Multiple sequence alignment - TraesCS2B01G011000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G011000 chr2B 100.000 2708 0 0 1 2708 5829772 5827065 0.000000e+00 5001.0
1 TraesCS2B01G011000 chr2D 94.845 1067 44 3 726 1788 5616512 5615453 0.000000e+00 1655.0
2 TraesCS2B01G011000 chr2D 84.524 420 42 18 2044 2453 5590609 5590203 7.030000e-106 394.0
3 TraesCS2B01G011000 chr2D 80.873 481 68 11 1194 1665 5643185 5642720 9.220000e-95 357.0
4 TraesCS2B01G011000 chr2D 85.294 238 26 6 2452 2683 5590085 5589851 1.250000e-58 237.0
5 TraesCS2B01G011000 chr2D 95.522 67 3 0 662 728 5616738 5616672 1.030000e-19 108.0
6 TraesCS2B01G011000 chr2A 90.185 866 26 11 726 1583 4143030 4142216 0.000000e+00 1074.0
7 TraesCS2B01G011000 chr2A 85.714 119 14 2 2253 2369 206854836 206854953 3.660000e-24 122.0
8 TraesCS2B01G011000 chr2A 83.846 130 19 2 2244 2371 401215708 401215579 3.660000e-24 122.0
9 TraesCS2B01G011000 chr2A 83.077 130 20 2 2244 2371 403183456 403183327 1.700000e-22 117.0
10 TraesCS2B01G011000 chr3D 78.775 702 99 28 3 686 429543444 429542775 2.490000e-115 425.0
11 TraesCS2B01G011000 chr6D 78.805 703 96 24 3 686 351912984 351912316 8.960000e-115 424.0
12 TraesCS2B01G011000 chr6D 85.915 142 15 5 645 782 351912331 351912191 2.170000e-31 147.0
13 TraesCS2B01G011000 chr6D 89.474 114 11 1 665 778 5929780 5929892 2.810000e-30 143.0
14 TraesCS2B01G011000 chr4A 76.987 843 114 45 11 803 380575601 380574789 2.510000e-110 409.0
15 TraesCS2B01G011000 chr1B 87.500 128 13 3 655 781 357445228 357445353 7.810000e-31 145.0
16 TraesCS2B01G011000 chr6A 86.154 130 16 2 2244 2371 153372885 153373014 3.640000e-29 139.0
17 TraesCS2B01G011000 chr4D 86.842 114 12 2 2246 2357 54795950 54796062 1.020000e-24 124.0
18 TraesCS2B01G011000 chr6B 83.721 129 19 2 2245 2371 129875963 129875835 1.320000e-23 121.0
19 TraesCS2B01G011000 chr3B 85.124 121 15 2 2253 2371 346612676 346612557 1.320000e-23 121.0
20 TraesCS2B01G011000 chr3B 83.077 130 19 2 2244 2371 246144715 246144843 6.130000e-22 115.0
21 TraesCS2B01G011000 chr1D 85.185 108 15 1 675 782 4275180 4275286 2.850000e-20 110.0
22 TraesCS2B01G011000 chr1A 90.385 52 4 1 2189 2239 394449368 394449317 1.740000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G011000 chr2B 5827065 5829772 2707 True 5001.0 5001 100.0000 1 2708 1 chr2B.!!$R1 2707
1 TraesCS2B01G011000 chr2D 5615453 5616738 1285 True 881.5 1655 95.1835 662 1788 2 chr2D.!!$R3 1126
2 TraesCS2B01G011000 chr2D 5589851 5590609 758 True 315.5 394 84.9090 2044 2683 2 chr2D.!!$R2 639
3 TraesCS2B01G011000 chr2A 4142216 4143030 814 True 1074.0 1074 90.1850 726 1583 1 chr2A.!!$R1 857
4 TraesCS2B01G011000 chr3D 429542775 429543444 669 True 425.0 425 78.7750 3 686 1 chr3D.!!$R1 683
5 TraesCS2B01G011000 chr6D 351912191 351912984 793 True 285.5 424 82.3600 3 782 2 chr6D.!!$R1 779
6 TraesCS2B01G011000 chr4A 380574789 380575601 812 True 409.0 409 76.9870 11 803 1 chr4A.!!$R1 792

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
36 37 0.703488 TTTCATCATGGTCCTGGCCA 59.297 50.000 4.71 4.71 43.48 5.36 F
49 50 1.295792 CTGGCCATGCATTCATTTGC 58.704 50.000 5.51 0.00 43.07 3.68 F
129 130 2.162681 CAGGGGCTCATTTTCTTCGTT 58.837 47.619 0.00 0.00 0.00 3.85 F
1504 1731 0.034767 CAAGGATCCTGCTTGCTCCA 60.035 55.000 17.02 0.00 38.90 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1133 1360 0.035439 GGTCACCACCACCACTATGG 60.035 60.0 0.00 0.0 43.17 2.74 R
1134 1361 0.035439 GGGTCACCACCACCACTATG 60.035 60.0 0.00 0.0 45.94 2.23 R
1584 1811 0.036952 AGCAGTCCATGTCTTGGTCG 60.037 55.0 4.76 0.0 46.52 4.79 R
2683 3045 0.179111 CGACGGCAAATGGAGCTAGA 60.179 55.0 0.00 0.0 0.00 2.43 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 3.103738 GCGTGCTTAGCTTTTCATCATG 58.896 45.455 5.60 0.00 0.00 3.07
33 34 2.731572 AGCTTTTCATCATGGTCCTGG 58.268 47.619 0.00 0.00 0.00 4.45
34 35 1.135721 GCTTTTCATCATGGTCCTGGC 59.864 52.381 0.00 0.00 0.00 4.85
35 36 1.753073 CTTTTCATCATGGTCCTGGCC 59.247 52.381 0.00 0.00 0.00 5.36
36 37 0.703488 TTTCATCATGGTCCTGGCCA 59.297 50.000 4.71 4.71 43.48 5.36
49 50 1.295792 CTGGCCATGCATTCATTTGC 58.704 50.000 5.51 0.00 43.07 3.68
70 71 4.644685 TGCTTTATTATTGGGCTGACCTTC 59.355 41.667 0.00 0.00 41.11 3.46
72 73 6.062095 GCTTTATTATTGGGCTGACCTTCTA 58.938 40.000 0.00 0.00 41.11 2.10
82 83 5.083821 GGGCTGACCTTCTATCTATCTCTT 58.916 45.833 0.00 0.00 35.85 2.85
85 86 6.266558 GGCTGACCTTCTATCTATCTCTTTCA 59.733 42.308 0.00 0.00 0.00 2.69
86 87 7.039082 GGCTGACCTTCTATCTATCTCTTTCAT 60.039 40.741 0.00 0.00 0.00 2.57
102 103 8.146053 TCTCTTTCATAAATCAAGACCCTGTA 57.854 34.615 0.00 0.00 0.00 2.74
126 127 8.951243 GTAATATATCAGGGGCTCATTTTCTTC 58.049 37.037 0.00 0.00 0.00 2.87
129 130 2.162681 CAGGGGCTCATTTTCTTCGTT 58.837 47.619 0.00 0.00 0.00 3.85
132 133 3.255888 AGGGGCTCATTTTCTTCGTTTTC 59.744 43.478 0.00 0.00 0.00 2.29
155 156 5.833131 TCTATTGCAGAAATTTGGGGGTATC 59.167 40.000 0.00 0.00 0.00 2.24
161 162 5.163550 GCAGAAATTTGGGGGTATCTAACAC 60.164 44.000 0.00 0.00 0.00 3.32
163 164 6.095440 CAGAAATTTGGGGGTATCTAACACAG 59.905 42.308 0.00 0.00 30.67 3.66
167 168 4.069312 TGGGGGTATCTAACACAGAAGA 57.931 45.455 0.00 0.00 36.67 2.87
168 169 4.431378 TGGGGGTATCTAACACAGAAGAA 58.569 43.478 0.00 0.00 36.67 2.52
184 194 8.616076 ACACAGAAGAAAAGTTCAACTGATTAG 58.384 33.333 15.82 0.00 37.97 1.73
185 195 8.616076 CACAGAAGAAAAGTTCAACTGATTAGT 58.384 33.333 15.82 0.00 37.97 2.24
187 197 9.657121 CAGAAGAAAAGTTCAACTGATTAGTTC 57.343 33.333 0.00 0.00 45.12 3.01
188 198 9.620259 AGAAGAAAAGTTCAACTGATTAGTTCT 57.380 29.630 0.00 0.18 45.12 3.01
191 201 9.396022 AGAAAAGTTCAACTGATTAGTTCTTGA 57.604 29.630 0.00 0.00 45.12 3.02
197 207 6.913170 TCAACTGATTAGTTCTTGAATTGGC 58.087 36.000 0.00 0.00 45.12 4.52
205 215 4.634199 AGTTCTTGAATTGGCAACCATTG 58.366 39.130 0.00 0.99 31.53 2.82
251 269 9.903682 GACAATCTATCCATTTGTTCAATATGG 57.096 33.333 14.51 14.51 40.14 2.74
269 287 2.495155 GGCTTTGAATGCCCCAAATT 57.505 45.000 10.73 0.00 44.32 1.82
286 306 9.923143 GCCCCAAATTAATTAATTATAGTCCAC 57.077 33.333 20.90 5.86 35.00 4.02
346 366 5.050363 TGCAACTAAGCAAGTAGAAACTTCG 60.050 40.000 0.00 0.00 44.28 3.79
354 374 4.023963 GCAAGTAGAAACTTCGCTTCCTTT 60.024 41.667 0.00 0.00 44.28 3.11
359 379 4.646572 AGAAACTTCGCTTCCTTTCAGAT 58.353 39.130 0.00 0.00 0.00 2.90
360 380 5.066593 AGAAACTTCGCTTCCTTTCAGATT 58.933 37.500 0.00 0.00 0.00 2.40
363 383 6.877611 AACTTCGCTTCCTTTCAGATTTTA 57.122 33.333 0.00 0.00 0.00 1.52
365 385 6.669278 ACTTCGCTTCCTTTCAGATTTTAAC 58.331 36.000 0.00 0.00 0.00 2.01
366 386 6.262273 ACTTCGCTTCCTTTCAGATTTTAACA 59.738 34.615 0.00 0.00 0.00 2.41
367 387 5.997385 TCGCTTCCTTTCAGATTTTAACAC 58.003 37.500 0.00 0.00 0.00 3.32
368 388 5.529430 TCGCTTCCTTTCAGATTTTAACACA 59.471 36.000 0.00 0.00 0.00 3.72
369 389 5.625311 CGCTTCCTTTCAGATTTTAACACAC 59.375 40.000 0.00 0.00 0.00 3.82
370 390 5.625311 GCTTCCTTTCAGATTTTAACACACG 59.375 40.000 0.00 0.00 0.00 4.49
371 391 6.687081 TTCCTTTCAGATTTTAACACACGT 57.313 33.333 0.00 0.00 0.00 4.49
382 403 8.126700 AGATTTTAACACACGTTTTTCTACCTG 58.873 33.333 0.00 0.00 36.52 4.00
388 409 5.642919 ACACACGTTTTTCTACCTGTGTTTA 59.357 36.000 0.00 0.00 41.96 2.01
392 413 7.022384 CACGTTTTTCTACCTGTGTTTAACAA 58.978 34.615 0.00 0.00 38.67 2.83
401 422 5.591099 ACCTGTGTTTAACAATTTGCAGAG 58.409 37.500 12.30 6.81 38.67 3.35
403 424 5.459762 CCTGTGTTTAACAATTTGCAGAGTG 59.540 40.000 12.30 2.80 38.67 3.51
410 431 4.032703 ACAATTTGCAGAGTGTGTTCAC 57.967 40.909 9.73 0.00 44.15 3.18
424 445 6.903883 GTGTGTTCACTCTCTTTTTAGTCA 57.096 37.500 4.59 0.00 40.98 3.41
