTCGC 60.400 52.381 0.00 0.00 0.00 5.03
424 425 2.146342 AGCACTTGACACCAAATCTCG 58.854 47.619 0.00 0.00 0.00 4.04
425 426 3.565482 TGAAGCACTTGACACCAAATCTC 59.435 43.478 0.00 0.00 0.00 2.75
426 427 3.554934 TGAAGCACTTGACACCAAATCT 58.445 40.909 0.00 0.00 0.00 2.40
427 428 3.565482 TCTGAAGCACTTGACACCAAATC 59.435 43.478 0.00 0.00 0.00 2.17
428 429 3.554934 TCTGAAGCACTTGACACCAAAT 58.445 40.909 0.00 0.00 0.00 2.32
429 430 2.997980 TCTGAAGCACTTGACACCAAA 58.002 42.857 0.00 0.00 0.00 3.28
430 431 2.708216 TCTGAAGCACTTGACACCAA 57.292 45.000 0.00 0.00 0.00 3.67
431 432 2.369860 AGATCTGAAGCACTTGACACCA 59.630 45.455 0.00 0.00 0.00 4.17
432 433 3.051081 AGATCTGAAGCACTTGACACC 57.949 47.619 0.00 0.00 0.00 4.16
433 434 4.033817 GCATAGATCTGAAGCACTTGACAC 59.966 45.833 5.18 0.00 0.00 3.67
434 435 4.186926 GCATAGATCTGAAGCACTTGACA 58.813 43.478 5.18 0.00 0.00 3.58
435 436 3.244814 CGCATAGATCTGAAGCACTTGAC 59.755 47.826 5.18 0.00 0.00 3.18
436 437 3.118992 ACGCATAGATCTGAAGCACTTGA 60.119 43.478 5.18 0.00 0.00 3.02
437 438 3.193263 ACGCATAGATCTGAAGCACTTG 58.807 45.455 5.18 0.00 0.00 3.16
438 439 3.533606 ACGCATAGATCTGAAGCACTT 57.466 42.857 5.18 0.00 0.00 3.16
439 440 3.193263 CAACGCATAGATCTGAAGCACT 58.807 45.455 5.18 0.00 0.00 4.40
440 441 2.286067 GCAACGCATAGATCTGAAGCAC 60.286 50.000 5.18 0.00 0.00 4.40
441 442 1.935873 GCAACGCATAGATCTGAAGCA 59.064 47.619 5.18 0.00 0.00 3.91
442 443 1.935873 TGCAACGCATAGATCTGAAGC 59.064 47.619 5.18 5.66 31.71 3.86
456 457 2.866510 CTTCGCGCACATGCAACG 60.867 61.111 8.75 7.27 42.21 4.10
457 458 1.793613 GTCTTCGCGCACATGCAAC 60.794 57.895 8.75 0.00 42.21 4.17
458 459 1.506309 AAGTCTTCGCGCACATGCAA 61.506 50.000 8.75 0.00 42.21 4.08
459 460 1.900585 GAAGTCTTCGCGCACATGCA 61.901 55.000 8.75 0.00 42.21 3.96
460 461 1.225854 GAAGTCTTCGCGCACATGC 60.226 57.895 8.75 0.00 37.78 4.06
461 462 0.368227 GAGAAGTCTTCGCGCACATG 59.632 55.000 8.75 0.00 34.02 3.21
462 463 1.073216 CGAGAAGTCTTCGCGCACAT 61.073 55.000 22.79 0.00 45.20 3.21
463 464 1.729484 CGAGAAGTCTTCGCGCACA 60.729 57.895 22.79 0.00 45.20 4.57
464 465 3.065015 CGAGAAGTCTTCGCGCAC 58.935 61.111 22.79 0.00 45.20 5.34
469 470 2.051879 TGACAAGCGAGAAGTCTTCG 57.948 50.000 6.94 0.00 33.56 3.79
470 471 3.366422 GTGATGACAAGCGAGAAGTCTTC 59.634 47.826 4.26 4.26 37.12 2.87
471 472 3.243873 TGTGATGACAAGCGAGAAGTCTT 60.244 43.478 0.00 0.00 33.56 3.01
472 473 2.297315 TGTGATGACAAGCGAGAAGTCT 59.703 45.455 0.00 0.00 33.56 3.24
473 474 2.677199 TGTGATGACAAGCGAGAAGTC 58.323 47.619 0.00 0.00 0.00 3.01
474 475 2.820059 TGTGATGACAAGCGAGAAGT 57.180 45.000 0.00 0.00 0.00 3.01
483 484 2.229792 GGCTTCACCTTGTGATGACAA 58.770 47.619 12.63 0.00 42.79 3.18
484 485 1.896220 GGCTTCACCTTGTGATGACA 58.104 50.000 12.63 0.00 42.79 3.58
485 486 1.896220 TGGCTTCACCTTGTGATGAC 58.104 50.000 12.63 10.64 43.32 3.06
486 487 2.158623 AGTTGGCTTCACCTTGTGATGA 60.159 45.455 12.63 0.00 42.40 2.92
487 488 2.227388 GAGTTGGCTTCACCTTGTGATG 59.773 50.000 0.00 2.06 42.40 3.07
488 489 2.508526 GAGTTGGCTTCACCTTGTGAT 58.491 47.619 0.00 0.00 42.40 3.06
489 490 1.476833 GGAGTTGGCTTCACCTTGTGA 60.477 52.381 0.00 0.00 41.09 3.58
490 491 0.954452 GGAGTTGGCTTCACCTTGTG 59.046 55.000 0.00 0.00 40.22 3.33
491 492 0.535102 CGGAGTTGGCTTCACCTTGT 60.535 55.000 0.00 0.00 40.22 3.16
492 493 1.237285 CCGGAGTTGGCTTCACCTTG 61.237 60.000 0.00 0.00 40.22 3.61
493 494 1.073199 CCGGAGTTGGCTTCACCTT 59.927 57.895 0.00 0.00 40.22 3.50
494 495 0.834687 TACCGGAGTTGGCTTCACCT 60.835 55.000 9.46 0.00 40.22 4.00
495 496 0.391263 CTACCGGAGTTGGCTTCACC 60.391 60.000 9.46 0.00 39.84 4.02
496 497 0.606604 TCTACCGGAGTTGGCTTCAC 59.393 55.000 9.46 0.00 0.00 3.18
497 498 1.275291 CTTCTACCGGAGTTGGCTTCA 59.725 52.381 9.46 0.00 0.00 3.02
498 499 1.549170 TCTTCTACCGGAGTTGGCTTC 59.451 52.381 9.46 0.00 0.00 3.86
