Multiple sequence alignment - TraesCS2B01G012200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G012200 chr2B 100.000 6889 0 0 1 6889 6205169 6198281 0.000000e+00 12722
1 TraesCS2B01G012200 chr2B 81.328 3192 507 63 642 3812 6215372 6212249 0.000000e+00 2510
2 TraesCS2B01G012200 chr2B 81.685 3014 468 58 618 3597 6186407 6183444 0.000000e+00 2431
3 TraesCS2B01G012200 chr2B 96.190 105 4 0 4674 4778 764831177 764831281 9.190000e-39 172
4 TraesCS2B01G012200 chr2B 97.030 101 3 0 4670 4770 418953564 418953664 3.300000e-38 171
5 TraesCS2B01G012200 chr2B 97.000 100 3 0 4672 4771 457144391 457144490 1.190000e-37 169
6 TraesCS2B01G012200 chr2A 91.127 4339 308 40 368 4675 3854197 3849905 0.000000e+00 5808
7 TraesCS2B01G012200 chr2A 88.744 2141 210 23 4767 6889 3849908 3847781 0.000000e+00 2590
8 TraesCS2B01G012200 chr2A 81.309 3055 482 64 623 3649 3839467 3836474 0.000000e+00 2396
9 TraesCS2B01G012200 chr2A 81.210 1719 267 43 2106 3812 3909057 3907383 0.000000e+00 1334
10 TraesCS2B01G012200 chr2A 83.367 1467 209 27 642 2100 3919179 3917740 0.000000e+00 1325
11 TraesCS2B01G012200 chr2A 83.939 1046 159 9 4857 5901 3835347 3834310 0.000000e+00 992
12 TraesCS2B01G012200 chr2A 83.588 1048 159 12 4857 5900 3906421 3905383 0.000000e+00 970
13 TraesCS2B01G012200 chr2A 89.508 305 21 3 24 326 3854491 3854196 6.520000e-100 375
14 TraesCS2B01G012200 chr2A 87.789 303 36 1 4370 4671 3835714 3835412 3.060000e-93 353
15 TraesCS2B01G012200 chr2A 86.926 283 37 0 4384 4666 3906793 3906511 1.110000e-82 318
16 TraesCS2B01G012200 chr2D 81.579 3192 497 64 642 3812 5299731 5296610 0.000000e+00 2553
17 TraesCS2B01G012200 chr2D 81.697 3065 478 57 618 3649 5285330 5282316 0.000000e+00 2475
18 TraesCS2B01G012200 chr2D 83.222 1049 163 11 4857 5900 5295653 5294613 0.000000e+00 950
19 TraesCS2B01G012200 chr2D 85.812 733 62 15 6194 6889 5294111 5293384 0.000000e+00 739
20 TraesCS2B01G012200 chr2D 86.486 296 40 0 4371 4666 5281547 5281252 6.660000e-85 326
21 TraesCS2B01G012200 chr2D 86.572 283 38 0 4384 4666 5296025 5295743 5.190000e-81 313
22 TraesCS2B01G012200 chr3A 81.250 3056 464 72 642 3643 479134540 479131540 0.000000e+00 2368
23 TraesCS2B01G012200 chr3A 83.668 1047 152 13 4861 5901 479130356 479129323 0.000000e+00 968
24 TraesCS2B01G012200 chr3A 83.046 348 51 6 4339 4681 479130853 479130509 6.710000e-80 309
25 TraesCS2B01G012200 chr3D 81.074 3054 473 69 642 3643 359678362 359675362 0.000000e+00 2340
26 TraesCS2B01G012200 chr3D 83.794 1049 149 14 4861 5901 359674257 359673222 0.000000e+00 976
27 TraesCS2B01G012200 chr3B 82.613 2082 305 37 1588 3643 465932820 465930770 0.000000e+00 1786
28 TraesCS2B01G012200 chr3B 83.898 1093 151 17 4816 5901 465929709 465928635 0.000000e+00 1020
29 TraesCS2B01G012200 chr3B 79.369 887 153 20 642 1518 465933808 465932942 1.280000e-166 597
30 TraesCS2B01G012200 chr3B 98.000 100 2 0 4671 4770 766128279 766128180 2.550000e-39 174
31 TraesCS2B01G012200 chr3B 97.959 98 2 0 4674 4771 240275331 240275234 3.300000e-38 171
32 TraesCS2B01G012200 chr1B 95.283 106 5 0 4666 4771 328139790 328139685 1.190000e-37 169
33 TraesCS2B01G012200 chr6D 96.970 99 3 0 4673 4771 466538229 466538131 4.270000e-37 167
34 TraesCS2B01G012200 chr6B 96.117 103 3 1 4669 4771 651412733 651412632 4.270000e-37 167
35 TraesCS2B01G012200 chr5B 96.078 102 4 0 4669 4770 79345743 79345642 4.270000e-37 167


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G012200 chr2B 6198281 6205169 6888 True 12722.000000 12722 100.000000 1 6889 1 chr2B.!!$R2 6888
1 TraesCS2B01G012200 chr2B 6212249 6215372 3123 True 2510.000000 2510 81.328000 642 3812 1 chr2B.!!$R3 3170
2 TraesCS2B01G012200 chr2B 6183444 6186407 2963 True 2431.000000 2431 81.685000 618 3597 1 chr2B.!!$R1 2979
3 TraesCS2B01G012200 chr2A 3847781 3854491 6710 True 2924.333333 5808 89.793000 24 6889 3 chr2A.!!$R3 6865
4 TraesCS2B01G012200 chr2A 3917740 3919179 1439 True 1325.000000 1325 83.367000 642 2100 1 chr2A.!!$R1 1458
5 TraesCS2B01G012200 chr2A 3834310 3839467 5157 True 1247.000000 2396 84.345667 623 5901 3 chr2A.!!$R2 5278
6 TraesCS2B01G012200 chr2A 3905383 3909057 3674 True 874.000000 1334 83.908000 2106 5900 3 chr2A.!!$R4 3794
7 TraesCS2B01G012200 chr2D 5281252 5285330 4078 True 1400.500000 2475 84.091500 618 4666 2 chr2D.!!$R1 4048
8 TraesCS2B01G012200 chr2D 5293384 5299731 6347 True 1138.750000 2553 84.296250 642 6889 4 chr2D.!!$R2 6247
9 TraesCS2B01G012200 chr3A 479129323 479134540 5217 True 1215.000000 2368 82.654667 642 5901 3 chr3A.!!$R1 5259
10 TraesCS2B01G012200 chr3D 359673222 359678362 5140 True 1658.000000 2340 82.434000 642 5901 2 chr3D.!!$R1 5259
11 TraesCS2B01G012200 chr3B 465928635 465933808 5173 True 1134.333333 1786 81.960000 642 5901 3 chr3B.!!$R3 5259

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
168 171 0.108329 CGGTAAACGCAGGGAGACAT 60.108 55.000 0.00 0.00 34.82 3.06 F
1789 1916 0.037160 TCAAGGCCCGGGAAACTAAC 59.963 55.000 29.31 3.51 0.00 2.34 F
2401 2538 0.316689 GTACGCTTGTGGTTGCACAC 60.317 55.000 0.61 0.61 41.68 3.82 F
2752 2905 0.955919 GCAGTAGCGGGCACTCTTTT 60.956 55.000 0.00 0.00 0.00 2.27 F
2793 2946 1.202639 TGGCACAGTTGAATCGTCTGT 60.203 47.619 4.76 4.76 42.14 3.41 F
4427 4762 0.607489 AAGTGGCCACAGATGCAGTC 60.607 55.000 36.39 6.60 0.00 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1892 2019 0.179048 CACCAGCCTGCGGATCATAA 60.179 55.000 0.0 0.0 0.00 1.90 R
2689 2839 0.455633 GCTTCATTGACAGGCTTGCG 60.456 55.000 0.0 0.0 0.00 4.85 R
4178 4446 1.463444 CCACTTTCCTTTCGCCTTACG 59.537 52.381 0.0 0.0 45.62 3.18 R
4180 4448 3.071892 TCTTCCACTTTCCTTTCGCCTTA 59.928 43.478 0.0 0.0 0.00 2.69 R
4756 5176 1.133730 ACCGTCCTACTCTCTCCATCC 60.134 57.143 0.0 0.0 0.00 3.51 R
6354 7063 0.178990 GGAGACATTGGCCCCATACC 60.179 60.000 0.0 0.0 0.00 2.73 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 2.574369 AGTATTTCGGGTCCACCAATCA 59.426 45.455 0.00 0.00 40.22 2.57
70 73 6.531594 GCAAGCAGAAGGAATTTATTTACCAC 59.468 38.462 0.00 0.00 0.00 4.16
71 74 6.436843 AGCAGAAGGAATTTATTTACCACG 57.563 37.500 0.00 0.00 0.00 4.94
88 91 1.211181 ACGCGCATCATCACATCTCG 61.211 55.000 5.73 0.00 0.00 4.04
96 99 4.023792 GCATCATCACATCTCGGCATAAAA 60.024 41.667 0.00 0.00 0.00 1.52
105 108 8.988934 TCACATCTCGGCATAAAATAATAGTTC 58.011 33.333 0.00 0.00 0.00 3.01
106 109 8.230486 CACATCTCGGCATAAAATAATAGTTCC 58.770 37.037 0.00 0.00 0.00 3.62
141 144 4.241590 CACATGTTGCATGGTTGTAACT 57.758 40.909 12.87 0.00 45.45 2.24
142 145 4.619973 CACATGTTGCATGGTTGTAACTT 58.380 39.130 12.87 0.38 45.45 2.66
144 147 4.619973 CATGTTGCATGGTTGTAACTTGT 58.380 39.130 11.80 0.00 45.45 3.16
145 148 5.767269 CATGTTGCATGGTTGTAACTTGTA 58.233 37.500 11.80 0.00 45.45 2.41
146 149 5.836821 TGTTGCATGGTTGTAACTTGTAA 57.163 34.783 8.11 0.00 45.45 2.41
167 170 1.290955 CGGTAAACGCAGGGAGACA 59.709 57.895 0.00 0.00 34.82 3.41
168 171 0.108329 CGGTAAACGCAGGGAGACAT 60.108 55.000 0.00 0.00 34.82 3.06
206 209 1.086696 TTCGCTTATGCAGGCTGTTC 58.913 50.000 17.16 0.20 39.64 3.18
282 285 4.437930 GCATCAGCATACTTTGTCAACCTC 60.438 45.833 0.00 0.00 41.58 3.85
288 291 5.645497 AGCATACTTTGTCAACCTCTTCATC 59.355 40.000 0.00 0.00 0.00 2.92
290 293 6.402983 GCATACTTTGTCAACCTCTTCATCTG 60.403 42.308 0.00 0.00 0.00 2.90
311 314 0.951558 GTTTGCACCTTGGTCGATGT 59.048 50.000 0.00 0.00 0.00 3.06