425 446 6.938542 GTGTGTTCACTCTCTTTTTAGTCAG 58.061 40.000 4.59 0.00 40.98 3.51
447 468 5.882557 CAGGTTATGTAATGCTCCAAAGAGT 59.117 40.000 0.00 0.00 42.59 3.24
450 471 3.423539 TGTAATGCTCCAAAGAGTGCT 57.576 42.857 0.00 0.00 42.59 4.40
454 475 5.945784 TGTAATGCTCCAAAGAGTGCTATTT 59.054 36.000 0.00 0.00 42.59 1.40
499 521 9.453572 AATATGAAAGTTCATGTACAGTGATGT 57.546 29.630 15.30 0.00 46.68 3.06
500 522 6.544038 TGAAAGTTCATGTACAGTGATGTG 57.456 37.500 0.33 0.00 31.01 3.21
501 523 6.054941 TGAAAGTTCATGTACAGTGATGTGT 58.945 36.000 0.33 0.00 31.01 3.72
502 524 6.542005 TGAAAGTTCATGTACAGTGATGTGTT 59.458 34.615 0.33 0.00 31.01 3.32
503 525 7.713073 TGAAAGTTCATGTACAGTGATGTGTTA 59.287 33.333 0.33 0.00 31.01 2.41
504 526 7.658179 AAGTTCATGTACAGTGATGTGTTAG 57.342 36.000 0.33 0.00 31.46 2.34
505 527 6.759272 AGTTCATGTACAGTGATGTGTTAGT 58.241 36.000 0.33 0.00 31.46 2.24
506 528 7.217200 AGTTCATGTACAGTGATGTGTTAGTT 58.783 34.615 0.33 0.00 31.46 2.24
507 529 7.715249 AGTTCATGTACAGTGATGTGTTAGTTT 59.285 33.333 0.33 0.00 31.46 2.66
545 571 5.554822 TTACCTTAATGATCGGTGCAAAC 57.445 39.130 0.00 0.00 32.36 2.93
546 572 2.752903 ACCTTAATGATCGGTGCAAACC 59.247 45.455 0.00 0.00 0.00 3.27
602 628 9.821662 CATATTGTACATGCTGAATTGATAGTG 57.178 33.333 0.00 0.00 0.00 2.74
605 631 7.686438 TGTACATGCTGAATTGATAGTGTTT 57.314 32.000 0.00 0.00 0.00 2.83
607 633 8.236586 TGTACATGCTGAATTGATAGTGTTTTC 58.763 33.333 0.00 0.00 0.00 2.29
613 639 7.148188 TGCTGAATTGATAGTGTTTTCATCTCC 60.148 37.037 0.00 0.00 0.00 3.71
615 641 8.812513 TGAATTGATAGTGTTTTCATCTCCAT 57.187 30.769 0.00 0.00 0.00 3.41
617 643 8.812513 AATTGATAGTGTTTTCATCTCCATCA 57.187 30.769 0.00 0.00 0.00 3.07
627 653 7.701924 TGTTTTCATCTCCATCATAAAATTCGC 59.298 33.333 0.00 0.00 0.00 4.70
639 665 3.918253 AATTCGCGCCCCTCAGCAA 62.918 57.895 0.00 0.00 0.00 3.91
644 670 2.592861 CGCCCCTCAGCAATAGCC 60.593 66.667 0.00 0.00 43.56 3.93
655 681 6.832384 CCCTCAGCAATAGCCATGATTATATT 59.168 38.462 0.00 0.00 43.56 1.28
841 1068 7.015226 TCATGTGCAATTTACTAGTATGTGC 57.985 36.000 18.91 18.91 0.00 4.57
928 1155 5.178067 GCAACAAATTTGGCATATATGGAGC 59.822 40.000 21.74 0.00 0.00 4.70
935 1162 9.979897 AAATTTGGCATATATGGAGCTCTAATA 57.020 29.630 14.64 12.28 0.00 0.98
957 1184 4.907809 AGATCATGGCCTCACAATCATAG 58.092 43.478 3.32 0.00 0.00 2.23
1031 1258 5.467035 TGGCATATATCTCGATCAACACA 57.533 39.130 0.00 0.00 0.00 3.72
1134 1361 4.477975 CTCGTCGTCGCCCTCACC 62.478 72.222 0.00 0.00 36.96 4.02
1136 1363 4.129737 CGTCGTCGCCCTCACCAT 62.130 66.667 0.00 0.00 0.00 3.55
1137 1364 2.767445 CGTCGTCGCCCTCACCATA 61.767 63.158 0.00 0.00 0.00 2.74
1162 1389 4.597796 TGGTGACCCCATCATCCA 57.402 55.556 0.00 0.00 37.69 3.41
1266 1493 4.758251 TGCGCCACCATGGTCGAG 62.758 66.667 25.47 18.06 40.46 4.04
1350 1577 2.126850 GTCGGCCAAAAGAAGCGC 60.127 61.111 2.24 0.00 0.00 5.92
1353 1580 2.176792 GGCCAAAAGAAGCGCGAG 59.823 61.111 12.10 0.00 0.00 5.03
1356 1583 1.497722 CCAAAAGAAGCGCGAGTCC 59.502 57.895 12.10 0.00 0.00 3.85
1504 1731 0.034767 CAAGGATCCTGCTTGCTCCA 60.035 55.000 17.02 0.00 38.90 3.86
1578 1805 2.115266 ACCCCGGCCAACAAGAAG 59.885 61.111 2.24 0.00 0.00 2.85
1586 1813 0.960364 GCCAACAAGAAGGCCATCGA 60.960 55.000 5.01 0.00 45.18 3.59
1587 1814 0.804989 CCAACAAGAAGGCCATCGAC 59.195 55.000 5.01 0.00 0.00 4.20
1588 1815 0.804989 CAACAAGAAGGCCATCGACC 59.195 55.000 5.01 0.00 0.00 4.79
1614 1841 1.081840 GGACTGCTTCAAGCGTTGC 60.082 57.895 4.57 0.00 46.26 4.17
1650 1877 1.238439 CCACGAATGACAAGTGCCTT 58.762 50.000 0.00 0.00 34.79 4.35
1686 1913 1.258445 TTTCTCCTGCCCTCGTCTCC 61.258 60.000 0.00 0.00 0.00 3.71
1719 1950 2.548904 TGCCACTTGAAAATGCATTTGC 59.451 40.909 24.74 23.05 42.50 3.68
1731 1962 7.276878 TGAAAATGCATTTGCTCTACATTCATG 59.723 33.333 26.80 0.00 42.66 3.07
1734 1965 6.756299 TGCATTTGCTCTACATTCATGTTA 57.244 33.333 3.94 0.00 40.92 2.41
1763 1994 7.283354 ACATGTACTCATATCTCGACTCAAAGA 59.717 37.037 0.00 0.00 32.47 2.52
1765 1996 8.226819 TGTACTCATATCTCGACTCAAAGAAT 57.773 34.615 0.00 0.00 0.00 2.40
1798 2029 8.965819 TGTATTCATATCTCTCCTTATCTGAGC 58.034 37.037 0.00 0.00 0.00 4.26
1799 2030 9.189156 GTATTCATATCTCTCCTTATCTGAGCT 57.811 37.037 0.00 0.00 0.00 4.09
1800 2031 8.669055 ATTCATATCTCTCCTTATCTGAGCTT 57.331 34.615 0.00 0.00 0.00 3.74
1801 2032 8.489676 TTCATATCTCTCCTTATCTGAGCTTT 57.510 34.615 0.00 0.00 0.00 3.51
1802 2033 8.489676 TCATATCTCTCCTTATCTGAGCTTTT 57.510 34.615 0.00 0.00 0.00 2.27
1803 2034 8.584157 TCATATCTCTCCTTATCTGAGCTTTTC 58.416 37.037 0.00 0.00 0.00 2.29
1804 2035 8.587608 CATATCTCTCCTTATCTGAGCTTTTCT 58.412 37.037 0.00 0.00 0.00 2.52
1805 2036 6.865834 TCTCTCCTTATCTGAGCTTTTCTT 57.134 37.500 0.00 0.00 0.00 2.52
1806 2037 6.872920 TCTCTCCTTATCTGAGCTTTTCTTC 58.127 40.000 0.00 0.00 0.00 2.87
1807 2038 6.667414 TCTCTCCTTATCTGAGCTTTTCTTCT 59.333 38.462 0.00 0.00 0.00 2.85
1808 2039 7.836685 TCTCTCCTTATCTGAGCTTTTCTTCTA 59.163 37.037 0.00 0.00 0.00 2.10
1809 2040 8.546083 TCTCCTTATCTGAGCTTTTCTTCTAT 57.454 34.615 0.00 0.00 0.00 1.98
1810 2041 8.420222 TCTCCTTATCTGAGCTTTTCTTCTATG 58.580 37.037 0.00 0.00 0.00 2.23
1811 2042 7.504403 TCCTTATCTGAGCTTTTCTTCTATGG 58.496 38.462 0.00 0.00 0.00 2.74
1812 2043 6.204495 CCTTATCTGAGCTTTTCTTCTATGGC 59.796 42.308 0.00 0.00 0.00 4.40
1813 2044 3.525537 TCTGAGCTTTTCTTCTATGGCG 58.474 45.455 0.00 0.00 0.00 5.69
1814 2045 3.195610 TCTGAGCTTTTCTTCTATGGCGA 59.804 43.478 0.00 0.00 0.00 5.54
1815 2046 3.525537 TGAGCTTTTCTTCTATGGCGAG 58.474 45.455 0.00 0.00 0.00 5.03
1816 2047 3.195610 TGAGCTTTTCTTCTATGGCGAGA 59.804 43.478 0.00 0.00 0.00 4.04
1817 2048 4.141846 TGAGCTTTTCTTCTATGGCGAGAT 60.142 41.667 0.00 0.00 0.00 2.75
1818 2049 4.125703 AGCTTTTCTTCTATGGCGAGATG 58.874 43.478 0.00 0.00 0.00 2.90
1819 2050 3.249559 GCTTTTCTTCTATGGCGAGATGG 59.750 47.826 0.00 0.00 0.00 3.51
1820 2051 4.446371 CTTTTCTTCTATGGCGAGATGGT 58.554 43.478 0.00 0.00 0.00 3.55
1821 2052 3.459232 TTCTTCTATGGCGAGATGGTG 57.541 47.619 0.00 0.00 0.00 4.17
1822 2053 1.688735 TCTTCTATGGCGAGATGGTGG 59.311 52.381 0.00 0.00 0.00 4.61
1823 2054 1.688735 CTTCTATGGCGAGATGGTGGA 59.311 52.381 0.00 0.00 0.00 4.02
1824 2055 1.332195 TCTATGGCGAGATGGTGGAG 58.668 55.000 0.00 0.00 0.00 3.86
1825 2056 0.319728 CTATGGCGAGATGGTGGAGG 59.680 60.000 0.00 0.00 0.00 4.30
1826 2057 0.105709 TATGGCGAGATGGTGGAGGA 60.106 55.000 0.00 0.00 0.00 3.71
1827 2058 0.765903 ATGGCGAGATGGTGGAGGAT 60.766 55.000 0.00 0.00 0.00 3.24
1828 2059 1.369321 GGCGAGATGGTGGAGGATC 59.631 63.158 0.00 0.00 0.00 3.36
1847 2078 2.126657 GCGGCGGCGAATTTTTGA 60.127 55.556 36.87 0.00 0.00 2.69
1848 2079 2.152078 GCGGCGGCGAATTTTTGAG 61.152 57.895 36.87 1.60 0.00 3.02
1849 2080 1.514014 CGGCGGCGAATTTTTGAGG 60.514 57.895 29.19 0.00 0.00 3.86
1850 2081 1.153842 GGCGGCGAATTTTTGAGGG 60.154 57.895 12.98 0.00 0.00 4.30
1851 2082 1.591504 GGCGGCGAATTTTTGAGGGA 61.592 55.000 12.98 0.00 0.00 4.20
1852 2083 0.179163 GCGGCGAATTTTTGAGGGAG 60.179 55.000 12.98 0.00 0.00 4.30
1853 2084 1.448985 CGGCGAATTTTTGAGGGAGA 58.551 50.000 0.00 0.00 0.00 3.71
1854 2085 1.398390 CGGCGAATTTTTGAGGGAGAG 59.602 52.381 0.00 0.00 0.00 3.20
1855 2086 2.711542 GGCGAATTTTTGAGGGAGAGA 58.288 47.619 0.00 0.00 0.00 3.10
1856 2087 2.680339 GGCGAATTTTTGAGGGAGAGAG 59.320 50.000 0.00 0.00 0.00 3.20
1857 2088 3.600388 GCGAATTTTTGAGGGAGAGAGA 58.400 45.455 0.00 0.00 0.00 3.10
1858 2089 4.195416 GCGAATTTTTGAGGGAGAGAGAT 58.805 43.478 0.00 0.00 0.00 2.75
1859 2090 4.034975 GCGAATTTTTGAGGGAGAGAGATG 59.965 45.833 0.00 0.00 0.00 2.90
1860 2091 5.181748 CGAATTTTTGAGGGAGAGAGATGT 58.818 41.667 0.00 0.00 0.00 3.06