499 500 1.550976 CTCTTCTACCGGAGTTGGCTT 59.449 52.381 9.46 0.00 0.00 4.35
500 501 1.187087 CTCTTCTACCGGAGTTGGCT 58.813 55.000 9.46 0.00 0.00 4.75
501 502 0.460459 GCTCTTCTACCGGAGTTGGC 60.460 60.000 9.46 0.00 32.67 4.52
502 503 0.179134 CGCTCTTCTACCGGAGTTGG 60.179 60.000 9.46 0.00 32.67 3.77
503 504 0.179134 CCGCTCTTCTACCGGAGTTG 60.179 60.000 9.46 0.00 44.55 3.16
504 505 1.946475 GCCGCTCTTCTACCGGAGTT 61.946 60.000 9.46 0.00 44.55 3.01
505 506 2.416432 GCCGCTCTTCTACCGGAGT 61.416 63.158 9.46 0.00 44.55 3.85
506 507 2.413765 GCCGCTCTTCTACCGGAG 59.586 66.667 9.46 0.60 44.55 4.63
507 508 3.515286 CGCCGCTCTTCTACCGGA 61.515 66.667 9.46 0.00 44.55 5.14
508 509 3.515286 TCGCCGCTCTTCTACCGG 61.515 66.667 0.00 0.00 44.58 5.28
509 510 2.278013 GTCGCCGCTCTTCTACCG 60.278 66.667 0.00 0.00 0.00 4.02
510 511 1.226717 CTGTCGCCGCTCTTCTACC 60.227 63.158 0.00 0.00 0.00 3.18
511 512 0.798771 CACTGTCGCCGCTCTTCTAC 60.799 60.000 0.00 0.00 0.00 2.59
512 513 1.506718 CACTGTCGCCGCTCTTCTA 59.493 57.895 0.00 0.00 0.00 2.10
513 514 2.259818 CACTGTCGCCGCTCTTCT 59.740 61.111 0.00 0.00 0.00 2.85
514 515 2.811317 CCACTGTCGCCGCTCTTC 60.811 66.667 0.00 0.00 0.00 2.87
515 516 3.616721 ACCACTGTCGCCGCTCTT 61.617 61.111 0.00 0.00 0.00 2.85
516 517 4.363990 CACCACTGTCGCCGCTCT 62.364 66.667 0.00 0.00 0.00 4.09
534 535 3.777925 CAGAACAAGCCGCCGACG 61.778 66.667 0.00 0.00 39.67 5.12
535 536 3.423154 CCAGAACAAGCCGCCGAC 61.423 66.667 0.00 0.00 0.00 4.79
541 542 3.741476 CTGCCGCCAGAACAAGCC 61.741 66.667 0.00 0.00 41.77 4.35
542 543 4.410743 GCTGCCGCCAGAACAAGC 62.411 66.667 0.00 0.00 41.77 4.01
543 544 2.974489 CTGCTGCCGCCAGAACAAG 61.974 63.158 0.00 0.00 41.77 3.16
544 545 2.979676 CTGCTGCCGCCAGAACAA 60.980 61.111 0.00 0.00 41.77 2.83
545 546 4.254709 ACTGCTGCCGCCAGAACA 62.255 61.111 0.00 0.00 41.77 3.18
546 547 3.730761 CACTGCTGCCGCCAGAAC 61.731 66.667 0.00 0.00 41.77 3.01
553 554 3.782244 GAACGAGCACTGCTGCCG 61.782 66.667 8.69 9.40 45.53 5.69
554 555 3.782244 CGAACGAGCACTGCTGCC 61.782 66.667 8.69 0.00 45.53 4.85
555 556 2.097038 ATCGAACGAGCACTGCTGC 61.097 57.895 8.69 0.00 39.88 5.25
556 557 1.706301 CATCGAACGAGCACTGCTG 59.294 57.895 8.69 3.68 39.88 4.41
557 558 2.097038 GCATCGAACGAGCACTGCT 61.097 57.895 2.22 2.22 43.88 4.24
558 559 2.018582 GAGCATCGAACGAGCACTGC 62.019 60.000 11.00 11.00 0.00 4.40
559 560 0.457509 AGAGCATCGAACGAGCACTG 60.458 55.000 15.99 6.38 42.67 3.66
560 561 0.179150 GAGAGCATCGAACGAGCACT 60.179 55.000 15.99 14.90 42.67 4.40
561 562 2.283254 GAGAGCATCGAACGAGCAC 58.717 57.895 15.99 11.76 42.67 4.40
562 563 4.794164 GAGAGCATCGAACGAGCA 57.206 55.556 15.99 0.00 42.67 4.26
571 572 2.032799 ACGTCAAGATCTCGAGAGCATC 59.967 50.000 30.48 18.49 31.88 3.91
572 573 2.020720 ACGTCAAGATCTCGAGAGCAT 58.979 47.619 30.48 18.07 31.88 3.79
573 574 1.454201 ACGTCAAGATCTCGAGAGCA 58.546 50.000 30.48 9.28 31.88 4.26
574 575 3.677190 TTACGTCAAGATCTCGAGAGC 57.323 47.619 22.82 22.82 0.00 4.09
575 576 5.666969 AGATTACGTCAAGATCTCGAGAG 57.333 43.478 21.52 7.18 0.00 3.20
576 577 6.438259 AAAGATTACGTCAAGATCTCGAGA 57.562 37.500 19.19 19.19 30.19 4.04
577 578 8.789881 AATAAAGATTACGTCAAGATCTCGAG 57.210 34.615 5.93 5.93 30.19 4.04
599 600 9.547753 GGAGTAGAAAGCATCTCAAACATAATA 57.452 33.333 0.00 0.00 39.71 0.98
600 601 7.500559 GGGAGTAGAAAGCATCTCAAACATAAT 59.499 37.037 0.00 0.00 39.71 1.28
601 602 6.823689 GGGAGTAGAAAGCATCTCAAACATAA 59.176 38.462 0.00 0.00 39.71 1.90
602 603 6.156949 AGGGAGTAGAAAGCATCTCAAACATA 59.843 38.462 0.00 0.00 39.71 2.29
603 604 5.045286 AGGGAGTAGAAAGCATCTCAAACAT 60.045 40.000 0.00 0.00 39.71 2.71
604 605 4.287067 AGGGAGTAGAAAGCATCTCAAACA 59.713 41.667 0.00 0.00 39.71 2.83
605 606 4.837972 AGGGAGTAGAAAGCATCTCAAAC 58.162 43.478 0.00 0.00 39.71 2.93