317 320 0.824759 ACCTTGGTCGATGTAGAGCC 59.175 55.000 0.00 0.00 37.81 4.70
319 322 2.307768 CCTTGGTCGATGTAGAGCCTA 58.692 52.381 0.00 0.00 37.81 3.93
323 326 1.546476 GGTCGATGTAGAGCCTATGGG 59.454 57.143 0.00 0.00 32.92 4.00
324 327 2.240279 GTCGATGTAGAGCCTATGGGT 58.760 52.381 0.00 0.00 35.46 4.51
325 328 2.628657 GTCGATGTAGAGCCTATGGGTT 59.371 50.000 0.00 0.00 31.55 4.11
326 329 3.069729 GTCGATGTAGAGCCTATGGGTTT 59.930 47.826 0.00 0.00 31.55 3.27
327 330 3.709653 TCGATGTAGAGCCTATGGGTTTT 59.290 43.478 0.00 0.00 31.55 2.43
328 331 4.897076 TCGATGTAGAGCCTATGGGTTTTA 59.103 41.667 0.00 0.00 31.55 1.52
329 332 5.542635 TCGATGTAGAGCCTATGGGTTTTAT 59.457 40.000 0.00 0.00 31.55 1.40
330 333 6.722590 TCGATGTAGAGCCTATGGGTTTTATA 59.277 38.462 0.00 0.00 31.55 0.98
331 334 7.399191 TCGATGTAGAGCCTATGGGTTTTATAT 59.601 37.037 0.00 0.00 31.55 0.86
332 335 7.707035 CGATGTAGAGCCTATGGGTTTTATATC 59.293 40.741 8.42 8.42 32.37 1.63
333 336 7.253905 TGTAGAGCCTATGGGTTTTATATCC 57.746 40.000 0.00 0.00 31.55 2.59
334 337 7.023120 TGTAGAGCCTATGGGTTTTATATCCT 58.977 38.462 0.00 0.00 31.55 3.24
335 338 6.628644 AGAGCCTATGGGTTTTATATCCTC 57.371 41.667 0.00 0.00 31.55 3.71
336 339 5.489278 AGAGCCTATGGGTTTTATATCCTCC 59.511 44.000 0.00 0.00 31.55 4.30
337 340 5.424973 AGCCTATGGGTTTTATATCCTCCT 58.575 41.667 0.00 0.00 34.45 3.69
338 341 6.581122 AGCCTATGGGTTTTATATCCTCCTA 58.419 40.000 0.00 0.00 34.45 2.94
339 342 7.206976 AGCCTATGGGTTTTATATCCTCCTAT 58.793 38.462 0.00 0.00 34.45 2.57
340 343 7.688971 AGCCTATGGGTTTTATATCCTCCTATT 59.311 37.037 0.00 0.00 34.45 1.73
341 344 7.993758 GCCTATGGGTTTTATATCCTCCTATTC 59.006 40.741 0.00 0.00 34.45 1.75
342 345 9.057911 CCTATGGGTTTTATATCCTCCTATTCA 57.942 37.037 0.00 0.00 0.00 2.57
344 347 8.757307 ATGGGTTTTATATCCTCCTATTCAGA 57.243 34.615 0.00 0.00 0.00 3.27
345 348 8.575736 TGGGTTTTATATCCTCCTATTCAGAA 57.424 34.615 0.00 0.00 0.00 3.02
346 349 9.009675 TGGGTTTTATATCCTCCTATTCAGAAA 57.990 33.333 0.00 0.00 0.00 2.52
347 350 9.862149 GGGTTTTATATCCTCCTATTCAGAAAA 57.138 33.333 0.00 0.00 0.00 2.29
354 357 9.753674 ATATCCTCCTATTCAGAAAACAAAACA 57.246 29.630 0.00 0.00 0.00 2.83
355 358 8.655935 ATCCTCCTATTCAGAAAACAAAACAT 57.344 30.769 0.00 0.00 0.00 2.71
356 359 9.753674 ATCCTCCTATTCAGAAAACAAAACATA 57.246 29.630 0.00 0.00 0.00 2.29
357 360 9.581289 TCCTCCTATTCAGAAAACAAAACATAA 57.419 29.630 0.00 0.00 0.00 1.90
387 390 5.499004 TTTTAACCACCTGCTGAGATACT 57.501 39.130 0.00 0.00 0.00 2.12
389 392 5.854010 TTAACCACCTGCTGAGATACTAG 57.146 43.478 0.00 0.00 0.00 2.57
390 393 2.035632 ACCACCTGCTGAGATACTAGC 58.964 52.381 0.00 0.00 40.29 3.42
393 396 2.035704 CACCTGCTGAGATACTAGCCAG 59.964 54.545 0.00 0.00 39.15 4.85
411 414 3.569701 GCCAGATCTTGACCTTGTTTGAA 59.430 43.478 0.00 0.00 0.00 2.69
414 417 6.739565 GCCAGATCTTGACCTTGTTTGAAAAT 60.740 38.462 0.00 0.00 0.00 1.82
416 419 7.428020 CAGATCTTGACCTTGTTTGAAAATCA 58.572 34.615 0.00 0.00 0.00 2.57
417 420 7.594015 CAGATCTTGACCTTGTTTGAAAATCAG 59.406 37.037 0.00 0.00 0.00 2.90
418 421 6.773976 TCTTGACCTTGTTTGAAAATCAGT 57.226 33.333 0.00 0.00 0.00 3.41
419 422 7.169158 TCTTGACCTTGTTTGAAAATCAGTT 57.831 32.000 0.00 0.00 0.00 3.16
420 423 8.287439 TCTTGACCTTGTTTGAAAATCAGTTA 57.713 30.769 0.00 0.00 0.00 2.24
421 424 8.744652 TCTTGACCTTGTTTGAAAATCAGTTAA 58.255 29.630 0.00 0.00 0.00 2.01
422 425 9.533253 CTTGACCTTGTTTGAAAATCAGTTAAT 57.467 29.630 0.00 0.00 0.00 1.40
436 439 8.792830 AAATCAGTTAATGCACATACTAGTGT 57.207 30.769 5.39 0.00 41.52 3.55
467 470 4.234574 TGCAAGTAGTTATCGATATGGCG 58.765 43.478 5.84 0.00 0.00 5.69
468 471 4.022676 TGCAAGTAGTTATCGATATGGCGA 60.023 41.667 5.84 0.00 45.22 5.54
472 475 7.360101 GCAAGTAGTTATCGATATGGCGAAAAT 60.360 37.037 5.84 0.00 44.22 1.82
474 477 8.240883 AGTAGTTATCGATATGGCGAAAATTC 57.759 34.615 5.84 0.00 44.22 2.17
505 516 9.780413 CTAAATTTCTTGTCCAAAGAGAATAGC 57.220 33.333 0.00 0.00 30.26 2.97
510 521 7.765695 TCTTGTCCAAAGAGAATAGCAAAAT 57.234 32.000 0.00 0.00 0.00 1.82
515 526 7.652909 TGTCCAAAGAGAATAGCAAAATTGTTG 59.347 33.333 0.00 0.00 0.00 3.33
554 568 6.229936 ACATTTCAAATGGAAGATGGATGG 57.770 37.500 14.70 0.00 36.72 3.51
555 569 5.722923 ACATTTCAAATGGAAGATGGATGGT 59.277 36.000 14.70 0.00 36.72 3.55
630 647 3.686016 ACCATTGGTCATGTCAAGGTAC 58.314 45.455 1.37 0.00 30.05 3.34
638 655 4.331717 GGTCATGTCAAGGTACAATAACCG 59.668 45.833 0.00 0.00 44.77 4.44
693 711 2.436646 CGGTGAAAGGCAGGCGAT 60.437 61.111 0.00 0.00 0.00 4.58
694 712 2.753966 CGGTGAAAGGCAGGCGATG 61.754 63.158 0.00 0.00 0.00 3.84
769 787 4.009370 TGACATACAAATGACAACCGGA 57.991 40.909 9.46 0.00 35.34 5.14
869 889 4.806247 AGTCAAATGTAGAGCGCATAAGAC 59.194 41.667 11.47 5.81 33.91 3.01
882 907 6.258160 AGCGCATAAGACAAATTGTATTCAC 58.742 36.000 11.47 0.53 33.44 3.18
886 911 9.935682 CGCATAAGACAAATTGTATTCACTATT 57.064 29.630 9.40 0.00 33.44 1.73
890 915 7.849804 AGACAAATTGTATTCACTATTCGCT 57.150 32.000 0.00 0.00 30.26 4.93
891 916 8.942338 AGACAAATTGTATTCACTATTCGCTA 57.058 30.769 0.00 0.00 30.26 4.26
892 917 9.547753 AGACAAATTGTATTCACTATTCGCTAT 57.452 29.630 0.00 0.00 30.26 2.97
975 1008 6.602009 AGTTCTAACAACTTGTGGCTACTTTT 59.398 34.615 0.64 0.00 0.00 2.27
993 1026 6.144078 ACTTTTGTTGGTGGTTTCACTATC 57.856 37.500 0.00 0.00 43.17 2.08
1071 1104 1.943340 GTACTTGCTGCAGGAATAGCC 59.057 52.381 21.68 6.24 0.00 3.93
1095 1128 6.346758 CCACAAAAATGATGACCAAAATCACG 60.347 38.462 0.00 0.00 36.89 4.35
1168 1201 6.687604 ACAATTGGAGCCATAAAAACAGTAC 58.312 36.000 10.83 0.00 0.00 2.73
1179 1212 7.581476 CCATAAAAACAGTACGTTCAGTTCAT 58.419 34.615 3.57 0.00 36.59 2.57
1184 1217 7.781548 AAACAGTACGTTCAGTTCATAAAGT 57.218 32.000 3.57 0.00 36.59 2.66
1219 1253 7.921786 TTTATCCAATGGCTAGTATGCATAC 57.078 36.000 26.26 26.26 34.04 2.39
1251 1307 4.628074 TGTGTGCTCACTAAGTTACCTTC 58.372 43.478 18.85 0.00 44.14 3.46
1274 1330 4.575885 TGGCTATATCCGCAAAATAGGTC 58.424 43.478 0.14 0.00 0.00 3.85
1298 1354 3.524095 TCTTTCAATGGGGAGAAGCAA 57.476 42.857 0.00 0.00 0.00 3.91
1397 1453 3.392882 CATGGGTTCTGTTTTCTTTGCC 58.607 45.455 0.00 0.00 0.00 4.52
1442 1498 4.202524 GCCATATGGTATGGTGGGAAGTTA 60.203 45.833 22.79 0.00 41.17 2.24
1502 1558 4.100189 ACTGTCCTGTTAGCTATCATGACC 59.900 45.833 25.10 14.59 31.56 4.02
1520 1576 2.743928 GGGGCAGCGTGAGTTCTG 60.744 66.667 0.00 0.00 0.00 3.02
1546 1602 9.308318 GTCTCTTACCTTGAACTAGAATTCATC 57.692 37.037 8.44 1.29 38.37 2.92
1592 1719 5.308014 ACAATACTGACTGTTTGATGCAGA 58.692 37.500 0.00 0.00 37.40 4.26
1705 1832 8.833734 ACCAGATATTGATCCTGATGACAATAT 58.166 33.333 0.00 0.00 43.73 1.28
1778 1905 0.843984 TTAGCTACCCATCAAGGCCC 59.156 55.000 0.00 0.00 35.39 5.80
1789 1916 0.037160 TCAAGGCCCGGGAAACTAAC 59.963 55.000 29.31 3.51 0.00 2.34
1816 1943 2.892374 TGGATTCTCACTACATGTGCG 58.108 47.619 9.11 1.74 45.81 5.34
1868 1995 1.150536 TGGGAGTGGCAAGTCAACC 59.849 57.895 0.00 0.00 0.00 3.77
1869 1996 1.150536 GGGAGTGGCAAGTCAACCA 59.849 57.895 0.00 0.00 0.00 3.67
1892 2019 7.181125 ACCATGGTTAGTCTTGTAGAGAGATTT 59.819 37.037 13.00 0.00 34.31 2.17
1967 2094 4.623932 ACACCTTGATTCAGTAAGAGCA 57.376 40.909 0.00 0.00 0.00 4.26
2075 2202 3.070734 TGGATGAGATTAAGAGAGCTGCC 59.929 47.826 0.00 0.00 0.00 4.85
2104 2231 3.424697 GCTAATGCGGCAAATTTTGTTGG 60.425 43.478 6.82 0.00 0.00 3.77
2131 2258 2.297315 TGCCCAATGTGCGTGAAAATAA 59.703 40.909 0.00 0.00 0.00 1.40
2193 2330 9.939047 GCTAATATTTATTTGTATCTCGTGTCG 57.061 33.333 0.00 0.00 0.00 4.35