1861 2092 5.064452 CGAATTTTTGAGGGAGAGAGATGTG 59.936 44.000 0.00 0.00 0.00 3.21
1862 2093 5.768980 ATTTTTGAGGGAGAGAGATGTGA 57.231 39.130 0.00 0.00 0.00 3.58
1863 2094 5.768980 TTTTTGAGGGAGAGAGATGTGAT 57.231 39.130 0.00 0.00 0.00 3.06
1864 2095 6.874278 TTTTTGAGGGAGAGAGATGTGATA 57.126 37.500 0.00 0.00 0.00 2.15
1865 2096 6.477053 TTTTGAGGGAGAGAGATGTGATAG 57.523 41.667 0.00 0.00 0.00 2.08
1866 2097 4.111255 TGAGGGAGAGAGATGTGATAGG 57.889 50.000 0.00 0.00 0.00 2.57
1867 2098 3.181424 TGAGGGAGAGAGATGTGATAGGG 60.181 52.174 0.00 0.00 0.00 3.53
1868 2099 3.067470 AGGGAGAGAGATGTGATAGGGA 58.933 50.000 0.00 0.00 0.00 4.20
1869 2100 3.075882 AGGGAGAGAGATGTGATAGGGAG 59.924 52.174 0.00 0.00 0.00 4.30
1870 2101 3.430453 GGAGAGAGATGTGATAGGGAGG 58.570 54.545 0.00 0.00 0.00 4.30
1871 2102 3.075283 GGAGAGAGATGTGATAGGGAGGA 59.925 52.174 0.00 0.00 0.00 3.71
1872 2103 4.448493 GGAGAGAGATGTGATAGGGAGGAA 60.448 50.000 0.00 0.00 0.00 3.36
1873 2104 4.739793 AGAGAGATGTGATAGGGAGGAAG 58.260 47.826 0.00 0.00 0.00 3.46
1874 2105 3.831911 GAGAGATGTGATAGGGAGGAAGG 59.168 52.174 0.00 0.00 0.00 3.46
1875 2106 2.903135 GAGATGTGATAGGGAGGAAGGG 59.097 54.545 0.00 0.00 0.00 3.95
1876 2107 1.981495 GATGTGATAGGGAGGAAGGGG 59.019 57.143 0.00 0.00 0.00 4.79
1877 2108 0.722676 TGTGATAGGGAGGAAGGGGT 59.277 55.000 0.00 0.00 0.00 4.95
1878 2109 1.082194 TGTGATAGGGAGGAAGGGGTT 59.918 52.381 0.00 0.00 0.00 4.11
1879 2110 1.490910 GTGATAGGGAGGAAGGGGTTG 59.509 57.143 0.00 0.00 0.00 3.77
1880 2111 0.474614 GATAGGGAGGAAGGGGTTGC 59.525 60.000 0.00 0.00 0.00 4.17
1881 2112 1.345715 ATAGGGAGGAAGGGGTTGCG 61.346 60.000 0.00 0.00 0.00 4.85
1882 2113 4.426313 GGGAGGAAGGGGTTGCGG 62.426 72.222 0.00 0.00 0.00 5.69
1883 2114 4.426313 GGAGGAAGGGGTTGCGGG 62.426 72.222 0.00 0.00 0.00 6.13
1884 2115 3.327404 GAGGAAGGGGTTGCGGGA 61.327 66.667 0.00 0.00 0.00 5.14
1885 2116 3.330720 AGGAAGGGGTTGCGGGAG 61.331 66.667 0.00 0.00 0.00 4.30
1886 2117 3.327404 GGAAGGGGTTGCGGGAGA 61.327 66.667 0.00 0.00 0.00 3.71
1887 2118 2.680370 GGAAGGGGTTGCGGGAGAT 61.680 63.158 0.00 0.00 0.00 2.75
1888 2119 1.452108 GAAGGGGTTGCGGGAGATG 60.452 63.158 0.00 0.00 0.00 2.90
1889 2120 2.893682 GAAGGGGTTGCGGGAGATGG 62.894 65.000 0.00 0.00 0.00 3.51
1890 2121 4.506255 GGGGTTGCGGGAGATGGG 62.506 72.222 0.00 0.00 0.00 4.00
1891 2122 4.506255 GGGTTGCGGGAGATGGGG 62.506 72.222 0.00 0.00 0.00 4.96
1892 2123 4.506255 GGTTGCGGGAGATGGGGG 62.506 72.222 0.00 0.00 0.00 5.40
1896 2127 4.962836 GCGGGAGATGGGGGCATG 62.963 72.222 0.00 0.00 0.00 4.06
1897 2128 4.275508 CGGGAGATGGGGGCATGG 62.276 72.222 0.00 0.00 0.00 3.66
1898 2129 2.778278 GGGAGATGGGGGCATGGA 60.778 66.667 0.00 0.00 0.00 3.41
1899 2130 2.394506 GGGAGATGGGGGCATGGAA 61.395 63.158 0.00 0.00 0.00 3.53
1900 2131 1.152673 GGAGATGGGGGCATGGAAC 60.153 63.158 0.00 0.00 0.00 3.62
1938 2169 8.717821 TCTTTTTAAATTCGTGTGTATCAGAGG 58.282 33.333 0.00 0.00 0.00 3.69
1939 2170 7.972832 TTTTAAATTCGTGTGTATCAGAGGT 57.027 32.000 0.00 0.00 0.00 3.85
1940 2171 9.491675 TTTTTAAATTCGTGTGTATCAGAGGTA 57.508 29.630 0.00 0.00 0.00 3.08
1941 2172 8.697846 TTTAAATTCGTGTGTATCAGAGGTAG 57.302 34.615 0.00 0.00 0.00 3.18
1942 2173 4.920640 ATTCGTGTGTATCAGAGGTAGG 57.079 45.455 0.00 0.00 0.00 3.18
1943 2174 2.651455 TCGTGTGTATCAGAGGTAGGG 58.349 52.381 0.00 0.00 0.00 3.53
1944 2175 2.025605 TCGTGTGTATCAGAGGTAGGGT 60.026 50.000 0.00 0.00 0.00 4.34
1945 2176 2.099263 CGTGTGTATCAGAGGTAGGGTG 59.901 54.545 0.00 0.00 0.00 4.61
1946 2177 3.362706 GTGTGTATCAGAGGTAGGGTGA 58.637 50.000 0.00 0.00 0.00 4.02
1947 2178 3.381908 GTGTGTATCAGAGGTAGGGTGAG 59.618 52.174 0.00 0.00 0.00 3.51
1948 2179 3.011369 TGTGTATCAGAGGTAGGGTGAGT 59.989 47.826 0.00 0.00 0.00 3.41
1949 2180 3.633065 GTGTATCAGAGGTAGGGTGAGTC 59.367 52.174 0.00 0.00 0.00 3.36
1950 2181 3.268595 TGTATCAGAGGTAGGGTGAGTCA 59.731 47.826 0.00 0.00 0.00 3.41
1951 2182 2.217510 TCAGAGGTAGGGTGAGTCAC 57.782 55.000 15.24 15.24 0.00 3.67
1952 2183 0.811915 CAGAGGTAGGGTGAGTCACG 59.188 60.000 16.89 0.00 34.83 4.35
1953 2184 0.966370 AGAGGTAGGGTGAGTCACGC 60.966 60.000 27.92 27.92 45.64 5.34
1962 2193 4.436998 GAGTCACGCGGGGTGGAG 62.437 72.222 22.77 0.20 46.96 3.86
1970 2201 4.764771 CGGGGTGGAGGGACCGTA 62.765 72.222 0.00 0.00 41.34 4.02
1971 2202 3.079478 GGGGTGGAGGGACCGTAC 61.079 72.222 0.00 0.00 42.61 3.67
1972 2203 2.284112 GGGTGGAGGGACCGTACA 60.284 66.667 0.00 0.00 42.61 2.90
1973 2204 1.688187 GGGTGGAGGGACCGTACAT 60.688 63.158 1.60 0.00 42.61 2.29
1974 2205 1.520666 GGTGGAGGGACCGTACATG 59.479 63.158 1.60 0.00 42.61 3.21
1975 2206 1.262640 GGTGGAGGGACCGTACATGT 61.263 60.000 1.60 2.69 42.61 3.21
1976 2207 0.108329 GTGGAGGGACCGTACATGTG 60.108 60.000 9.11 0.00 42.61 3.21
1977 2208 1.261938 TGGAGGGACCGTACATGTGG 61.262 60.000 9.11 4.43 42.61 4.17
1978 2209 0.974010 GGAGGGACCGTACATGTGGA 60.974 60.000 9.11 0.00 0.00 4.02
1979 2210 0.460311 GAGGGACCGTACATGTGGAG 59.540 60.000 9.11 0.00 0.00 3.86
1980 2211 0.976073 AGGGACCGTACATGTGGAGG 60.976 60.000 9.11 11.28 0.00 4.30
1981 2212 1.520666 GGACCGTACATGTGGAGGG 59.479 63.158 9.11 7.22 0.00 4.30
1982 2213 1.520666 GACCGTACATGTGGAGGGG 59.479 63.158 9.11 4.86 0.00 4.79
1983 2214 1.968050 GACCGTACATGTGGAGGGGG 61.968 65.000 9.11 3.07 0.00 5.40
1984 2215 1.993391 CCGTACATGTGGAGGGGGT 60.993 63.158 9.11 0.00 0.00 4.95
1985 2216 1.520666 CGTACATGTGGAGGGGGTC 59.479 63.158 9.11 0.00 0.00 4.46
1986 2217 1.520666 GTACATGTGGAGGGGGTCG 59.479 63.158 9.11 0.00 0.00 4.79
1987 2218 0.974010 GTACATGTGGAGGGGGTCGA 60.974 60.000 9.11 0.00 0.00 4.20
1988 2219 0.252330 TACATGTGGAGGGGGTCGAA 60.252 55.000 9.11 0.00 0.00 3.71
1989 2220 1.078426 CATGTGGAGGGGGTCGAAC 60.078 63.158 0.00 0.00 0.00 3.95
1990 2221 2.298661 ATGTGGAGGGGGTCGAACC 61.299 63.158 12.37 12.37 37.60 3.62
1991 2222 2.926242 GTGGAGGGGGTCGAACCA 60.926 66.667 23.64 0.00 41.02 3.67
1992 2223 2.124085 TGGAGGGGGTCGAACCAT 59.876 61.111 23.64 9.35 41.02 3.55
1993 2224 1.993391 TGGAGGGGGTCGAACCATC 60.993 63.158 23.64 18.19 41.02 3.51
1994 2225 1.993391 GGAGGGGGTCGAACCATCA 60.993 63.158 23.64 0.00 41.02 3.07
1995 2226 1.522569 GAGGGGGTCGAACCATCAG 59.477 63.158 23.64 0.00 41.02 2.90
1996 2227 1.972660 GAGGGGGTCGAACCATCAGG 61.973 65.000 23.64 0.00 41.02 3.86
1997 2228 1.993391 GGGGGTCGAACCATCAGGA 60.993 63.158 23.64 0.00 41.02 3.86
1998 2229 1.221021 GGGGTCGAACCATCAGGAC 59.779 63.158 23.64 0.00 41.02 3.85
1999 2230 1.153628 GGGTCGAACCATCAGGACG 60.154 63.158 16.61 0.00 41.02 4.79
2000 2231 1.601419 GGGTCGAACCATCAGGACGA 61.601 60.000 16.61 0.00 41.02 4.20
2002 2233 1.504900 TCGAACCATCAGGACGACG 59.495 57.895 0.00 0.00 40.14 5.12
2003 2234 0.956902 TCGAACCATCAGGACGACGA 60.957 55.000 0.00 0.00 40.14 4.20
2004 2235 0.797249 CGAACCATCAGGACGACGAC 60.797 60.000 0.00 0.00 39.22 4.34
2005 2236 0.242825 GAACCATCAGGACGACGACA 59.757 55.000 0.00 0.00 38.69 4.35
2006 2237 0.677288 AACCATCAGGACGACGACAA 59.323 50.000 0.00 0.00 38.69 3.18
2007 2238 0.038526 ACCATCAGGACGACGACAAC 60.039 55.000 0.00 0.00 38.69 3.32
2008 2239 0.038618 CCATCAGGACGACGACAACA 60.039 55.000 0.00 0.00 36.89 3.33
2009 2240 1.604438 CCATCAGGACGACGACAACAA 60.604 52.381 0.00 0.00 36.89 2.83
2010 2241 1.455786 CATCAGGACGACGACAACAAC 59.544 52.381 0.00 0.00 0.00 3.32
2011 2242 0.593008 TCAGGACGACGACAACAACG 60.593 55.000 0.00 0.00 0.00 4.10
2012 2243 0.593008 CAGGACGACGACAACAACGA 60.593 55.000 0.00 0.00 34.70 3.85
2013 2244 0.593263 AGGACGACGACAACAACGAC 60.593 55.000 0.00 0.00 34.70 4.34
2014 2245 1.543106 GGACGACGACAACAACGACC 61.543 60.000 0.00 0.00 34.36 4.79
