Multiple sequence alignment - TraesCS2B01G009500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G009500 chr2B 100.000 6116 0 0 1 6116 5478314 5484429 0.000000e+00 11295.0
1 TraesCS2B01G009500 chr2B 89.365 724 46 13 2875 3579 5543031 5543742 0.000000e+00 881.0
2 TraesCS2B01G009500 chr2B 94.628 484 22 2 2199 2682 5542215 5542694 0.000000e+00 747.0
3 TraesCS2B01G009500 chr2B 83.645 642 71 24 4856 5479 5550908 5551533 1.910000e-159 573.0
4 TraesCS2B01G009500 chr2B 93.233 266 14 3 1880 2145 84047541 84047802 7.430000e-104 388.0
5 TraesCS2B01G009500 chr2B 91.860 258 11 3 2172 2423 84047785 84048038 9.750000e-93 351.0
6 TraesCS2B01G009500 chr2B 87.719 171 11 1 2672 2832 5542851 5543021 2.250000e-44 191.0
7 TraesCS2B01G009500 chr2B 91.463 82 6 1 4453 4533 765397951 765398032 1.800000e-20 111.0
8 TraesCS2B01G009500 chr2B 80.576 139 26 1 4702 4840 5053497 5053360 8.380000e-19 106.0
9 TraesCS2B01G009500 chr2B 90.164 61 5 1 1698 1758 5060052 5059993 1.830000e-10 78.7
10 TraesCS2B01G009500 chr2A 87.508 2946 199 67 5 2846 4616006 4618886 0.000000e+00 3245.0
11 TraesCS2B01G009500 chr2A 84.450 1254 98 47 2 1201 4595211 4596421 0.000000e+00 1146.0
12 TraesCS2B01G009500 chr2A 83.574 1248 103 46 2 1201 4527641 4528834 0.000000e+00 1075.0
13 TraesCS2B01G009500 chr2A 81.044 1245 114 50 3038 4225 4619098 4620277 0.000000e+00 880.0
14 TraesCS2B01G009500 chr2A 81.778 675 72 33 4782 5425 4620442 4621096 9.090000e-143 518.0
15 TraesCS2B01G009500 chr2A 90.476 84 7 1 4446 4528 694471529 694471446 6.480000e-20 110.0
16 TraesCS2B01G009500 chr2A 76.500 200 29 12 5497 5684 4622127 4622320 6.530000e-15 93.5
17 TraesCS2B01G009500 chr2D 86.448 2922 230 79 3 2844 5923145 5925980 0.000000e+00 3049.0
18 TraesCS2B01G009500 chr2D 88.466 919 71 14 4588 5475 6151473 6152387 0.000000e+00 1077.0
19 TraesCS2B01G009500 chr2D 91.310 771 58 4 2874 3639 5926357 5927123 0.000000e+00 1044.0
20 TraesCS2B01G009500 chr2D 95.106 470 17 3 5651 6115 6155824 6156292 0.000000e+00 736.0
21 TraesCS2B01G009500 chr2D 78.980 980 118 50 4782 5692 5927906 5928866 6.830000e-164 588.0
22 TraesCS2B01G009500 chr2D 77.020 557 74 29 5012 5536 6201032 6201566 2.810000e-68 270.0
23 TraesCS2B01G009500 chr2D 89.503 181 18 1 4766 4945 6200837 6201017 1.710000e-55 228.0
24 TraesCS2B01G009500 chr2D 97.170 106 3 0 5516 5621 6155723 6155828 4.870000e-41 180.0
25 TraesCS2B01G009500 chr2D 82.031 128 19 4 3 126 556346989 556347116 8.380000e-19 106.0
26 TraesCS2B01G009500 chrUn 83.203 1149 98 38 5 1106 176237447 176236347 0.000000e+00 965.0
27 TraesCS2B01G009500 chrUn 90.361 83 7 1 4446 4527 50304280 50304198 2.330000e-19 108.0
28 TraesCS2B01G009500 chr3B 94.737 266 10 3 1880 2145 797654702 797654963 1.590000e-110 411.0
29 TraesCS2B01G009500 chr3B 92.636 258 9 3 2172 2423 797654946 797655199 4.510000e-96 363.0
30 TraesCS2B01G009500 chr3B 90.187 214 15 1 1013 1226 754354951 754354744 2.170000e-69 274.0
31 TraesCS2B01G009500 chr3B 89.247 93 8 1 4443 4533 99080299 99080207 1.390000e-21 115.0
32 TraesCS2B01G009500 chr3B 78.626 131 21 6 1 125 149451955 149452084 5.080000e-11 80.5
33 TraesCS2B01G009500 chr4A 94.361 266 11 3 1880 2145 733543426 733543687 7.380000e-109 405.0
34 TraesCS2B01G009500 chr4A 92.248 258 10 5 2172 2423 733543670 733543923 2.100000e-94 357.0
35 TraesCS2B01G009500 chr4A 91.626 203 11 1 1024 1226 714319552 714319356 6.040000e-70 276.0
36 TraesCS2B01G009500 chr7B 91.960 199 10 1 1021 1219 686328799 686328991 2.170000e-69 274.0
37 TraesCS2B01G009500 chr4B 90.187 214 15 1 1013 1226 27847619 27847412 2.170000e-69 274.0
38 TraesCS2B01G009500 chr4B 84.932 146 19 3 3005 3147 596378207 596378352 1.780000e-30 145.0
39 TraesCS2B01G009500 chr4B 90.000 90 7 2 4446 4533 631418705 631418616 1.390000e-21 115.0
40 TraesCS2B01G009500 chr1B 90.385 208 14 1 1013 1220 657390952 657391153 1.010000e-67 268.0
41 TraesCS2B01G009500 chr1B 81.481 135 19 5 2 130 312328291 312328157 8.380000e-19 106.0
42 TraesCS2B01G009500 chr5A 84.672 137 16 5 1 132 616911563 616911699 1.380000e-26 132.0
43 TraesCS2B01G009500 chr5A 89.888 89 8 1 4446 4533 672570377 672570465 5.010000e-21 113.0
44 TraesCS2B01G009500 chr5A 80.882 136 21 4 1 131 622142370 622142235 1.080000e-17 102.0
45 TraesCS2B01G009500 chr5D 82.857 140 23 1 3009 3147 284172286 284172425 2.310000e-24 124.0
46 TraesCS2B01G009500 chr5D 81.102 127 18 4 1 122 350730659 350730534 5.050000e-16 97.1
47 TraesCS2B01G009500 chr6D 89.474 95 7 3 4436 4527 93644391 93644485 3.870000e-22 117.0
48 TraesCS2B01G009500 chr6D 88.764 89 8 2 4440 4527 93644488 93644401 2.330000e-19 108.0
49 TraesCS2B01G009500 chr6D 78.571 154 28 4 489 638 435069350 435069502 5.050000e-16 97.1
50 TraesCS2B01G009500 chr1A 91.358 81 6 1 4450 4530 581594226 581594147 6.480000e-20 110.0
51 TraesCS2B01G009500 chr3D 81.481 135 19 6 3 132 481916029 481915896 8.380000e-19 106.0
52 TraesCS2B01G009500 chr6A 82.114 123 15 7 1 117 17679225 17679346 1.400000e-16 99.0
53 TraesCS2B01G009500 chr6A 96.774 31 1 0 3122 3152 607374793 607374823 1.100000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G009500 chr2B 5478314 5484429 6115 False 11295.000000 11295 100.000000 1 6116 1 chr2B.!!$F1 6115
1 TraesCS2B01G009500 chr2B 5542215 5543742 1527 False 606.333333 881 90.570667 2199 3579 3 chr2B.!!$F4 1380
2 TraesCS2B01G009500 chr2B 5550908 5551533 625 False 573.000000 573 83.645000 4856 5479 1 chr2B.!!$F2 623
3 TraesCS2B01G009500 chr2A 4616006 4622320 6314 False 1184.125000 3245 81.707500 5 5684 4 chr2A.!!$F3 5679
4 TraesCS2B01G009500 chr2A 4595211 4596421 1210 False 1146.000000 1146 84.450000 2 1201 1 chr2A.!!$F2 1199
5 TraesCS2B01G009500 chr2A 4527641 4528834 1193 False 1075.000000 1075 83.574000 2 1201 1 chr2A.!!$F1 1199
6 TraesCS2B01G009500 chr2D 5923145 5928866 5721 False 1560.333333 3049 85.579333 3 5692 3 chr2D.!!$F2 5689
7 TraesCS2B01G009500 chr2D 6151473 6156292 4819 False 664.333333 1077 93.580667 4588 6115 3 chr2D.!!$F3 1527
8 TraesCS2B01G009500 chr2D 6200837 6201566 729 False 249.000000 270 83.261500 4766 5536 2 chr2D.!!$F4 770
9 TraesCS2B01G009500 chrUn 176236347 176237447 1100 True 965.000000 965 83.203000 5 1106 1 chrUn.!!$R2 1101

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
372 392 0.899019 GTCCTCTTCCACTCCTGACC 59.101 60.000 0.00 0.00 0.00 4.02 F
1553 1664 0.324943 GGCTACCAAGAACCAGCAGA 59.675 55.000 0.00 0.00 35.69 4.26 F
1699 1810 0.105224 TCAAGTTCAAGGCCGTTCGA 59.895 50.000 0.00 0.00 0.00 3.71 F
1713 1824 1.067425 CGTTCGATTGGGAGGTGTGTA 60.067 52.381 0.00 0.00 0.00 2.90 F
3344 4010 1.202222 CGAGATGTCTTTTGGCATGCC 60.202 52.381 30.54 30.54 45.98 4.40 F
4363 5117 0.539051 TGGTTGGTTTTGTGCTTGGG 59.461 50.000 0.00 0.00 0.00 4.12 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1693 1804 0.320421 ACACACCTCCCAATCGAACG 60.320 55.000 0.00 0.00 0.00 3.95 R
2802 3104 0.387622 CCGAGCATTGTTGTTGCCTG 60.388 55.000 0.00 0.00 41.06 4.85 R
3379 4045 1.477553 CATAACAGGGCACAATGGCT 58.522 50.000 2.17 0.00 43.20 4.75 R
3606 4275 3.775316 CAACCCCATCCACTCTACTACTT 59.225 47.826 0.00 0.00 0.00 2.24 R
4666 5421 0.321346 TCCACTGCACGATGTCATGT 59.679 50.000 0.00 0.00 0.00 3.21 R
6072 11246 0.036306 ATCACGGCCGACCTTTTTCT 59.964 50.000 35.90 1.64 0.00 2.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
59 60 6.043243 AGGCCTGAGATAAATCGAGGAAAATA 59.957 38.462 3.11 0.00 34.87 1.40