2201 2338 2.106338 TGTATCTCGTGTCGGGGGTATA 59.894 50.000 0.00 0.00 0.00 1.47
2236 2373 1.670811 CAACGTGGTGCTCAACTTTCT 59.329 47.619 0.00 0.00 0.00 2.52
2300 2437 7.875554 TCATTAAAAACCCCAAAATACTCTTGC 59.124 33.333 0.00 0.00 0.00 4.01
2401 2538 0.316689 GTACGCTTGTGGTTGCACAC 60.317 55.000 0.61 0.61 41.68 3.82
2414 2551 2.613133 GTTGCACACCGTTTAAGTACCA 59.387 45.455 0.00 0.00 0.00 3.25
2484 2622 2.238646 AGCAAGGTCGGGATTACATTCA 59.761 45.455 0.00 0.00 0.00 2.57
2648 2798 5.489792 ACTACAAGAAAGCCATGAAGAGA 57.510 39.130 0.00 0.00 0.00 3.10
2678 2828 4.911053 AGATCGTCGATTGTCTACTCAAC 58.089 43.478 9.52 0.00 0.00 3.18
2689 2839 4.553323 TGTCTACTCAACGGTCTAAAAGC 58.447 43.478 0.00 0.00 0.00 3.51
2721 2874 4.740205 GTCAATGAAGCGATCGATTAGTGA 59.260 41.667 19.85 18.09 0.00 3.41
2752 2905 0.955919 GCAGTAGCGGGCACTCTTTT 60.956 55.000 0.00 0.00 0.00 2.27
2756 2909 2.236395 AGTAGCGGGCACTCTTTTACAT 59.764 45.455 0.00 0.00 0.00 2.29
2758 2911 3.343941 AGCGGGCACTCTTTTACATTA 57.656 42.857 0.00 0.00 0.00 1.90
2763 2916 3.945921 GGGCACTCTTTTACATTACCCTC 59.054 47.826 0.00 0.00 31.84 4.30
2765 2918 4.566907 GGCACTCTTTTACATTACCCTCCA 60.567 45.833 0.00 0.00 0.00 3.86
2770 2923 6.049955 TCTTTTACATTACCCTCCAGACTG 57.950 41.667 0.00 0.00 0.00 3.51
2793 2946 1.202639 TGGCACAGTTGAATCGTCTGT 60.203 47.619 4.76 4.76 42.14 3.41
2829 2982 7.102346 ACACATAAGGAGAATCAGAAAGAGTG 58.898 38.462 0.00 0.00 36.25 3.51
2835 2988 6.008960 AGGAGAATCAGAAAGAGTGCAATTT 58.991 36.000 0.00 0.00 36.25 1.82
2843 2996 5.987347 CAGAAAGAGTGCAATTTTGATGGTT 59.013 36.000 0.00 0.00 0.00 3.67
2914 3073 5.665459 CCAGAGGTACCTATTCTTCTGTTG 58.335 45.833 16.29 1.79 36.50 3.33
3003 3162 5.591877 CCATTAAAGCTTTCTATGAGCCACT 59.408 40.000 24.84 0.84 41.03 4.00
3058 3217 4.752101 GGTCTGATATGTGTTGTCATAGGC 59.248 45.833 0.00 0.00 34.43 3.93
3237 3396 8.572185 AGCTTTTCTCTTGGTTAATTTCTTCTC 58.428 33.333 0.00 0.00 0.00 2.87
3255 3414 3.791320 TCTCCCTCTAGGTTGTGTGAAT 58.209 45.455 0.00 0.00 36.75 2.57
3257 3416 5.338632 TCTCCCTCTAGGTTGTGTGAATTA 58.661 41.667 0.00 0.00 36.75 1.40
3373 3538 7.989947 AGTGGGAGATAACTTGTCCTTAATA 57.010 36.000 0.00 0.00 0.00 0.98
3538 3703 7.982354 AGTCAAGATGCTAAGGTAATCAGTTAC 59.018 37.037 0.00 0.00 39.57 2.50
3623 3790 9.787532 CTAAATGTTACACCTTGTAATTCCATG 57.212 33.333 2.26 0.00 43.74 3.66
3639 3806 7.656707 AATTCCATGTATGTTGTTTCTTTGC 57.343 32.000 0.00 0.00 0.00 3.68
3668 3836 5.410439 AGGCAATGTCTTCAAAATGCAATTC 59.590 36.000 0.00 0.00 33.67 2.17
3720 3904 8.742554 ATAATTTGTACGAAAAGCCAAGAAAG 57.257 30.769 0.00 0.00 0.00 2.62
3722 3906 2.946329 TGTACGAAAAGCCAAGAAAGCA 59.054 40.909 0.00 0.00 0.00 3.91
3726 3910 5.195001 ACGAAAAGCCAAGAAAGCAATAA 57.805 34.783 0.00 0.00 0.00 1.40
3731 3915 8.323140 CGAAAAGCCAAGAAAGCAATAATATTG 58.677 33.333 8.55 8.55 0.00 1.90
3742 3926 7.880160 AAGCAATAATATTGTAGAAGTGCCA 57.120 32.000 13.77 0.00 0.00 4.92
3744 3928 9.573166 AAGCAATAATATTGTAGAAGTGCCATA 57.427 29.630 13.77 0.00 0.00 2.74
3771 3956 9.864034 CGAGAAATTTTACGCATATGATTTAGT 57.136 29.630 6.97 0.58 0.00 2.24
3872 4078 7.778470 AGCTAAATAAAGTAGAGCATGTCAC 57.222 36.000 0.00 0.00 35.55 3.67
3878 4084 4.833478 AAGTAGAGCATGTCACCTTGAT 57.167 40.909 0.00 0.00 0.00 2.57
3882 4088 1.662629 GAGCATGTCACCTTGATGTCG 59.337 52.381 0.00 0.00 0.00 4.35
3885 4091 2.159653 GCATGTCACCTTGATGTCGTTC 60.160 50.000 0.00 0.00 0.00 3.95
3888 4094 2.364002 TGTCACCTTGATGTCGTTCAGA 59.636 45.455 0.00 0.00 0.00 3.27
3930 4145 9.736023 GTTACCCTTGCTTTCTATGAATTATTG 57.264 33.333 0.00 0.00 0.00 1.90
4003 4228 4.728772 TGGACATCCAAGTTTCATCTTGT 58.271 39.130 0.00 0.00 44.35 3.16
4024 4249 3.859961 GTCTAGTGTCATGATGGTGTTCG 59.140 47.826 0.00 0.00 0.00 3.95
4074 4305 1.555075 TGGCTCCATAGACACACCTTC 59.445 52.381 0.00 0.00 35.10 3.46
4146 4412 4.651503 TGGGGAGCTTTGTTGTTCAATTAA 59.348 37.500 0.00 0.00 35.84 1.40
4427 4762 0.607489 AAGTGGCCACAGATGCAGTC 60.607 55.000 36.39 6.60 0.00 3.51
4462 4797 5.108385 ACCATAGCTTCTTTTTGTTCACG 57.892 39.130 0.00 0.00 0.00 4.35
4634 4969 2.159043 TGTGCGCCAAGGAAAATCAAAA 60.159 40.909 4.18 0.00 0.00 2.44
4646 4981 7.967890 AGGAAAATCAAAATTTGGTGACATC 57.032 32.000 5.83 0.00 42.32 3.06
4680 5100 5.965922 GCAAATGCATTTTTAGTACTCCCT 58.034 37.500 21.95 0.00 41.59 4.20
4682 5102 6.972901 GCAAATGCATTTTTAGTACTCCCTAC 59.027 38.462 21.95 0.00 41.59 3.18
4683 5103 6.920569 AATGCATTTTTAGTACTCCCTACG 57.079 37.500 5.99 0.00 0.00 3.51
4684 5104 5.410355 TGCATTTTTAGTACTCCCTACGT 57.590 39.130 0.00 0.00 0.00 3.57
4685 5105 5.413499 TGCATTTTTAGTACTCCCTACGTC 58.587 41.667 0.00 0.00 0.00 4.34
4686 5106 4.807834 GCATTTTTAGTACTCCCTACGTCC 59.192 45.833 0.00 0.00 0.00 4.79
4687 5107 5.354767 CATTTTTAGTACTCCCTACGTCCC 58.645 45.833 0.00 0.00 0.00 4.46
4688 5108 3.737559 TTTAGTACTCCCTACGTCCCA 57.262 47.619 0.00 0.00 0.00 4.37
4689 5109 3.737559 TTAGTACTCCCTACGTCCCAA 57.262 47.619 0.00 0.00 0.00 4.12
4690 5110 2.610438 AGTACTCCCTACGTCCCAAA 57.390 50.000 0.00 0.00 0.00 3.28
4691 5111 2.893424 AGTACTCCCTACGTCCCAAAA 58.107 47.619 0.00 0.00 0.00 2.44
4693 5113 4.613437 AGTACTCCCTACGTCCCAAAATA 58.387 43.478 0.00 0.00 0.00 1.40
4694 5114 5.025453 AGTACTCCCTACGTCCCAAAATAA 58.975 41.667 0.00 0.00 0.00 1.40
4695 5115 4.482952 ACTCCCTACGTCCCAAAATAAG 57.517 45.455 0.00 0.00 0.00 1.73
4697 5117 4.189231 CTCCCTACGTCCCAAAATAAGTG 58.811 47.826 0.00 0.00 0.00 3.16
4699 5119 3.937079 CCCTACGTCCCAAAATAAGTGTC 59.063 47.826 0.00 0.00 0.00 3.67
4700 5120 4.323257 CCCTACGTCCCAAAATAAGTGTCT 60.323 45.833 0.00 0.00 0.00 3.41
4701 5121 5.243207 CCTACGTCCCAAAATAAGTGTCTT 58.757 41.667 0.00 0.00 0.00 3.01
4703 5123 4.710324 ACGTCCCAAAATAAGTGTCTTGA 58.290 39.130 0.00 0.00 0.00 3.02
4704 5124 4.755123 ACGTCCCAAAATAAGTGTCTTGAG 59.245 41.667 0.00 0.00 0.00 3.02
4705 5125 4.378459 CGTCCCAAAATAAGTGTCTTGAGC 60.378 45.833 0.00 0.00 0.00 4.26
4706 5126 4.762251 GTCCCAAAATAAGTGTCTTGAGCT 59.238 41.667 0.00 0.00 0.00 4.09
4707 5127 5.241728 GTCCCAAAATAAGTGTCTTGAGCTT 59.758 40.000 0.00 0.00 0.00 3.74
4708 5128 6.430000 GTCCCAAAATAAGTGTCTTGAGCTTA 59.570 38.462 0.00 0.00 0.00 3.09
4709 5129 6.655003 TCCCAAAATAAGTGTCTTGAGCTTAG 59.345 38.462 0.00 0.00 0.00 2.18
4710 5130 6.431234 CCCAAAATAAGTGTCTTGAGCTTAGT 59.569 38.462 0.00 0.00 0.00 2.24
4711 5131 7.606456 CCCAAAATAAGTGTCTTGAGCTTAGTA 59.394 37.037 0.00 0.00 0.00 1.82
4712 5132 8.443937 CCAAAATAAGTGTCTTGAGCTTAGTAC 58.556 37.037 0.00 0.00 0.00 2.73
4713 5133 8.988934 CAAAATAAGTGTCTTGAGCTTAGTACA 58.011 33.333 0.00 0.00 0.00 2.90
4714 5134 9.555727 AAAATAAGTGTCTTGAGCTTAGTACAA 57.444 29.630 0.00 0.00 0.00 2.41
4715 5135 9.555727 AAATAAGTGTCTTGAGCTTAGTACAAA 57.444 29.630 0.00 0.00 0.00 2.83
4716 5136 9.726438 AATAAGTGTCTTGAGCTTAGTACAAAT 57.274 29.630 0.00 0.00 0.00 2.32
4717 5137 9.726438 ATAAGTGTCTTGAGCTTAGTACAAATT 57.274 29.630 0.00 0.00 0.00 1.82
4718 5138 8.451908 AAGTGTCTTGAGCTTAGTACAAATTT 57.548 30.769 0.00 0.00 0.00 1.82
4719 5139 7.865707 AGTGTCTTGAGCTTAGTACAAATTTG 58.134 34.615 16.67 16.67 0.00 2.32
4720 5140 7.499232 AGTGTCTTGAGCTTAGTACAAATTTGT 59.501 33.333 25.99 25.99 44.86 2.83
4721 5141 8.770828 GTGTCTTGAGCTTAGTACAAATTTGTA 58.229 33.333 23.91 23.91 42.35 2.41
4745 5165 7.148355 ACTAGAGCTAGTACAAAGTTGAGAC 57.852 40.000 8.35 0.00 43.98 3.36
4746 5166 6.715718 ACTAGAGCTAGTACAAAGTTGAGACA 59.284 38.462 8.35 0.00 43.98 3.41
4747 5167 5.774630 AGAGCTAGTACAAAGTTGAGACAC 58.225 41.667 0.00 0.00 0.00 3.67