2015 2246 1.859047 GACGACGACAACAACGACCG 61.859 60.000 0.00 0.00 36.86 4.79
2016 2247 2.542896 GACGACAACAACGACCGC 59.457 61.111 0.00 0.00 34.70 5.68
2017 2248 2.202770 ACGACAACAACGACCGCA 60.203 55.556 0.00 0.00 34.70 5.69
2018 2249 1.554042 GACGACAACAACGACCGCAT 61.554 55.000 0.00 0.00 34.70 4.73
2019 2250 0.318869 ACGACAACAACGACCGCATA 60.319 50.000 0.00 0.00 34.70 3.14
2020 2251 0.996462 CGACAACAACGACCGCATAT 59.004 50.000 0.00 0.00 0.00 1.78
2021 2252 1.006391 CGACAACAACGACCGCATATC 60.006 52.381 0.00 0.00 0.00 1.63
2022 2253 1.326548 GACAACAACGACCGCATATCC 59.673 52.381 0.00 0.00 0.00 2.59
2023 2254 0.655733 CAACAACGACCGCATATCCC 59.344 55.000 0.00 0.00 0.00 3.85
2024 2255 0.463116 AACAACGACCGCATATCCCC 60.463 55.000 0.00 0.00 0.00 4.81
2025 2256 1.597027 CAACGACCGCATATCCCCC 60.597 63.158 0.00 0.00 0.00 5.40
2026 2257 1.764854 AACGACCGCATATCCCCCT 60.765 57.895 0.00 0.00 0.00 4.79
2027 2258 1.342672 AACGACCGCATATCCCCCTT 61.343 55.000 0.00 0.00 0.00 3.95
2028 2259 1.342672 ACGACCGCATATCCCCCTTT 61.343 55.000 0.00 0.00 0.00 3.11
2029 2260 0.682852 CGACCGCATATCCCCCTTTA 59.317 55.000 0.00 0.00 0.00 1.85
2030 2261 1.071071 CGACCGCATATCCCCCTTTAA 59.929 52.381 0.00 0.00 0.00 1.52
2031 2262 2.779506 GACCGCATATCCCCCTTTAAG 58.220 52.381 0.00 0.00 0.00 1.85
2032 2263 2.105993 GACCGCATATCCCCCTTTAAGT 59.894 50.000 0.00 0.00 0.00 2.24
2033 2264 3.320129 ACCGCATATCCCCCTTTAAGTA 58.680 45.455 0.00 0.00 0.00 2.24
2034 2265 3.326880 ACCGCATATCCCCCTTTAAGTAG 59.673 47.826 0.00 0.00 0.00 2.57
2035 2266 3.326880 CCGCATATCCCCCTTTAAGTAGT 59.673 47.826 0.00 0.00 0.00 2.73
2036 2267 4.529377 CCGCATATCCCCCTTTAAGTAGTA 59.471 45.833 0.00 0.00 0.00 1.82
2037 2268 5.337330 CCGCATATCCCCCTTTAAGTAGTAG 60.337 48.000 0.00 0.00 0.00 2.57
2038 2269 5.479375 CGCATATCCCCCTTTAAGTAGTAGA 59.521 44.000 0.00 0.00 0.00 2.59
2039 2270 6.350277 CGCATATCCCCCTTTAAGTAGTAGAG 60.350 46.154 0.00 0.00 0.00 2.43
2040 2271 6.724905 GCATATCCCCCTTTAAGTAGTAGAGA 59.275 42.308 0.00 0.00 0.00 3.10
2041 2272 7.234988 GCATATCCCCCTTTAAGTAGTAGAGAA 59.765 40.741 0.00 0.00 0.00 2.87
2042 2273 8.808092 CATATCCCCCTTTAAGTAGTAGAGAAG 58.192 40.741 0.00 0.00 0.00 2.85
2079 2310 7.987268 TGTTGTCTAATTACGCAGAGAATAG 57.013 36.000 0.00 0.00 0.00 1.73
2147 2378 7.886338 ACTTCTGGATAATGGTCTTTTCAAAC 58.114 34.615 0.00 0.00 0.00 2.93
2176 2407 8.899427 AATAGTTGATTCGATGATGACTGAAT 57.101 30.769 0.00 0.00 33.96 2.57
2182 2413 6.259387 TGATTCGATGATGACTGAATTCTTGG 59.741 38.462 7.05 0.00 31.56 3.61
2191 2422 6.121776 TGACTGAATTCTTGGCCTACTTTA 57.878 37.500 3.32 0.00 0.00 1.85
2192 2423 6.539173 TGACTGAATTCTTGGCCTACTTTAA 58.461 36.000 3.32 0.00 0.00 1.52
2193 2424 7.175104 TGACTGAATTCTTGGCCTACTTTAAT 58.825 34.615 3.32 0.00 0.00 1.40
2208 2439 7.148289 GCCTACTTTAATTACAACCTCCAACTC 60.148 40.741 0.00 0.00 0.00 3.01
2209 2440 7.336176 CCTACTTTAATTACAACCTCCAACTCC 59.664 40.741 0.00 0.00 0.00 3.85
2215 2446 2.384828 ACAACCTCCAACTCCAAAACC 58.615 47.619 0.00 0.00 0.00 3.27
2222 2453 2.173143 TCCAACTCCAAAACCGGTTAGT 59.827 45.455 22.60 17.41 0.00 2.24
2223 2454 3.390639 TCCAACTCCAAAACCGGTTAGTA 59.609 43.478 22.60 5.84 0.00 1.82
2236 2467 5.056480 ACCGGTTAGTACACAACCTTTAAC 58.944 41.667 20.77 7.89 42.79 2.01
2237 2468 5.163311 ACCGGTTAGTACACAACCTTTAACT 60.163 40.000 20.77 0.00 42.79 2.24
2238 2469 5.759763 CCGGTTAGTACACAACCTTTAACTT 59.240 40.000 20.77 0.00 42.79 2.66
2239 2470 6.928492 CCGGTTAGTACACAACCTTTAACTTA 59.072 38.462 20.77 0.00 42.79 2.24
2240 2471 7.440856 CCGGTTAGTACACAACCTTTAACTTAA 59.559 37.037 20.77 0.00 42.79 1.85
2241 2472 8.825745 CGGTTAGTACACAACCTTTAACTTAAA 58.174 33.333 20.77 0.00 42.79 1.52
2264 2496 0.663153 AAAAAGACAGCTCGGTGCAC 59.337 50.000 8.80 8.80 45.94 4.57
2268 2500 2.049433 ACAGCTCGGTGCACGTAC 60.049 61.111 11.45 0.00 45.94 3.67
2269 2501 2.809601 CAGCTCGGTGCACGTACC 60.810 66.667 11.45 0.00 45.94 3.34
2270 2502 2.989824 AGCTCGGTGCACGTACCT 60.990 61.111 11.45 1.74 45.94 3.08
2271 2503 2.048503 GCTCGGTGCACGTACCTT 60.049 61.111 11.45 0.00 44.69 3.50
2272 2504 2.092882 GCTCGGTGCACGTACCTTC 61.093 63.158 11.45 0.00 44.69 3.46
2274 2506 2.807895 CGGTGCACGTACCTTCCG 60.808 66.667 11.45 1.77 38.62 4.30
2276 2508 2.048503 GTGCACGTACCTTCCGCT 60.049 61.111 0.00 0.00 0.00 5.52
2277 2509 1.666872 GTGCACGTACCTTCCGCTT 60.667 57.895 0.00 0.00 0.00 4.68
2278 2510 1.666553 TGCACGTACCTTCCGCTTG 60.667 57.895 0.00 0.00 0.00 4.01
2279 2511 3.023591 GCACGTACCTTCCGCTTGC 62.024 63.158 0.00 0.00 0.00 4.01
2280 2512 1.666553 CACGTACCTTCCGCTTGCA 60.667 57.895 0.00 0.00 0.00 4.08
2281 2513 1.374252 ACGTACCTTCCGCTTGCAG 60.374 57.895 0.00 0.00 0.00 4.41
2282 2514 1.080093 CGTACCTTCCGCTTGCAGA 60.080 57.895 0.00 0.00 0.00 4.26
2283 2515 1.078759 CGTACCTTCCGCTTGCAGAG 61.079 60.000 0.00 0.00 0.00 3.35
2284 2516 0.741221 GTACCTTCCGCTTGCAGAGG 60.741 60.000 0.00 0.00 36.42 3.69
2285 2517 1.192146 TACCTTCCGCTTGCAGAGGT 61.192 55.000 13.37 13.37 42.93 3.85
2286 2518 1.302832 CCTTCCGCTTGCAGAGGTT 60.303 57.895 6.00 0.00 36.49 3.50
2287 2519 1.301677 CCTTCCGCTTGCAGAGGTTC 61.302 60.000 6.00 0.00 36.49 3.62
2289 2521 0.603707 TTCCGCTTGCAGAGGTTCTG 60.604 55.000 1.75 1.75 46.90 3.02
2290 2522 2.037136 CCGCTTGCAGAGGTTCTGG 61.037 63.158 8.06 0.00 44.43 3.86
2294 2531 1.819305 GCTTGCAGAGGTTCTGGGAAA 60.819 52.381 8.06 0.00 44.43 3.13
2301 2538 1.002502 GGTTCTGGGAAAGGTCCGG 60.003 63.158 0.00 0.00 46.04 5.14
2331 2568 4.395625 GGGCCTATAGTACCCAACATTTC 58.604 47.826 18.89 0.00 43.64 2.17
2336 2573 6.743490 GCCTATAGTACCCAACATTTCCCTAC 60.743 46.154 0.00 0.00 0.00 3.18
2390 2627 1.669115 CCGTCATCATCGGGGATGC 60.669 63.158 11.03 6.85 43.44 3.91
2391 2628 1.368950 CGTCATCATCGGGGATGCT 59.631 57.895 11.03 0.00 43.44 3.79
2392 2629 0.603065 CGTCATCATCGGGGATGCTA 59.397 55.000 11.03 0.00 43.44 3.49
2393 2630 1.000843 CGTCATCATCGGGGATGCTAA 59.999 52.381 11.03 0.00 43.44 3.09
2394 2631 2.547855 CGTCATCATCGGGGATGCTAAA 60.548 50.000 11.03 0.00 43.44 1.85
2395 2632 3.679389 GTCATCATCGGGGATGCTAAAT 58.321 45.455 11.03 0.00 43.44 1.40
2396 2633 4.620567 CGTCATCATCGGGGATGCTAAATA 60.621 45.833 11.03 0.00 43.44 1.40
2400 2637 3.260884 TCATCGGGGATGCTAAATAGGTC 59.739 47.826 0.76 0.00 39.63 3.85
2403 2640 2.609737 CGGGGATGCTAAATAGGTCGAC 60.610 54.545 7.13 7.13 0.00 4.20
2407 2644 2.486951 TGCTAAATAGGTCGACGAGC 57.513 50.000 18.97 18.97 0.00 5.03
2409 2646 1.925068 GCTAAATAGGTCGACGAGCGG 60.925 57.143 20.23 9.32 41.33 5.52
2437 2674 1.374125 CAGACGGCGACCATCACAA 60.374 57.895 16.62 0.00 0.00 3.33
2438 2675 1.374252 AGACGGCGACCATCACAAC 60.374 57.895 16.62 0.00 0.00 3.32
2440 2677 3.487202 CGGCGACCATCACAACGG 61.487 66.667 0.00 0.00 0.00 4.44
2442 2679 3.047280 GCGACCATCACAACGGCA 61.047 61.111 0.00 0.00 0.00 5.69
2457 2813 1.901085 GGCATCGAGACTCCCTTGT 59.099 57.895 0.00 0.00 0.00 3.16
2458 2814 1.112113 GGCATCGAGACTCCCTTGTA 58.888 55.000 0.00 0.00 0.00 2.41
2463 2819 2.988570 TCGAGACTCCCTTGTAGACTC 58.011 52.381 0.00 0.00 33.99 3.36
2464 2820 2.572556 TCGAGACTCCCTTGTAGACTCT 59.427 50.000 0.00 0.00 34.80 3.24
2466 2822 2.425668 GAGACTCCCTTGTAGACTCTGC 59.574 54.545 0.00 0.00 34.35 4.26
2469 2825 1.480137 CTCCCTTGTAGACTCTGCCAG 59.520 57.143 0.00 0.00 0.00 4.85
2479 2835 1.170919 ACTCTGCCAGCAAAGCACAG 61.171 55.000 0.00 0.00 36.01 3.66
2480 2836 0.887836 CTCTGCCAGCAAAGCACAGA 60.888 55.000 0.00 8.42 36.01 3.41
2490 2846 1.490693 AAAGCACAGACACGCGACAG 61.491 55.000 15.93 4.52 0.00 3.51
2501 2857 0.033504 ACGCGACAGACCAAGAACAT 59.966 50.000 15.93 0.00 0.00 2.71
2531 2887 3.712881 GTGCTCACGAACGGCCAC 61.713 66.667 2.24 0.00 0.00 5.01