76 89 6.014840 AGGAAAATACGACTAGGACTTGAACA 60.015 38.462 0.00 0.00 0.00 3.18
85 98 1.843851 AGGACTTGAACACTGTTGGGA 59.156 47.619 0.00 0.00 0.00 4.37
122 135 4.047166 TCCTCCTAACCATCCAATCACAT 58.953 43.478 0.00 0.00 0.00 3.21
123 136 4.139786 CCTCCTAACCATCCAATCACATG 58.860 47.826 0.00 0.00 0.00 3.21
126 139 6.320434 TCCTAACCATCCAATCACATGTTA 57.680 37.500 0.00 0.00 0.00 2.41
166 179 8.612619 CCAACTTGTCATTGTCTATGTATAACC 58.387 37.037 0.00 0.00 35.64 2.85
167 180 8.612619 CAACTTGTCATTGTCTATGTATAACCC 58.387 37.037 0.00 0.00 35.64 4.11
180 194 8.774183 TCTATGTATAACCCAAAATACAGTGGT 58.226 33.333 0.00 0.00 40.78 4.16
238 252 2.677228 CGGCCCTCACCCAAAGAT 59.323 61.111 0.00 0.00 0.00 2.40
254 268 9.061435 CACCCAAAGATAGGAGAGATTATTTTC 57.939 37.037 0.00 0.00 0.00 2.29
347 366 6.003326 TCTGTTTCATTAGATGCAAGGAACA 58.997 36.000 0.00 0.00 28.73 3.18
368 388 1.896465 CGAAAGTCCTCTTCCACTCCT 59.104 52.381 0.00 0.00 32.90 3.69
371 391 1.931635 AGTCCTCTTCCACTCCTGAC 58.068 55.000 0.00 0.00 0.00 3.51
372 392 0.899019 GTCCTCTTCCACTCCTGACC 59.101 60.000 0.00 0.00 0.00 4.02
524 561 7.809665 GCACTCCAAATGCTTTCAAAAATAAT 58.190 30.769 0.00 0.00 40.08 1.28
573 625 7.751732 TCATGACTTCCACAAATATTCTTTCG 58.248 34.615 0.00 0.00 0.00 3.46
574 626 7.390440 TCATGACTTCCACAAATATTCTTTCGT 59.610 33.333 0.00 0.00 0.00 3.85
598 650 4.612932 TGAAATTTGGCAAGCACAAAAC 57.387 36.364 0.00 7.77 40.74 2.43
601 653 2.479566 TTTGGCAAGCACAAAACCAA 57.520 40.000 0.00 0.00 38.58 3.67
653 708 7.599998 TCAGAATTTTTAAAGCATTTGAGCTCC 59.400 33.333 12.15 0.00 45.89 4.70
684 740 7.195374 ACTCCACTTCAAGGCATTATACTAA 57.805 36.000 0.00 0.00 0.00 2.24
796 860 9.933723 TTTGACTAAGTGGTAGTAGTATTTTCC 57.066 33.333 0.00 0.00 43.45 3.13
805 869 9.059260 GTGGTAGTAGTATTTTCCTCTAGAGAG 57.941 40.741 21.76 11.20 41.71 3.20
835 899 1.228154 GTCAGAAAGGGCCCACGTT 60.228 57.895 27.56 15.32 0.00 3.99
837 901 2.032071 AGAAAGGGCCCACGTTCG 59.968 61.111 27.56 0.00 34.66 3.95
876 941 2.510238 GCAGCCACTAGACCGCAG 60.510 66.667 0.00 0.00 0.00 5.18
951 1016 2.493973 GCTCGCAGGGTCTCTCTG 59.506 66.667 0.00 0.00 35.49 3.35
964 1029 1.862138 TCTCTGTCCCTCTCCCCCA 60.862 63.158 0.00 0.00 0.00 4.96
1074 1149 4.479993 CTCTCCGCCCAGCCCAAG 62.480 72.222 0.00 0.00 0.00 3.61
1309 1385 1.227438 CCTGTGTTGACCGGACGTT 60.227 57.895 9.46 0.00 0.00 3.99
1335 1411 0.463295 AGATGCGCCCAAGATCACAG 60.463 55.000 4.18 0.00 0.00 3.66
1370 1446 7.429340 CGATTTGTTTACCTGTTAGCATTCATC 59.571 37.037 0.00 0.00 0.00 2.92
1373 1449 6.711277 TGTTTACCTGTTAGCATTCATCTCT 58.289 36.000 0.00 0.00 0.00 3.10
1374 1450 6.595326 TGTTTACCTGTTAGCATTCATCTCTG 59.405 38.462 0.00 0.00 0.00 3.35
1376 1452 3.054875 ACCTGTTAGCATTCATCTCTGCA 60.055 43.478 0.00 0.00 40.88 4.41
1377 1453 3.560481 CCTGTTAGCATTCATCTCTGCAG 59.440 47.826 7.63 7.63 40.88 4.41
1378 1454 4.190001 CTGTTAGCATTCATCTCTGCAGT 58.810 43.478 14.67 0.00 40.88 4.40
1379 1455 5.343307 TGTTAGCATTCATCTCTGCAGTA 57.657 39.130 14.67 3.61 40.88 2.74
1380 1456 5.111989 TGTTAGCATTCATCTCTGCAGTAC 58.888 41.667 14.67 0.00 40.88 2.73
1381 1457 2.819115 AGCATTCATCTCTGCAGTACG 58.181 47.619 14.67 3.87 40.88 3.67
1382 1458 2.167281 AGCATTCATCTCTGCAGTACGT 59.833 45.455 14.67 0.00 40.88 3.57
1383 1459 2.283617 GCATTCATCTCTGCAGTACGTG 59.716 50.000 14.67 8.95 38.28 4.49
1384 1460 2.654749 TTCATCTCTGCAGTACGTGG 57.345 50.000 14.67 0.20 0.00 4.94
1385 1461 1.834188 TCATCTCTGCAGTACGTGGA 58.166 50.000 14.67 2.70 0.00 4.02
1386 1462 2.167662 TCATCTCTGCAGTACGTGGAA 58.832 47.619 14.67 0.00 0.00 3.53
1405 1505 2.802787 ATCTGTAGTATGCGTGCTCC 57.197 50.000 0.00 0.00 0.00 4.70
1495 1603 3.339093 GGGGCCAGGGCTAACTGT 61.339 66.667 13.81 0.00 41.60 3.55
1501 1609 1.000843 GCCAGGGCTAACTGTTTTTGG 59.999 52.381 2.30 1.77 36.75 3.28
1553 1664 0.324943 GGCTACCAAGAACCAGCAGA 59.675 55.000 0.00 0.00 35.69 4.26
1581 1692 2.345244 GATCGGCGAGCCCATCAT 59.655 61.111 15.27 0.00 0.00 2.45
1651 1762 1.376037 CGTCTCCTGCACTTTCCCC 60.376 63.158 0.00 0.00 0.00 4.81
1693 1804 2.155279 GGTCTTCTCAAGTTCAAGGCC 58.845 52.381 0.00 0.00 34.83 5.19
1699 1810 0.105224 TCAAGTTCAAGGCCGTTCGA 59.895 50.000 0.00 0.00 0.00 3.71
1713 1824 1.067425 CGTTCGATTGGGAGGTGTGTA 60.067 52.381 0.00 0.00 0.00 2.90
1728 1839 2.286025 GTGTGTACCGGTTGACAACTTC 59.714 50.000 15.04 0.22 0.00 3.01
1732 1843 1.375551 ACCGGTTGACAACTTCACAC 58.624 50.000 17.52 0.00 32.26 3.82
1736 1847 2.365582 GGTTGACAACTTCACACCACT 58.634 47.619 17.52 0.00 36.32 4.00
1737 1848 2.097466 GGTTGACAACTTCACACCACTG 59.903 50.000 17.52 0.00 36.32 3.66
1748 1859 2.746904 TCACACCACTGTTTTGTGTCTG 59.253 45.455 14.86 3.58 41.04 3.51
1758 1869 7.379529 CCACTGTTTTGTGTCTGATTTCATAAC 59.620 37.037 0.00 0.00 36.30 1.89
1763 1874 8.958043 GTTTTGTGTCTGATTTCATAACTGAAC 58.042 33.333 0.00 0.00 41.05 3.18
1777 1888 6.371271 TCATAACTGAACGAAGCATGATTCAA 59.629 34.615 22.50 5.09 31.00 2.69
1783 1894 8.081633 ACTGAACGAAGCATGATTCAAATAAAA 58.918 29.630 22.50 1.68 31.00 1.52
1784 1895 8.984891 TGAACGAAGCATGATTCAAATAAAAT 57.015 26.923 22.50 0.24 0.00 1.82
1785 1896 8.862074 TGAACGAAGCATGATTCAAATAAAATG 58.138 29.630 22.50 6.25 0.00 2.32
1788 1899 9.853555 ACGAAGCATGATTCAAATAAAATGTTA 57.146 25.926 22.50 0.00 0.00 2.41
1835 1956 6.412362 AGGGCAGACTGTAGAATTACATAG 57.588 41.667 3.99 0.00 39.00 2.23
1836 1957 5.900123 AGGGCAGACTGTAGAATTACATAGT 59.100 40.000 3.99 0.00 39.00 2.12
1871 1992 3.574284 TGCTCACAAATGTTACATGGC 57.426 42.857 0.00 0.00 0.00 4.40
1878 1999 5.534278 TCACAAATGTTACATGGCTCAAAGA 59.466 36.000 0.00 0.00 0.00 2.52
1916 2037 2.441001 AGCATAGGGATTGAGGTTGAGG 59.559 50.000 0.00 0.00 0.00 3.86
1951 2072 6.760298 ACTATGCAACATCAGTATTCTCACAG 59.240 38.462 0.00 0.00 0.00 3.66
1969 2090 8.149973 TCTCACAGTCCTTTTACAATGTAAAC 57.850 34.615 17.14 7.68 0.00 2.01
2107 2228 7.709269 TTTGATAGTGACAAGAACAGTACAC 57.291 36.000 0.00 0.00 0.00 2.90
2108 2229 6.399639 TGATAGTGACAAGAACAGTACACA 57.600 37.500 0.00 0.00 0.00 3.72
2145 2269 9.216117 ACTATTATATTGGAGCGAAATACAACC 57.784 33.333 0.00 0.00 0.00 3.77
2146 2270 6.533819 TTATATTGGAGCGAAATACAACCG 57.466 37.500 0.00 0.00 0.00 4.44
2188 2312 4.469657 TCAACTATTGGGCAAAGTCAACT 58.530 39.130 0.00 0.00 0.00 3.16
2190 2314 5.705441 TCAACTATTGGGCAAAGTCAACTAG 59.295 40.000 0.00 0.00 0.00 2.57
2309 2433 8.855804 TCCCAAATTTCTATACCTAGTCTCTT 57.144 34.615 0.00 0.00 0.00 2.85
2565 2690 6.711645 GTCCCTCGGGTATATCTCTGATATAC 59.288 46.154 20.77 20.77 36.97 1.47
2661 2786 9.349713 GATGTGGGAAATCTGTTTTATGGTATA 57.650 33.333 0.00 0.00 0.00 1.47
2802 3104 4.345547 ACCCTTTAGATCACCTAGCTAAGC 59.654 45.833 0.00 0.00 37.38 3.09
2817 3119 2.331194 CTAAGCAGGCAACAACAATGC 58.669 47.619 0.00 0.00 43.08 3.56
2850 3483 9.573166 AGAATGTTTATTGCTATAATGTGCCTA 57.427 29.630 1.38 0.00 0.00 3.93
2862 3495 7.380602 GCTATAATGTGCCTAATCTTTGCTTTG 59.619 37.037 0.00 0.00 0.00 2.77
3048 3705 2.396590 TAAGCCCGCAAAAGTAGGAG 57.603 50.000 0.00 0.00 0.00 3.69
3095 3752 5.691754 GCTAAACAAATGCACAACTAAGCTT 59.308 36.000 3.48 3.48 0.00 3.74
3194 3851 7.951530 ATTCTTAACTGCCTTGAACATTTTG 57.048 32.000 0.00 0.00 0.00 2.44
3200 3857 4.592778 ACTGCCTTGAACATTTTGGGTAAT 59.407 37.500 0.00 0.00 0.00 1.89
3343 4009 1.739466 TCGAGATGTCTTTTGGCATGC 59.261 47.619 9.90 9.90 45.98 4.06
3344 4010 1.202222 CGAGATGTCTTTTGGCATGCC 60.202 52.381 30.54 30.54 45.98 4.40
3379 4045 9.578576 AAATTTGCCTGCTATATGATCTTTCTA 57.421 29.630 0.00 0.00 0.00 2.10