4748 5168 5.536916 AGAGCTAGTACAAAGTTGAGACACT 59.463 40.000 0.00 0.00 0.00 3.55
4749 5169 6.041069 AGAGCTAGTACAAAGTTGAGACACTT 59.959 38.462 0.00 0.00 38.74 3.16
4750 5170 7.230913 AGAGCTAGTACAAAGTTGAGACACTTA 59.769 37.037 0.00 0.00 35.87 2.24
4751 5171 7.897864 AGCTAGTACAAAGTTGAGACACTTAT 58.102 34.615 0.00 0.00 35.87 1.73
4752 5172 8.368668 AGCTAGTACAAAGTTGAGACACTTATT 58.631 33.333 0.00 0.00 35.87 1.40
4753 5173 8.989980 GCTAGTACAAAGTTGAGACACTTATTT 58.010 33.333 0.00 0.00 35.87 1.40
4756 5176 8.621286 AGTACAAAGTTGAGACACTTATTTTGG 58.379 33.333 0.00 0.00 35.87 3.28
4757 5177 6.805713 ACAAAGTTGAGACACTTATTTTGGG 58.194 36.000 0.00 0.00 35.87 4.12
4758 5178 6.605594 ACAAAGTTGAGACACTTATTTTGGGA 59.394 34.615 0.00 0.00 35.87 4.37
4759 5179 7.287696 ACAAAGTTGAGACACTTATTTTGGGAT 59.712 33.333 0.00 0.00 35.87 3.85
4760 5180 6.824305 AGTTGAGACACTTATTTTGGGATG 57.176 37.500 0.00 0.00 0.00 3.51
4761 5181 5.711976 AGTTGAGACACTTATTTTGGGATGG 59.288 40.000 0.00 0.00 0.00 3.51
4762 5182 5.512942 TGAGACACTTATTTTGGGATGGA 57.487 39.130 0.00 0.00 0.00 3.41
4763 5183 5.500234 TGAGACACTTATTTTGGGATGGAG 58.500 41.667 0.00 0.00 0.00 3.86
4764 5184 5.250543 TGAGACACTTATTTTGGGATGGAGA 59.749 40.000 0.00 0.00 0.00 3.71
4765 5185 5.749462 AGACACTTATTTTGGGATGGAGAG 58.251 41.667 0.00 0.00 0.00 3.20
4766 5186 5.488919 AGACACTTATTTTGGGATGGAGAGA 59.511 40.000 0.00 0.00 0.00 3.10
4767 5187 5.749462 ACACTTATTTTGGGATGGAGAGAG 58.251 41.667 0.00 0.00 0.00 3.20
4768 5188 5.251700 ACACTTATTTTGGGATGGAGAGAGT 59.748 40.000 0.00 0.00 0.00 3.24
4769 5189 6.443849 ACACTTATTTTGGGATGGAGAGAGTA 59.556 38.462 0.00 0.00 0.00 2.59
4770 5190 6.989169 CACTTATTTTGGGATGGAGAGAGTAG 59.011 42.308 0.00 0.00 0.00 2.57
4771 5191 6.100424 ACTTATTTTGGGATGGAGAGAGTAGG 59.900 42.308 0.00 0.00 0.00 3.18
4772 5192 3.776731 TTTGGGATGGAGAGAGTAGGA 57.223 47.619 0.00 0.00 0.00 2.94
4773 5193 2.757894 TGGGATGGAGAGAGTAGGAC 57.242 55.000 0.00 0.00 0.00 3.85
4774 5194 1.133761 TGGGATGGAGAGAGTAGGACG 60.134 57.143 0.00 0.00 0.00 4.79
4798 5218 5.940470 GGTTTCTTGCTAAGGATTCTCTTCA 59.060 40.000 0.00 0.00 0.00 3.02
4834 5255 7.801716 TTTCATAATCCCTCCATCTTTAACG 57.198 36.000 0.00 0.00 0.00 3.18
4835 5256 6.494666 TCATAATCCCTCCATCTTTAACGT 57.505 37.500 0.00 0.00 0.00 3.99
4837 5258 2.953466 TCCCTCCATCTTTAACGTCG 57.047 50.000 0.00 0.00 0.00 5.12
4854 5275 3.492011 ACGTCGGTCATAACTTTCACAAC 59.508 43.478 0.00 0.00 0.00 3.32
4855 5276 3.491639 CGTCGGTCATAACTTTCACAACA 59.508 43.478 0.00 0.00 0.00 3.33
4873 5294 7.751732 TCACAACATCATTTCACATAGTAAGC 58.248 34.615 0.00 0.00 0.00 3.09
4964 5385 6.128007 GGTCTCCGATTCAAATAAAGCAAAGA 60.128 38.462 0.00 0.00 0.00 2.52
4965 5386 7.415653 GGTCTCCGATTCAAATAAAGCAAAGAT 60.416 37.037 0.00 0.00 0.00 2.40
5108 5529 2.404559 ACCCAACTCGCCCAGATATTA 58.595 47.619 0.00 0.00 0.00 0.98
5134 5555 4.922206 TCTTCAATGACTTTACCCTGCAT 58.078 39.130 0.00 0.00 0.00 3.96
5141 5562 3.139077 GACTTTACCCTGCATATTCCGG 58.861 50.000 0.00 0.00 0.00 5.14
5142 5563 2.508300 ACTTTACCCTGCATATTCCGGT 59.492 45.455 0.00 0.00 0.00 5.28
5168 5589 5.186992 GGCAAGGTTAATTTACCCACTTCAT 59.813 40.000 9.98 0.00 39.08 2.57
5218 5642 9.341078 TCAACATACATGCATGTAATTAGTCAT 57.659 29.630 36.12 19.84 45.40 3.06
5238 5662 8.794335 AGTCATTTACTTCCTTTATGGTCTTC 57.206 34.615 0.00 0.00 33.35 2.87
5276 5700 1.550976 GTTGGAGAGAGTGGTAGTGGG 59.449 57.143 0.00 0.00 0.00 4.61
5281 5705 3.166679 GAGAGAGTGGTAGTGGGAAGTT 58.833 50.000 0.00 0.00 0.00 2.66
5294 5718 2.743126 TGGGAAGTTAACGGTAATTGCG 59.257 45.455 0.00 0.00 0.00 4.85
5323 5747 7.868792 TGGAGAGATTCTATGATCCTGATTT 57.131 36.000 0.00 0.00 0.00 2.17
5332 5756 3.281727 TGATCCTGATTTAGGCACCAC 57.718 47.619 0.00 0.00 46.87 4.16
5372 5796 7.382218 GTGGGAATCAACAACTTAAACATCAAG 59.618 37.037 0.00 0.00 0.00 3.02
5410 5834 1.372683 GACTGGTGAGCCAAGAGCA 59.627 57.895 0.00 0.00 45.51 4.26
5429 5853 2.486982 GCATGTGCTCTTCAATGACACT 59.513 45.455 0.00 0.00 38.21 3.55
5456 5880 3.564225 GTGCCAACATAGCCTATGGTAAC 59.436 47.826 15.83 5.60 40.47 2.50
5486 5910 3.987745 AGTCAAAGAGGAGGAGCTCATA 58.012 45.455 17.19 0.00 31.08 2.15
5536 5960 4.054671 GAGTTCATATCAAGCCTTCCTCG 58.945 47.826 0.00 0.00 0.00 4.63
5620 6044 0.961753 GCTATTGCAAGGGCCATACC 59.038 55.000 6.18 0.00 40.13 2.73
5687 6111 5.351948 TGGATGTTGAATCTGAACGGATA 57.648 39.130 0.00 0.00 0.00 2.59
5763 6187 1.340248 ACCGCCTATCGACGATCAAAT 59.660 47.619 14.80 0.00 41.67 2.32
5779 6203 6.374053 ACGATCAAATGTGTTGATACCATTGA 59.626 34.615 1.70 0.00 39.08 2.57
5821 6245 3.579335 AGTAGAGAAAGGAAGTCACGC 57.421 47.619 0.00 0.00 0.00 5.34
5834 6258 1.144969 GTCACGCGTCCTTGATGAAA 58.855 50.000 9.86 0.00 0.00 2.69
5835 6259 1.136336 GTCACGCGTCCTTGATGAAAC 60.136 52.381 9.86 0.00 0.00 2.78
5864 6288 2.028112 TGGAGTGTATGCTTCACTGGTC 60.028 50.000 12.13 4.83 44.68 4.02
5901 6327 6.043411 GCGTCATCATAATAACCTAGGATCC 58.957 44.000 17.98 2.48 0.00 3.36
5904 6330 7.761704 CGTCATCATAATAACCTAGGATCCTTG 59.238 40.741 22.03 18.39 0.00 3.61
5905 6331 7.550906 GTCATCATAATAACCTAGGATCCTTGC 59.449 40.741 22.03 0.34 0.00 4.01
5906 6332 7.237471 TCATCATAATAACCTAGGATCCTTGCA 59.763 37.037 22.03 6.23 0.00 4.08
5907 6333 7.387265 TCATAATAACCTAGGATCCTTGCAA 57.613 36.000 22.03 6.22 0.00 4.08
5921 6351 2.484594 CCTTGCAACCGGTTCCAATTTT 60.485 45.455 23.52 0.00 0.00 1.82
5953 6383 8.310382 CACATTTATTGTTTGGGATGACCTTAA 58.690 33.333 0.00 0.00 36.87 1.85
5954 6384 9.045745 ACATTTATTGTTTGGGATGACCTTAAT 57.954 29.630 0.00 0.00 35.94 1.40
5955 6385 9.889128 CATTTATTGTTTGGGATGACCTTAATT 57.111 29.630 0.00 0.00 41.11 1.40
5959 6389 8.893563 ATTGTTTGGGATGACCTTAATTAAGA 57.106 30.769 23.95 7.11 41.11 2.10
5966 6396 6.409810 GGGATGACCTTAATTAAGAGGAGCTT 60.410 42.308 23.95 7.53 37.12 3.74
5967 6397 6.484977 GGATGACCTTAATTAAGAGGAGCTTG 59.515 42.308 23.95 9.01 37.42 4.01
5980 6410 7.430760 AAGAGGAGCTTGAGATGTAAACTAT 57.569 36.000 0.00 0.00 34.93 2.12
5984 6414 8.998277 AGGAGCTTGAGATGTAAACTATAGTA 57.002 34.615 5.65 0.00 0.00 1.82
6052 6482 9.469807 TGTATGCATTTACAACGAAAGATTTTT 57.530 25.926 3.54 0.00 0.00 1.94
6059 6489 8.762149 TTTACAACGAAAGATTTTTCTTCTCG 57.238 30.769 7.10 13.56 40.43 4.04
6118 6549 1.264020 TGTCGATGTGAAAAGCAGTGC 59.736 47.619 7.13 7.13 0.00 4.40
6124 6555 4.143473 CGATGTGAAAAGCAGTGCATTTTC 60.143 41.667 27.74 27.74 42.88 2.29
6125 6556 3.456280 TGTGAAAAGCAGTGCATTTTCC 58.544 40.909 29.39 24.21 42.23 3.13
6133 6571 3.004734 AGCAGTGCATTTTCCTGTTGTAC 59.995 43.478 19.20 0.00 0.00 2.90
6192 6630 9.920826 GTTGTACATGTCATGTATTGTATGAAG 57.079 33.333 24.80 0.00 46.39 3.02
6244 6926 2.851195 TGTTCTGGAAGGTGCTTCTTC 58.149 47.619 9.97 9.97 40.07 2.87
6295 7002 1.938069 AGCCCTTAGGACCTTCCTCTA 59.062 52.381 0.00 0.00 45.66 2.43
6323 7032 5.423610 CCTCTCTCTCCCTCATCTAAACAAA 59.576 44.000 0.00 0.00 0.00 2.83
6331 7040 5.705441 TCCCTCATCTAAACAAATGACACAC 59.295 40.000 0.00 0.00 0.00 3.82
6362 7071 0.548989 TCCACATTTCCGGTATGGGG 59.451 55.000 25.46 25.46 46.03 4.96
6363 7072 1.106944 CCACATTTCCGGTATGGGGC 61.107 60.000 21.92 0.00 39.56 5.80
6365 7074 1.228793 CATTTCCGGTATGGGGCCA 59.771 57.895 4.39 0.00 38.76 5.36
6367 7076 0.560688 ATTTCCGGTATGGGGCCAAT 59.439 50.000 4.39 0.65 38.76 3.16
6368 7077 0.396417 TTTCCGGTATGGGGCCAATG 60.396 55.000 4.39 0.00 38.76 2.82
6370 7079 1.528309 CCGGTATGGGGCCAATGTC 60.528 63.158 4.39 0.00 0.00 3.06