606 607 4.780021 AGAGGGAGTAGAAAGCATCTCAAA 59.220 41.667 0.00 0.00 39.71 2.69
607 608 4.161189 CAGAGGGAGTAGAAAGCATCTCAA 59.839 45.833 0.00 0.00 39.71 3.02
608 609 3.703556 CAGAGGGAGTAGAAAGCATCTCA 59.296 47.826 0.00 0.00 39.71 3.27
609 610 3.704061 ACAGAGGGAGTAGAAAGCATCTC 59.296 47.826 0.00 0.00 39.71 2.75
610 611 3.718723 ACAGAGGGAGTAGAAAGCATCT 58.281 45.455 0.00 0.00 42.48 2.90
611 612 5.599999 TTACAGAGGGAGTAGAAAGCATC 57.400 43.478 0.00 0.00 0.00 3.91
612 613 6.567602 ATTTACAGAGGGAGTAGAAAGCAT 57.432 37.500 0.00 0.00 0.00 3.79
613 614 6.374417 AATTTACAGAGGGAGTAGAAAGCA 57.626 37.500 0.00 0.00 0.00 3.91
614 615 8.966069 ATTAATTTACAGAGGGAGTAGAAAGC 57.034 34.615 0.00 0.00 0.00 3.51
673 674 9.788889 CCCTCCGTAAATTAATATAAGAGGTTT 57.211 33.333 15.09 0.00 0.00 3.27
674 675 9.162733 TCCCTCCGTAAATTAATATAAGAGGTT 57.837 33.333 15.09 0.00 0.00 3.50
675 676 8.731591 TCCCTCCGTAAATTAATATAAGAGGT 57.268 34.615 15.09 0.00 0.00 3.85
676 677 8.813951 ACTCCCTCCGTAAATTAATATAAGAGG 58.186 37.037 11.68 11.68 0.00 3.69
682 683 8.591940 GGAAGTACTCCCTCCGTAAATTAATAT 58.408 37.037 0.00 0.00 38.44 1.28
683 684 7.255590 CGGAAGTACTCCCTCCGTAAATTAATA 60.256 40.741 21.34 0.00 41.87 0.98
684 685 6.462067 CGGAAGTACTCCCTCCGTAAATTAAT 60.462 42.308 21.34 0.00 41.87 1.40
685 686 5.163519 CGGAAGTACTCCCTCCGTAAATTAA 60.164 44.000 21.34 0.00 41.87 1.40
686 687 4.339247 CGGAAGTACTCCCTCCGTAAATTA 59.661 45.833 21.34 0.00 41.87 1.40
687 688 3.131755 CGGAAGTACTCCCTCCGTAAATT 59.868 47.826 21.34 0.00 41.87 1.82
688 689 2.692041 CGGAAGTACTCCCTCCGTAAAT 59.308 50.000 21.34 0.00 41.87 1.40
689 690 2.094675 CGGAAGTACTCCCTCCGTAAA 58.905 52.381 21.34 0.00 41.87 2.01
690 691 1.281867 TCGGAAGTACTCCCTCCGTAA 59.718 52.381 26.02 11.54 41.87 3.18
691 692 0.911769 TCGGAAGTACTCCCTCCGTA 59.088 55.000 26.02 14.77 41.87 4.02
692 693 0.258194 ATCGGAAGTACTCCCTCCGT 59.742 55.000 26.02 15.19 41.87 4.69
693 694 0.669077 CATCGGAAGTACTCCCTCCG 59.331 60.000 22.94 22.94 41.87 4.63
694 695 2.068834 TCATCGGAAGTACTCCCTCC 57.931 55.000 0.00 0.00 41.87 4.30
695 696 3.025262 AGTTCATCGGAAGTACTCCCTC 58.975 50.000 0.00 0.00 41.87 4.30
696 697 3.103080 AGTTCATCGGAAGTACTCCCT 57.897 47.619 0.00 0.00 41.87 4.20
697 698 3.889520 AAGTTCATCGGAAGTACTCCC 57.110 47.619 0.00 0.00 41.87 4.30
698 699 8.937634 TTATAAAAGTTCATCGGAAGTACTCC 57.062 34.615 0.00 0.00 41.40 3.85
703 704 9.543783 GACCTATTATAAAAGTTCATCGGAAGT 57.456 33.333 0.00 0.00 38.32 3.01
704 705 9.765795 AGACCTATTATAAAAGTTCATCGGAAG 57.234 33.333 0.00 0.00 32.62 3.46
705 706 9.542462 CAGACCTATTATAAAAGTTCATCGGAA 57.458 33.333 0.00 0.00 0.00 4.30
706 707 8.920174 TCAGACCTATTATAAAAGTTCATCGGA 58.080 33.333 0.00 0.00 0.00 4.55
707 708 9.712305 ATCAGACCTATTATAAAAGTTCATCGG 57.288 33.333 0.00 0.00 0.00 4.18
752 753 5.971763 ACCTAGCATATACTAGCATCTTGC 58.028 41.667 4.62 3.61 45.46 4.01
753 754 8.187480 CAGTACCTAGCATATACTAGCATCTTG 58.813 40.741 4.62 0.00 38.68 3.02
754 755 8.110271 TCAGTACCTAGCATATACTAGCATCTT 58.890 37.037 4.62 0.00 38.68 2.40
755 756 7.554835 GTCAGTACCTAGCATATACTAGCATCT 59.445 40.741 4.62 0.57 38.68 2.90
756 757 7.466185 CGTCAGTACCTAGCATATACTAGCATC 60.466 44.444 4.62 0.00 38.68 3.91
757 758 6.316640 CGTCAGTACCTAGCATATACTAGCAT 59.683 42.308 4.62 0.00 38.68 3.79
758 759 5.642491 CGTCAGTACCTAGCATATACTAGCA 59.358 44.000 4.62 0.00 38.68 3.49
759 760 5.447548 GCGTCAGTACCTAGCATATACTAGC 60.448 48.000 4.62 0.00 38.68 3.42
760 761 5.875910 AGCGTCAGTACCTAGCATATACTAG 59.124 44.000 3.27 3.27 39.54 2.57
761 762 5.642491 CAGCGTCAGTACCTAGCATATACTA 59.358 44.000 0.00 0.00 0.00 1.82
762 763 4.456222 CAGCGTCAGTACCTAGCATATACT 59.544 45.833 0.00 0.00 0.00 2.12
763 764 4.724303 CAGCGTCAGTACCTAGCATATAC 58.276 47.826 0.00 0.00 0.00 1.47
764 765 3.190744 GCAGCGTCAGTACCTAGCATATA 59.809 47.826 0.00 0.00 0.00 0.86