3387 4053 7.683578 TGCTATATGATCTTTCTAGCCATTGT 58.316 34.615 14.82 0.00 35.13 2.71
3478 4144 9.232473 TGCCACTATTGTTTTACATGTGTTATA 57.768 29.630 9.11 0.00 0.00 0.98
3563 4232 3.401032 CCCCCTGACAGGTCTAGTT 57.599 57.895 20.24 0.00 31.93 2.24
3564 4233 2.544844 CCCCCTGACAGGTCTAGTTA 57.455 55.000 20.24 0.00 31.93 2.24
3565 4234 2.108970 CCCCCTGACAGGTCTAGTTAC 58.891 57.143 20.24 0.00 31.93 2.50
3566 4235 2.559026 CCCCCTGACAGGTCTAGTTACA 60.559 54.545 20.24 0.00 31.93 2.41
3579 4248 6.269307 AGGTCTAGTTACAACTCCAAAGCTTA 59.731 38.462 0.00 0.00 40.37 3.09
3582 4251 9.000486 GTCTAGTTACAACTCCAAAGCTTATTT 58.000 33.333 0.00 0.00 40.37 1.40
3606 4275 8.598202 TTGTGTAGAGGAATACCAACTATGTA 57.402 34.615 0.00 0.00 38.94 2.29
3647 4352 3.931907 TGGGTTGGATTGACTATCTGG 57.068 47.619 0.00 0.00 33.53 3.86
3659 4385 5.290493 TGACTATCTGGTGTGAACAAGTT 57.710 39.130 0.00 0.00 0.00 2.66
3660 4386 5.297547 TGACTATCTGGTGTGAACAAGTTC 58.702 41.667 6.01 6.01 39.91 3.01
3667 4393 4.839121 TGGTGTGAACAAGTTCTTACACT 58.161 39.130 23.82 0.00 41.89 3.55
3669 4395 4.873827 GGTGTGAACAAGTTCTTACACTGA 59.126 41.667 23.82 0.74 41.89 3.41
3671 4397 6.704493 GGTGTGAACAAGTTCTTACACTGATA 59.296 38.462 23.82 0.00 41.89 2.15
3675 4401 8.276325 GTGAACAAGTTCTTACACTGATAGTTG 58.724 37.037 13.49 0.00 40.14 3.16
3716 4445 4.767578 ATCATCCAAGACAGTGCTACAT 57.232 40.909 0.00 0.00 0.00 2.29
3722 4451 5.479306 TCCAAGACAGTGCTACATAAGAAC 58.521 41.667 0.00 0.00 33.26 3.01
3764 4493 5.798125 TTTGGTATGAAACATGCTTTGGA 57.202 34.783 0.00 0.00 0.00 3.53
3765 4494 5.999205 TTGGTATGAAACATGCTTTGGAT 57.001 34.783 0.00 0.00 0.00 3.41
3771 4500 7.223387 GGTATGAAACATGCTTTGGATTGATTC 59.777 37.037 0.00 0.00 0.00 2.52
3772 4501 5.481105 TGAAACATGCTTTGGATTGATTCC 58.519 37.500 0.00 0.00 45.69 3.01
3790 4519 7.062749 TGATTCCGTTATATAGAGCAAAGGT 57.937 36.000 0.00 0.00 0.00 3.50
3804 4533 3.815407 AAGGTTGCAGTGGGCTGGG 62.815 63.158 0.00 0.00 45.15 4.45
3812 4541 4.603535 GTGGGCTGGGGTTGTGCT 62.604 66.667 0.00 0.00 0.00 4.40
3833 4574 3.408634 TCAAAGTACCAGGTAGCTTTGC 58.591 45.455 28.65 10.50 44.17 3.68
3852 4593 4.778213 TGCTTAGATGGGCTAGATTGTT 57.222 40.909 0.00 0.00 0.00 2.83
3863 4604 5.045213 TGGGCTAGATTGTTGTGGAATCTAA 60.045 40.000 0.00 0.00 40.34 2.10
3868 4609 4.702131 AGATTGTTGTGGAATCTAACAGGC 59.298 41.667 0.00 0.00 38.20 4.85
3870 4611 3.411446 TGTTGTGGAATCTAACAGGCTG 58.589 45.455 14.16 14.16 31.34 4.85
3872 4613 1.985159 TGTGGAATCTAACAGGCTGGT 59.015 47.619 20.34 16.10 0.00 4.00
3889 4630 5.533903 AGGCTGGTTCTTAGATGCATATTTG 59.466 40.000 0.00 0.00 0.00 2.32
3895 4636 9.237187 TGGTTCTTAGATGCATATTTGTACAAA 57.763 29.630 22.58 22.58 34.46 2.83
3901 4642 9.688091 TTAGATGCATATTTGTACAAAGGGTTA 57.312 29.630 24.22 13.23 33.32 2.85
3902 4643 7.996385 AGATGCATATTTGTACAAAGGGTTAC 58.004 34.615 24.22 12.71 33.32 2.50
3903 4644 6.518208 TGCATATTTGTACAAAGGGTTACC 57.482 37.500 24.22 10.43 33.32 2.85
3945 4686 7.631717 AAAAACTGGCCTATTTCTAGACATC 57.368 36.000 3.32 0.00 0.00 3.06
3946 4687 4.592485 ACTGGCCTATTTCTAGACATCG 57.408 45.455 3.32 0.00 0.00 3.84
3950 4691 3.982058 GGCCTATTTCTAGACATCGTTCG 59.018 47.826 0.00 0.00 0.00 3.95
3966 4707 8.138365 ACATCGTTCGTGCATATTTAGTTTAT 57.862 30.769 0.00 0.00 0.00 1.40
3977 4719 8.739039 TGCATATTTAGTTTATTCTGTGCTTGT 58.261 29.630 0.00 0.00 0.00 3.16
4004 4749 2.545526 CACTGTTACACTGCCTGAACTG 59.454 50.000 0.00 0.00 0.00 3.16
4023 4768 6.775629 TGAACTGTTAAGGGCTTTAATTGACT 59.224 34.615 5.05 0.00 33.99 3.41
4026 4771 7.433680 ACTGTTAAGGGCTTTAATTGACTTTG 58.566 34.615 5.05 0.00 33.99 2.77
4031 4776 7.833285 AAGGGCTTTAATTGACTTTGAGTTA 57.167 32.000 0.00 0.00 0.00 2.24
4037 4782 8.388103 GCTTTAATTGACTTTGAGTTATCGCTA 58.612 33.333 0.00 0.00 0.00 4.26
4049 4794 9.594478 TTTGAGTTATCGCTATTAAGATGACAA 57.406 29.630 3.81 0.00 36.29 3.18
4050 4795 9.594478 TTGAGTTATCGCTATTAAGATGACAAA 57.406 29.630 3.81 0.00 36.29 2.83
4052 4797 9.250624 GAGTTATCGCTATTAAGATGACAAACT 57.749 33.333 3.81 0.00 36.29 2.66
4053 4798 9.601217 AGTTATCGCTATTAAGATGACAAACTT 57.399 29.630 3.81 4.22 36.29 2.66
4054 4799 9.851043 GTTATCGCTATTAAGATGACAAACTTC 57.149 33.333 2.31 0.00 34.68 3.01
4055 4800 6.903883 TCGCTATTAAGATGACAAACTTCC 57.096 37.500 2.31 0.00 0.00 3.46
4056 4801 5.815740 TCGCTATTAAGATGACAAACTTCCC 59.184 40.000 2.31 0.00 0.00 3.97
4057 4802 5.584649 CGCTATTAAGATGACAAACTTCCCA 59.415 40.000 2.31 0.00 0.00 4.37
4058 4803 6.238211 CGCTATTAAGATGACAAACTTCCCAG 60.238 42.308 2.31 1.23 0.00 4.45
4059 4804 6.823689 GCTATTAAGATGACAAACTTCCCAGA 59.176 38.462 2.31 0.00 0.00 3.86
4060 4805 7.336931 GCTATTAAGATGACAAACTTCCCAGAA 59.663 37.037 2.31 0.00 0.00 3.02
4061 4806 7.693969 ATTAAGATGACAAACTTCCCAGAAG 57.306 36.000 2.83 2.83 0.00 2.85
4062 4807 3.416156 AGATGACAAACTTCCCAGAAGC 58.584 45.455 4.28 0.00 0.00 3.86
4063 4808 2.727123 TGACAAACTTCCCAGAAGCA 57.273 45.000 4.28 0.00 0.00 3.91
4064 4809 2.575532 TGACAAACTTCCCAGAAGCAG 58.424 47.619 4.28 0.00 0.00 4.24
4065 4810 2.172505 TGACAAACTTCCCAGAAGCAGA 59.827 45.455 4.28 0.00 0.00 4.26
4066 4811 3.214328 GACAAACTTCCCAGAAGCAGAA 58.786 45.455 4.28 0.00 0.00 3.02
4077 4822 6.548321 TCCCAGAAGCAGAATAACCTTTTTA 58.452 36.000 0.00 0.00 0.00 1.52
4120 4868 8.491950 TGCTAGTTTGTTTTGTTTTCTTGTTTC 58.508 29.630 0.00 0.00 0.00 2.78
4132 4883 7.535139 TGTTTTCTTGTTTCTTTCCACTACAG 58.465 34.615 0.00 0.00 0.00 2.74
4135 4886 5.057149 TCTTGTTTCTTTCCACTACAGAGC 58.943 41.667 0.00 0.00 0.00 4.09
4141 4892 1.180029 TTCCACTACAGAGCGGGTAC 58.820 55.000 0.00 0.00 0.00 3.34
4162 4913 7.227512 GGGTACATCTATGTTGGAAAGATGAAG 59.772 40.741 16.21 0.00 46.22 3.02
4170 4921 1.425066 TGGAAAGATGAAGGGCACACT 59.575 47.619 0.00 0.00 0.00 3.55
4175 4926 5.885912 GGAAAGATGAAGGGCACACTATTTA 59.114 40.000 0.00 0.00 0.00 1.40
4249 5003 8.780846 ATTTGACATTAACATACCGTTGTAGA 57.219 30.769 0.00 0.00 38.63 2.59
4250 5004 8.780846 TTTGACATTAACATACCGTTGTAGAT 57.219 30.769 0.00 0.00 38.63 1.98
4251 5005 8.780846 TTGACATTAACATACCGTTGTAGATT 57.219 30.769 0.00 0.00 38.63 2.40
4252 5006 9.872721 TTGACATTAACATACCGTTGTAGATTA 57.127 29.630 0.00 0.00 38.63 1.75
4253 5007 9.872721 TGACATTAACATACCGTTGTAGATTAA 57.127 29.630 0.00 0.00 38.63 1.40
4261 5015 9.221933 ACATACCGTTGTAGATTAATGTTTTCA 57.778 29.630 0.00 0.00 0.00 2.69
4262 5016 9.702726 CATACCGTTGTAGATTAATGTTTTCAG 57.297 33.333 0.00 0.00 0.00 3.02
4263 5017 7.972832 ACCGTTGTAGATTAATGTTTTCAGA 57.027 32.000 0.00 0.00 0.00 3.27
4264 5018 8.561738 ACCGTTGTAGATTAATGTTTTCAGAT 57.438 30.769 0.00 0.00 0.00 2.90
4265 5019 9.661563 ACCGTTGTAGATTAATGTTTTCAGATA 57.338 29.630 0.00 0.00 0.00 1.98
4267 5021 9.638300 CGTTGTAGATTAATGTTTTCAGATAGC 57.362 33.333 0.00 0.00 0.00 2.97
4321 5075 8.199449 ACCATGTCTAAGATAATTGCAAAATGG 58.801 33.333 1.71 0.00 35.54 3.16
4322 5076 7.654520 CCATGTCTAAGATAATTGCAAAATGGG 59.345 37.037 1.71 0.00 0.00 4.00
4323 5077 7.716799 TGTCTAAGATAATTGCAAAATGGGT 57.283 32.000 1.71 0.00 0.00 4.51
4324 5078 7.546358 TGTCTAAGATAATTGCAAAATGGGTG 58.454 34.615 1.71 0.00 0.00 4.61
4325 5079 7.395772 TGTCTAAGATAATTGCAAAATGGGTGA 59.604 33.333 1.71 0.00 0.00 4.02
4326 5080 8.250332 GTCTAAGATAATTGCAAAATGGGTGAA 58.750 33.333 1.71 0.00 0.00 3.18
4327 5081 8.980596 TCTAAGATAATTGCAAAATGGGTGAAT 58.019 29.630 1.71 0.00 0.00 2.57
4330 5084 9.603921 AAGATAATTGCAAAATGGGTGAATAAG 57.396 29.630 1.71 0.00 0.00 1.73