6374 7083 0.535102 GTATGGGGCCAATGTCTCCG 60.535 60.000 4.39 0.00 0.00 4.63
6375 7084 1.705002 TATGGGGCCAATGTCTCCGG 61.705 60.000 4.39 0.00 0.00 5.14
6397 7109 4.025979 GGTTATAAGCACGAGGACGAAATG 60.026 45.833 9.77 0.00 42.66 2.32
6415 7127 7.584987 ACGAAATGTCAACCTAAAAAGATGAG 58.415 34.615 0.00 0.00 0.00 2.90
6419 7131 3.444034 GTCAACCTAAAAAGATGAGGGGC 59.556 47.826 0.00 0.00 34.41 5.80
6420 7132 3.333680 TCAACCTAAAAAGATGAGGGGCT 59.666 43.478 0.00 0.00 34.41 5.19
6427 7140 4.870021 AAAAGATGAGGGGCTAGATGTT 57.130 40.909 0.00 0.00 0.00 2.71
6428 7141 3.853355 AAGATGAGGGGCTAGATGTTG 57.147 47.619 0.00 0.00 0.00 3.33
6430 7143 2.703007 AGATGAGGGGCTAGATGTTGAC 59.297 50.000 0.00 0.00 0.00 3.18
6450 7163 3.487372 ACTTCTTGTAAACTTGAGGGGC 58.513 45.455 0.00 0.00 0.00 5.80
6466 7179 6.538945 TGAGGGGCCAAAAATATACTTTTC 57.461 37.500 4.39 0.00 0.00 2.29
6612 7327 9.201989 ACCATACATTATAGACTGAAACTCTCA 57.798 33.333 0.00 0.00 0.00 3.27
6678 7393 0.457166 CGAAAGTGCCCACATGCATG 60.457 55.000 25.09 25.09 44.30 4.06
6679 7394 0.738412 GAAAGTGCCCACATGCATGC 60.738 55.000 26.53 11.82 44.30 4.06
6680 7395 1.473497 AAAGTGCCCACATGCATGCA 61.473 50.000 26.53 25.04 44.30 3.96
6681 7396 1.261938 AAGTGCCCACATGCATGCAT 61.262 50.000 27.46 27.46 44.30 3.96
6682 7397 1.227147 GTGCCCACATGCATGCATC 60.227 57.895 30.07 18.51 44.30 3.91
6683 7398 2.027024 GCCCACATGCATGCATCG 59.973 61.111 30.07 24.75 33.90 3.84
6686 7401 2.353030 CACATGCATGCATCGGCG 60.353 61.111 30.07 20.53 45.35 6.46
6731 7446 3.500680 TGGCGTTCTATTGGTTCAAAGAC 59.499 43.478 0.00 0.00 0.00 3.01
6805 7521 5.983333 ATGTGATTTTCCTAGGGAGATGT 57.017 39.130 9.46 0.00 31.21 3.06
6821 7538 6.656693 AGGGAGATGTTTTGTACTGAATTGAG 59.343 38.462 0.00 0.00 0.00 3.02
6834 7551 8.363390 TGTACTGAATTGAGTCTATCATCCATC 58.637 37.037 0.00 0.00 37.89 3.51
6848 7565 5.333299 TCATCCATCTTTTCATTGCTTGG 57.667 39.130 0.00 0.00 0.00 3.61
6852 7569 5.517924 TCCATCTTTTCATTGCTTGGGATA 58.482 37.500 0.00 0.00 0.00 2.59
6859 7576 2.033372 CATTGCTTGGGATATGTGCCA 58.967 47.619 0.00 0.00 44.98 4.92
6882 7599 8.200792 GCCATATAAACCCATTTGTTCAATACA 58.799 33.333 0.00 0.00 34.12 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.040166 TGGACCCGAAATACTAACATCTACTC 59.960 42.308 0.00 0.00 0.00 2.59
1 2 5.895534 TGGACCCGAAATACTAACATCTACT 59.104 40.000 0.00 0.00 0.00 2.57
2 3 5.981915 GTGGACCCGAAATACTAACATCTAC 59.018 44.000 0.00 0.00 0.00 2.59
3 4 5.069516 GGTGGACCCGAAATACTAACATCTA 59.930 44.000 0.00 0.00 0.00 1.98
4 5 4.141779 GGTGGACCCGAAATACTAACATCT 60.142 45.833 0.00 0.00 0.00 2.90
5 6 4.124970 GGTGGACCCGAAATACTAACATC 58.875 47.826 0.00 0.00 0.00 3.06
6 7 3.520317 TGGTGGACCCGAAATACTAACAT 59.480 43.478 0.00 0.00 35.15 2.71
7 8 2.905085 TGGTGGACCCGAAATACTAACA 59.095 45.455 0.00 0.00 35.15 2.41
8 9 3.615224 TGGTGGACCCGAAATACTAAC 57.385 47.619 0.00 0.00 35.15 2.34
9 10 4.225492 TGATTGGTGGACCCGAAATACTAA 59.775 41.667 0.00 0.00 35.15 2.24
10 11 3.775866 TGATTGGTGGACCCGAAATACTA 59.224 43.478 0.00 0.00 35.15 1.82
11 12 2.574369 TGATTGGTGGACCCGAAATACT 59.426 45.455 0.00 0.00 35.15 2.12
12 13 2.681344 GTGATTGGTGGACCCGAAATAC 59.319 50.000 0.00 0.00 35.15 1.89
13 14 2.306219 TGTGATTGGTGGACCCGAAATA 59.694 45.455 0.00 0.00 35.15 1.40
14 15 1.074727 TGTGATTGGTGGACCCGAAAT 59.925 47.619 0.00 0.00 35.15 2.17
15 16 0.474614 TGTGATTGGTGGACCCGAAA 59.525 50.000 0.00 0.00 35.15 3.46
16 17 0.474614 TTGTGATTGGTGGACCCGAA 59.525 50.000 0.00 0.00 35.15 4.30
17 18 0.036164 CTTGTGATTGGTGGACCCGA 59.964 55.000 0.00 0.00 35.15 5.14
18 19 0.036164 TCTTGTGATTGGTGGACCCG 59.964 55.000 0.00 0.00 35.15 5.28
19 20 1.886542 GTTCTTGTGATTGGTGGACCC 59.113 52.381 0.00 0.00 34.29 4.46
20 21 2.863809 AGTTCTTGTGATTGGTGGACC 58.136 47.619 0.00 0.00 0.00 4.46
21 22 4.137543 AGAAGTTCTTGTGATTGGTGGAC 58.862 43.478 0.00 0.00 0.00 4.02
22 23 4.437682 AGAAGTTCTTGTGATTGGTGGA 57.562 40.909 0.00 0.00 0.00 4.02
32 33 4.342862 TCTGCTTGCTAGAAGTTCTTGT 57.657 40.909 11.40 0.00 0.00 3.16
58 59 4.274705 TGATGATGCGCGTGGTAAATAAAT 59.725 37.500 6.97 0.00 0.00 1.40
70 73 1.485943 CGAGATGTGATGATGCGCG 59.514 57.895 0.00 0.00 0.00 6.86
71 74 1.858041 CCGAGATGTGATGATGCGC 59.142 57.895 0.00 0.00 0.00 6.09
121 124 4.099266 ACAAGTTACAACCATGCAACATGT 59.901 37.500 6.80 0.00 38.97 3.21
140 143 2.410730 CCTGCGTTTACCGTCTTACAAG 59.589 50.000 0.00 0.00 39.32 3.16
141 144 2.406130 CCTGCGTTTACCGTCTTACAA 58.594 47.619 0.00 0.00 39.32 2.41
142 145 1.337074 CCCTGCGTTTACCGTCTTACA 60.337 52.381 0.00 0.00 39.32 2.41
143 146 1.067635 TCCCTGCGTTTACCGTCTTAC 60.068 52.381 0.00 0.00 39.32 2.34
144 147 1.203052 CTCCCTGCGTTTACCGTCTTA 59.797 52.381 0.00 0.00 39.32 2.10
145 148 0.037605 CTCCCTGCGTTTACCGTCTT 60.038 55.000 0.00 0.00 39.32 3.01
146 149 0.896940 TCTCCCTGCGTTTACCGTCT 60.897 55.000 0.00 0.00 39.32 4.18
158 161 3.891366 ACAAGGTGAAAAATGTCTCCCTG 59.109 43.478 0.00 0.00 32.57 4.45
163 166 5.913137 TGACAACAAGGTGAAAAATGTCT 57.087 34.783 0.00 0.00 37.27 3.41
167 170 5.234116 GCGAAATGACAACAAGGTGAAAAAT 59.766 36.000 0.00 0.00 0.00 1.82
168 171 4.564769 GCGAAATGACAACAAGGTGAAAAA 59.435 37.500 0.00 0.00 0.00 1.94
206 209 5.120830 CGATTCCCAAGTAGACAAAGTTCAG 59.879 44.000 0.00 0.00 0.00 3.02
271 274 4.780815 ACACAGATGAAGAGGTTGACAAA 58.219 39.130 0.00 0.00 0.00 2.83
290 293 0.951558 ATCGACCAAGGTGCAAACAC 59.048 50.000 0.00 0.00 46.66 3.32
311 314 6.672657 GGAGGATATAAAACCCATAGGCTCTA 59.327 42.308 0.00 0.00 36.11 2.43
319 322 8.757307 TCTGAATAGGAGGATATAAAACCCAT 57.243 34.615 0.00 0.00 0.00 4.00
328 331 9.753674 TGTTTTGTTTTCTGAATAGGAGGATAT 57.246 29.630 0.00 0.00 0.00 1.63
329 332 9.753674 ATGTTTTGTTTTCTGAATAGGAGGATA 57.246 29.630 0.00 0.00 0.00 2.59
330 333 8.655935 ATGTTTTGTTTTCTGAATAGGAGGAT 57.344 30.769 0.00 0.00 0.00 3.24
331 334 9.581289 TTATGTTTTGTTTTCTGAATAGGAGGA 57.419 29.630 0.00 0.00 0.00 3.71
355 358 9.688091 TCAGCAGGTGGTTAAAATATGTATTTA 57.312 29.630 0.00 0.00 35.00 1.40
356 359 8.588290 TCAGCAGGTGGTTAAAATATGTATTT 57.412 30.769 0.00 0.00 37.49 1.40
357 360 8.052748 TCTCAGCAGGTGGTTAAAATATGTATT 58.947 33.333 0.00 0.00 0.00 1.89
358 361 7.573710 TCTCAGCAGGTGGTTAAAATATGTAT 58.426 34.615 0.00 0.00 0.00 2.29
359 362 6.953101 TCTCAGCAGGTGGTTAAAATATGTA 58.047 36.000 0.00 0.00 0.00 2.29
360 363 5.815581 TCTCAGCAGGTGGTTAAAATATGT 58.184 37.500 0.00 0.00 0.00 2.29
361 364 6.949352 ATCTCAGCAGGTGGTTAAAATATG 57.051 37.500 0.00 0.00 0.00 1.78
362 365 7.806180 AGTATCTCAGCAGGTGGTTAAAATAT 58.194 34.615 0.00 0.00 0.00 1.28
363 366 7.195374 AGTATCTCAGCAGGTGGTTAAAATA 57.805 36.000 0.00 0.00 0.00 1.40
364 367 6.067217 AGTATCTCAGCAGGTGGTTAAAAT 57.933 37.500 0.00 0.00 0.00 1.82
365 368 5.499004 AGTATCTCAGCAGGTGGTTAAAA 57.501 39.130 0.00 0.00 0.00 1.52
366 369 5.395324 GCTAGTATCTCAGCAGGTGGTTAAA 60.395 44.000 0.00 0.00 37.73 1.52
370 373 2.035632 GCTAGTATCTCAGCAGGTGGT 58.964 52.381 0.00 0.00 37.73 4.16
373 376 2.091610 TCTGGCTAGTATCTCAGCAGGT 60.092 50.000 0.00 0.00 39.63 4.00
387 390 4.041567 TCAAACAAGGTCAAGATCTGGCTA 59.958 41.667 0.00 0.00 0.00 3.93
389 392 3.149196 TCAAACAAGGTCAAGATCTGGC 58.851 45.455 0.00 0.00 0.00 4.85
390 393 5.772825 TTTCAAACAAGGTCAAGATCTGG 57.227 39.130 0.00 0.00 0.00 3.86
393 396 7.428826 ACTGATTTTCAAACAAGGTCAAGATC 58.571 34.615 0.00 0.00 0.00 2.75
411 414 8.792830 ACACTAGTATGTGCATTAACTGATTT 57.207 30.769 0.00 0.00 41.30 2.17
414 417 8.615878 AAAACACTAGTATGTGCATTAACTGA 57.384 30.769 0.00 0.00 41.30 3.41