2550 2906 1.346722 ACCACTTGTAGTTCCTTCCCG 59.653 52.381 0.00 0.00 0.00 5.14
2552 2908 2.353803 CCACTTGTAGTTCCTTCCCGAG 60.354 54.545 0.00 0.00 0.00 4.63
2559 2915 3.589654 TTCCTTCCCGAGTGCAGCG 62.590 63.158 2.09 2.09 0.00 5.18
2561 2917 2.185350 CTTCCCGAGTGCAGCGAT 59.815 61.111 10.22 0.00 0.00 4.58
2566 2922 2.182791 CGAGTGCAGCGATGAGGT 59.817 61.111 4.02 0.00 0.00 3.85
2626 2982 4.741239 ATGGCGGGTGGAGGGTCT 62.741 66.667 0.00 0.00 0.00 3.85
2634 2990 2.997315 TGGAGGGTCTCGGCAGTG 60.997 66.667 0.00 0.00 0.00 3.66
2698 3060 1.592064 GCTCTCTAGCTCCATTTGCC 58.408 55.000 0.00 0.00 45.85 4.52
2699 3061 1.863267 CTCTCTAGCTCCATTTGCCG 58.137 55.000 0.00 0.00 0.00 5.69
2700 3062 1.137872 CTCTCTAGCTCCATTTGCCGT 59.862 52.381 0.00 0.00 0.00 5.68
2701 3063 1.137086 TCTCTAGCTCCATTTGCCGTC 59.863 52.381 0.00 0.00 0.00 4.79
2702 3064 0.179111 TCTAGCTCCATTTGCCGTCG 60.179 55.000 0.00 0.00 0.00 5.12
2703 3065 1.766143 CTAGCTCCATTTGCCGTCGC 61.766 60.000 0.00 0.00 0.00 5.19
2704 3066 2.514510 TAGCTCCATTTGCCGTCGCA 62.515 55.000 0.00 0.00 45.49 5.10
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.095768 TGAAAAGCTAAGCACGCATGTC 60.096 45.455 0.00 0.00 0.00 3.06
1 2 1.879380 TGAAAAGCTAAGCACGCATGT 59.121 42.857 0.00 0.00 0.00 3.21
9 10 3.950395 AGGACCATGATGAAAAGCTAAGC 59.050 43.478 0.00 0.00 0.00 3.09
14 15 1.135721 GCCAGGACCATGATGAAAAGC 59.864 52.381 0.00 0.00 0.00 3.51
26 27 0.757935 ATGAATGCATGGCCAGGACC 60.758 55.000 24.18 4.58 32.31 4.46
38 39 6.484308 AGCCCAATAATAAAGCAAATGAATGC 59.516 34.615 0.00 0.00 46.78 3.56
49 50 8.160106 AGATAGAAGGTCAGCCCAATAATAAAG 58.840 37.037 0.00 0.00 34.66 1.85
102 103 6.656693 CGAAGAAAATGAGCCCCTGATATATT 59.343 38.462 0.00 0.00 0.00 1.28
115 116 8.017373 TCTGCAATAGAAAACGAAGAAAATGAG 58.983 33.333 0.00 0.00 30.84 2.90
132 133 5.835280 AGATACCCCCAAATTTCTGCAATAG 59.165 40.000 0.00 0.00 0.00 1.73
149 150 7.660208 TGAACTTTTCTTCTGTGTTAGATACCC 59.340 37.037 0.00 0.00 34.80 3.69
155 156 7.974675 TCAGTTGAACTTTTCTTCTGTGTTAG 58.025 34.615 0.00 0.00 34.91 2.34
161 162 9.657121 GAACTAATCAGTTGAACTTTTCTTCTG 57.343 33.333 0.00 0.00 45.18 3.02
184 194 4.996062 CAATGGTTGCCAATTCAAGAAC 57.004 40.909 0.00 0.00 36.95 3.01
197 207 6.601741 ACAACATACAAAAAGCAATGGTTG 57.398 33.333 0.00 0.00 0.00 3.77
205 215 7.979115 TTGTCTGTTACAACATACAAAAAGC 57.021 32.000 18.26 0.00 46.28 3.51
228 238 8.716674 AGCCATATTGAACAAATGGATAGATT 57.283 30.769 21.09 0.00 42.36 2.40
231 241 8.415553 TCAAAGCCATATTGAACAAATGGATAG 58.584 33.333 21.09 15.11 42.36 2.08
233 243 7.185318 TCAAAGCCATATTGAACAAATGGAT 57.815 32.000 21.09 16.27 42.36 3.41
237 247 7.311364 GCATTCAAAGCCATATTGAACAAAT 57.689 32.000 4.03 0.00 46.26 2.32
251 269 7.622893 TTAATTAATTTGGGGCATTCAAAGC 57.377 32.000 5.91 0.00 37.50 3.51
318 338 4.286297 TCTACTTGCTTAGTTGCATGGT 57.714 40.909 0.00 0.00 42.96 3.55
319 339 5.182001 AGTTTCTACTTGCTTAGTTGCATGG 59.818 40.000 0.00 0.00 42.96 3.66
320 340 6.246420 AGTTTCTACTTGCTTAGTTGCATG 57.754 37.500 0.00 0.00 42.96 4.06
321 341 6.347725 CGAAGTTTCTACTTGCTTAGTTGCAT 60.348 38.462 0.00 0.00 44.51 3.96
322 342 5.050363 CGAAGTTTCTACTTGCTTAGTTGCA 60.050 40.000 0.00 0.00 44.51 4.08
323 343 5.374898 CGAAGTTTCTACTTGCTTAGTTGC 58.625 41.667 0.00 0.00 44.51 4.17
324 344 5.177696 AGCGAAGTTTCTACTTGCTTAGTTG 59.822 40.000 0.00 0.00 44.51 3.16
328 348 4.689345 GGAAGCGAAGTTTCTACTTGCTTA 59.311 41.667 18.51 0.00 46.50 3.09
330 350 3.067833 GGAAGCGAAGTTTCTACTTGCT 58.932 45.455 0.00 0.00 46.98 3.91
339 359 5.774498 AAATCTGAAAGGAAGCGAAGTTT 57.226 34.783 0.00 0.00 0.00 2.66
346 366 5.625311 CGTGTGTTAAAATCTGAAAGGAAGC 59.375 40.000 0.00 0.00 0.00 3.86
354 374 8.124199 GGTAGAAAAACGTGTGTTAAAATCTGA 58.876 33.333 0.00 0.00 37.31 3.27
359 379 7.143514 ACAGGTAGAAAAACGTGTGTTAAAA 57.856 32.000 0.00 0.00 44.39 1.52
360 380 6.740411 ACAGGTAGAAAAACGTGTGTTAAA 57.260 33.333 0.00 0.00 44.39 1.52
366 386 6.149142 TGTTAAACACAGGTAGAAAAACGTGT 59.851 34.615 0.00 0.00 46.35 4.49
367 387 6.544622 TGTTAAACACAGGTAGAAAAACGTG 58.455 36.000 0.00 0.00 40.28 4.49
368 388 6.740411 TGTTAAACACAGGTAGAAAAACGT 57.260 33.333 0.00 0.00 0.00 3.99
369 389 8.623310 AATTGTTAAACACAGGTAGAAAAACG 57.377 30.769 0.00 0.00 36.48 3.60
371 391 8.874816 GCAAATTGTTAAACACAGGTAGAAAAA 58.125 29.630 0.00 0.00 36.48 1.94
382 403 5.804979 ACACACTCTGCAAATTGTTAAACAC 59.195 36.000 0.00 0.00 0.00 3.32
388 409 4.158394 AGTGAACACACTCTGCAAATTGTT 59.842 37.500 7.68 0.00 40.30 2.83
401 422 6.018669 CCTGACTAAAAAGAGAGTGAACACAC 60.019 42.308 7.68 1.16 35.07 3.82
403 424 6.049790 ACCTGACTAAAAAGAGAGTGAACAC 58.950 40.000 0.00 0.00 0.00 3.32
414 435 8.398665 GGAGCATTACATAACCTGACTAAAAAG 58.601 37.037 0.00 0.00 0.00 2.27
419 440 6.553953 TTGGAGCATTACATAACCTGACTA 57.446 37.500 0.00 0.00 0.00 2.59
420 441 5.435686 TTGGAGCATTACATAACCTGACT 57.564 39.130 0.00 0.00 0.00 3.41
421 442 5.880332 TCTTTGGAGCATTACATAACCTGAC 59.120 40.000 0.00 0.00 0.00 3.51
422 443 6.061022 TCTTTGGAGCATTACATAACCTGA 57.939 37.500 0.00 0.00 0.00 3.86
423 444 5.882557 ACTCTTTGGAGCATTACATAACCTG 59.117 40.000 0.00 0.00 42.98 4.00
424 445 5.882557 CACTCTTTGGAGCATTACATAACCT 59.117 40.000 0.00 0.00 42.98 3.50
425 446 5.449177 GCACTCTTTGGAGCATTACATAACC 60.449 44.000 0.00 0.00 42.98 2.85
459 480 9.847224 GAACTTTCATATTCTTTAGGGATGGTA 57.153 33.333 0.00 0.00 0.00 3.25
472 494 9.926751 CATCACTGTACATGAACTTTCATATTC 57.073 33.333 0.00 0.00 45.62 1.75
521 543 5.554822 TTGCACCGATCATTAAGGTAAAC 57.445 39.130 0.00 0.00 36.34 2.01
545 571 7.888424 TCATATGGATTTGCATGAATTGTAGG 58.112 34.615 2.13 0.00 0.00 3.18
546 572 8.789762 TCTCATATGGATTTGCATGAATTGTAG 58.210 33.333 2.13 0.00 0.00 2.74
602 628 7.096885 CGCGAATTTTATGATGGAGATGAAAAC 60.097 37.037 0.00 0.00 0.00 2.43
605 631 5.560760 GCGCGAATTTTATGATGGAGATGAA 60.561 40.000 12.10 0.00 0.00 2.57
607 633 4.153986 GCGCGAATTTTATGATGGAGATG 58.846 43.478 12.10 0.00 0.00 2.90
613 639 1.608590 AGGGGCGCGAATTTTATGATG 59.391 47.619 12.10 0.00 0.00 3.07
615 641 1.305201 GAGGGGCGCGAATTTTATGA 58.695 50.000 12.10 0.00 0.00 2.15
617 643 1.308998 CTGAGGGGCGCGAATTTTAT 58.691 50.000 12.10 0.00 0.00 1.40
627 653 2.592861 GGCTATTGCTGAGGGGCG 60.593 66.667 0.00 0.00 39.59 6.13
840 1067 7.564717 GCACGACGATGTAATTTTAGTACTAGC 60.565 40.741 0.00 0.00 0.00 3.42
841 1068 7.762166 GCACGACGATGTAATTTTAGTACTAG 58.238 38.462 0.00 0.00 0.00 2.57
928 1155 5.735285 TGTGAGGCCATGATCTATTAGAG 57.265 43.478 5.01 0.00 0.00 2.43
935 1162 3.878237 ATGATTGTGAGGCCATGATCT 57.122 42.857 5.01 0.00 0.00 2.75
1031 1258 1.202639 TGTGACAGACGACCAATGCTT 60.203 47.619 0.00 0.00 0.00 3.91
1038 1265 1.202371 TGTGAGTTGTGACAGACGACC 60.202 52.381 0.00 0.00 39.59 4.79
1068 1295 1.971167 GGCGGCCATCTTGTTGTCA 60.971 57.895 15.62 0.00 0.00 3.58
1133 1360 0.035439 GGTCACCACCACCACTATGG 60.035 60.000 0.00 0.00 43.17 2.74
1134 1361 0.035439 GGGTCACCACCACCACTATG 60.035 60.000 0.00 0.00 45.94 2.23
1135 1362 1.205460 GGGGTCACCACCACCACTAT 61.205 60.000 0.00 0.00 45.94 2.12
1136 1363 1.844289 GGGGTCACCACCACCACTA 60.844 63.158 0.00 0.00 45.94 2.74
1137 1364 3.175710 GGGGTCACCACCACCACT 61.176 66.667 0.00 0.00 45.94 4.00
1148 1375 1.538167 GGCATGGATGATGGGGTCA 59.462 57.895 0.00 0.00 42.06 4.02
1150 1377 2.517414 CGGCATGGATGATGGGGT 59.483 61.111 0.00 0.00 31.99 4.95
1285 1512 3.365265 GAAGGCCACGCTGTTGGG 61.365 66.667 5.01 0.00 37.10 4.12
1350 1577 2.358737 GGCTGGGTGTTGGACTCG 60.359 66.667 0.00 0.00 0.00 4.18
1353 1580 2.597510 GTGGGCTGGGTGTTGGAC 60.598 66.667 0.00 0.00 0.00 4.02
1356 1583 2.978010 GACGTGGGCTGGGTGTTG 60.978 66.667 0.00 0.00 0.00 3.33
1398 1625 2.740714 GCCATGCTTGTCGACGGAC 61.741 63.158 11.62 2.73 43.71 4.79