4331 5085 7.712205 AGATAATTGCAAAATGGGTGAATAAGC 59.288 33.333 1.71 0.00 0.00 3.09
4332 5086 4.888326 TTGCAAAATGGGTGAATAAGCT 57.112 36.364 0.00 0.00 0.00 3.74
4333 5087 5.991933 TTGCAAAATGGGTGAATAAGCTA 57.008 34.783 0.00 0.00 0.00 3.32
4334 5088 5.991933 TGCAAAATGGGTGAATAAGCTAA 57.008 34.783 0.00 0.00 0.00 3.09
4335 5089 5.964758 TGCAAAATGGGTGAATAAGCTAAG 58.035 37.500 0.00 0.00 0.00 2.18
4336 5090 5.105392 TGCAAAATGGGTGAATAAGCTAAGG 60.105 40.000 0.00 0.00 0.00 2.69
4337 5091 5.105351 GCAAAATGGGTGAATAAGCTAAGGT 60.105 40.000 0.00 0.00 0.00 3.50
4338 5092 6.096282 GCAAAATGGGTGAATAAGCTAAGGTA 59.904 38.462 0.00 0.00 0.00 3.08
4339 5093 7.363443 GCAAAATGGGTGAATAAGCTAAGGTAA 60.363 37.037 0.00 0.00 0.00 2.85
4340 5094 8.527810 CAAAATGGGTGAATAAGCTAAGGTAAA 58.472 33.333 0.00 0.00 0.00 2.01
4341 5095 7.881775 AATGGGTGAATAAGCTAAGGTAAAG 57.118 36.000 0.00 0.00 0.00 1.85
4342 5096 6.630203 TGGGTGAATAAGCTAAGGTAAAGA 57.370 37.500 0.00 0.00 0.00 2.52
4343 5097 7.208064 TGGGTGAATAAGCTAAGGTAAAGAT 57.792 36.000 0.00 0.00 0.00 2.40
4344 5098 7.639378 TGGGTGAATAAGCTAAGGTAAAGATT 58.361 34.615 0.00 0.00 0.00 2.40
4345 5099 7.556275 TGGGTGAATAAGCTAAGGTAAAGATTG 59.444 37.037 0.00 0.00 0.00 2.67
4346 5100 7.013369 GGGTGAATAAGCTAAGGTAAAGATTGG 59.987 40.741 0.00 0.00 0.00 3.16
4347 5101 7.556635 GGTGAATAAGCTAAGGTAAAGATTGGT 59.443 37.037 0.00 0.00 0.00 3.67
4348 5102 8.957466 GTGAATAAGCTAAGGTAAAGATTGGTT 58.043 33.333 0.00 0.00 0.00 3.67
4349 5103 8.956426 TGAATAAGCTAAGGTAAAGATTGGTTG 58.044 33.333 0.00 0.00 0.00 3.77
4350 5104 7.881775 ATAAGCTAAGGTAAAGATTGGTTGG 57.118 36.000 0.00 0.00 0.00 3.77
4351 5105 5.256806 AGCTAAGGTAAAGATTGGTTGGT 57.743 39.130 0.00 0.00 0.00 3.67
4352 5106 5.641155 AGCTAAGGTAAAGATTGGTTGGTT 58.359 37.500 0.00 0.00 0.00 3.67
4353 5107 6.075315 AGCTAAGGTAAAGATTGGTTGGTTT 58.925 36.000 0.00 0.00 0.00 3.27
4354 5108 6.553476 AGCTAAGGTAAAGATTGGTTGGTTTT 59.447 34.615 0.00 0.00 0.00 2.43
4355 5109 6.645003 GCTAAGGTAAAGATTGGTTGGTTTTG 59.355 38.462 0.00 0.00 0.00 2.44
4356 5110 6.553953 AAGGTAAAGATTGGTTGGTTTTGT 57.446 33.333 0.00 0.00 0.00 2.83
4357 5111 5.912892 AGGTAAAGATTGGTTGGTTTTGTG 58.087 37.500 0.00 0.00 0.00 3.33
4358 5112 4.509970 GGTAAAGATTGGTTGGTTTTGTGC 59.490 41.667 0.00 0.00 0.00 4.57
4359 5113 4.486125 AAAGATTGGTTGGTTTTGTGCT 57.514 36.364 0.00 0.00 0.00 4.40
4360 5114 4.486125 AAGATTGGTTGGTTTTGTGCTT 57.514 36.364 0.00 0.00 0.00 3.91
4361 5115 3.795877 AGATTGGTTGGTTTTGTGCTTG 58.204 40.909 0.00 0.00 0.00 4.01
4362 5116 2.393271 TTGGTTGGTTTTGTGCTTGG 57.607 45.000 0.00 0.00 0.00 3.61
4363 5117 0.539051 TGGTTGGTTTTGTGCTTGGG 59.461 50.000 0.00 0.00 0.00 4.12
4364 5118 0.539518 GGTTGGTTTTGTGCTTGGGT 59.460 50.000 0.00 0.00 0.00 4.51
4365 5119 1.472552 GGTTGGTTTTGTGCTTGGGTC 60.473 52.381 0.00 0.00 0.00 4.46
4366 5120 1.480545 GTTGGTTTTGTGCTTGGGTCT 59.519 47.619 0.00 0.00 0.00 3.85
4367 5121 1.398692 TGGTTTTGTGCTTGGGTCTC 58.601 50.000 0.00 0.00 0.00 3.36
4368 5122 1.341482 TGGTTTTGTGCTTGGGTCTCA 60.341 47.619 0.00 0.00 0.00 3.27
4369 5123 1.963515 GGTTTTGTGCTTGGGTCTCAT 59.036 47.619 0.00 0.00 0.00 2.90
4370 5124 2.365293 GGTTTTGTGCTTGGGTCTCATT 59.635 45.455 0.00 0.00 0.00 2.57
4371 5125 3.181466 GGTTTTGTGCTTGGGTCTCATTT 60.181 43.478 0.00 0.00 0.00 2.32
4372 5126 3.731652 TTTGTGCTTGGGTCTCATTTG 57.268 42.857 0.00 0.00 0.00 2.32
4373 5127 2.655090 TGTGCTTGGGTCTCATTTGA 57.345 45.000 0.00 0.00 0.00 2.69
4374 5128 2.229792 TGTGCTTGGGTCTCATTTGAC 58.770 47.619 0.00 0.00 36.31 3.18
4386 5140 5.703876 GTCTCATTTGACCTTAGCTTTTGG 58.296 41.667 0.00 0.00 0.00 3.28
4387 5141 4.218417 TCTCATTTGACCTTAGCTTTTGGC 59.782 41.667 0.00 0.00 42.19 4.52
4396 5150 3.062639 GCTTTTGGCTGCATGGGT 58.937 55.556 0.50 0.00 38.06 4.51
4397 5151 1.372307 GCTTTTGGCTGCATGGGTT 59.628 52.632 0.50 0.00 38.06 4.11
4398 5152 0.607620 GCTTTTGGCTGCATGGGTTA 59.392 50.000 0.50 0.00 38.06 2.85
4399 5153 1.404583 GCTTTTGGCTGCATGGGTTAG 60.405 52.381 0.50 0.00 38.06 2.34
4400 5154 1.895131 CTTTTGGCTGCATGGGTTAGT 59.105 47.619 0.50 0.00 0.00 2.24
4401 5155 2.008242 TTTGGCTGCATGGGTTAGTT 57.992 45.000 0.50 0.00 0.00 2.24
4402 5156 2.008242 TTGGCTGCATGGGTTAGTTT 57.992 45.000 0.50 0.00 0.00 2.66
4403 5157 1.255882 TGGCTGCATGGGTTAGTTTG 58.744 50.000 0.50 0.00 0.00 2.93
4404 5158 1.202989 TGGCTGCATGGGTTAGTTTGA 60.203 47.619 0.50 0.00 0.00 2.69
4405 5159 2.102578 GGCTGCATGGGTTAGTTTGAT 58.897 47.619 0.50 0.00 0.00 2.57
4406 5160 3.287222 GGCTGCATGGGTTAGTTTGATA 58.713 45.455 0.50 0.00 0.00 2.15
4407 5161 3.891366 GGCTGCATGGGTTAGTTTGATAT 59.109 43.478 0.50 0.00 0.00 1.63
4408 5162 4.342092 GGCTGCATGGGTTAGTTTGATATT 59.658 41.667 0.50 0.00 0.00 1.28
4409 5163 5.284079 GCTGCATGGGTTAGTTTGATATTG 58.716 41.667 0.00 0.00 0.00 1.90
4410 5164 5.261209 TGCATGGGTTAGTTTGATATTGC 57.739 39.130 0.00 0.00 0.00 3.56
4411 5165 4.708909 TGCATGGGTTAGTTTGATATTGCA 59.291 37.500 0.00 0.00 0.00 4.08
4412 5166 5.186603 TGCATGGGTTAGTTTGATATTGCAA 59.813 36.000 0.00 0.00 0.00 4.08
4413 5167 6.127111 TGCATGGGTTAGTTTGATATTGCAAT 60.127 34.615 17.56 17.56 0.00 3.56
4414 5168 7.069208 TGCATGGGTTAGTTTGATATTGCAATA 59.931 33.333 20.95 20.95 0.00 1.90
4415 5169 7.596248 GCATGGGTTAGTTTGATATTGCAATAG 59.404 37.037 22.76 6.15 0.00 1.73
4416 5170 8.632679 CATGGGTTAGTTTGATATTGCAATAGT 58.367 33.333 22.76 12.01 0.00 2.12
4417 5171 8.588290 TGGGTTAGTTTGATATTGCAATAGTT 57.412 30.769 22.76 8.66 0.00 2.24
4418 5172 8.465999 TGGGTTAGTTTGATATTGCAATAGTTG 58.534 33.333 22.76 0.00 0.00 3.16
4419 5173 8.466798 GGGTTAGTTTGATATTGCAATAGTTGT 58.533 33.333 22.76 7.58 0.00 3.32
4420 5174 9.855021 GGTTAGTTTGATATTGCAATAGTTGTT 57.145 29.630 22.76 7.21 0.00 2.83
4428 5182 9.448438 TGATATTGCAATAGTTGTTGTAGAAGT 57.552 29.630 22.76 2.55 0.00 3.01
4429 5183 9.708222 GATATTGCAATAGTTGTTGTAGAAGTG 57.292 33.333 22.76 0.00 0.00 3.16
4430 5184 5.356882 TGCAATAGTTGTTGTAGAAGTGC 57.643 39.130 0.00 0.00 0.00 4.40
4431 5185 5.063204 TGCAATAGTTGTTGTAGAAGTGCT 58.937 37.500 0.00 0.00 0.00 4.40
4432 5186 5.530915 TGCAATAGTTGTTGTAGAAGTGCTT 59.469 36.000 0.00 0.00 0.00 3.91
4433 5187 6.039270 TGCAATAGTTGTTGTAGAAGTGCTTT 59.961 34.615 0.00 0.00 0.00 3.51
4434 5188 6.918022 GCAATAGTTGTTGTAGAAGTGCTTTT 59.082 34.615 0.00 0.00 0.00 2.27
4435 5189 7.435192 GCAATAGTTGTTGTAGAAGTGCTTTTT 59.565 33.333 0.00 0.00 0.00 1.94
4436 5190 9.944663 CAATAGTTGTTGTAGAAGTGCTTTTTA 57.055 29.630 0.00 0.00 0.00 1.52
4452 5206 9.449719 AGTGCTTTTTATTATATAATCCCTCCG 57.550 33.333 11.28 0.08 0.00 4.63
4453 5207 9.227777 GTGCTTTTTATTATATAATCCCTCCGT 57.772 33.333 11.28 0.00 0.00 4.69
4454 5208 9.802039 TGCTTTTTATTATATAATCCCTCCGTT 57.198 29.630 11.28 0.00 0.00 4.44
4464 5218 6.704056 ATAATCCCTCCGTTCCATAATTCT 57.296 37.500 0.00 0.00 0.00 2.40
4465 5219 5.388599 AATCCCTCCGTTCCATAATTCTT 57.611 39.130 0.00 0.00 0.00 2.52
4466 5220 4.150897 TCCCTCCGTTCCATAATTCTTG 57.849 45.455 0.00 0.00 0.00 3.02
4467 5221 3.521937 TCCCTCCGTTCCATAATTCTTGT 59.478 43.478 0.00 0.00 0.00 3.16
4468 5222 3.877508 CCCTCCGTTCCATAATTCTTGTC 59.122 47.826 0.00 0.00 0.00 3.18
4469 5223 3.555956 CCTCCGTTCCATAATTCTTGTCG 59.444 47.826 0.00 0.00 0.00 4.35
4470 5224 4.181578 CTCCGTTCCATAATTCTTGTCGT 58.818 43.478 0.00 0.00 0.00 4.34
4471 5225 3.930229 TCCGTTCCATAATTCTTGTCGTG 59.070 43.478 0.00 0.00 0.00 4.35
4472 5226 3.063452 CCGTTCCATAATTCTTGTCGTGG 59.937 47.826 0.00 0.00 0.00 4.94