771 772 2.036733 AGTTTTGCAGCGTCAGTACCTA 59.963 45.455 0.00 0.00 0.00 3.08
774 775 1.597663 ACAGTTTTGCAGCGTCAGTAC 59.402 47.619 0.00 0.00 0.00 2.73
776 777 1.948104 TACAGTTTTGCAGCGTCAGT 58.052 45.000 0.00 0.00 0.00 3.41
784 785 5.912396 CGTCAGCTATTTTTACAGTTTTGCA 59.088 36.000 0.00 0.00 0.00 4.08
815 816 9.993881 GTCATCGAACAAGTTAAATCATTTTTG 57.006 29.630 0.00 0.00 0.00 2.44
827 830 5.122396 GCTCCTATTTGTCATCGAACAAGTT 59.878 40.000 3.70 0.00 40.08 2.66
890 894 3.443099 AAAAGCTGTCTTTGTTGCCTC 57.557 42.857 0.00 0.00 41.40 4.70
946 969 1.341531 ACTAGTGGTGATCTATGCGGC 59.658 52.381 0.00 0.00 0.00 6.53
948 971 2.887783 AGGACTAGTGGTGATCTATGCG 59.112 50.000 0.00 0.00 0.00 4.73
953 976 1.273267 TGCCAGGACTAGTGGTGATCT 60.273 52.381 0.00 0.00 37.40 2.75
954 977 1.195115 TGCCAGGACTAGTGGTGATC 58.805 55.000 0.00 0.00 37.40 2.92
955 978 1.765314 GATGCCAGGACTAGTGGTGAT 59.235 52.381 0.00 0.00 37.40 3.06
956 979 1.195115 GATGCCAGGACTAGTGGTGA 58.805 55.000 0.00 0.00 37.40 4.02
957 980 0.179000 GGATGCCAGGACTAGTGGTG 59.821 60.000 0.00 0.00 37.40 4.17
958 981 0.252696 TGGATGCCAGGACTAGTGGT 60.253 55.000 0.00 0.00 37.40 4.16
959 982 2.607811 TGGATGCCAGGACTAGTGG 58.392 57.895 0.00 0.00 38.21 4.00
969 992 3.286694 GGGGAGCAACTGGATGCCA 62.287 63.158 4.38 0.00 46.61 4.92
971 994 2.825836 CGGGGAGCAACTGGATGC 60.826 66.667 0.07 0.07 46.78 3.91
1114 1143 3.007973 GCCTCAGGTCGTCCAGGAC 62.008 68.421 9.92 9.92 35.89 3.85
1282 1311 4.565652 GGAGGAAGTCAAATGAGCTGGTTA 60.566 45.833 0.00 0.00 0.00 2.85
1286 1315 2.026449 AGGGAGGAAGTCAAATGAGCTG 60.026 50.000 0.00 0.00 0.00 4.24
1366 1395 8.919145 ACAAAAACTAATTGGTGGACTGAATTA 58.081 29.630 0.00 0.00 32.02 1.40
1400 1429 1.801178 GGCTCACAACACTCACTAAGC 59.199 52.381 0.00 0.00 0.00 3.09
1413 1442 4.383444 CCAGATCAAATCTAGTGGCTCACA 60.383 45.833 7.86 0.00 37.58 3.58
1443 1472 3.062042 ACCGAACTGAATTAACCGACAC 58.938 45.455 0.00 0.00 0.00 3.67
1448 1477 4.320870 TCAGGAACCGAACTGAATTAACC 58.679 43.478 0.00 0.00 40.51 2.85
1465 1494 5.951148 TGGTGATGCAGAAATTAATTCAGGA 59.049 36.000 0.10 0.00 40.72 3.86
1467 1496 7.762615 ACATTGGTGATGCAGAAATTAATTCAG 59.237 33.333 0.10 0.00 38.70 3.02
1474 1503 4.992319 CACAACATTGGTGATGCAGAAATT 59.008 37.500 9.09 0.00 39.47 1.82
1490 1519 2.936919 TCACTCCTTCAGCACAACAT 57.063 45.000 0.00 0.00 0.00 2.71
1651 1680 0.251653 TCAGTGAACCGGCTACCTCT 60.252 55.000 0.00 0.00 0.00 3.69
1667 1696 7.983307 AGCTAGCTCATAAGAAAACAAATCAG 58.017 34.615 12.68 0.00 0.00 2.90
1685 1714 3.922171 AACAGAGCCAATTAGCTAGCT 57.078 42.857 23.12 23.12 45.15 3.32
1686 1715 4.396166 TGAAAACAGAGCCAATTAGCTAGC 59.604 41.667 6.62 6.62 45.15 3.42
1687 1716 5.877012 TCTGAAAACAGAGCCAATTAGCTAG 59.123 40.000 0.00 0.00 45.15 3.42
1688 1717 5.804639 TCTGAAAACAGAGCCAATTAGCTA 58.195 37.500 0.00 0.00 45.15 3.32
1720 1749 7.989416 TTTTCCGGATCAGTGTAGTATTTTT 57.011 32.000 4.15 0.00 0.00 1.94
1722 1751 9.326413 CTAATTTTCCGGATCAGTGTAGTATTT 57.674 33.333 4.15 0.00 0.00 1.40
1723 1752 7.441458 GCTAATTTTCCGGATCAGTGTAGTATT 59.559 37.037 4.15 0.00 0.00 1.89
1724 1753 6.929606 GCTAATTTTCCGGATCAGTGTAGTAT 59.070 38.462 4.15 0.00 0.00 2.12
1726 1755 5.116882 GCTAATTTTCCGGATCAGTGTAGT 58.883 41.667 4.15 0.00 0.00 2.73
1727 1756 5.116180 TGCTAATTTTCCGGATCAGTGTAG 58.884 41.667 4.15 4.09 0.00 2.74
1728 1757 5.092554 TGCTAATTTTCCGGATCAGTGTA 57.907 39.130 4.15 0.00 0.00 2.90
1729 1758 3.950397 TGCTAATTTTCCGGATCAGTGT 58.050 40.909 4.15 0.00 0.00 3.55
1730 1759 6.808008 ATATGCTAATTTTCCGGATCAGTG 57.192 37.500 4.15 0.00 0.00 3.66
1731 1760 7.106239 CCTATATGCTAATTTTCCGGATCAGT 58.894 38.462 4.15 0.00 0.00 3.41
1732 1761 7.106239 ACCTATATGCTAATTTTCCGGATCAG 58.894 38.462 4.15 0.00 0.00 2.90
1734 1763 7.606456 TGAACCTATATGCTAATTTTCCGGATC 59.394 37.037 4.15 0.00 0.00 3.36
1737 1766 7.687941 ATGAACCTATATGCTAATTTTCCGG 57.312 36.000 0.00 0.00 0.00 5.14