421 424 9.139174 GCAAATTTAAAACACTAGTATGTGCAT 57.861 29.630 9.03 0.00 41.30 3.96
422 425 8.138074 TGCAAATTTAAAACACTAGTATGTGCA 58.862 29.630 11.64 11.64 41.30 4.57
467 470 8.639428 GGACAAGAAATTTAGCTTCGAATTTTC 58.361 33.333 0.00 10.03 36.04 2.29
468 471 8.141268 TGGACAAGAAATTTAGCTTCGAATTTT 58.859 29.630 0.00 3.14 36.04 1.82
472 475 6.627395 TTGGACAAGAAATTTAGCTTCGAA 57.373 33.333 0.00 0.00 0.00 3.71
474 477 6.668323 TCTTTGGACAAGAAATTTAGCTTCG 58.332 36.000 0.00 0.00 0.00 3.79
475 478 7.875971 TCTCTTTGGACAAGAAATTTAGCTTC 58.124 34.615 0.00 0.00 0.00 3.86
476 479 7.823745 TCTCTTTGGACAAGAAATTTAGCTT 57.176 32.000 0.00 0.00 0.00 3.74
478 481 9.780413 CTATTCTCTTTGGACAAGAAATTTAGC 57.220 33.333 0.00 0.00 33.10 3.09
482 493 7.765695 TGCTATTCTCTTTGGACAAGAAATT 57.234 32.000 0.00 0.00 33.10 1.82
484 495 7.581213 TTTGCTATTCTCTTTGGACAAGAAA 57.419 32.000 0.00 0.00 33.10 2.52
603 620 7.125391 ACCTTGACATGACCAATGGTATATTT 58.875 34.615 4.23 0.00 40.94 1.40
610 627 3.684908 TGTACCTTGACATGACCAATGG 58.315 45.455 0.00 0.00 40.94 3.16
612 629 6.377146 GGTTATTGTACCTTGACATGACCAAT 59.623 38.462 0.00 0.21 35.23 3.16
616 633 4.933400 ACGGTTATTGTACCTTGACATGAC 59.067 41.667 0.00 0.00 35.97 3.06
630 647 2.717011 GCACAAACAACGACGGTTATTG 59.283 45.455 0.00 2.75 37.78 1.90
638 655 1.014352 ACCTCTGCACAAACAACGAC 58.986 50.000 0.00 0.00 0.00 4.34
693 711 1.001268 GGTAGAGAGATCGAATGCGCA 60.001 52.381 14.96 14.96 37.46 6.09
694 712 1.268352 AGGTAGAGAGATCGAATGCGC 59.732 52.381 0.00 0.00 37.46 6.09
745 763 5.299531 TCCGGTTGTCATTTGTATGTCAAAA 59.700 36.000 0.00 0.00 46.97 2.44
769 787 6.482973 CACCAGCCATTGTTGAAACTATTTTT 59.517 34.615 0.00 0.00 0.00 1.94
975 1008 2.105134 ACCGATAGTGAAACCACCAACA 59.895 45.455 0.00 0.00 37.80 3.33
993 1026 4.399303 AGAAGCCATCCTTTCATAAAACCG 59.601 41.667 0.00 0.00 32.78 4.44
1071 1104 6.420306 TCGTGATTTTGGTCATCATTTTTGTG 59.580 34.615 0.00 0.00 33.22 3.33
1095 1128 4.186926 TGTATGATGCTTGACTTCTGCTC 58.813 43.478 0.00 0.00 0.00 4.26
1190 1223 7.341769 TGCATACTAGCCATTGGATAAAACTTT 59.658 33.333 6.95 0.00 0.00 2.66
1251 1307 4.579869 ACCTATTTTGCGGATATAGCCAG 58.420 43.478 7.97 1.24 0.00 4.85
1274 1330 3.366374 GCTTCTCCCCATTGAAAGAAACG 60.366 47.826 0.00 0.00 0.00 3.60
1298 1354 9.799106 ATTAGTTTATTGTATGCTTCTATGGCT 57.201 29.630 0.00 0.00 0.00 4.75
1330 1386 8.442632 TTCCTCAACAACATTCTCATATGATC 57.557 34.615 5.72 0.00 0.00 2.92
1397 1453 2.888212 AGGCCATAGCTAGAGAAGAGG 58.112 52.381 5.01 0.00 39.73 3.69
1442 1498 7.310485 CCTCCAGTGTATCCTTTTGTAAGTACT 60.310 40.741 0.00 0.00 0.00 2.73
1502 1558 4.379243 AGAACTCACGCTGCCCCG 62.379 66.667 0.00 0.00 0.00 5.73
1520 1576 9.308318 GATGAATTCTAGTTCAAGGTAAGAGAC 57.692 37.037 7.05 0.00 41.09 3.36
1546 1602 7.327975 TGTTCCACTAATGTGTTATAGGACAG 58.672 38.462 0.00 0.00 42.34 3.51
1570 1649 5.868043 TCTGCATCAAACAGTCAGTATTG 57.132 39.130 0.00 0.00 36.50 1.90
1592 1719 2.487265 CGGGGCTGCATTACCTAAAGAT 60.487 50.000 0.50 0.00 0.00 2.40
1705 1832 7.447238 CCCTCATTTCTTCTAGTTGTTTACCAA 59.553 37.037 0.00 0.00 0.00 3.67
1778 1905 5.835113 ATCCATCAAATGTTAGTTTCCCG 57.165 39.130 0.00 0.00 0.00 5.14
1789 1916 7.563888 ACATGTAGTGAGAATCCATCAAATG 57.436 36.000 0.00 0.00 0.00 2.32
1816 1943 2.918712 AGCCATCATAGTGCCAGTAC 57.081 50.000 0.00 0.00 0.00 2.73
1828 1955 3.242867 CTCTCCCCAACTATAGCCATCA 58.757 50.000 0.00 0.00 0.00 3.07
1829 1956 3.007398 CACTCTCCCCAACTATAGCCATC 59.993 52.174 0.00 0.00 0.00 3.51
1892 2019 0.179048 CACCAGCCTGCGGATCATAA 60.179 55.000 0.00 0.00 0.00 1.90
2075 2202 1.980951 TTGCCGCATTAGCAAGCTCG 61.981 55.000 0.00 0.00 44.95 5.03
2104 2231 0.596082 ACGCACATTGGGCAACTTAC 59.404 50.000 12.14 0.00 33.10 2.34
2181 2318 1.613836 ATACCCCCGACACGAGATAC 58.386 55.000 0.00 0.00 0.00 2.24
2191 2328 2.198336 ACCATTGTGTTATACCCCCGA 58.802 47.619 0.00 0.00 0.00 5.14
2193 2330 3.028130 CCAACCATTGTGTTATACCCCC 58.972 50.000 0.00 0.00 0.00 5.40
2236 2373 0.263172 TCCTTTGCTTTTGTCCCCCA 59.737 50.000 0.00 0.00 0.00 4.96
2300 2437 5.720371 AATGCACTAGTAGCCTCATCTAG 57.280 43.478 12.71 0.00 37.67 2.43
2401 2538 5.820947 AGCATTCCTAATGGTACTTAAACGG 59.179 40.000 2.67 0.00 46.85 4.44
2648 2798 8.407064 AGTAGACAATCGACGATCTATTCTTTT 58.593 33.333 11.42 0.00 0.00 2.27
2678 2828 1.134694 GGCTTGCGCTTTTAGACCG 59.865 57.895 9.73 0.00 36.09 4.79
2689 2839 0.455633 GCTTCATTGACAGGCTTGCG 60.456 55.000 0.00 0.00 0.00 4.85
2721 2874 2.625790 CCGCTACTGCTTCCTAGAGAAT 59.374 50.000 0.00 0.00 36.97 2.40
2752 2905 2.116238 GGCAGTCTGGAGGGTAATGTA 58.884 52.381 1.14 0.00 0.00 2.29
2756 2909 2.683916 CAGGCAGTCTGGAGGGTAA 58.316 57.895 1.14 0.00 39.76 2.85
2765 2918 1.228063 CAACTGTGCCAGGCAGTCT 60.228 57.895 16.83 0.00 45.36 3.24
2770 2923 1.237285 ACGATTCAACTGTGCCAGGC 61.237 55.000 3.66 3.66 35.51 4.85
2829 2982 3.073678 GGGACCAAACCATCAAAATTGC 58.926 45.455 0.00 0.00 0.00 3.56
2854 3013 0.535102 GCCGTACCATGGGAGATTGG 60.535 60.000 18.09 8.39 39.02 3.16
2855 3014 0.469917 AGCCGTACCATGGGAGATTG 59.530 55.000 18.09 0.00 0.00 2.67
2914 3073 2.281139 GCTGCCGCTAAGGATCCC 60.281 66.667 8.55 0.00 45.00 3.85
3084 3243 9.171877 CAGCTATTCCAAATAAGAAGAACTCTT 57.828 33.333 0.00 0.00 46.52 2.85
3237 3396 7.125792 AGTATAATTCACACAACCTAGAGGG 57.874 40.000 0.00 0.00 40.27 4.30
3278 3442 6.265649 GCTCCACTGTAAGATATAGAGTTGGA 59.734 42.308 0.00 0.00 37.43 3.53
3283 3448 6.892658 AGTGCTCCACTGTAAGATATAGAG 57.107 41.667 0.00 0.00 43.63 2.43
3285 3450 6.183360 ACCAAGTGCTCCACTGTAAGATATAG 60.183 42.308 0.00 0.00 44.62 1.31
3373 3538 7.386299 GTGACAAGTGTTGAGATAATCTGAACT 59.614 37.037 0.00 0.00 40.51 3.01
3538 3703 4.860022 AGGAACATCCCAATAGTTTCCTG 58.140 43.478 0.00 0.00 37.19 3.86
3623 3790 5.572896 GCCTATGTGCAAAGAAACAACATAC 59.427 40.000 0.00 0.00 0.00 2.39
3700 3884 3.378742 TGCTTTCTTGGCTTTTCGTACAA 59.621 39.130 0.00 0.00 0.00 2.41
3705 3889 7.992180 ATATTATTGCTTTCTTGGCTTTTCG 57.008 32.000 0.00 0.00 0.00 3.46
3720 3904 7.957484 CGTATGGCACTTCTACAATATTATTGC 59.043 37.037 14.88 1.09 0.00 3.56
3722 3906 9.424319 CTCGTATGGCACTTCTACAATATTATT 57.576 33.333 0.00 0.00 0.00 1.40
3726 3910 6.650427 TCTCGTATGGCACTTCTACAATAT 57.350 37.500 0.00 0.00 0.00 1.28
3731 3915 6.663944 AAATTTCTCGTATGGCACTTCTAC 57.336 37.500 0.00 0.00 0.00 2.59
3739 3923 4.267357 TGCGTAAAATTTCTCGTATGGC 57.733 40.909 13.60 3.22 0.00 4.40
3744 3928 9.864034 CTAAATCATATGCGTAAAATTTCTCGT 57.136 29.630 13.60 2.00 0.00 4.18
3848 4035 6.763610 GGTGACATGCTCTACTTTATTTAGCT 59.236 38.462 0.00 0.00 34.28 3.32
3869 4075 3.961480 ATCTGAACGACATCAAGGTGA 57.039 42.857 0.00 0.00 0.00 4.02
3872 4078 5.957910 GTTCTATCTGAACGACATCAAGG 57.042 43.478 0.00 0.00 44.49 3.61
3895 4101 3.790089 AGCAAGGGTAACAAGCTAGTT 57.210 42.857 0.00 0.00 37.65 2.24
3903 4109 9.474313 AATAATTCATAGAAAGCAAGGGTAACA 57.526 29.630 0.00 0.00 39.74 2.41
3904 4110 9.736023 CAATAATTCATAGAAAGCAAGGGTAAC 57.264 33.333 0.00 0.00 0.00 2.50
3930 4145 2.673368 CGAGCCAATGTTCCTGACTTAC 59.327 50.000 0.00 0.00 0.00 2.34
4003 4228 3.761752 TCGAACACCATCATGACACTAGA 59.238 43.478 0.00 0.00 0.00 2.43
4024 4249 6.519761 CGCATTGTAATGTTGTAAGTCAAGTC 59.480 38.462 6.48 0.00 38.65 3.01
4065 4296 5.487488 TGGGTTAGAATATGAGAAGGTGTGT 59.513 40.000 0.00 0.00 0.00 3.72
4074 4305 7.555554 GGATCATGGAATGGGTTAGAATATGAG 59.444 40.741 0.00 0.00 46.73 2.90
4178 4446 1.463444 CCACTTTCCTTTCGCCTTACG 59.537 52.381 0.00 0.00 45.62 3.18
4180 4448 3.071892 TCTTCCACTTTCCTTTCGCCTTA 59.928 43.478 0.00 0.00 0.00 2.69