4473 5227 3.682858 CGTTCCATAATTCTTGTCGTGGT 59.317 43.478 0.00 0.00 0.00 4.16
4474 5228 4.153475 CGTTCCATAATTCTTGTCGTGGTT 59.847 41.667 0.00 0.00 0.00 3.67
4475 5229 5.334569 CGTTCCATAATTCTTGTCGTGGTTT 60.335 40.000 0.00 0.00 0.00 3.27
4476 5230 6.443792 GTTCCATAATTCTTGTCGTGGTTTT 58.556 36.000 0.00 0.00 0.00 2.43
4477 5231 7.571613 CGTTCCATAATTCTTGTCGTGGTTTTA 60.572 37.037 0.00 0.00 0.00 1.52
4478 5232 7.372451 TCCATAATTCTTGTCGTGGTTTTAG 57.628 36.000 0.00 0.00 0.00 1.85
4479 5233 6.938030 TCCATAATTCTTGTCGTGGTTTTAGT 59.062 34.615 0.00 0.00 0.00 2.24
4480 5234 7.446013 TCCATAATTCTTGTCGTGGTTTTAGTT 59.554 33.333 0.00 0.00 0.00 2.24
4481 5235 8.079809 CCATAATTCTTGTCGTGGTTTTAGTTT 58.920 33.333 0.00 0.00 0.00 2.66
4487 5241 8.844441 TCTTGTCGTGGTTTTAGTTTAATTTG 57.156 30.769 0.00 0.00 0.00 2.32
4488 5242 8.675504 TCTTGTCGTGGTTTTAGTTTAATTTGA 58.324 29.630 0.00 0.00 0.00 2.69
4489 5243 9.291664 CTTGTCGTGGTTTTAGTTTAATTTGAA 57.708 29.630 0.00 0.00 0.00 2.69
4490 5244 8.617761 TGTCGTGGTTTTAGTTTAATTTGAAC 57.382 30.769 0.00 0.00 0.00 3.18
4491 5245 7.428761 TGTCGTGGTTTTAGTTTAATTTGAACG 59.571 33.333 0.00 0.00 32.38 3.95
4492 5246 7.639461 GTCGTGGTTTTAGTTTAATTTGAACGA 59.361 33.333 0.00 0.00 32.38 3.85
4493 5247 8.180267 TCGTGGTTTTAGTTTAATTTGAACGAA 58.820 29.630 0.00 0.00 31.68 3.85
4494 5248 8.796278 CGTGGTTTTAGTTTAATTTGAACGAAA 58.204 29.630 7.81 7.81 32.38 3.46
4500 5254 6.799786 AGTTTAATTTGAACGAAAACCACG 57.200 33.333 0.00 0.00 31.87 4.94
4501 5255 6.553524 AGTTTAATTTGAACGAAAACCACGA 58.446 32.000 0.00 0.00 31.87 4.35
4502 5256 6.469915 AGTTTAATTTGAACGAAAACCACGAC 59.530 34.615 0.00 0.00 31.87 4.34
4503 5257 4.625972 AATTTGAACGAAAACCACGACT 57.374 36.364 0.00 0.00 34.70 4.18
4504 5258 5.738118 AATTTGAACGAAAACCACGACTA 57.262 34.783 0.00 0.00 34.70 2.59
4505 5259 4.782252 TTTGAACGAAAACCACGACTAG 57.218 40.909 0.00 0.00 34.70 2.57
4506 5260 3.713858 TGAACGAAAACCACGACTAGA 57.286 42.857 0.00 0.00 34.70 2.43
4507 5261 4.044336 TGAACGAAAACCACGACTAGAA 57.956 40.909 0.00 0.00 34.70 2.10
4508 5262 4.624015 TGAACGAAAACCACGACTAGAAT 58.376 39.130 0.00 0.00 34.70 2.40
4509 5263 5.051816 TGAACGAAAACCACGACTAGAATT 58.948 37.500 0.00 0.00 34.70 2.17
4510 5264 6.215121 TGAACGAAAACCACGACTAGAATTA 58.785 36.000 0.00 0.00 34.70 1.40
4511 5265 6.869913 TGAACGAAAACCACGACTAGAATTAT 59.130 34.615 0.00 0.00 34.70 1.28
4512 5266 6.642683 ACGAAAACCACGACTAGAATTATG 57.357 37.500 0.00 0.00 34.70 1.90
4513 5267 5.579511 ACGAAAACCACGACTAGAATTATGG 59.420 40.000 0.00 0.00 34.70 2.74
4514 5268 5.808540 CGAAAACCACGACTAGAATTATGGA 59.191 40.000 0.00 0.00 0.00 3.41
4515 5269 6.311935 CGAAAACCACGACTAGAATTATGGAA 59.688 38.462 0.00 0.00 0.00 3.53
4516 5270 7.148540 CGAAAACCACGACTAGAATTATGGAAA 60.149 37.037 0.00 0.00 0.00 3.13
4517 5271 7.611213 AAACCACGACTAGAATTATGGAAAG 57.389 36.000 0.00 0.00 0.00 2.62
4518 5272 5.671493 ACCACGACTAGAATTATGGAAAGG 58.329 41.667 0.00 0.00 0.00 3.11
4519 5273 5.424252 ACCACGACTAGAATTATGGAAAGGA 59.576 40.000 0.00 0.00 0.00 3.36
4520 5274 5.986135 CCACGACTAGAATTATGGAAAGGAG 59.014 44.000 0.00 0.00 0.00 3.69
4521 5275 5.986135 CACGACTAGAATTATGGAAAGGAGG 59.014 44.000 0.00 0.00 0.00 4.30
4522 5276 5.070580 ACGACTAGAATTATGGAAAGGAGGG 59.929 44.000 0.00 0.00 0.00 4.30
4523 5277 5.304614 CGACTAGAATTATGGAAAGGAGGGA 59.695 44.000 0.00 0.00 0.00 4.20
4524 5278 6.517529 CGACTAGAATTATGGAAAGGAGGGAG 60.518 46.154 0.00 0.00 0.00 4.30
4525 5279 6.213525 ACTAGAATTATGGAAAGGAGGGAGT 58.786 40.000 0.00 0.00 0.00 3.85
4526 5280 7.371043 ACTAGAATTATGGAAAGGAGGGAGTA 58.629 38.462 0.00 0.00 0.00 2.59
4527 5281 6.502074 AGAATTATGGAAAGGAGGGAGTAC 57.498 41.667 0.00 0.00 0.00 2.73
4528 5282 6.213525 AGAATTATGGAAAGGAGGGAGTACT 58.786 40.000 0.00 0.00 0.00 2.73
4529 5283 7.371043 AGAATTATGGAAAGGAGGGAGTACTA 58.629 38.462 0.00 0.00 0.00 1.82
4530 5284 6.997942 ATTATGGAAAGGAGGGAGTACTAC 57.002 41.667 0.00 0.00 0.00 2.73
4531 5285 4.628661 ATGGAAAGGAGGGAGTACTACT 57.371 45.455 4.77 1.85 31.32 2.57
4532 5286 4.415224 TGGAAAGGAGGGAGTACTACTT 57.585 45.455 4.77 0.00 43.44 2.24
4538 5292 6.854091 AAGGAGGGAGTACTACTTTTAGTG 57.146 41.667 4.77 0.00 38.49 2.74
4539 5293 6.150034 AGGAGGGAGTACTACTTTTAGTGA 57.850 41.667 4.77 0.00 39.06 3.41
4540 5294 6.559429 AGGAGGGAGTACTACTTTTAGTGAA 58.441 40.000 4.77 0.00 39.06 3.18
4541 5295 7.015064 AGGAGGGAGTACTACTTTTAGTGAAA 58.985 38.462 4.77 0.00 39.06 2.69
4542 5296 7.679025 AGGAGGGAGTACTACTTTTAGTGAAAT 59.321 37.037 4.77 0.00 39.06 2.17
4543 5297 8.319881 GGAGGGAGTACTACTTTTAGTGAAATT 58.680 37.037 4.77 0.00 39.06 1.82
4570 5324 9.921637 AGATAATAAATTGCCGTTTTTCAAGAA 57.078 25.926 0.00 0.00 0.00 2.52
4621 5375 9.247861 ACTAGAATTGGCAAAGATTCTGTTAAT 57.752 29.630 19.70 1.28 41.40 1.40
4626 5380 5.713025 TGGCAAAGATTCTGTTAATGAAGC 58.287 37.500 0.00 2.52 0.00 3.86
4675 5430 1.089920 GTCCCACAGCACATGACATC 58.910 55.000 0.00 0.00 0.00 3.06
4686 5441 0.723414 CATGACATCGTGCAGTGGAC 59.277 55.000 4.41 4.41 0.00 4.02
4687 5442 0.610174 ATGACATCGTGCAGTGGACT 59.390 50.000 13.27 0.00 0.00 3.85
4688 5443 0.038251 TGACATCGTGCAGTGGACTC 60.038 55.000 13.27 4.13 0.00 3.36
4689 5444 0.244994 GACATCGTGCAGTGGACTCT 59.755 55.000 13.27 0.00 0.00 3.24
4690 5445 1.472878 GACATCGTGCAGTGGACTCTA 59.527 52.381 13.27 0.00 0.00 2.43
4691 5446 1.202582 ACATCGTGCAGTGGACTCTAC 59.797 52.381 13.27 0.00 0.00 2.59
4692 5447 1.474478 CATCGTGCAGTGGACTCTACT 59.526 52.381 13.27 0.00 0.00 2.57
4694 5449 1.269723 TCGTGCAGTGGACTCTACTTG 59.730 52.381 13.27 0.00 0.00 3.16
4695 5450 1.670087 CGTGCAGTGGACTCTACTTGG 60.670 57.143 13.27 0.00 0.00 3.61
4729 5505 2.068915 TGCCTCTGCAGATTGTCCA 58.931 52.632 18.63 7.29 44.23 4.02
4746 5522 1.344438 TCCACTGTGCTGTGTTCTAGG 59.656 52.381 1.29 0.00 36.30 3.02
4754 5530 6.780031 ACTGTGCTGTGTTCTAGGAGATATAT 59.220 38.462 0.00 0.00 0.00 0.86
4755 5531 7.288852 ACTGTGCTGTGTTCTAGGAGATATATT 59.711 37.037 0.00 0.00 0.00 1.28
4756 5532 8.023021 TGTGCTGTGTTCTAGGAGATATATTT 57.977 34.615 0.00 0.00 0.00 1.40
4757 5533 8.144478 TGTGCTGTGTTCTAGGAGATATATTTC 58.856 37.037 0.00 0.00 0.00 2.17
4758 5534 8.364142 GTGCTGTGTTCTAGGAGATATATTTCT 58.636 37.037 3.49 0.00 0.00 2.52
4759 5535 8.928448 TGCTGTGTTCTAGGAGATATATTTCTT 58.072 33.333 3.49 0.00 0.00 2.52
4760 5536 9.202273 GCTGTGTTCTAGGAGATATATTTCTTG 57.798 37.037 3.49 0.00 0.00 3.02
4842 5647 6.494059 ACCAGGACAGCCTAATTCTTATTTT 58.506 36.000 0.00 0.00 44.80 1.82
4848 5653 8.739972 GGACAGCCTAATTCTTATTTTTCTTGA 58.260 33.333 0.00 0.00 0.00 3.02
4974 5784 0.036732 GCCAGACAATGAGGGTGACA 59.963 55.000 0.00 0.00 0.00 3.58
5090 5909 4.065281 GCCGACACCTACAGCGGT 62.065 66.667 0.00 0.00 45.22 5.68
5131 5957 4.961099 AGAAGTGATGATCATCTGGAGACA 59.039 41.667 30.65 11.37 38.60 3.41
5279 6113 2.365293 TCATGTACTGGCGCATGATACT 59.635 45.455 10.83 0.00 44.29 2.12
5280 6114 3.572255 TCATGTACTGGCGCATGATACTA 59.428 43.478 10.83 0.00 44.29 1.82
5281 6115 3.643159 TGTACTGGCGCATGATACTAG 57.357 47.619 10.83 0.00 0.00 2.57
5365 6221 3.454447 TCTCACAAAACAAGACCTGGAGA 59.546 43.478 0.00 0.00 0.00 3.71
5480 7297 2.724690 GCGGCTGTCTGTAATACATACG 59.275 50.000 4.80 1.95 37.32 3.06
5493 7310 5.565592 AATACATACGGACACACGTTAGA 57.434 39.130 0.00 0.00 46.25 2.10
5503 7337 0.608130 ACACGTTAGAGAGCATGCCA 59.392 50.000 15.66 0.00 0.00 4.92
5550 10711 6.265196 TGTTCCAGATTACACTGATTGCTTTT 59.735 34.615 0.00 0.00 39.94 2.27
5577 10738 2.165234 GCTGCTCATTTTTCTCCTTCCC 59.835 50.000 0.00 0.00 0.00 3.97