1741 1770 8.971073 GCCCATATGAACCTATATGCTAATTTT 58.029 33.333 3.65 0.00 38.91 1.82
1742 1771 8.115384 TGCCCATATGAACCTATATGCTAATTT 58.885 33.333 3.65 0.00 38.91 1.82
1756 1785 2.551459 GACATGCTCTGCCCATATGAAC 59.449 50.000 3.65 0.00 0.00 3.18
1758 1787 2.052468 AGACATGCTCTGCCCATATGA 58.948 47.619 3.65 0.00 0.00 2.15
1766 1795 2.745821 TGAAATGTCAGACATGCTCTGC 59.254 45.455 17.11 0.39 45.64 4.26
1777 1812 5.428496 ACAATCACAGTGTGAAATGTCAG 57.572 39.130 28.69 17.56 45.96 3.51
1786 1821 1.154599 GCGCGACAATCACAGTGTG 60.155 57.895 17.53 17.53 34.45 3.82
1793 1828 0.512518 CTGTTCAAGCGCGACAATCA 59.487 50.000 12.10 0.00 0.00 2.57
1842 1877 3.127030 CCTCCTTGGCTACAAAATTCGAC 59.873 47.826 0.00 0.00 35.89 4.20
1857 1892 0.108662 GAAAATTGCCGCCCTCCTTG 60.109 55.000 0.00 0.00 0.00 3.61
1866 1901 1.541147 TCCTGAAGCTGAAAATTGCCG 59.459 47.619 0.00 0.00 0.00 5.69
1869 1904 3.582780 GCCTTCCTGAAGCTGAAAATTG 58.417 45.455 1.25 0.00 37.11 2.32
1878 1913 0.958822 TTTTTCGGCCTTCCTGAAGC 59.041 50.000 0.00 0.00 37.11 3.86
1931 1966 3.126831 CCAGAATCAATAGACGTCTGCC 58.873 50.000 28.12 8.58 37.68 4.85
1938 1973 6.709397 TGATCAGAATGCCAGAATCAATAGAC 59.291 38.462 0.00 0.00 34.76 2.59
1947 1982 3.009363 TCCACTTGATCAGAATGCCAGAA 59.991 43.478 0.00 0.00 34.76 3.02
2049 2087 8.276252 TGCAACTCTTGGTATTAGAAATAACC 57.724 34.615 0.00 0.00 0.00 2.85
2081 2119 4.541973 ATTGGTTTGAGCAGGGAATTTC 57.458 40.909 0.00 0.00 0.00 2.17
2199 2237 4.115199 ACATCCTTCCCGGCCTGC 62.115 66.667 0.00 0.00 0.00 4.85
2310 2348 8.830915 TGAAGCTCTTCCCCTATATAATCTAG 57.169 38.462 7.12 0.00 38.77 2.43
2316 2354 5.045578 GGCAATGAAGCTCTTCCCCTATATA 60.046 44.000 7.12 0.00 38.77 0.86
2317 2355 4.263683 GGCAATGAAGCTCTTCCCCTATAT 60.264 45.833 7.12 0.00 38.77 0.86
2318 2356 3.073062 GGCAATGAAGCTCTTCCCCTATA 59.927 47.826 7.12 0.00 38.77 1.31
2319 2357 2.158549 GGCAATGAAGCTCTTCCCCTAT 60.159 50.000 7.12 0.00 38.77 2.57
2320 2358 1.212935 GGCAATGAAGCTCTTCCCCTA 59.787 52.381 7.12 0.00 38.77 3.53
2371 2409 2.825532 ACTGAGCAAAGTTTGTTGTGGT 59.174 40.909 16.70 6.60 0.00 4.16
2373 2411 7.639039 TCTTATACTGAGCAAAGTTTGTTGTG 58.361 34.615 16.70 8.24 0.00 3.33
2377 2415 8.682710 TGTTTTCTTATACTGAGCAAAGTTTGT 58.317 29.630 16.70 4.16 0.00 2.83
2400 2438 9.612620 GCGCATAATTAGCTTATAAGATTTGTT 57.387 29.630 16.85 8.10 0.00 2.83
2401 2439 8.783093 TGCGCATAATTAGCTTATAAGATTTGT 58.217 29.630 16.85 0.00 0.00 2.83
2402 2440 9.611284 TTGCGCATAATTAGCTTATAAGATTTG 57.389 29.630 12.75 8.95 0.00 2.32
2404 2442 9.831737 CTTTGCGCATAATTAGCTTATAAGATT 57.168 29.630 12.75 9.43 0.00 2.40
2405 2443 7.965107 GCTTTGCGCATAATTAGCTTATAAGAT 59.035 33.333 12.75 12.70 38.92 2.40
2406 2444 7.041440 TGCTTTGCGCATAATTAGCTTATAAGA 60.041 33.333 12.75 0.00 45.47 2.10
2407 2445 7.077605 TGCTTTGCGCATAATTAGCTTATAAG 58.922 34.615 12.75 8.16 45.47 1.73
2408 2446 6.964908 TGCTTTGCGCATAATTAGCTTATAA 58.035 32.000 12.75 0.00 45.47 0.98
2409 2447 6.552859 TGCTTTGCGCATAATTAGCTTATA 57.447 33.333 12.75 0.00 45.47 0.98
2410 2448 5.437289 TGCTTTGCGCATAATTAGCTTAT 57.563 34.783 12.75 0.00 45.47 1.73
2411 2449 4.891627 TGCTTTGCGCATAATTAGCTTA 57.108 36.364 12.75 0.00 45.47 3.09
2412 2450 3.781079 TGCTTTGCGCATAATTAGCTT 57.219 38.095 12.75 0.00 45.47 3.74
2423 2461 0.735978 GTACCCCATTTGCTTTGCGC 60.736 55.000 0.00 0.00 39.77 6.09
2424 2462 0.108851 GGTACCCCATTTGCTTTGCG 60.109 55.000 0.00 0.00 0.00 4.85
2439 2477 7.015877 TCAGTATCCACTATGGTAATTGGGTAC 59.984 40.741 2.23 2.23 43.45 3.34
2554 2612 5.938125 GGTATCATTCACCTGTTAAGTGTGT 59.062 40.000 0.00 0.00 36.58 3.72
2569 2627 2.622064 AGGCTCCAACGGTATCATTC 57.378 50.000 0.00 0.00 0.00 2.67
2593 2651 0.886490 CATCCCAATAGTGCGCTCCC 60.886 60.000 9.73 0.00 0.00 4.30
2611 2669 0.392863 CCGCAACCATCACATCCTCA 60.393 55.000 0.00 0.00 0.00 3.86