1504 1731 0.458543 CAGTCGATGTAGCAGCGGTT 60.459 55.000 6.93 0.00 43.69 4.44
1539 1766 1.586422 CCATGATGTAGCCGAACCTG 58.414 55.000 0.00 0.00 0.00 4.00
1578 1805 1.097547 CCATGTCTTGGTCGATGGCC 61.098 60.000 0.00 0.00 40.99 5.36
1584 1811 0.036952 AGCAGTCCATGTCTTGGTCG 60.037 55.000 4.76 0.00 46.52 4.79
1586 1813 1.421268 TGAAGCAGTCCATGTCTTGGT 59.579 47.619 4.76 0.00 46.52 3.67
1587 1814 5.215134 GCTTGAAGCAGTCCATGTCTTGG 62.215 52.174 13.09 0.00 43.51 3.61
1588 1815 2.095364 GCTTGAAGCAGTCCATGTCTTG 60.095 50.000 13.09 0.00 41.89 3.02
1614 1841 0.677731 TGGCATCCTTCTCCTTTGCG 60.678 55.000 0.00 0.00 34.17 4.85
1623 1850 1.737838 TGTCATTCGTGGCATCCTTC 58.262 50.000 0.00 0.00 0.00 3.46
1650 1877 4.321452 GGAGAAATGAGCTTGCATGAAACA 60.321 41.667 3.33 0.58 0.00 2.83
1700 1927 4.312443 AGAGCAAATGCATTTTCAAGTGG 58.688 39.130 21.95 10.12 45.16 4.00
1702 1929 6.088016 TGTAGAGCAAATGCATTTTCAAGT 57.912 33.333 21.95 8.54 45.16 3.16
1731 1962 8.508062 AGTCGAGATATGAGTACATGTGATAAC 58.492 37.037 9.11 0.00 37.87 1.89
1734 1965 6.712547 TGAGTCGAGATATGAGTACATGTGAT 59.287 38.462 9.11 0.00 37.87 3.06
1788 2019 6.073873 CGCCATAGAAGAAAAGCTCAGATAAG 60.074 42.308 0.00 0.00 0.00 1.73
1789 2020 5.755375 CGCCATAGAAGAAAAGCTCAGATAA 59.245 40.000 0.00 0.00 0.00 1.75
1790 2021 5.069119 TCGCCATAGAAGAAAAGCTCAGATA 59.931 40.000 0.00 0.00 0.00 1.98
1791 2022 4.125703 CGCCATAGAAGAAAAGCTCAGAT 58.874 43.478 0.00 0.00 0.00 2.90
1792 2023 3.195610 TCGCCATAGAAGAAAAGCTCAGA 59.804 43.478 0.00 0.00 0.00 3.27
1793 2024 3.525537 TCGCCATAGAAGAAAAGCTCAG 58.474 45.455 0.00 0.00 0.00 3.35
1794 2025 3.195610 TCTCGCCATAGAAGAAAAGCTCA 59.804 43.478 0.00 0.00 0.00 4.26
1795 2026 3.786635 TCTCGCCATAGAAGAAAAGCTC 58.213 45.455 0.00 0.00 0.00 4.09
1796 2027 3.895232 TCTCGCCATAGAAGAAAAGCT 57.105 42.857 0.00 0.00 0.00 3.74
1797 2028 3.249559 CCATCTCGCCATAGAAGAAAAGC 59.750 47.826 0.00 0.00 0.00 3.51
1798 2029 4.272018 CACCATCTCGCCATAGAAGAAAAG 59.728 45.833 0.00 0.00 0.00 2.27
1799 2030 4.191544 CACCATCTCGCCATAGAAGAAAA 58.808 43.478 0.00 0.00 0.00 2.29
1800 2031 3.432186 CCACCATCTCGCCATAGAAGAAA 60.432 47.826 0.00 0.00 0.00 2.52
1801 2032 2.103094 CCACCATCTCGCCATAGAAGAA 59.897 50.000 0.00 0.00 0.00 2.52
1802 2033 1.688735 CCACCATCTCGCCATAGAAGA 59.311 52.381 0.00 0.00 0.00 2.87
1803 2034 1.688735 TCCACCATCTCGCCATAGAAG 59.311 52.381 0.00 0.00 0.00 2.85
1804 2035 1.688735 CTCCACCATCTCGCCATAGAA 59.311 52.381 0.00 0.00 0.00 2.10
1805 2036 1.332195 CTCCACCATCTCGCCATAGA 58.668 55.000 0.00 0.00 0.00 1.98
1806 2037 0.319728 CCTCCACCATCTCGCCATAG 59.680 60.000 0.00 0.00 0.00 2.23
1807 2038 0.105709 TCCTCCACCATCTCGCCATA 60.106 55.000 0.00 0.00 0.00 2.74
1808 2039 0.765903 ATCCTCCACCATCTCGCCAT 60.766 55.000 0.00 0.00 0.00 4.40
1809 2040 1.383109 ATCCTCCACCATCTCGCCA 60.383 57.895 0.00 0.00 0.00 5.69
1810 2041 1.369321 GATCCTCCACCATCTCGCC 59.631 63.158 0.00 0.00 0.00 5.54
1811 2042 1.369321 GGATCCTCCACCATCTCGC 59.631 63.158 3.84 0.00 36.28 5.03
1812 2043 1.662608 CGGATCCTCCACCATCTCG 59.337 63.158 10.75 0.00 35.91 4.04
1813 2044 1.369321 GCGGATCCTCCACCATCTC 59.631 63.158 10.75 0.00 35.91 2.75
1814 2045 2.502492 CGCGGATCCTCCACCATCT 61.502 63.158 10.75 0.00 35.91 2.90
1815 2046 2.029666 CGCGGATCCTCCACCATC 59.970 66.667 10.75 0.00 35.91 3.51
1816 2047 3.550431 CCGCGGATCCTCCACCAT 61.550 66.667 24.07 0.00 35.91 3.55
1830 2061 2.126657 TCAAAAATTCGCCGCCGC 60.127 55.556 0.00 0.00 0.00 6.53
1831 2062 1.514014 CCTCAAAAATTCGCCGCCG 60.514 57.895 0.00 0.00 0.00 6.46
1832 2063 1.153842 CCCTCAAAAATTCGCCGCC 60.154 57.895 0.00 0.00 0.00 6.13
1833 2064 0.179163 CTCCCTCAAAAATTCGCCGC 60.179 55.000 0.00 0.00 0.00 6.53
1834 2065 1.398390 CTCTCCCTCAAAAATTCGCCG 59.602 52.381 0.00 0.00 0.00 6.46
1835 2066 2.680339 CTCTCTCCCTCAAAAATTCGCC 59.320 50.000 0.00 0.00 0.00 5.54
1836 2067 3.600388 TCTCTCTCCCTCAAAAATTCGC 58.400 45.455 0.00 0.00 0.00 4.70
1837 2068 5.064452 CACATCTCTCTCCCTCAAAAATTCG 59.936 44.000 0.00 0.00 0.00 3.34
1838 2069 6.176183 TCACATCTCTCTCCCTCAAAAATTC 58.824 40.000 0.00 0.00 0.00 2.17
1839 2070 6.131972 TCACATCTCTCTCCCTCAAAAATT 57.868 37.500 0.00 0.00 0.00 1.82
1840 2071 5.768980 TCACATCTCTCTCCCTCAAAAAT 57.231 39.130 0.00 0.00 0.00 1.82
1841 2072 5.768980 ATCACATCTCTCTCCCTCAAAAA 57.231 39.130 0.00 0.00 0.00 1.94
1842 2073 5.365025 CCTATCACATCTCTCTCCCTCAAAA 59.635 44.000 0.00 0.00 0.00 2.44
1843 2074 4.898265 CCTATCACATCTCTCTCCCTCAAA 59.102 45.833 0.00 0.00 0.00 2.69
1844 2075 4.478203 CCTATCACATCTCTCTCCCTCAA 58.522 47.826 0.00 0.00 0.00 3.02
1845 2076 3.181424 CCCTATCACATCTCTCTCCCTCA 60.181 52.174 0.00 0.00 0.00 3.86
1846 2077 3.075283 TCCCTATCACATCTCTCTCCCTC 59.925 52.174 0.00 0.00 0.00 4.30
1847 2078 3.067470 TCCCTATCACATCTCTCTCCCT 58.933 50.000 0.00 0.00 0.00 4.20
1848 2079 3.430453 CTCCCTATCACATCTCTCTCCC 58.570 54.545 0.00 0.00 0.00 4.30
1849 2080 3.075283 TCCTCCCTATCACATCTCTCTCC 59.925 52.174 0.00 0.00 0.00 3.71
1850 2081 4.380843 TCCTCCCTATCACATCTCTCTC 57.619 50.000 0.00 0.00 0.00 3.20
1851 2082 4.449081 CCTTCCTCCCTATCACATCTCTCT 60.449 50.000 0.00 0.00 0.00 3.10
1852 2083 3.831911 CCTTCCTCCCTATCACATCTCTC 59.168 52.174 0.00 0.00 0.00 3.20
1853 2084 3.439260 CCCTTCCTCCCTATCACATCTCT 60.439 52.174 0.00 0.00 0.00 3.10
1854 2085 2.903135 CCCTTCCTCCCTATCACATCTC 59.097 54.545 0.00 0.00 0.00 2.75
1855 2086 2.428484 CCCCTTCCTCCCTATCACATCT 60.428 54.545 0.00 0.00 0.00 2.90
1856 2087 1.981495 CCCCTTCCTCCCTATCACATC 59.019 57.143 0.00 0.00 0.00 3.06
1857 2088 1.298382 ACCCCTTCCTCCCTATCACAT 59.702 52.381 0.00 0.00 0.00 3.21
1858 2089 0.722676 ACCCCTTCCTCCCTATCACA 59.277 55.000 0.00 0.00 0.00 3.58
1859 2090 1.490910 CAACCCCTTCCTCCCTATCAC 59.509 57.143 0.00 0.00 0.00 3.06
1860 2091 1.893315 CAACCCCTTCCTCCCTATCA 58.107 55.000 0.00 0.00 0.00 2.15
1861 2092 0.474614 GCAACCCCTTCCTCCCTATC 59.525 60.000 0.00 0.00 0.00 2.08
1862 2093 1.345715 CGCAACCCCTTCCTCCCTAT 61.346 60.000 0.00 0.00 0.00 2.57
1863 2094 1.993391 CGCAACCCCTTCCTCCCTA 60.993 63.158 0.00 0.00 0.00 3.53
1864 2095 3.330720 CGCAACCCCTTCCTCCCT 61.331 66.667 0.00 0.00 0.00 4.20
1865 2096 4.426313 CCGCAACCCCTTCCTCCC 62.426 72.222 0.00 0.00 0.00 4.30
1866 2097 4.426313 CCCGCAACCCCTTCCTCC 62.426 72.222 0.00 0.00 0.00 4.30
1867 2098 3.327404 TCCCGCAACCCCTTCCTC 61.327 66.667 0.00 0.00 0.00 3.71
1868 2099 3.330720 CTCCCGCAACCCCTTCCT 61.331 66.667 0.00 0.00 0.00 3.36
1869 2100 2.680370 ATCTCCCGCAACCCCTTCC 61.680 63.158 0.00 0.00 0.00 3.46
1870 2101 1.452108 CATCTCCCGCAACCCCTTC 60.452 63.158 0.00 0.00 0.00 3.46
1871 2102 2.677228 CATCTCCCGCAACCCCTT 59.323 61.111 0.00 0.00 0.00 3.95
1872 2103 3.411517 CCATCTCCCGCAACCCCT 61.412 66.667 0.00 0.00 0.00 4.79
1873 2104 4.506255 CCCATCTCCCGCAACCCC 62.506 72.222 0.00 0.00 0.00 4.95
1874 2105 4.506255 CCCCATCTCCCGCAACCC 62.506 72.222 0.00 0.00 0.00 4.11
1875 2106 4.506255 CCCCCATCTCCCGCAACC 62.506 72.222 0.00 0.00 0.00 3.77
1879 2110 4.962836 CATGCCCCCATCTCCCGC 62.963 72.222 0.00 0.00 0.00 6.13
1880 2111 4.275508 CCATGCCCCCATCTCCCG 62.276 72.222 0.00 0.00 0.00 5.14
1881 2112 2.394506 TTCCATGCCCCCATCTCCC 61.395 63.158 0.00 0.00 0.00 4.30
1882 2113 1.152673 GTTCCATGCCCCCATCTCC 60.153 63.158 0.00 0.00 0.00 3.71
1883 2114 0.186873 ATGTTCCATGCCCCCATCTC 59.813 55.000 0.00 0.00 0.00 2.75
1884 2115 1.426598 CTATGTTCCATGCCCCCATCT 59.573 52.381 0.00 0.00 0.00 2.90
1885 2116 1.145738 ACTATGTTCCATGCCCCCATC 59.854 52.381 0.00 0.00 0.00 3.51
1886 2117 1.234806 ACTATGTTCCATGCCCCCAT 58.765 50.000 0.00 0.00 0.00 4.00
1887 2118 1.774254 CTACTATGTTCCATGCCCCCA 59.226 52.381 0.00 0.00 0.00 4.96