5607 10770 3.643792 CCAATTGGGTCTTGGTGGTTTTA 59.356 43.478 17.36 0.00 38.67 1.52
5634 10797 2.498726 GCCTCTCTTGCCCTCTCG 59.501 66.667 0.00 0.00 0.00 4.04
5648 10811 1.739338 CTCTCGGAGGATTCGGTGGG 61.739 65.000 4.96 0.00 37.98 4.61
5654 10823 3.728373 GGATTCGGTGGGTGGCCT 61.728 66.667 3.32 0.00 0.00 5.19
5712 10881 1.233019 CTCTTGTGTGGCCTCAAGTG 58.767 55.000 23.98 20.32 41.04 3.16
5749 10918 4.038271 TCAATGATTTGAAGGGCAGAGT 57.962 40.909 0.00 0.00 38.90 3.24
5750 10919 5.178096 TCAATGATTTGAAGGGCAGAGTA 57.822 39.130 0.00 0.00 38.90 2.59
5751 10920 4.943705 TCAATGATTTGAAGGGCAGAGTAC 59.056 41.667 0.00 0.00 38.90 2.73
5752 10921 4.851639 ATGATTTGAAGGGCAGAGTACT 57.148 40.909 0.00 0.00 0.00 2.73
5885 11059 1.608025 GCCTGTTCCTTGTCATCGACA 60.608 52.381 0.00 0.00 41.09 4.35
5887 11061 2.341257 CTGTTCCTTGTCATCGACAGG 58.659 52.381 0.00 0.00 43.69 4.00
6033 11207 3.164977 TGGACGGCCAACCTCACA 61.165 61.111 8.12 0.00 42.49 3.58
6058 11232 1.923006 GCCCTTGGACTTCCTACCCC 61.923 65.000 0.00 0.00 36.82 4.95
6072 11246 4.641645 CCCCGTGTTGCTGCTCCA 62.642 66.667 0.00 0.00 0.00 3.86
6075 11249 1.597854 CCGTGTTGCTGCTCCAGAA 60.598 57.895 0.00 0.00 32.44 3.02
6081 11255 1.683385 GTTGCTGCTCCAGAAAAAGGT 59.317 47.619 0.00 0.00 29.91 3.50
6082 11256 1.609208 TGCTGCTCCAGAAAAAGGTC 58.391 50.000 0.00 0.00 32.44 3.85
6094 11268 0.953960 AAAAGGTCGGCCGTGATCAC 60.954 55.000 27.15 16.21 40.50 3.06
6106 11280 2.483876 CGTGATCACCGCCTCAAATAT 58.516 47.619 20.03 0.00 0.00 1.28
6109 11283 3.248602 GTGATCACCGCCTCAAATATGAC 59.751 47.826 15.31 0.00 0.00 3.06
6115 11289 2.205074 CGCCTCAAATATGACGAGCTT 58.795 47.619 0.00 0.00 29.27 3.74
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 2.301577 CTCAATGGGAGGAGACGTTC 57.698 55.000 0.00 0.00 40.13 3.95
42 43 8.295288 TCCTAGTCGTATTTTCCTCGATTTATC 58.705 37.037 0.00 0.00 36.08 1.75
59 60 2.957006 ACAGTGTTCAAGTCCTAGTCGT 59.043 45.455 0.00 0.00 0.00 4.34
76 89 1.222567 GGTATCCCCATCCCAACAGT 58.777 55.000 0.00 0.00 0.00 3.55
122 135 2.181125 TGGGCCTATCACGAACTAACA 58.819 47.619 4.53 0.00 0.00 2.41
123 136 2.934553 GTTGGGCCTATCACGAACTAAC 59.065 50.000 4.53 0.00 0.00 2.34
126 139 1.276622 AGTTGGGCCTATCACGAACT 58.723 50.000 4.53 0.56 32.00 3.01
223 237 1.141858 CTCCTATCTTTGGGTGAGGGC 59.858 57.143 0.00 0.00 0.00 5.19
305 324 9.290988 TGAAACAGAACCTAAAATAGCATAACA 57.709 29.630 0.00 0.00 0.00 2.41
314 333 9.023962 TGCATCTAATGAAACAGAACCTAAAAT 57.976 29.630 0.00 0.00 0.00 1.82
347 366 1.619332 GGAGTGGAAGAGGACTTTCGT 59.381 52.381 0.00 0.00 36.39 3.85
362 382 3.902881 AGCTAAATGAGGTCAGGAGTG 57.097 47.619 0.00 0.00 0.00 3.51
371 391 4.693283 TGTTCATACCGAGCTAAATGAGG 58.307 43.478 0.00 0.00 30.53 3.86
372 392 6.851222 ATTGTTCATACCGAGCTAAATGAG 57.149 37.500 0.00 0.00 30.53 2.90
445 480 6.258230 TCTAGTGATGAAATTTGGCAAGTG 57.742 37.500 0.00 0.00 0.00 3.16
547 599 8.236586 CGAAAGAATATTTGTGGAAGTCATGAA 58.763 33.333 0.00 0.00 0.00 2.57
548 600 7.390440 ACGAAAGAATATTTGTGGAAGTCATGA 59.610 33.333 0.00 0.00 0.00 3.07
551 603 8.610248 TTACGAAAGAATATTTGTGGAAGTCA 57.390 30.769 0.00 0.00 0.00 3.41
565 617 7.148590 GCTTGCCAAATTTCATTACGAAAGAAT 60.149 33.333 0.00 0.00 46.57 2.40
573 625 5.921004 TTGTGCTTGCCAAATTTCATTAC 57.079 34.783 0.00 0.00 0.00 1.89
574 626 6.238593 GGTTTTGTGCTTGCCAAATTTCATTA 60.239 34.615 9.01 0.00 32.28 1.90
628 680 7.411157 CGGAGCTCAAATGCTTTAAAAATTCTG 60.411 37.037 17.19 0.00 44.17 3.02
629 681 6.587608 CGGAGCTCAAATGCTTTAAAAATTCT 59.412 34.615 17.19 0.00 44.17 2.40
630 682 6.183360 CCGGAGCTCAAATGCTTTAAAAATTC 60.183 38.462 17.19 0.00 44.17 2.17
631 683 5.639082 CCGGAGCTCAAATGCTTTAAAAATT 59.361 36.000 17.19 0.00 44.17 1.82
637 692 2.236146 TCTCCGGAGCTCAAATGCTTTA 59.764 45.455 27.39 1.07 44.17 1.85
641 696 2.139118 GTATCTCCGGAGCTCAAATGC 58.861 52.381 27.39 13.96 0.00 3.56
665 720 7.293535 AGAGGGATTAGTATAATGCCTTGAAGT 59.706 37.037 19.61 1.66 46.56 3.01
684 740 7.070074 ACGTCTTACATTTTGATAGAGAGGGAT 59.930 37.037 0.00 0.00 0.00 3.85
780 844 9.000978 TCTCTCTAGAGGAAAATACTACTACCA 57.999 37.037 19.67 0.00 42.30 3.25
795 859 8.873490 CTGACCCATCATTTCTCTCTCTAGAGG 61.873 48.148 19.67 10.47 41.03 3.69
796 860 6.016024 CTGACCCATCATTTCTCTCTCTAGAG 60.016 46.154 13.98 13.98 41.55 2.43
800 864 4.618635 TCTGACCCATCATTTCTCTCTCT 58.381 43.478 0.00 0.00 33.22 3.10
805 869 3.950395 CCCTTTCTGACCCATCATTTCTC 59.050 47.826 0.00 0.00 33.22 2.87
873 938 6.591448 CCTTTGTTTCTTATGATTTTCCCTGC 59.409 38.462 0.00 0.00 0.00 4.85
876 941 5.874810 GCCCTTTGTTTCTTATGATTTTCCC 59.125 40.000 0.00 0.00 0.00 3.97
913 978 0.685097 TAGTTCCACTGCACCCACTC 59.315 55.000 0.00 0.00 0.00 3.51
937 1002 2.888863 GGACAGAGAGACCCTGCG 59.111 66.667 0.00 0.00 35.14 5.18
951 1016 1.004891 AGGAATGGGGGAGAGGGAC 59.995 63.158 0.00 0.00 0.00 4.46
1309 1385 3.203086 TTGGGCGCATCTGGGTTCA 62.203 57.895 10.83 0.00 0.00 3.18
1370 1446 2.094494 ACAGATTCCACGTACTGCAGAG 60.094 50.000 23.35 13.56 34.25 3.35
1373 1449 2.823747 ACTACAGATTCCACGTACTGCA 59.176 45.455 0.00 0.00 34.25 4.41
1374 1450 3.505464 ACTACAGATTCCACGTACTGC 57.495 47.619 0.00 0.00 34.25 4.40
1376 1452 4.261072 CGCATACTACAGATTCCACGTACT 60.261 45.833 0.00 0.00 0.00 2.73
1377 1453 3.973135 CGCATACTACAGATTCCACGTAC 59.027 47.826 0.00 0.00 0.00 3.67
1378 1454 3.628942 ACGCATACTACAGATTCCACGTA 59.371 43.478 0.00 0.00 0.00 3.57
1379 1455 2.426024 ACGCATACTACAGATTCCACGT 59.574 45.455 0.00 0.00 0.00 4.49
1380 1456 2.789339 CACGCATACTACAGATTCCACG 59.211 50.000 0.00 0.00 0.00 4.94
1381 1457 2.540101 GCACGCATACTACAGATTCCAC 59.460 50.000 0.00 0.00 0.00 4.02
1382 1458 2.430694 AGCACGCATACTACAGATTCCA 59.569 45.455 0.00 0.00 0.00 3.53
1383 1459 3.053455 GAGCACGCATACTACAGATTCC 58.947 50.000 0.00 0.00 0.00 3.01
1384 1460 3.053455 GGAGCACGCATACTACAGATTC 58.947 50.000 0.00 0.00 0.00 2.52
1385 1461 2.695666 AGGAGCACGCATACTACAGATT 59.304 45.455 0.00 0.00 0.00 2.40
1386 1462 2.035193 CAGGAGCACGCATACTACAGAT 59.965 50.000 0.00 0.00 0.00 2.90
1405 1505 3.570926 ACAAATCAACATCAGCAGCAG 57.429 42.857 0.00 0.00 0.00 4.24
1433 1533 9.455847 CTTGGAAAACAACAAAATTTGACAAAA 57.544 25.926 13.19 0.00 34.76 2.44
1495 1603 2.999355 GCAACAACAAGAGCACCAAAAA 59.001 40.909 0.00 0.00 0.00 1.94
1501 1609 0.595825 GGCTGCAACAACAAGAGCAC 60.596 55.000 0.50 0.00 32.87 4.40
1581 1692 4.642488 TGTACCAGGGTCCCCGCA 62.642 66.667 3.51 0.00 41.95 5.69
1588 1699 3.391382 GAGGCGCTGTACCAGGGT 61.391 66.667 7.64 0.00 44.58 4.34
1603 1714 2.885644 CGGTTCACGGCGATGGAG 60.886 66.667 16.62 0.00 39.42 3.86
1666 1777 1.446272 CTTGAGAAGACCGTCGCCC 60.446 63.158 0.00 0.00 0.00 6.13
1675 1786 1.416401 ACGGCCTTGAACTTGAGAAGA 59.584 47.619 0.00 0.00 0.00 2.87
1693 1804 0.320421 ACACACCTCCCAATCGAACG 60.320 55.000 0.00 0.00 0.00 3.95
1699 1810 0.838987 ACCGGTACACACCTCCCAAT 60.839 55.000 4.49 0.00 43.33 3.16
1713 1824 1.375551 GTGTGAAGTTGTCAACCGGT 58.624 50.000 12.17 0.00 38.23 5.28
1728 1839 2.746904 TCAGACACAAAACAGTGGTGTG 59.253 45.455 17.45 17.45 45.09 3.82
1732 1843 5.247507 TGAAATCAGACACAAAACAGTGG 57.752 39.130 0.00 0.00 43.72 4.00
1736 1847 8.219546 TCAGTTATGAAATCAGACACAAAACA 57.780 30.769 3.53 0.00 30.61 2.83
1737 1848 8.958043 GTTCAGTTATGAAATCAGACACAAAAC 58.042 33.333 0.00 0.00 46.75 2.43
1748 1859 6.775088 TCATGCTTCGTTCAGTTATGAAATC 58.225 36.000 0.00 0.00 46.75 2.17
1758 1869 8.451687 TTTTATTTGAATCATGCTTCGTTCAG 57.548 30.769 4.92 0.00 32.76 3.02