4299 4597 9.731819 TCTTACTACGCATGATAGAGTAAAAAG 57.268 33.333 10.51 3.17 33.45 2.27
4368 4682 3.725490 TCATCTGGAGAATGAGCAATCG 58.275 45.455 0.00 0.00 0.00 3.34
4634 4969 3.703001 ACCTCGAAGATGTCACCAAAT 57.297 42.857 0.00 0.00 33.89 2.32
4675 5095 4.189231 CACTTATTTTGGGACGTAGGGAG 58.811 47.826 0.00 0.00 0.00 4.30
4677 5097 3.937079 GACACTTATTTTGGGACGTAGGG 59.063 47.826 0.00 0.00 0.00 3.53
4679 5099 5.929992 TCAAGACACTTATTTTGGGACGTAG 59.070 40.000 0.00 0.00 0.00 3.51
4680 5100 5.856156 TCAAGACACTTATTTTGGGACGTA 58.144 37.500 0.00 0.00 0.00 3.57
4682 5102 4.378459 GCTCAAGACACTTATTTTGGGACG 60.378 45.833 0.00 0.00 0.00 4.79
4683 5103 4.762251 AGCTCAAGACACTTATTTTGGGAC 59.238 41.667 0.00 0.00 0.00 4.46
4684 5104 4.985538 AGCTCAAGACACTTATTTTGGGA 58.014 39.130 0.00 0.00 0.00 4.37
4685 5105 5.712152 AAGCTCAAGACACTTATTTTGGG 57.288 39.130 0.00 0.00 0.00 4.12
4686 5106 7.440523 ACTAAGCTCAAGACACTTATTTTGG 57.559 36.000 3.19 0.00 0.00 3.28
4687 5107 8.988934 TGTACTAAGCTCAAGACACTTATTTTG 58.011 33.333 3.19 0.00 0.00 2.44
4688 5108 9.555727 TTGTACTAAGCTCAAGACACTTATTTT 57.444 29.630 3.19 0.00 0.00 1.82
4689 5109 9.555727 TTTGTACTAAGCTCAAGACACTTATTT 57.444 29.630 3.19 0.00 0.00 1.40
4690 5110 9.726438 ATTTGTACTAAGCTCAAGACACTTATT 57.274 29.630 3.19 0.00 0.00 1.40
4691 5111 9.726438 AATTTGTACTAAGCTCAAGACACTTAT 57.274 29.630 3.19 0.00 0.00 1.73
4693 5113 8.345565 CAAATTTGTACTAAGCTCAAGACACTT 58.654 33.333 10.15 0.00 0.00 3.16
4694 5114 7.499232 ACAAATTTGTACTAAGCTCAAGACACT 59.501 33.333 22.10 0.00 40.16 3.55
4695 5115 7.639945 ACAAATTTGTACTAAGCTCAAGACAC 58.360 34.615 22.10 2.09 40.16 3.67
4720 5140 7.881751 TGTCTCAACTTTGTACTAGCTCTAGTA 59.118 37.037 11.59 11.59 43.98 1.82
4722 5142 7.024768 GTGTCTCAACTTTGTACTAGCTCTAG 58.975 42.308 0.00 2.55 39.04 2.43
4723 5143 6.715718 AGTGTCTCAACTTTGTACTAGCTCTA 59.284 38.462 0.00 0.00 0.00 2.43
4724 5144 5.536916 AGTGTCTCAACTTTGTACTAGCTCT 59.463 40.000 0.00 0.00 0.00 4.09
4725 5145 5.774630 AGTGTCTCAACTTTGTACTAGCTC 58.225 41.667 0.00 0.00 0.00 4.09
4726 5146 5.793030 AGTGTCTCAACTTTGTACTAGCT 57.207 39.130 0.00 0.00 0.00 3.32
4727 5147 8.535690 AATAAGTGTCTCAACTTTGTACTAGC 57.464 34.615 0.00 0.00 40.77 3.42
4730 5150 8.621286 CCAAAATAAGTGTCTCAACTTTGTACT 58.379 33.333 0.00 0.00 40.77 2.73
4731 5151 7.860872 CCCAAAATAAGTGTCTCAACTTTGTAC 59.139 37.037 0.00 0.00 40.77 2.90
4732 5152 7.776030 TCCCAAAATAAGTGTCTCAACTTTGTA 59.224 33.333 0.00 0.00 40.77 2.41
4733 5153 6.605594 TCCCAAAATAAGTGTCTCAACTTTGT 59.394 34.615 0.00 0.00 40.77 2.83
4734 5154 7.038154 TCCCAAAATAAGTGTCTCAACTTTG 57.962 36.000 0.00 0.00 40.77 2.77
4735 5155 7.255942 CCATCCCAAAATAAGTGTCTCAACTTT 60.256 37.037 0.00 0.00 40.77 2.66
4736 5156 6.209391 CCATCCCAAAATAAGTGTCTCAACTT 59.791 38.462 0.00 0.00 42.89 2.66
4737 5157 5.711976 CCATCCCAAAATAAGTGTCTCAACT 59.288 40.000 0.00 0.00 0.00 3.16
4738 5158 5.710099 TCCATCCCAAAATAAGTGTCTCAAC 59.290 40.000 0.00 0.00 0.00 3.18
4739 5159 5.886609 TCCATCCCAAAATAAGTGTCTCAA 58.113 37.500 0.00 0.00 0.00 3.02
4740 5160 5.250543 TCTCCATCCCAAAATAAGTGTCTCA 59.749 40.000 0.00 0.00 0.00 3.27
4741 5161 5.745227 TCTCCATCCCAAAATAAGTGTCTC 58.255 41.667 0.00 0.00 0.00 3.36
4742 5162 5.488919 TCTCTCCATCCCAAAATAAGTGTCT 59.511 40.000 0.00 0.00 0.00 3.41
4743 5163 5.745227 TCTCTCCATCCCAAAATAAGTGTC 58.255 41.667 0.00 0.00 0.00 3.67
4744 5164 5.251700 ACTCTCTCCATCCCAAAATAAGTGT 59.748 40.000 0.00 0.00 0.00 3.55
4745 5165 5.749462 ACTCTCTCCATCCCAAAATAAGTG 58.251 41.667 0.00 0.00 0.00 3.16
4746 5166 6.100424 CCTACTCTCTCCATCCCAAAATAAGT 59.900 42.308 0.00 0.00 0.00 2.24
4747 5167 6.327626 TCCTACTCTCTCCATCCCAAAATAAG 59.672 42.308 0.00 0.00 0.00 1.73
4748 5168 6.099845 GTCCTACTCTCTCCATCCCAAAATAA 59.900 42.308 0.00 0.00 0.00 1.40
4749 5169 5.602978 GTCCTACTCTCTCCATCCCAAAATA 59.397 44.000 0.00 0.00 0.00 1.40
4750 5170 4.410555 GTCCTACTCTCTCCATCCCAAAAT 59.589 45.833 0.00 0.00 0.00 1.82
4751 5171 3.775316 GTCCTACTCTCTCCATCCCAAAA 59.225 47.826 0.00 0.00 0.00 2.44
4752 5172 3.375699 GTCCTACTCTCTCCATCCCAAA 58.624 50.000 0.00 0.00 0.00 3.28
4753 5173 2.687014 CGTCCTACTCTCTCCATCCCAA 60.687 54.545 0.00 0.00 0.00 4.12
4754 5174 1.133761 CGTCCTACTCTCTCCATCCCA 60.134 57.143 0.00 0.00 0.00 4.37
4755 5175 1.611519 CGTCCTACTCTCTCCATCCC 58.388 60.000 0.00 0.00 0.00 3.85
4756 5176 1.133730 ACCGTCCTACTCTCTCCATCC 60.134 57.143 0.00 0.00 0.00 3.51
4757 5177 2.351706 ACCGTCCTACTCTCTCCATC 57.648 55.000 0.00 0.00 0.00 3.51
4758 5178 2.830651 AACCGTCCTACTCTCTCCAT 57.169 50.000 0.00 0.00 0.00 3.41
4759 5179 2.041350 AGAAACCGTCCTACTCTCTCCA 59.959 50.000 0.00 0.00 0.00 3.86
4760 5180 2.725637 AGAAACCGTCCTACTCTCTCC 58.274 52.381 0.00 0.00 0.00 3.71
4761 5181 3.673866 GCAAGAAACCGTCCTACTCTCTC 60.674 52.174 0.00 0.00 0.00 3.20
4762 5182 2.231721 GCAAGAAACCGTCCTACTCTCT 59.768 50.000 0.00 0.00 0.00 3.10
4763 5183 2.231721 AGCAAGAAACCGTCCTACTCTC 59.768 50.000 0.00 0.00 0.00 3.20
4764 5184 2.249139 AGCAAGAAACCGTCCTACTCT 58.751 47.619 0.00 0.00 0.00 3.24
4765 5185 2.745515 AGCAAGAAACCGTCCTACTC 57.254 50.000 0.00 0.00 0.00 2.59
4766 5186 3.056035 CCTTAGCAAGAAACCGTCCTACT 60.056 47.826 0.00 0.00 0.00 2.57
4767 5187 3.056322 TCCTTAGCAAGAAACCGTCCTAC 60.056 47.826 0.00 0.00 0.00 3.18
4768 5188 3.167485 TCCTTAGCAAGAAACCGTCCTA 58.833 45.455 0.00 0.00 0.00 2.94
4769 5189 1.975680 TCCTTAGCAAGAAACCGTCCT 59.024 47.619 0.00 0.00 0.00 3.85
4770 5190 2.467566 TCCTTAGCAAGAAACCGTCC 57.532 50.000 0.00 0.00 0.00 4.79
4771 5191 4.254492 AGAATCCTTAGCAAGAAACCGTC 58.746 43.478 0.00 0.00 0.00 4.79
4772 5192 4.020128 AGAGAATCCTTAGCAAGAAACCGT 60.020 41.667 0.00 0.00 33.66 4.83
4773 5193 4.508662 AGAGAATCCTTAGCAAGAAACCG 58.491 43.478 0.00 0.00 33.66 4.44
4774 5194 5.940470 TGAAGAGAATCCTTAGCAAGAAACC 59.060 40.000 0.00 0.00 33.66 3.27
4834 5255 5.178623 TGATGTTGTGAAAGTTATGACCGAC 59.821 40.000 0.00 0.00 0.00 4.79
4835 5256 5.301555 TGATGTTGTGAAAGTTATGACCGA 58.698 37.500 0.00 0.00 0.00 4.69
4837 5258 8.081633 TGAAATGATGTTGTGAAAGTTATGACC 58.918 33.333 0.00 0.00 0.00 4.02
4854 5275 8.613060 AGTATGGCTTACTATGTGAAATGATG 57.387 34.615 11.02 0.00 39.44 3.07
4855 5276 9.632638 AAAGTATGGCTTACTATGTGAAATGAT 57.367 29.630 12.83 0.00 40.37 2.45
4873 5294 4.448732 GCAAAGAAAACCTGCAAAGTATGG 59.551 41.667 0.00 0.00 36.09 2.74
4964 5385 5.615289 AGCAAATACGGAGATAGCTGAAAT 58.385 37.500 0.00 0.00 0.00 2.17
4965 5386 5.023533 AGCAAATACGGAGATAGCTGAAA 57.976 39.130 0.00 0.00 0.00 2.69
5108 5529 5.591877 GCAGGGTAAAGTCATTGAAGATGAT 59.408 40.000 0.00 0.00 0.00 2.45
5134 5555 3.436577 TTAACCTTGCCAACCGGAATA 57.563 42.857 9.46 0.00 0.00 1.75
5141 5562 4.282449 AGTGGGTAAATTAACCTTGCCAAC 59.718 41.667 8.72 5.92 39.65 3.77
5142 5563 4.484912 AGTGGGTAAATTAACCTTGCCAA 58.515 39.130 8.72 0.00 39.65 4.52
5212 5635 9.886132 GAAGACCATAAAGGAAGTAAATGACTA 57.114 33.333 0.00 0.00 41.22 2.59
5238 5662 7.492524 TCTCCAACAAGTGCAATAGTCTATAG 58.507 38.462 0.00 0.00 0.00 1.31
5276 5700 3.734776 AGCGCAATTACCGTTAACTTC 57.265 42.857 11.47 0.00 0.00 3.01
5281 5705 3.794717 TCCAATAGCGCAATTACCGTTA 58.205 40.909 11.47 0.00 0.00 3.18
5294 5718 7.123997 TCAGGATCATAGAATCTCTCCAATAGC 59.876 40.741 0.00 0.00 0.00 2.97
5323 5747 3.525609 TCCATCCAATAAAGTGGTGCCTA 59.474 43.478 0.00 0.00 39.88 3.93
5332 5756 5.448654 TGATTCCCACTCCATCCAATAAAG 58.551 41.667 0.00 0.00 0.00 1.85