2668 2726 1.189524 TTGGGATGGACTCGGTTCGT 61.190 55.000 0.00 0.00 0.00 3.85
2674 2732 0.462759 GGAGCTTTGGGATGGACTCG 60.463 60.000 0.00 0.00 0.00 4.18
2735 2793 8.822805 ACTGGAGTAAATTAAAGATGTGACCTA 58.177 33.333 0.00 0.00 0.00 3.08
2738 2796 9.654663 AGTACTGGAGTAAATTAAAGATGTGAC 57.345 33.333 0.00 0.00 31.52 3.67
2759 2817 7.066284 GCATGTATCCAATTTCAGTTCAGTACT 59.934 37.037 0.00 0.00 37.68 2.73
2776 2835 2.297701 ACGTTGGAATGGCATGTATCC 58.702 47.619 9.34 9.34 0.00 2.59
2780 2843 0.038343 GCAACGTTGGAATGGCATGT 60.038 50.000 28.33 0.00 0.00 3.21
2818 2881 6.426646 AGACTTCATTTTACTCCACTCACT 57.573 37.500 0.00 0.00 0.00 3.41
2859 2925 2.607499 TGTGGGTTGATTGATGCCTTT 58.393 42.857 0.00 0.00 0.00 3.11
2860 2926 2.307496 TGTGGGTTGATTGATGCCTT 57.693 45.000 0.00 0.00 0.00 4.35
2872 2938 7.014988 ACAAAAATTTATGGCTATGTGGGTT 57.985 32.000 0.00 0.00 0.00 4.11
2890 2956 8.498054 TCCAGCAATGACAAATTTTACAAAAA 57.502 26.923 0.00 0.00 0.00 1.94
2897 2964 9.211485 CTCTTATTTCCAGCAATGACAAATTTT 57.789 29.630 0.00 0.00 0.00 1.82
2902 2969 7.707624 ATTCTCTTATTTCCAGCAATGACAA 57.292 32.000 0.00 0.00 0.00 3.18
2913 2996 6.920210 GTGCTGGCATTTATTCTCTTATTTCC 59.080 38.462 0.00 0.00 0.00 3.13
2933 3016 5.186996 ACTTTAACCAACTCAATGTGCTG 57.813 39.130 0.00 0.00 0.00 4.41
2934 3017 5.852282 AACTTTAACCAACTCAATGTGCT 57.148 34.783 0.00 0.00 0.00 4.40
2935 3018 5.810074 ACAAACTTTAACCAACTCAATGTGC 59.190 36.000 0.00 0.00 0.00 4.57
2936 3019 8.918961 TTACAAACTTTAACCAACTCAATGTG 57.081 30.769 0.00 0.00 0.00 3.21
2937 3020 9.930693 TTTTACAAACTTTAACCAACTCAATGT 57.069 25.926 0.00 0.00 0.00 2.71
2940 3023 9.930693 ACATTTTACAAACTTTAACCAACTCAA 57.069 25.926 0.00 0.00 0.00 3.02
2941 3024 9.360093 CACATTTTACAAACTTTAACCAACTCA 57.640 29.630 0.00 0.00 0.00 3.41
2942 3025 9.361315 ACACATTTTACAAACTTTAACCAACTC 57.639 29.630 0.00 0.00 0.00 3.01
2943 3026 9.361315 GACACATTTTACAAACTTTAACCAACT 57.639 29.630 0.00 0.00 0.00 3.16
2944 3027 9.141400 TGACACATTTTACAAACTTTAACCAAC 57.859 29.630 0.00 0.00 0.00 3.77
2945 3028 9.877178 ATGACACATTTTACAAACTTTAACCAA 57.123 25.926 0.00 0.00 0.00 3.67
2946 3029 9.877178 AATGACACATTTTACAAACTTTAACCA 57.123 25.926 0.00 0.00 0.00 3.67
2973 3056 9.971922 GCTGCCATTTATTCTATTATTTCAAGT 57.028 29.630 0.00 0.00 0.00 3.16
2974 3057 9.970395 TGCTGCCATTTATTCTATTATTTCAAG 57.030 29.630 0.00 0.00 0.00 3.02
2975 3058 9.748708 GTGCTGCCATTTATTCTATTATTTCAA 57.251 29.630 0.00 0.00 0.00 2.69
2976 3059 8.911965 TGTGCTGCCATTTATTCTATTATTTCA 58.088 29.630 0.00 0.00 0.00 2.69
2977 3060 9.185192 GTGTGCTGCCATTTATTCTATTATTTC 57.815 33.333 0.00 0.00 0.00 2.17
2978 3061 8.917088 AGTGTGCTGCCATTTATTCTATTATTT 58.083 29.630 0.00 0.00 0.00 1.40
2979 3062 8.355169 CAGTGTGCTGCCATTTATTCTATTATT 58.645 33.333 0.00 0.00 35.77 1.40
2980 3063 7.720957 TCAGTGTGCTGCCATTTATTCTATTAT 59.279 33.333 0.00 0.00 42.29 1.28
2981 3064 7.053498 TCAGTGTGCTGCCATTTATTCTATTA 58.947 34.615 0.00 0.00 42.29 0.98
2982 3065 5.887598 TCAGTGTGCTGCCATTTATTCTATT 59.112 36.000 0.00 0.00 42.29 1.73
2983 3066 5.439721 TCAGTGTGCTGCCATTTATTCTAT 58.560 37.500 0.00 0.00 42.29 1.98
2984 3067 4.842574 TCAGTGTGCTGCCATTTATTCTA 58.157 39.130 0.00 0.00 42.29 2.10
2985 3068 3.689347 TCAGTGTGCTGCCATTTATTCT 58.311 40.909 0.00 0.00 42.29 2.40
2986 3069 3.441572 ACTCAGTGTGCTGCCATTTATTC 59.558 43.478 0.00 0.00 42.29 1.75
2987 3070 3.424703 ACTCAGTGTGCTGCCATTTATT 58.575 40.909 0.00 0.00 42.29 1.40
2988 3071 3.077484 ACTCAGTGTGCTGCCATTTAT 57.923 42.857 0.00 0.00 42.29 1.40
2989 3072 2.553602 CAACTCAGTGTGCTGCCATTTA 59.446 45.455 0.00 0.00 42.29 1.40
2990 3073 1.338973 CAACTCAGTGTGCTGCCATTT 59.661 47.619 0.00 0.00 42.29 2.32
2991 3074 0.956633 CAACTCAGTGTGCTGCCATT 59.043 50.000 0.00 0.00 42.29 3.16
2992 3075 0.892358 CCAACTCAGTGTGCTGCCAT 60.892 55.000 0.00 0.00 42.29 4.40