1783 1894 7.645058 ACAATTGCTATAGCCTTGTTAACAT 57.355 32.000 25.58 11.07 40.58 2.71
1784 1895 7.312154 CAACAATTGCTATAGCCTTGTTAACA 58.688 34.615 32.96 3.59 45.55 2.41
1785 1896 7.740519 CAACAATTGCTATAGCCTTGTTAAC 57.259 36.000 32.96 0.00 45.55 2.01
1861 1982 6.096141 TCAACTTTTCTTTGAGCCATGTAACA 59.904 34.615 0.00 0.00 0.00 2.41
1871 1992 5.192327 AGCATGGTCAACTTTTCTTTGAG 57.808 39.130 0.00 0.00 33.63 3.02
1916 2037 0.449388 GTTGCATAGTGAGCACCAGC 59.551 55.000 0.00 0.34 42.54 4.85
1969 2090 8.286097 GGTAGAAGTTGAGTTTCATTCTTTCTG 58.714 37.037 1.59 0.00 30.80 3.02
2124 2245 4.449743 GCGGTTGTATTTCGCTCCAATATA 59.550 41.667 0.00 0.00 45.16 0.86
2135 2259 1.727857 CGTTGGCTGCGGTTGTATTTC 60.728 52.381 0.00 0.00 0.00 2.17
2236 2360 6.931281 GCTATTTCATTCTACAGCCTACATCA 59.069 38.462 0.00 0.00 0.00 3.07
2295 2419 8.780003 AGAAGACCACTAAAGAGACTAGGTATA 58.220 37.037 0.00 0.00 0.00 1.47
2309 2433 4.755411 CCGCTCATTAAGAAGACCACTAA 58.245 43.478 0.00 0.00 0.00 2.24
2386 2510 6.431234 AGTTGTCATACAAGTTTCCATTCCTC 59.569 38.462 0.00 0.00 38.52 3.71
2565 2690 1.298041 ACGTTTCTTGCGCAAACCG 60.298 52.632 25.01 22.69 40.75 4.44
2753 3045 6.903883 AACAGAACTACTTATATGGCAACG 57.096 37.500 0.00 0.00 42.51 4.10
2802 3104 0.387622 CCGAGCATTGTTGTTGCCTG 60.388 55.000 0.00 0.00 41.06 4.85
2817 3119 6.851222 ATAGCAATAAACATTCTGTCCGAG 57.149 37.500 0.00 0.00 0.00 4.63
2840 3142 5.480073 ACCAAAGCAAAGATTAGGCACATTA 59.520 36.000 0.00 0.00 0.00 1.90
2846 3148 7.078228 CGATAATACCAAAGCAAAGATTAGGC 58.922 38.462 0.00 0.00 0.00 3.93
2850 3483 6.183360 CCACCGATAATACCAAAGCAAAGATT 60.183 38.462 0.00 0.00 0.00 2.40
2862 3495 3.801307 AAATCCCCCACCGATAATACC 57.199 47.619 0.00 0.00 0.00 2.73
2909 3560 7.666623 TCCCAAATTTTCATGTCTAACTTTCC 58.333 34.615 0.00 0.00 0.00 3.13
3048 3705 5.398416 GCGATTTGGTTGAGTTTGAACTAAC 59.602 40.000 0.00 2.98 39.88 2.34
3241 3898 5.662657 TCAAGTCATATCACCCTGATCTGAA 59.337 40.000 0.38 0.00 40.24 3.02
3343 4009 4.886579 AGCAGGCAAATTTAACAAGAAGG 58.113 39.130 0.00 0.00 0.00 3.46
3344 4010 9.241317 CATATAGCAGGCAAATTTAACAAGAAG 57.759 33.333 0.00 0.00 0.00 2.85
3379 4045 1.477553 CATAACAGGGCACAATGGCT 58.522 50.000 2.17 0.00 43.20 4.75
3478 4144 8.408043 TTCAGAAATGGAATACAACATGAACT 57.592 30.769 0.00 0.00 0.00 3.01
3521 4190 6.598850 GGGGTAATTGAGGAAACATTACGTTA 59.401 38.462 0.00 0.00 36.59 3.18
3525 4194 5.847111 GGGGGTAATTGAGGAAACATTAC 57.153 43.478 0.00 0.00 0.00 1.89
3553 4222 4.691216 GCTTTGGAGTTGTAACTAGACCTG 59.309 45.833 0.00 0.00 39.88 4.00
3561 4230 7.200455 ACACAAATAAGCTTTGGAGTTGTAAC 58.800 34.615 11.86 0.00 33.92 2.50
3563 4232 6.952773 ACACAAATAAGCTTTGGAGTTGTA 57.047 33.333 11.86 0.00 33.92 2.41
3564 4233 5.852282 ACACAAATAAGCTTTGGAGTTGT 57.148 34.783 3.20 5.96 33.92 3.32
3565 4234 7.202016 TCTACACAAATAAGCTTTGGAGTTG 57.798 36.000 3.20 5.24 33.92 3.16
3566 4235 6.431234 CCTCTACACAAATAAGCTTTGGAGTT 59.569 38.462 3.20 0.00 33.92 3.01
3579 4248 8.548877 ACATAGTTGGTATTCCTCTACACAAAT 58.451 33.333 0.00 0.00 34.23 2.32
3582 4251 8.598202 TTACATAGTTGGTATTCCTCTACACA 57.402 34.615 0.00 0.00 34.23 3.72
3606 4275 3.775316 CAACCCCATCCACTCTACTACTT 59.225 47.826 0.00 0.00 0.00 2.24
3647 4352 6.604735 ATCAGTGTAAGAACTTGTTCACAC 57.395 37.500 20.13 20.13 37.21 3.82
3659 4385 4.841813 TGGGGTTCAACTATCAGTGTAAGA 59.158 41.667 0.00 0.00 0.00 2.10
3660 4386 5.160607 TGGGGTTCAACTATCAGTGTAAG 57.839 43.478 0.00 0.00 0.00 2.34
3667 4393 4.047166 AGATCCATGGGGTTCAACTATCA 58.953 43.478 13.02 0.00 35.67 2.15
3669 4395 5.472301 AAAGATCCATGGGGTTCAACTAT 57.528 39.130 13.02 0.00 35.67 2.12
3671 4397 3.833559 AAAGATCCATGGGGTTCAACT 57.166 42.857 13.02 0.00 35.67 3.16
3695 4421 4.767578 ATGTAGCACTGTCTTGGATGAT 57.232 40.909 0.00 0.00 0.00 2.45
3697 4423 5.664457 TCTTATGTAGCACTGTCTTGGATG 58.336 41.667 0.00 0.00 0.00 3.51
3698 4424 5.939764 TCTTATGTAGCACTGTCTTGGAT 57.060 39.130 0.00 0.00 0.00 3.41
3699 4425 5.246203 AGTTCTTATGTAGCACTGTCTTGGA 59.754 40.000 0.00 0.00 28.65 3.53
3701 4427 6.393990 AGAGTTCTTATGTAGCACTGTCTTG 58.606 40.000 0.00 0.00 30.03 3.02
3702 4428 6.597832 AGAGTTCTTATGTAGCACTGTCTT 57.402 37.500 0.00 0.00 30.03 3.01
3703 4429 6.597832 AAGAGTTCTTATGTAGCACTGTCT 57.402 37.500 0.00 0.00 30.03 3.41
3740 4469 6.586344 TCCAAAGCATGTTTCATACCAAAAA 58.414 32.000 0.00 0.00 0.00 1.94
3741 4470 6.166984 TCCAAAGCATGTTTCATACCAAAA 57.833 33.333 0.00 0.00 0.00 2.44
3745 4474 5.964758 TCAATCCAAAGCATGTTTCATACC 58.035 37.500 0.00 0.00 0.00 2.73
3764 4493 8.157476 ACCTTTGCTCTATATAACGGAATCAAT 58.843 33.333 0.00 0.00 0.00 2.57
3765 4494 7.506114 ACCTTTGCTCTATATAACGGAATCAA 58.494 34.615 0.00 0.00 0.00 2.57
3790 4519 3.831637 AACCCCAGCCCACTGCAA 61.832 61.111 0.00 0.00 43.02 4.08
3804 4533 1.880027 CCTGGTACTTTGAGCACAACC 59.120 52.381 0.00 0.00 35.63 3.77
3805 4534 2.572290 ACCTGGTACTTTGAGCACAAC 58.428 47.619 0.00 0.00 35.63 3.32
3833 4574 4.818546 CCACAACAATCTAGCCCATCTAAG 59.181 45.833 0.00 0.00 0.00 2.18
3852 4593 1.985159 ACCAGCCTGTTAGATTCCACA 59.015 47.619 0.00 0.00 0.00 4.17
3863 4604 1.630369 TGCATCTAAGAACCAGCCTGT 59.370 47.619 0.00 0.00 0.00 4.00
3868 4609 8.437360 TGTACAAATATGCATCTAAGAACCAG 57.563 34.615 0.19 0.00 0.00 4.00
3870 4611 9.722056 CTTTGTACAAATATGCATCTAAGAACC 57.278 33.333 20.83 0.00 0.00 3.62
3872 4613 8.902806 CCCTTTGTACAAATATGCATCTAAGAA 58.097 33.333 20.83 0.00 0.00 2.52
3921 4662 6.316390 CGATGTCTAGAAATAGGCCAGTTTTT 59.684 38.462 5.01 3.25 0.00 1.94
3923 4664 5.104900 ACGATGTCTAGAAATAGGCCAGTTT 60.105 40.000 5.01 5.12 0.00 2.66
3926 4667 4.592485 ACGATGTCTAGAAATAGGCCAG 57.408 45.455 5.01 0.00 0.00 4.85
3936 4677 4.830826 ATATGCACGAACGATGTCTAGA 57.169 40.909 0.14 0.00 0.00 2.43
3938 4679 6.500910 ACTAAATATGCACGAACGATGTCTA 58.499 36.000 0.14 0.00 0.00 2.59
3939 4680 5.348986 ACTAAATATGCACGAACGATGTCT 58.651 37.500 0.14 0.00 0.00 3.41
3944 4685 8.325282 CAGAATAAACTAAATATGCACGAACGA 58.675 33.333 0.14 0.00 0.00 3.85
3945 4686 8.114290 ACAGAATAAACTAAATATGCACGAACG 58.886 33.333 0.00 0.00 0.00 3.95
3946 4687 9.210426 CACAGAATAAACTAAATATGCACGAAC 57.790 33.333 0.00 0.00 0.00 3.95
3950 4691 9.013490 CAAGCACAGAATAAACTAAATATGCAC 57.987 33.333 0.00 0.00 0.00 4.57
4004 4749 7.658261 ACTCAAAGTCAATTAAAGCCCTTAAC 58.342 34.615 0.00 0.00 32.26 2.01
4023 4768 9.594478 TTGTCATCTTAATAGCGATAACTCAAA 57.406 29.630 0.00 0.00 0.00 2.69
4026 4771 9.250624 AGTTTGTCATCTTAATAGCGATAACTC 57.749 33.333 0.00 0.00 0.00 3.01
4031 4776 6.483640 GGGAAGTTTGTCATCTTAATAGCGAT 59.516 38.462 0.00 0.00 0.00 4.58
4037 4782 6.151817 GCTTCTGGGAAGTTTGTCATCTTAAT 59.848 38.462 8.73 0.00 0.00 1.40
4039 4784 5.003804 GCTTCTGGGAAGTTTGTCATCTTA 58.996 41.667 8.73 0.00 0.00 2.10
4041 4786 3.181440 TGCTTCTGGGAAGTTTGTCATCT 60.181 43.478 8.73 0.00 0.00 2.90
4042 4787 3.149196 TGCTTCTGGGAAGTTTGTCATC 58.851 45.455 8.73 0.00 0.00 2.92
4049 4794 4.043435 AGGTTATTCTGCTTCTGGGAAGTT 59.957 41.667 8.73 0.00 0.00 2.66
4050 4795 3.589288 AGGTTATTCTGCTTCTGGGAAGT 59.411 43.478 8.73 0.00 0.00 3.01
4052 4797 4.657814 AAGGTTATTCTGCTTCTGGGAA 57.342 40.909 0.00 0.00 0.00 3.97
4053 4798 4.657814 AAAGGTTATTCTGCTTCTGGGA 57.342 40.909 0.00 0.00 0.00 4.37
4054 4799 5.728637 AAAAAGGTTATTCTGCTTCTGGG 57.271 39.130 0.00 0.00 0.00 4.45
4055 4800 9.358872 GAAATAAAAAGGTTATTCTGCTTCTGG 57.641 33.333 0.00 0.00 0.00 3.86
4056 4801 9.912634 TGAAATAAAAAGGTTATTCTGCTTCTG 57.087 29.630 0.00 0.00 0.00 3.02