1888 2119 1.774856 ACTACTATGTTCCATGCCCCC 59.225 52.381 0.00 0.00 0.00 5.40
1889 2120 4.699925 TTACTACTATGTTCCATGCCCC 57.300 45.455 0.00 0.00 0.00 5.80
1890 2121 6.534634 AGAATTACTACTATGTTCCATGCCC 58.465 40.000 0.00 0.00 0.00 5.36
1891 2122 8.451908 AAAGAATTACTACTATGTTCCATGCC 57.548 34.615 0.00 0.00 0.00 4.40
1912 2143 8.717821 CCTCTGATACACACGAATTTAAAAAGA 58.282 33.333 0.00 0.00 0.00 2.52
1913 2144 8.504005 ACCTCTGATACACACGAATTTAAAAAG 58.496 33.333 0.00 0.00 0.00 2.27
1914 2145 8.385898 ACCTCTGATACACACGAATTTAAAAA 57.614 30.769 0.00 0.00 0.00 1.94
1915 2146 7.972832 ACCTCTGATACACACGAATTTAAAA 57.027 32.000 0.00 0.00 0.00 1.52
1916 2147 7.762615 CCTACCTCTGATACACACGAATTTAAA 59.237 37.037 0.00 0.00 0.00 1.52
1917 2148 7.262772 CCTACCTCTGATACACACGAATTTAA 58.737 38.462 0.00 0.00 0.00 1.52
1918 2149 6.183360 CCCTACCTCTGATACACACGAATTTA 60.183 42.308 0.00 0.00 0.00 1.40
1919 2150 5.395324 CCCTACCTCTGATACACACGAATTT 60.395 44.000 0.00 0.00 0.00 1.82
1920 2151 4.099573 CCCTACCTCTGATACACACGAATT 59.900 45.833 0.00 0.00 0.00 2.17
1921 2152 3.637229 CCCTACCTCTGATACACACGAAT 59.363 47.826 0.00 0.00 0.00 3.34
1922 2153 3.021695 CCCTACCTCTGATACACACGAA 58.978 50.000 0.00 0.00 0.00 3.85
1923 2154 2.025605 ACCCTACCTCTGATACACACGA 60.026 50.000 0.00 0.00 0.00 4.35
1924 2155 2.099263 CACCCTACCTCTGATACACACG 59.901 54.545 0.00 0.00 0.00 4.49
1925 2156 3.362706 TCACCCTACCTCTGATACACAC 58.637 50.000 0.00 0.00 0.00 3.82
1926 2157 3.011369 ACTCACCCTACCTCTGATACACA 59.989 47.826 0.00 0.00 0.00 3.72
1927 2158 3.633065 GACTCACCCTACCTCTGATACAC 59.367 52.174 0.00 0.00 0.00 2.90
1928 2159 3.268595 TGACTCACCCTACCTCTGATACA 59.731 47.826 0.00 0.00 0.00 2.29
1929 2160 3.633065 GTGACTCACCCTACCTCTGATAC 59.367 52.174 0.00 0.00 0.00 2.24
1930 2161 3.684697 CGTGACTCACCCTACCTCTGATA 60.685 52.174 3.50 0.00 0.00 2.15
1931 2162 2.741145 GTGACTCACCCTACCTCTGAT 58.259 52.381 0.00 0.00 0.00 2.90
1932 2163 1.613520 CGTGACTCACCCTACCTCTGA 60.614 57.143 3.50 0.00 0.00 3.27
1933 2164 0.811915 CGTGACTCACCCTACCTCTG 59.188 60.000 3.50 0.00 0.00 3.35
1934 2165 0.966370 GCGTGACTCACCCTACCTCT 60.966 60.000 3.50 0.00 0.00 3.69
1935 2166 1.511768 GCGTGACTCACCCTACCTC 59.488 63.158 3.50 0.00 0.00 3.85
1936 2167 2.341101 CGCGTGACTCACCCTACCT 61.341 63.158 0.00 0.00 0.00 3.08
1937 2168 2.181021 CGCGTGACTCACCCTACC 59.819 66.667 0.00 0.00 0.00 3.18
1938 2169 2.181021 CCGCGTGACTCACCCTAC 59.819 66.667 4.92 0.00 0.00 3.18
1939 2170 3.066190 CCCGCGTGACTCACCCTA 61.066 66.667 4.92 0.00 0.00 3.53
1945 2176 4.436998 CTCCACCCCGCGTGACTC 62.437 72.222 4.92 0.00 46.20 3.36
1953 2184 4.764771 TACGGTCCCTCCACCCCG 62.765 72.222 0.00 0.00 45.72 5.73
1954 2185 3.079478 GTACGGTCCCTCCACCCC 61.079 72.222 0.00 0.00 35.57 4.95
1955 2186 1.688187 ATGTACGGTCCCTCCACCC 60.688 63.158 0.00 0.00 35.57 4.61
1956 2187 1.262640 ACATGTACGGTCCCTCCACC 61.263 60.000 0.00 0.00 35.57 4.61
1957 2188 0.108329 CACATGTACGGTCCCTCCAC 60.108 60.000 0.00 0.00 35.57 4.02
1958 2189 1.261938 CCACATGTACGGTCCCTCCA 61.262 60.000 0.00 0.00 35.57 3.86
1959 2190 0.974010 TCCACATGTACGGTCCCTCC 60.974 60.000 0.00 0.00 0.00 4.30
1960 2191 0.460311 CTCCACATGTACGGTCCCTC 59.540 60.000 0.00 0.00 0.00 4.30
1961 2192 0.976073 CCTCCACATGTACGGTCCCT 60.976 60.000 0.00 0.00 0.00 4.20
1962 2193 1.520666 CCTCCACATGTACGGTCCC 59.479 63.158 0.00 0.00 0.00 4.46
1963 2194 1.520666 CCCTCCACATGTACGGTCC 59.479 63.158 0.00 0.00 0.00 4.46
1964 2195 1.520666 CCCCTCCACATGTACGGTC 59.479 63.158 0.00 0.00 0.00 4.79
1965 2196 1.993391 CCCCCTCCACATGTACGGT 60.993 63.158 0.00 0.00 0.00 4.83
1966 2197 1.968050 GACCCCCTCCACATGTACGG 61.968 65.000 0.00 0.00 0.00 4.02
1967 2198 1.520666 GACCCCCTCCACATGTACG 59.479 63.158 0.00 0.00 0.00 3.67
1968 2199 0.974010 TCGACCCCCTCCACATGTAC 60.974 60.000 0.00 0.00 0.00 2.90
1969 2200 0.252330 TTCGACCCCCTCCACATGTA 60.252 55.000 0.00 0.00 0.00 2.29
1970 2201 1.537889 TTCGACCCCCTCCACATGT 60.538 57.895 0.00 0.00 0.00 3.21
1971 2202 1.078426 GTTCGACCCCCTCCACATG 60.078 63.158 0.00 0.00 0.00 3.21
1972 2203 2.298661 GGTTCGACCCCCTCCACAT 61.299 63.158 0.00 0.00 30.04 3.21
1973 2204 2.926242 GGTTCGACCCCCTCCACA 60.926 66.667 0.00 0.00 30.04 4.17
1974 2205 2.253403 GATGGTTCGACCCCCTCCAC 62.253 65.000 0.00 0.00 37.50 4.02
1975 2206 1.993391 GATGGTTCGACCCCCTCCA 60.993 63.158 0.00 0.00 37.50 3.86
1976 2207 1.972660 CTGATGGTTCGACCCCCTCC 61.973 65.000 0.00 0.00 37.50 4.30
1977 2208 1.522569 CTGATGGTTCGACCCCCTC 59.477 63.158 0.00 0.00 37.50 4.30
1978 2209 1.995626 CCTGATGGTTCGACCCCCT 60.996 63.158 0.00 0.00 37.50 4.79
1979 2210 1.993391 TCCTGATGGTTCGACCCCC 60.993 63.158 0.00 0.00 37.50 5.40
1980 2211 1.221021 GTCCTGATGGTTCGACCCC 59.779 63.158 0.00 0.00 37.50 4.95
1981 2212 1.153628 CGTCCTGATGGTTCGACCC 60.154 63.158 0.00 0.00 37.50 4.46
1982 2213 0.458025 GTCGTCCTGATGGTTCGACC 60.458 60.000 16.94 0.00 45.38 4.79
1983 2214 0.797249 CGTCGTCCTGATGGTTCGAC 60.797 60.000 17.40 17.40 46.33 4.20
1984 2215 0.956902 TCGTCGTCCTGATGGTTCGA 60.957 55.000 0.00 0.00 37.95 3.71
1985 2216 0.797249 GTCGTCGTCCTGATGGTTCG 60.797 60.000 0.00 0.00 34.17 3.95
1986 2217 0.242825 TGTCGTCGTCCTGATGGTTC 59.757 55.000 0.00 0.00 34.17 3.62
1987 2218 0.677288 TTGTCGTCGTCCTGATGGTT 59.323 50.000 0.00 0.00 34.17 3.67
1988 2219 0.038526 GTTGTCGTCGTCCTGATGGT 60.039 55.000 0.00 0.00 34.17 3.55
1989 2220 0.038618 TGTTGTCGTCGTCCTGATGG 60.039 55.000 0.00 0.00 34.17 3.51
1990 2221 1.455786 GTTGTTGTCGTCGTCCTGATG 59.544 52.381 0.00 0.00 34.73 3.07
1991 2222 1.779569 GTTGTTGTCGTCGTCCTGAT 58.220 50.000 0.00 0.00 0.00 2.90
1992 2223 0.593008 CGTTGTTGTCGTCGTCCTGA 60.593 55.000 0.00 0.00 0.00 3.86
1993 2224 0.593008 TCGTTGTTGTCGTCGTCCTG 60.593 55.000 0.00 0.00 0.00 3.86
1994 2225 0.593263 GTCGTTGTTGTCGTCGTCCT 60.593 55.000 0.00 0.00 0.00 3.85
1995 2226 1.543106 GGTCGTTGTTGTCGTCGTCC 61.543 60.000 0.00 0.00 0.00 4.79
1996 2227 1.842028 GGTCGTTGTTGTCGTCGTC 59.158 57.895 0.00 0.00 0.00 4.20
1997 2228 1.940758 CGGTCGTTGTTGTCGTCGT 60.941 57.895 0.00 0.00 0.00 4.34
1998 2229 2.834560 CGGTCGTTGTTGTCGTCG 59.165 61.111 0.00 0.00 0.00 5.12
1999 2230 1.554042 ATGCGGTCGTTGTTGTCGTC 61.554 55.000 0.00 0.00 0.00 4.20
2000 2231 0.318869 TATGCGGTCGTTGTTGTCGT 60.319 50.000 0.00 0.00 0.00 4.34
2001 2232 0.996462 ATATGCGGTCGTTGTTGTCG 59.004 50.000 0.00 0.00 0.00 4.35
2002 2233 1.326548 GGATATGCGGTCGTTGTTGTC 59.673 52.381 0.00 0.00 0.00 3.18
2003 2234 1.365699 GGATATGCGGTCGTTGTTGT 58.634 50.000 0.00 0.00 0.00 3.32
2004 2235 0.655733 GGGATATGCGGTCGTTGTTG 59.344 55.000 0.00 0.00 0.00 3.33
2005 2236 0.463116 GGGGATATGCGGTCGTTGTT 60.463 55.000 0.00 0.00 0.00 2.83
2006 2237 1.145377 GGGGATATGCGGTCGTTGT 59.855 57.895 0.00 0.00 0.00 3.32
2007 2238 1.597027 GGGGGATATGCGGTCGTTG 60.597 63.158 0.00 0.00 0.00 4.10
2008 2239 1.342672 AAGGGGGATATGCGGTCGTT 61.343 55.000 0.00 0.00 0.00 3.85
2009 2240 1.342672 AAAGGGGGATATGCGGTCGT 61.343 55.000 0.00 0.00 0.00 4.34
2010 2241 0.682852 TAAAGGGGGATATGCGGTCG 59.317 55.000 0.00 0.00 0.00 4.79
2011 2242 2.105993 ACTTAAAGGGGGATATGCGGTC 59.894 50.000 0.00 0.00 0.00 4.79
2012 2243 2.132686 ACTTAAAGGGGGATATGCGGT 58.867 47.619 0.00 0.00 0.00 5.68
2013 2244 2.951229 ACTTAAAGGGGGATATGCGG 57.049 50.000 0.00 0.00 0.00 5.69
2014 2245 4.618920 ACTACTTAAAGGGGGATATGCG 57.381 45.455 0.00 0.00 0.00 4.73
2015 2246 6.724905 TCTCTACTACTTAAAGGGGGATATGC 59.275 42.308 0.00 0.00 0.00 3.14
2016 2247 8.722622 TTCTCTACTACTTAAAGGGGGATATG 57.277 38.462 0.00 0.00 0.00 1.78
2017 2248 8.744365 TCTTCTCTACTACTTAAAGGGGGATAT 58.256 37.037 0.00 0.00 0.00 1.63