5410 5834 5.292834 CGAATAGTGTCATTGAAGAGCACAT 59.707 40.000 7.59 0.00 32.99 3.21
5429 5853 4.314961 CATAGGCTATGTTGGCACGAATA 58.685 43.478 23.46 0.00 34.73 1.75
5456 5880 2.808543 CTCCTCTTTGACTTCCCGTTTG 59.191 50.000 0.00 0.00 0.00 2.93
5459 5883 0.977395 CCTCCTCTTTGACTTCCCGT 59.023 55.000 0.00 0.00 0.00 5.28
5460 5884 1.205893 CTCCTCCTCTTTGACTTCCCG 59.794 57.143 0.00 0.00 0.00 5.14
5470 5894 2.899256 GCTGATATGAGCTCCTCCTCTT 59.101 50.000 12.15 0.00 35.95 2.85
5471 5895 2.158340 TGCTGATATGAGCTCCTCCTCT 60.158 50.000 15.43 0.00 39.90 3.69
5486 5910 0.323999 TGGATGCCTTTGCTGCTGAT 60.324 50.000 0.00 0.00 38.71 2.90
5536 5960 2.550978 CAACGGAGGTGTCATATCCAC 58.449 52.381 6.98 0.00 32.31 4.02
5620 6044 7.095691 CGAGTAGTAGTATCTTAGGGTCTTTCG 60.096 44.444 0.00 0.00 0.00 3.46
5763 6187 5.705441 GGAGAACTTCAATGGTATCAACACA 59.295 40.000 0.00 0.00 0.00 3.72
5779 6203 2.338809 TCACACCATCCTGGAGAACTT 58.661 47.619 1.52 0.00 40.96 2.66
5821 6245 5.391310 CCATCTTTGAGTTTCATCAAGGACG 60.391 44.000 3.76 0.00 44.82 4.79
5834 6258 4.833478 AGCATACACTCCATCTTTGAGT 57.167 40.909 0.00 0.00 43.70 3.41
5835 6259 5.064452 GTGAAGCATACACTCCATCTTTGAG 59.936 44.000 0.00 0.00 35.66 3.02
5904 6330 3.682377 CCATAAAAATTGGAACCGGTTGC 59.318 43.478 29.91 29.91 36.26 4.17
5905 6331 3.682377 GCCATAAAAATTGGAACCGGTTG 59.318 43.478 27.87 5.99 36.26 3.77
5906 6332 3.325135 TGCCATAAAAATTGGAACCGGTT 59.675 39.130 22.50 22.50 36.26 4.44
5907 6333 2.900546 TGCCATAAAAATTGGAACCGGT 59.099 40.909 0.00 0.00 36.26 5.28
5921 6351 6.611613 TCCCAAACAATAAATGTGCCATAA 57.388 33.333 0.00 0.00 42.99 1.90
5935 6365 7.396055 CCTCTTAATTAAGGTCATCCCAAACAA 59.604 37.037 22.11 0.45 34.14 2.83
5942 6372 6.181206 AGCTCCTCTTAATTAAGGTCATCC 57.819 41.667 22.11 9.11 34.12 3.51
5943 6373 7.275920 TCAAGCTCCTCTTAATTAAGGTCATC 58.724 38.462 22.11 10.95 34.12 2.92
5945 6375 6.440647 TCTCAAGCTCCTCTTAATTAAGGTCA 59.559 38.462 22.11 5.35 34.12 4.02
5953 6383 7.856415 AGTTTACATCTCAAGCTCCTCTTAAT 58.144 34.615 0.00 0.00 32.74 1.40
5954 6384 7.246171 AGTTTACATCTCAAGCTCCTCTTAA 57.754 36.000 0.00 0.00 32.74 1.85
5955 6385 6.859112 AGTTTACATCTCAAGCTCCTCTTA 57.141 37.500 0.00 0.00 32.74 2.10
5956 6386 5.753721 AGTTTACATCTCAAGCTCCTCTT 57.246 39.130 0.00 0.00 34.78 2.85
5957 6387 7.782644 ACTATAGTTTACATCTCAAGCTCCTCT 59.217 37.037 0.00 0.00 0.00 3.69
5958 6388 7.947282 ACTATAGTTTACATCTCAAGCTCCTC 58.053 38.462 0.00 0.00 0.00 3.71
5959 6389 7.906199 ACTATAGTTTACATCTCAAGCTCCT 57.094 36.000 0.00 0.00 0.00 3.69
6077 6508 6.037940 CGACATGAGAAATGGATGTTTGAGAT 59.962 38.462 0.00 0.00 30.39 2.75
6088 6519 5.550232 TTTCACATCGACATGAGAAATGG 57.450 39.130 0.00 0.00 41.75 3.16
6095 6526 3.187022 CACTGCTTTTCACATCGACATGA 59.813 43.478 0.00 0.00 33.72 3.07
6152 6590 7.013750 TGACATGTACAACATTCTTAAAAGGCA 59.986 33.333 0.00 0.00 36.53 4.75
6192 6630 5.429957 AGAGAAACAAGAGTTGCAACATC 57.570 39.130 30.11 22.40 38.17 3.06
6230 6912 2.168728 AGATACCGAAGAAGCACCTTCC 59.831 50.000 11.06 0.07 40.98 3.46
6295 7002 4.557899 AGATGAGGGAGAGAGAGGAAAT 57.442 45.455 0.00 0.00 0.00 2.17
6344 7053 1.106944 GCCCCATACCGGAAATGTGG 61.107 60.000 9.46 13.37 36.56 4.17
6346 7055 1.229076 GGCCCCATACCGGAAATGT 59.771 57.895 9.46 0.00 36.56 2.71
6347 7056 0.396417 TTGGCCCCATACCGGAAATG 60.396 55.000 9.46 11.65 36.56 2.32
6348 7057 0.560688 ATTGGCCCCATACCGGAAAT 59.439 50.000 9.46 0.00 36.56 2.17
6349 7058 0.396417 CATTGGCCCCATACCGGAAA 60.396 55.000 9.46 0.00 36.56 3.13
6352 7061 1.528309 GACATTGGCCCCATACCGG 60.528 63.158 0.00 0.00 0.00 5.28
6353 7062 0.535102 GAGACATTGGCCCCATACCG 60.535 60.000 0.00 0.00 0.00 4.02
6354 7063 0.178990 GGAGACATTGGCCCCATACC 60.179 60.000 0.00 0.00 0.00 2.73
6356 7065 1.705002 CCGGAGACATTGGCCCCATA 61.705 60.000 0.00 0.00 0.00 2.74
6357 7066 2.597340 CGGAGACATTGGCCCCAT 59.403 61.111 0.00 0.00 0.00 4.00
6359 7068 1.917336 TAACCGGAGACATTGGCCCC 61.917 60.000 9.46 0.00 0.00 5.80
6362 7071 2.548480 GCTTATAACCGGAGACATTGGC 59.452 50.000 9.46 0.00 0.00 4.52
6363 7072 3.560068 GTGCTTATAACCGGAGACATTGG 59.440 47.826 9.46 0.00 0.00 3.16
6365 7074 3.131577 TCGTGCTTATAACCGGAGACATT 59.868 43.478 9.46 0.00 0.00 2.71
6367 7076 2.093890 TCGTGCTTATAACCGGAGACA 58.906 47.619 9.46 0.00 0.00 3.41
6368 7077 2.543238 CCTCGTGCTTATAACCGGAGAC 60.543 54.545 9.46 0.00 0.00 3.36
6370 7079 1.679680 TCCTCGTGCTTATAACCGGAG 59.320 52.381 9.46 0.00 0.00 4.63
6374 7083 2.857592 TCGTCCTCGTGCTTATAACC 57.142 50.000 0.00 0.00 38.33 2.85
6375 7084 4.565564 ACATTTCGTCCTCGTGCTTATAAC 59.434 41.667 0.00 0.00 38.33 1.89
6397 7109 3.444034 GCCCCTCATCTTTTTAGGTTGAC 59.556 47.826 0.00 0.00 0.00 3.18
6400 7112 4.788617 TCTAGCCCCTCATCTTTTTAGGTT 59.211 41.667 0.00 0.00 0.00 3.50
6404 7116 5.975988 ACATCTAGCCCCTCATCTTTTTA 57.024 39.130 0.00 0.00 0.00 1.52
6411 7123 2.769209 AGTCAACATCTAGCCCCTCAT 58.231 47.619 0.00 0.00 0.00 2.90
6412 7124 2.254152 AGTCAACATCTAGCCCCTCA 57.746 50.000 0.00 0.00 0.00 3.86
6413 7125 2.769095 AGAAGTCAACATCTAGCCCCTC 59.231 50.000 0.00 0.00 0.00 4.30
6415 7127 3.274288 CAAGAAGTCAACATCTAGCCCC 58.726 50.000 0.00 0.00 0.00 5.80
6419 7131 9.261180 TCAAGTTTACAAGAAGTCAACATCTAG 57.739 33.333 0.00 0.00 36.91 2.43
6420 7132 9.261180 CTCAAGTTTACAAGAAGTCAACATCTA 57.739 33.333 0.00 0.00 36.91 1.98
6427 7140 4.714632 CCCCTCAAGTTTACAAGAAGTCA 58.285 43.478 0.00 0.00 0.00 3.41
6428 7141 3.502595 GCCCCTCAAGTTTACAAGAAGTC 59.497 47.826 0.00 0.00 0.00 3.01
6430 7143 2.820197 GGCCCCTCAAGTTTACAAGAAG 59.180 50.000 0.00 0.00 0.00 2.85
6495 7208 2.224992 ACCACACCAAATATGCACTCCA 60.225 45.455 0.00 0.00 0.00 3.86
6562 7277 9.255029 GGTAGCCATAATACAATTTCCCAATAT 57.745 33.333 0.00 0.00 0.00 1.28
6564 7279 7.072562 TGGTAGCCATAATACAATTTCCCAAT 58.927 34.615 0.00 0.00 0.00 3.16
6578 7293 9.541884 TCAGTCTATAATGTATGGTAGCCATAA 57.458 33.333 9.20 2.13 46.46 1.90
6583 7298 9.413048 GAGTTTCAGTCTATAATGTATGGTAGC 57.587 37.037 0.00 0.00 0.00 3.58
6599 7314 8.256611 TGCATTAACTAATGAGAGTTTCAGTC 57.743 34.615 12.61 0.00 44.40 3.51
6648 7363 1.595609 GCACTTTCGCTTGTCATTCG 58.404 50.000 0.00 0.00 0.00 3.34
6679 7394 2.490148 TAGGGAGCTCACGCCGATG 61.490 63.158 17.19 0.00 36.43 3.84
6680 7395 2.123854 TAGGGAGCTCACGCCGAT 60.124 61.111 17.19 0.00 36.43 4.18
6681 7396 3.138798 GTAGGGAGCTCACGCCGA 61.139 66.667 17.19 0.76 36.43 5.54
6682 7397 3.001902 TTGTAGGGAGCTCACGCCG 62.002 63.158 17.19 0.00 36.43 6.46
6683 7398 1.448013 GTTGTAGGGAGCTCACGCC 60.448 63.158 17.19 7.78 36.60 5.68
6686 7401 2.289694 ACATGTGTTGTAGGGAGCTCAC 60.290 50.000 17.19 13.15 36.57 3.51
6689 7404 1.699634 ACACATGTGTTGTAGGGAGCT 59.300 47.619 25.76 0.00 41.83 4.09
6694 7409 0.516877 CGCCACACATGTGTTGTAGG 59.483 55.000 28.64 25.15 42.83 3.18
6710 7425 3.424433 CGTCTTTGAACCAATAGAACGCC 60.424 47.826 0.00 0.00 0.00 5.68
6712 7427 5.347635 TCATCGTCTTTGAACCAATAGAACG 59.652 40.000 0.00 0.00 0.00 3.95
6714 7429 7.129109 GTTCATCGTCTTTGAACCAATAGAA 57.871 36.000 5.46 0.00 44.57 2.10
6775 7491 6.607198 TCCCTAGGAAAATCACATTCAATTCC 59.393 38.462 11.48 0.00 37.24 3.01
6782 7498 6.332976 ACATCTCCCTAGGAAAATCACATT 57.667 37.500 11.48 0.00 0.00 2.71
6805 7521 9.383519 GGATGATAGACTCAATTCAGTACAAAA 57.616 33.333 0.00 0.00 37.44 2.44
6821 7538 7.507733 AGCAATGAAAAGATGGATGATAGAC 57.492 36.000 0.00 0.00 0.00 2.59
6834 7551 4.807304 GCACATATCCCAAGCAATGAAAAG 59.193 41.667 0.00 0.00 0.00 2.27


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.