2993 3076 1.526686 CCAACTCAGTGTGCTGCCA 60.527 57.895 0.00 0.00 42.29 4.92
2994 3077 1.103398 AACCAACTCAGTGTGCTGCC 61.103 55.000 0.00 0.00 42.29 4.85
2995 3078 1.593196 TAACCAACTCAGTGTGCTGC 58.407 50.000 0.00 0.00 42.29 5.25
3021 3104 8.671921 ACTCAGTGTTGATTATCTGCATTTTAG 58.328 33.333 0.00 0.00 31.68 1.85
3157 3240 9.214957 CATGCCATCAAAATAAGCATATGAATT 57.785 29.630 6.97 2.86 42.04 2.17
3158 3241 8.372459 ACATGCCATCAAAATAAGCATATGAAT 58.628 29.630 6.97 0.00 42.04 2.57
3222 3312 0.753262 CTCCAAGGTACATCCCGGAG 59.247 60.000 0.73 6.30 44.59 4.63
3249 3339 3.628646 CTTTCCCAGCACCCTCCGG 62.629 68.421 0.00 0.00 0.00 5.14
3263 3353 2.094494 TCAGACTCGTGAGCCATCTTTC 60.094 50.000 0.00 0.00 0.00 2.62
3264 3354 1.895798 TCAGACTCGTGAGCCATCTTT 59.104 47.619 0.00 0.00 0.00 2.52
3276 3366 4.673441 AGTGACCGAAAATATCAGACTCG 58.327 43.478 0.00 0.00 0.00 4.18
3286 3376 0.788391 GCGAACGAGTGACCGAAAAT 59.212 50.000 0.00 0.00 0.00 1.82
3288 3378 0.937699 CAGCGAACGAGTGACCGAAA 60.938 55.000 0.00 0.00 0.00 3.46
3360 3451 5.163612 GGAAAAGGATACATTTGGACTCTGC 60.164 44.000 0.00 0.00 37.67 4.26
3390 3481 5.312895 TCAGCTTAGAGTGGCACAAAATTA 58.687 37.500 21.41 1.66 44.16 1.40
3403 3494 3.059597 CGTGTTTGTGGTTCAGCTTAGAG 60.060 47.826 0.00 0.00 0.00 2.43
3417 3508 4.565564 GCGGAGTTCTATAATCGTGTTTGT 59.434 41.667 0.00 0.00 0.00 2.83
3525 3616 7.333528 TGGCCATATATGACTGAAAAAGTTC 57.666 36.000 14.54 0.00 40.07 3.01
3694 3796 2.816087 TCTTCTGAAGAATGCCAGCAAC 59.184 45.455 17.32 0.00 33.83 4.17
3876 3978 1.227292 GATCCCCGAGCCGTCTTTC 60.227 63.158 0.00 0.00 0.00 2.62
3891 3993 1.154225 CAAAAGTGCGGCACCGATC 60.154 57.895 28.14 4.35 42.83 3.69
3900 4002 2.732094 GCAGCTGCCAAAAGTGCG 60.732 61.111 28.76 0.00 34.31 5.34
3915 4017 4.239304 CTGCTGCATATTTTGAGTTTGCA 58.761 39.130 1.31 0.00 40.73 4.08
4026 4130 3.510388 TGTTCCTGAGCACGAGAATAG 57.490 47.619 0.00 0.00 0.00 1.73
4055 4159 8.085296 CCTGTGTATCTACCTCTCAATATGTTC 58.915 40.741 0.00 0.00 0.00 3.18
4062 4166 6.019656 AGATCCTGTGTATCTACCTCTCAA 57.980 41.667 0.00 0.00 31.88 3.02
4080 4187 1.760029 GGGAGTCACTGAGGAAGATCC 59.240 57.143 0.00 0.00 36.58 3.36
4088 4195 2.693069 GTGATGTTGGGAGTCACTGAG 58.307 52.381 0.00 0.00 39.24 3.35
4098 4205 1.905215 AGACTGAGGAGTGATGTTGGG 59.095 52.381 0.00 0.00 30.16 4.12
4099 4206 2.564504 TGAGACTGAGGAGTGATGTTGG 59.435 50.000 0.00 0.00 30.16 3.77
4207 4351 9.478019 CAACGACACTCTTCATTTAAATATGAC 57.522 33.333 0.00 0.00 34.41 3.06
4317 4462 9.939424 ACTCTTATATTAGTTTACAGAGGGAGT 57.061 33.333 0.00 0.00 32.21 3.85
4319 4464 9.710818 ACACTCTTATATTAGTTTACAGAGGGA 57.289 33.333 2.59 0.00 34.50 4.20
4337 4482 9.298250 ACTGAAGTAGTGATCTAAACACTCTTA 57.702 33.333 0.00 0.00 45.58 2.10
4338 4483 8.184304 ACTGAAGTAGTGATCTAAACACTCTT 57.816 34.615 0.00 0.00 45.58 2.85
4339 4484 7.768807 ACTGAAGTAGTGATCTAAACACTCT 57.231 36.000 0.00 0.00 45.58 3.24
4353 4498 7.448777 TGAGAGTGTTTAGATCACTGAAGTAGT 59.551 37.037 3.29 0.00 44.68 2.73
4354 4499 7.753132 GTGAGAGTGTTTAGATCACTGAAGTAG 59.247 40.741 3.29 0.00 44.68 2.57
4355 4500 7.230712 TGTGAGAGTGTTTAGATCACTGAAGTA 59.769 37.037 3.29 0.00 44.68 2.24
4356 4501 6.040955 TGTGAGAGTGTTTAGATCACTGAAGT 59.959 38.462 3.29 0.00 44.68 3.01
4357 4502 6.450545 TGTGAGAGTGTTTAGATCACTGAAG 58.549 40.000 3.29 0.00 44.68 3.02
4358 4503 6.405278 TGTGAGAGTGTTTAGATCACTGAA 57.595 37.500 3.29 0.00 44.68 3.02
4359 4504 6.596309 ATGTGAGAGTGTTTAGATCACTGA 57.404 37.500 3.29 0.00 44.68 3.41
4360 4505 8.031864 ACTAATGTGAGAGTGTTTAGATCACTG 58.968 37.037 3.29 0.00 44.68 3.66
4361 4506 8.128322 ACTAATGTGAGAGTGTTTAGATCACT 57.872 34.615 0.00 0.00 46.86 3.41
4362 4507 8.764524 AACTAATGTGAGAGTGTTTAGATCAC 57.235 34.615 0.00 0.00 40.49 3.06
4365 4510 9.355215 CGTAAACTAATGTGAGAGTGTTTAGAT 57.645 33.333 0.00 0.00 32.78 1.98