2018 2249 8.122646 TCTTCTCTACTACTTAAAGGGGGATA 57.877 38.462 0.00 0.00 0.00 2.59
2019 2250 6.994582 TCTTCTCTACTACTTAAAGGGGGAT 58.005 40.000 0.00 0.00 0.00 3.85
2020 2251 6.413129 TCTTCTCTACTACTTAAAGGGGGA 57.587 41.667 0.00 0.00 0.00 4.81
2021 2252 6.839657 TGATCTTCTCTACTACTTAAAGGGGG 59.160 42.308 0.00 0.00 0.00 5.40
2022 2253 7.899648 TGATCTTCTCTACTACTTAAAGGGG 57.100 40.000 0.00 0.00 0.00 4.79
2023 2254 9.137459 TGATGATCTTCTCTACTACTTAAAGGG 57.863 37.037 9.75 0.00 0.00 3.95
2033 2264 9.381033 CAACAAAGAATGATGATCTTCTCTACT 57.619 33.333 9.75 2.51 36.14 2.57
2034 2265 9.160496 ACAACAAAGAATGATGATCTTCTCTAC 57.840 33.333 9.75 0.58 36.14 2.59
2035 2266 9.376075 GACAACAAAGAATGATGATCTTCTCTA 57.624 33.333 9.75 0.00 36.14 2.43
2036 2267 8.102047 AGACAACAAAGAATGATGATCTTCTCT 58.898 33.333 9.75 3.00 36.14 3.10
2037 2268 8.266392 AGACAACAAAGAATGATGATCTTCTC 57.734 34.615 9.75 0.87 36.14 2.87
2038 2269 9.730705 TTAGACAACAAAGAATGATGATCTTCT 57.269 29.630 9.75 0.09 36.14 2.85
2119 2350 7.230747 TGAAAAGACCATTATCCAGAAGTCAA 58.769 34.615 0.00 0.00 0.00 3.18
2153 2384 8.200120 AGAATTCAGTCATCATCGAATCAACTA 58.800 33.333 8.44 0.00 0.00 2.24
2163 2394 4.205587 AGGCCAAGAATTCAGTCATCATC 58.794 43.478 5.01 0.00 0.00 2.92
2164 2395 4.246712 AGGCCAAGAATTCAGTCATCAT 57.753 40.909 5.01 0.00 0.00 2.45
2165 2396 3.726557 AGGCCAAGAATTCAGTCATCA 57.273 42.857 5.01 0.00 0.00 3.07
2170 2401 8.957466 GTAATTAAAGTAGGCCAAGAATTCAGT 58.043 33.333 5.01 0.00 0.00 3.41
2176 2407 7.235804 AGGTTGTAATTAAAGTAGGCCAAGAA 58.764 34.615 5.01 0.00 0.00 2.52
2182 2413 6.657966 AGTTGGAGGTTGTAATTAAAGTAGGC 59.342 38.462 0.00 0.00 0.00 3.93
2191 2422 5.069914 GGTTTTGGAGTTGGAGGTTGTAATT 59.930 40.000 0.00 0.00 0.00 1.40
2192 2423 4.587262 GGTTTTGGAGTTGGAGGTTGTAAT 59.413 41.667 0.00 0.00 0.00 1.89
2193 2424 3.955551 GGTTTTGGAGTTGGAGGTTGTAA 59.044 43.478 0.00 0.00 0.00 2.41
2208 2439 3.003585 GGTTGTGTACTAACCGGTTTTGG 59.996 47.826 27.64 17.78 38.32 3.28
2209 2440 4.213596 GGTTGTGTACTAACCGGTTTTG 57.786 45.455 27.64 20.40 38.32 2.44
2256 2488 2.652530 GGAAGGTACGTGCACCGA 59.347 61.111 12.15 0.00 43.84 4.69
2264 2496 1.078759 CTCTGCAAGCGGAAGGTACG 61.079 60.000 4.97 0.00 43.76 3.67
2268 2500 1.301677 GAACCTCTGCAAGCGGAAGG 61.302 60.000 4.97 10.51 42.98 3.46
2269 2501 0.321122 AGAACCTCTGCAAGCGGAAG 60.321 55.000 4.97 1.43 42.98 3.46
2270 2502 0.603707 CAGAACCTCTGCAAGCGGAA 60.604 55.000 4.97 0.00 42.98 4.30
2271 2503 1.004560 CAGAACCTCTGCAAGCGGA 60.005 57.895 3.24 3.24 42.98 5.54
2272 2504 2.037136 CCAGAACCTCTGCAAGCGG 61.037 63.158 0.00 0.00 46.67 5.52
2274 2506 0.250901 TTCCCAGAACCTCTGCAAGC 60.251 55.000 0.00 0.00 42.98 4.01
2276 2508 1.202927 CCTTTCCCAGAACCTCTGCAA 60.203 52.381 0.00 0.00 42.98 4.08
2277 2509 0.401738 CCTTTCCCAGAACCTCTGCA 59.598 55.000 0.00 0.00 42.98 4.41
2278 2510 0.402121 ACCTTTCCCAGAACCTCTGC 59.598 55.000 0.00 0.00 42.98 4.26
2279 2511 1.003696 GGACCTTTCCCAGAACCTCTG 59.996 57.143 0.00 0.00 43.91 3.35
2280 2512 1.363246 GGACCTTTCCCAGAACCTCT 58.637 55.000 0.00 0.00 35.57 3.69
2281 2513 0.036294 CGGACCTTTCCCAGAACCTC 60.036 60.000 0.00 0.00 38.99 3.85
2282 2514 1.489560 CCGGACCTTTCCCAGAACCT 61.490 60.000 0.00 0.00 38.99 3.50
2283 2515 1.002502 CCGGACCTTTCCCAGAACC 60.003 63.158 0.00 0.00 38.99 3.62
2284 2516 1.674651 GCCGGACCTTTCCCAGAAC 60.675 63.158 5.05 0.00 38.99 3.01
2285 2517 2.754375 GCCGGACCTTTCCCAGAA 59.246 61.111 5.05 0.00 38.99 3.02
2286 2518 3.327404 GGCCGGACCTTTCCCAGA 61.327 66.667 5.05 0.00 38.99 3.86
2287 2519 2.499303 AATGGCCGGACCTTTCCCAG 62.499 60.000 3.83 0.00 38.99 4.45
2289 2521 0.902984 AAAATGGCCGGACCTTTCCC 60.903 55.000 11.30 0.00 38.99 3.97
2290 2522 0.246360 CAAAATGGCCGGACCTTTCC 59.754 55.000 11.30 0.00 40.22 3.13
2294 2531 2.037208 CCCAAAATGGCCGGACCT 59.963 61.111 3.83 0.00 40.22 3.85
2312 2549 5.906772 AGGGAAATGTTGGGTACTATAGG 57.093 43.478 4.43 0.00 0.00 2.57
2322 2559 4.220382 TGCAGAAATGTAGGGAAATGTTGG 59.780 41.667 0.00 0.00 0.00 3.77
2325 2562 5.324409 TCTTGCAGAAATGTAGGGAAATGT 58.676 37.500 0.00 0.00 0.00 2.71
2326 2563 5.163581 CCTCTTGCAGAAATGTAGGGAAATG 60.164 44.000 0.00 0.00 0.00 2.32
2327 2564 4.952335 CCTCTTGCAGAAATGTAGGGAAAT 59.048 41.667 0.00 0.00 0.00 2.17
2328 2565 4.202567 ACCTCTTGCAGAAATGTAGGGAAA 60.203 41.667 0.00 0.00 0.00 3.13
2331 2568 3.356529 ACCTCTTGCAGAAATGTAGGG 57.643 47.619 0.00 0.00 0.00 3.53
2336 2573 5.350633 TGAAAACAACCTCTTGCAGAAATG 58.649 37.500 0.00 0.00 0.00 2.32
2390 2627 1.334779 CCCGCTCGTCGACCTATTTAG 60.335 57.143 10.58 0.00 41.67 1.85
2391 2628 0.664761 CCCGCTCGTCGACCTATTTA 59.335 55.000 10.58 0.00 41.67 1.40
2392 2629 1.318158 ACCCGCTCGTCGACCTATTT 61.318 55.000 10.58 0.00 41.67 1.40
2393 2630 1.722636 GACCCGCTCGTCGACCTATT 61.723 60.000 10.58 0.00 41.67 1.73
2394 2631 2.124403 ACCCGCTCGTCGACCTAT 60.124 61.111 10.58 0.00 41.67 2.57
2395 2632 2.821366 GACCCGCTCGTCGACCTA 60.821 66.667 10.58 0.00 41.67 3.08
2407 2644 4.824166 CGTCTGTACGCCGACCCG 62.824 72.222 0.00 0.00 43.12 5.28
2420 2657 1.374252 GTTGTGATGGTCGCCGTCT 60.374 57.895 15.90 0.00 40.04 4.18
2423 2660 3.487202 CCGTTGTGATGGTCGCCG 61.487 66.667 0.00 0.00 0.00 6.46
2425 2662 2.309764 GATGCCGTTGTGATGGTCGC 62.310 60.000 0.00 0.00 34.20 5.19
2426 2663 1.715585 GATGCCGTTGTGATGGTCG 59.284 57.895 0.00 0.00 34.20 4.79
2428 2665 0.740868 CTCGATGCCGTTGTGATGGT 60.741 55.000 0.00 0.00 37.05 3.55
2437 2674 1.682684 AAGGGAGTCTCGATGCCGT 60.683 57.895 0.00 0.00 37.05 5.68
2438 2675 1.227089 CAAGGGAGTCTCGATGCCG 60.227 63.158 0.00 0.00 32.53 5.69
2440 2677 2.025155 TCTACAAGGGAGTCTCGATGC 58.975 52.381 0.00 0.00 0.00 3.91
2442 2679 3.201266 AGAGTCTACAAGGGAGTCTCGAT 59.799 47.826 0.00 0.00 38.64 3.59
2457 2813 0.686789 TGCTTTGCTGGCAGAGTCTA 59.313 50.000 20.86 0.00 34.56 2.59
2458 2814 0.888285 GTGCTTTGCTGGCAGAGTCT 60.888 55.000 20.86 0.00 40.54 3.24
2463 2819 1.285023 GTCTGTGCTTTGCTGGCAG 59.715 57.895 10.94 10.94 40.54 4.85
2464 2820 1.453562 TGTCTGTGCTTTGCTGGCA 60.454 52.632 0.00 0.00 37.36 4.92
2466 2822 1.280746 CGTGTCTGTGCTTTGCTGG 59.719 57.895 0.00 0.00 0.00 4.85
2469 2825 2.425773 CGCGTGTCTGTGCTTTGC 60.426 61.111 0.00 0.00 0.00 3.68
2479 2835 0.596600 TTCTTGGTCTGTCGCGTGTC 60.597 55.000 5.77 0.00 0.00 3.67
2480 2836 0.874607 GTTCTTGGTCTGTCGCGTGT 60.875 55.000 5.77 0.00 0.00 4.49
2490 2846 1.926511 CTGCCGCCATGTTCTTGGTC 61.927 60.000 6.60 0.06 39.11 4.02
2531 2887 1.621814 TCGGGAAGGAACTACAAGTGG 59.378 52.381 0.00 0.00 38.49 4.00
2550 2906 1.520342 GGACCTCATCGCTGCACTC 60.520 63.158 0.00 0.00 0.00 3.51
2552 2908 1.812922 CAGGACCTCATCGCTGCAC 60.813 63.158 0.00 0.00 0.00 4.57
2559 2915 0.769873 ATGCCATCCAGGACCTCATC 59.230 55.000 0.00 0.00 41.22 2.92
2561 2917 2.224821 GATGCCATCCAGGACCTCA 58.775 57.895 0.00 0.00 41.22 3.86
2617 2973 2.805313 ATCACTGCCGAGACCCTCCA 62.805 60.000 0.00 0.00 0.00 3.86
2626 2982 1.965930 GGTGCAACATCACTGCCGA 60.966 57.895 0.00 0.00 39.98 5.54
2627 2983 2.562912 GGTGCAACATCACTGCCG 59.437 61.111 0.00 0.00 39.98 5.69
2631 2987 2.034066 CCCCGGTGCAACATCACT 59.966 61.111 0.98 0.00 39.98 3.41
2634 2990 3.134127 GCTCCCCGGTGCAACATC 61.134 66.667 0.98 0.00 39.98 3.06
2661 3023 2.044806 GCATACTCTCGGTGCCCCAT 62.045 60.000 0.00 0.00 32.88 4.00
2683 3045 0.179111 CGACGGCAAATGGAGCTAGA 60.179 55.000 0.00 0.00 0.00 2.43
2684 3046 1.766143 GCGACGGCAAATGGAGCTAG 61.766 60.000 0.00 0.00 39.62 3.42
2685 3047 1.813753 GCGACGGCAAATGGAGCTA 60.814 57.895 0.00 0.00 39.62 3.32
2686 3048 3.127533 GCGACGGCAAATGGAGCT 61.128 61.111 0.00 0.00 39.62 4.09


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.