4366 4511 7.811236 CCGTAAACTAATGTGAGAGTGTTTAGA 59.189 37.037 0.00 0.00 32.78 2.10
4367 4512 7.811236 TCCGTAAACTAATGTGAGAGTGTTTAG 59.189 37.037 0.00 0.00 32.78 1.85
4368 4513 7.660112 TCCGTAAACTAATGTGAGAGTGTTTA 58.340 34.615 0.00 0.00 0.00 2.01
4369 4514 6.518493 TCCGTAAACTAATGTGAGAGTGTTT 58.482 36.000 0.00 0.00 0.00 2.83
4370 4515 6.092955 TCCGTAAACTAATGTGAGAGTGTT 57.907 37.500 0.00 0.00 0.00 3.32
4371 4516 5.336531 CCTCCGTAAACTAATGTGAGAGTGT 60.337 44.000 0.00 0.00 0.00 3.55
4372 4517 5.103000 CCTCCGTAAACTAATGTGAGAGTG 58.897 45.833 0.00 0.00 0.00 3.51
4373 4518 4.159879 CCCTCCGTAAACTAATGTGAGAGT 59.840 45.833 0.00 0.00 0.00 3.24
4374 4519 4.401519 TCCCTCCGTAAACTAATGTGAGAG 59.598 45.833 0.00 0.00 0.00 3.20
4375 4520 4.346730 TCCCTCCGTAAACTAATGTGAGA 58.653 43.478 0.00 0.00 0.00 3.27
4376 4521 4.159879 ACTCCCTCCGTAAACTAATGTGAG 59.840 45.833 0.00 0.00 0.00 3.51
4377 4522 4.091549 ACTCCCTCCGTAAACTAATGTGA 58.908 43.478 0.00 0.00 0.00 3.58
4378 4523 4.467198 ACTCCCTCCGTAAACTAATGTG 57.533 45.455 0.00 0.00 0.00 3.21
4379 4524 5.895534 TCATACTCCCTCCGTAAACTAATGT 59.104 40.000 0.00 0.00 0.00 2.71
4380 4525 6.401047 TCATACTCCCTCCGTAAACTAATG 57.599 41.667 0.00 0.00 0.00 1.90
4381 4526 5.010820 GCTCATACTCCCTCCGTAAACTAAT 59.989 44.000 0.00 0.00 0.00 1.73
4382 4527 4.340381 GCTCATACTCCCTCCGTAAACTAA 59.660 45.833 0.00 0.00 0.00 2.24
4383 4528 3.887716 GCTCATACTCCCTCCGTAAACTA 59.112 47.826 0.00 0.00 0.00 2.24
4384 4529 2.694109 GCTCATACTCCCTCCGTAAACT 59.306 50.000 0.00 0.00 0.00 2.66
4385 4530 2.694109 AGCTCATACTCCCTCCGTAAAC 59.306 50.000 0.00 0.00 0.00 2.01
4386 4531 3.028094 AGCTCATACTCCCTCCGTAAA 57.972 47.619 0.00 0.00 0.00 2.01
4387 4532 2.750141 AGCTCATACTCCCTCCGTAA 57.250 50.000 0.00 0.00 0.00 3.18
4388 4533 3.752665 CTTAGCTCATACTCCCTCCGTA 58.247 50.000 0.00 0.00 0.00 4.02
4389 4534 2.588620 CTTAGCTCATACTCCCTCCGT 58.411 52.381 0.00 0.00 0.00 4.69
4390 4535 1.271102 GCTTAGCTCATACTCCCTCCG 59.729 57.143 0.00 0.00 0.00 4.63
4391 4536 2.320781 TGCTTAGCTCATACTCCCTCC 58.679 52.381 5.60 0.00 0.00 4.30
4392 4537 5.163457 GGATATGCTTAGCTCATACTCCCTC 60.163 48.000 5.60 0.00 30.16 4.30
4393 4538 4.714308 GGATATGCTTAGCTCATACTCCCT 59.286 45.833 5.60 0.00 30.16 4.20
4394 4539 4.467795 TGGATATGCTTAGCTCATACTCCC 59.532 45.833 5.60 0.00 31.06 4.30
4395 4540 5.186797 AGTGGATATGCTTAGCTCATACTCC 59.813 44.000 5.60 2.98 31.81 3.85
4396 4541 6.279513 AGTGGATATGCTTAGCTCATACTC 57.720 41.667 5.60 0.77 30.16 2.59
4397 4542 6.678568 AAGTGGATATGCTTAGCTCATACT 57.321 37.500 5.60 1.17 30.16 2.12
4398 4543 9.522804 GTATAAGTGGATATGCTTAGCTCATAC 57.477 37.037 5.60 0.00 31.70 2.39
4454 4749 6.822667 ATTACTGTGCATGACAAAAGATCA 57.177 33.333 0.00 0.00 32.80 2.92
4490 4796 6.595772 TCAACAAAAACATTGTGGTATTGC 57.404 33.333 0.00 0.00 32.22 3.56
4576 4887 5.584442 TGTCAATGATGTCATTATTGCTGC 58.416 37.500 20.28 14.49 44.10 5.25
4578 4889 7.147966 ACACATGTCAATGATGTCATTATTGCT 60.148 33.333 20.28 8.80 44.10 3.91
4634 4950 7.755591 AGTGATACAGAAAGCACAACATTATG 58.244 34.615 0.00 0.00 33.85 1.90
4635 4951 7.201556 CGAGTGATACAGAAAGCACAACATTAT 60.202 37.037 0.00 0.00 33.85 1.28
4636 4952 6.090763 CGAGTGATACAGAAAGCACAACATTA 59.909 38.462 0.00 0.00 33.85 1.90
4643 4959 2.924290 GTCCGAGTGATACAGAAAGCAC 59.076 50.000 0.00 0.00 0.00 4.40
4723 5039 5.061179 CCGAGAAATTTGGGATTACGGTAT 58.939 41.667 0.00 0.00 34.39 2.73
4813 5129 1.140161 CTTGCGGTGATGGCATTGG 59.860 57.895 0.00 0.00 40.62 3.16
4814 5130 1.885157 ACTTGCGGTGATGGCATTG 59.115 52.632 0.00 0.00 40.62 2.82
4824 5140 0.107410 TTCACCTTGTCACTTGCGGT 60.107 50.000 0.00 0.00 0.00 5.68
4841 5157 1.133025 CAATGCACCGGGATTCAGTTC 59.867 52.381 6.32 0.00 32.14 3.01
4916 5232 1.002544 GAGAGGTTTGAGGACACCCAG 59.997 57.143 0.00 0.00 32.92 4.45


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.