4092 4837 8.017587 ACAAGAAAACAAAACAAACTAGCAAG 57.982 30.769 0.00 0.00 0.00 4.01
4094 4839 7.954788 AACAAGAAAACAAAACAAACTAGCA 57.045 28.000 0.00 0.00 0.00 3.49
4101 4849 8.338986 GTGGAAAGAAACAAGAAAACAAAACAA 58.661 29.630 0.00 0.00 0.00 2.83
4105 4853 8.361139 TGTAGTGGAAAGAAACAAGAAAACAAA 58.639 29.630 0.00 0.00 0.00 2.83
4107 4855 7.392113 TCTGTAGTGGAAAGAAACAAGAAAACA 59.608 33.333 0.00 0.00 0.00 2.83
4132 4883 2.364324 TCCAACATAGATGTACCCGCTC 59.636 50.000 0.00 0.00 40.80 5.03
4135 4886 5.018539 TCTTTCCAACATAGATGTACCCG 57.981 43.478 0.00 0.00 40.80 5.28
4141 4892 5.009410 GCCCTTCATCTTTCCAACATAGATG 59.991 44.000 0.00 0.00 44.15 2.90
4162 4913 8.283699 TGTACCTAAAATTAAATAGTGTGCCC 57.716 34.615 0.00 0.00 0.00 5.36
4225 4979 8.780846 ATCTACAACGGTATGTTAATGTCAAA 57.219 30.769 0.00 0.00 39.29 2.69
4226 4980 8.780846 AATCTACAACGGTATGTTAATGTCAA 57.219 30.769 0.00 0.00 39.29 3.18
4227 4981 9.872721 TTAATCTACAACGGTATGTTAATGTCA 57.127 29.630 0.00 0.00 39.29 3.58
4235 4989 9.221933 TGAAAACATTAATCTACAACGGTATGT 57.778 29.630 0.00 0.00 37.32 2.29
4236 4990 9.702726 CTGAAAACATTAATCTACAACGGTATG 57.297 33.333 0.00 0.00 0.00 2.39
4237 4991 9.661563 TCTGAAAACATTAATCTACAACGGTAT 57.338 29.630 0.00 0.00 0.00 2.73
4238 4992 9.661563 ATCTGAAAACATTAATCTACAACGGTA 57.338 29.630 0.00 0.00 0.00 4.02
4239 4993 7.972832 TCTGAAAACATTAATCTACAACGGT 57.027 32.000 0.00 0.00 0.00 4.83
4241 4995 9.638300 GCTATCTGAAAACATTAATCTACAACG 57.362 33.333 0.00 0.00 0.00 4.10
4295 5049 8.199449 CCATTTTGCAATTATCTTAGACATGGT 58.801 33.333 0.00 0.00 0.00 3.55
4296 5050 7.654520 CCCATTTTGCAATTATCTTAGACATGG 59.345 37.037 0.00 0.00 0.00 3.66
4297 5051 8.199449 ACCCATTTTGCAATTATCTTAGACATG 58.801 33.333 0.00 0.00 0.00 3.21
4298 5052 8.199449 CACCCATTTTGCAATTATCTTAGACAT 58.801 33.333 0.00 0.00 0.00 3.06
4299 5053 7.395772 TCACCCATTTTGCAATTATCTTAGACA 59.604 33.333 0.00 0.00 0.00 3.41
4300 5054 7.771183 TCACCCATTTTGCAATTATCTTAGAC 58.229 34.615 0.00 0.00 0.00 2.59
4301 5055 7.953005 TCACCCATTTTGCAATTATCTTAGA 57.047 32.000 0.00 0.00 0.00 2.10
4304 5058 9.603921 CTTATTCACCCATTTTGCAATTATCTT 57.396 29.630 0.00 0.00 0.00 2.40
4305 5059 7.712205 GCTTATTCACCCATTTTGCAATTATCT 59.288 33.333 0.00 0.00 0.00 1.98
4306 5060 7.712205 AGCTTATTCACCCATTTTGCAATTATC 59.288 33.333 0.00 0.00 0.00 1.75
4307 5061 7.567458 AGCTTATTCACCCATTTTGCAATTAT 58.433 30.769 0.00 0.00 0.00 1.28
4308 5062 6.945218 AGCTTATTCACCCATTTTGCAATTA 58.055 32.000 0.00 0.00 0.00 1.40
4309 5063 5.807909 AGCTTATTCACCCATTTTGCAATT 58.192 33.333 0.00 0.00 0.00 2.32
4310 5064 5.425196 AGCTTATTCACCCATTTTGCAAT 57.575 34.783 0.00 0.00 0.00 3.56
4311 5065 4.888326 AGCTTATTCACCCATTTTGCAA 57.112 36.364 0.00 0.00 0.00 4.08
4312 5066 5.105392 CCTTAGCTTATTCACCCATTTTGCA 60.105 40.000 0.00 0.00 0.00 4.08
4313 5067 5.105351 ACCTTAGCTTATTCACCCATTTTGC 60.105 40.000 0.00 0.00 0.00 3.68
4314 5068 6.530019 ACCTTAGCTTATTCACCCATTTTG 57.470 37.500 0.00 0.00 0.00 2.44
4315 5069 8.658840 TTTACCTTAGCTTATTCACCCATTTT 57.341 30.769 0.00 0.00 0.00 1.82
4316 5070 8.113462 TCTTTACCTTAGCTTATTCACCCATTT 58.887 33.333 0.00 0.00 0.00 2.32
4317 5071 7.639378 TCTTTACCTTAGCTTATTCACCCATT 58.361 34.615 0.00 0.00 0.00 3.16
4318 5072 7.208064 TCTTTACCTTAGCTTATTCACCCAT 57.792 36.000 0.00 0.00 0.00 4.00
4319 5073 6.630203 TCTTTACCTTAGCTTATTCACCCA 57.370 37.500 0.00 0.00 0.00 4.51
4320 5074 7.013369 CCAATCTTTACCTTAGCTTATTCACCC 59.987 40.741 0.00 0.00 0.00 4.61
4321 5075 7.556635 ACCAATCTTTACCTTAGCTTATTCACC 59.443 37.037 0.00 0.00 0.00 4.02
4322 5076 8.507524 ACCAATCTTTACCTTAGCTTATTCAC 57.492 34.615 0.00 0.00 0.00 3.18
4323 5077 8.956426 CAACCAATCTTTACCTTAGCTTATTCA 58.044 33.333 0.00 0.00 0.00 2.57
4324 5078 8.406297 CCAACCAATCTTTACCTTAGCTTATTC 58.594 37.037 0.00 0.00 0.00 1.75
4325 5079 7.893833 ACCAACCAATCTTTACCTTAGCTTATT 59.106 33.333 0.00 0.00 0.00 1.40
4326 5080 7.410991 ACCAACCAATCTTTACCTTAGCTTAT 58.589 34.615 0.00 0.00 0.00 1.73
4327 5081 6.786122 ACCAACCAATCTTTACCTTAGCTTA 58.214 36.000 0.00 0.00 0.00 3.09
4328 5082 5.641155 ACCAACCAATCTTTACCTTAGCTT 58.359 37.500 0.00 0.00 0.00 3.74
4329 5083 5.256806 ACCAACCAATCTTTACCTTAGCT 57.743 39.130 0.00 0.00 0.00 3.32
4330 5084 5.977489 AACCAACCAATCTTTACCTTAGC 57.023 39.130 0.00 0.00 0.00 3.09
4331 5085 7.651704 CACAAAACCAACCAATCTTTACCTTAG 59.348 37.037 0.00 0.00 0.00 2.18
4332 5086 7.493367 CACAAAACCAACCAATCTTTACCTTA 58.507 34.615 0.00 0.00 0.00 2.69
4333 5087 6.345298 CACAAAACCAACCAATCTTTACCTT 58.655 36.000 0.00 0.00 0.00 3.50
4334 5088 5.683770 GCACAAAACCAACCAATCTTTACCT 60.684 40.000 0.00 0.00 0.00 3.08
4335 5089 4.509970 GCACAAAACCAACCAATCTTTACC 59.490 41.667 0.00 0.00 0.00 2.85
4336 5090 5.356426 AGCACAAAACCAACCAATCTTTAC 58.644 37.500 0.00 0.00 0.00 2.01
4337 5091 5.606348 AGCACAAAACCAACCAATCTTTA 57.394 34.783 0.00 0.00 0.00 1.85
4338 5092 4.486125 AGCACAAAACCAACCAATCTTT 57.514 36.364 0.00 0.00 0.00 2.52
4339 5093 4.190772 CAAGCACAAAACCAACCAATCTT 58.809 39.130 0.00 0.00 0.00 2.40
4340 5094 3.432046 CCAAGCACAAAACCAACCAATCT 60.432 43.478 0.00 0.00 0.00 2.40
4341 5095 2.871633 CCAAGCACAAAACCAACCAATC 59.128 45.455 0.00 0.00 0.00 2.67
4342 5096 2.421248 CCCAAGCACAAAACCAACCAAT 60.421 45.455 0.00 0.00 0.00 3.16
4343 5097 1.065854 CCCAAGCACAAAACCAACCAA 60.066 47.619 0.00 0.00 0.00 3.67
4344 5098 0.539051 CCCAAGCACAAAACCAACCA 59.461 50.000 0.00 0.00 0.00 3.67
4345 5099 0.539518 ACCCAAGCACAAAACCAACC 59.460 50.000 0.00 0.00 0.00 3.77
4346 5100 1.480545 AGACCCAAGCACAAAACCAAC 59.519 47.619 0.00 0.00 0.00 3.77
4347 5101 1.754226 GAGACCCAAGCACAAAACCAA 59.246 47.619 0.00 0.00 0.00 3.67
4348 5102 1.341482 TGAGACCCAAGCACAAAACCA 60.341 47.619 0.00 0.00 0.00 3.67
4349 5103 1.398692 TGAGACCCAAGCACAAAACC 58.601 50.000 0.00 0.00 0.00 3.27
4350 5104 3.733443 AATGAGACCCAAGCACAAAAC 57.267 42.857 0.00 0.00 0.00 2.43
4351 5105 3.703556 TCAAATGAGACCCAAGCACAAAA 59.296 39.130 0.00 0.00 0.00 2.44
4352 5106 3.068024 GTCAAATGAGACCCAAGCACAAA 59.932 43.478 0.00 0.00 32.36 2.83
4353 5107 2.622942 GTCAAATGAGACCCAAGCACAA 59.377 45.455 0.00 0.00 32.36 3.33
4354 5108 2.229792 GTCAAATGAGACCCAAGCACA 58.770 47.619 0.00 0.00 32.36 4.57
4355 5109 2.997485 GTCAAATGAGACCCAAGCAC 57.003 50.000 0.00 0.00 32.36 4.40
4363 5117 5.703876 CCAAAAGCTAAGGTCAAATGAGAC 58.296 41.667 0.00 0.00 37.80 3.36
4364 5118 4.218417 GCCAAAAGCTAAGGTCAAATGAGA 59.782 41.667 0.00 0.00 38.99 3.27
4365 5119 4.488879 GCCAAAAGCTAAGGTCAAATGAG 58.511 43.478 0.00 0.00 38.99 2.90
4366 5120 4.519540 GCCAAAAGCTAAGGTCAAATGA 57.480 40.909 0.00 0.00 38.99 2.57
4379 5133 0.607620 TAACCCATGCAGCCAAAAGC 59.392 50.000 0.00 0.00 44.25 3.51
4380 5134 1.895131 ACTAACCCATGCAGCCAAAAG 59.105 47.619 0.00 0.00 0.00 2.27
4381 5135 2.008242 ACTAACCCATGCAGCCAAAA 57.992 45.000 0.00 0.00 0.00 2.44
4382 5136 2.008242 AACTAACCCATGCAGCCAAA 57.992 45.000 0.00 0.00 0.00 3.28
4383 5137 1.617850 CAAACTAACCCATGCAGCCAA 59.382 47.619 0.00 0.00 0.00 4.52
4384 5138 1.202989 TCAAACTAACCCATGCAGCCA 60.203 47.619 0.00 0.00 0.00 4.75
4385 5139 1.544724 TCAAACTAACCCATGCAGCC 58.455 50.000 0.00 0.00 0.00 4.85
4386 5140 5.284079 CAATATCAAACTAACCCATGCAGC 58.716 41.667 0.00 0.00 0.00 5.25
4387 5141 5.163530 TGCAATATCAAACTAACCCATGCAG 60.164 40.000 0.00 0.00 35.39 4.41
4388 5142 4.708909 TGCAATATCAAACTAACCCATGCA 59.291 37.500 0.00 0.00 37.70 3.96
4389 5143 5.261209 TGCAATATCAAACTAACCCATGC 57.739 39.130 0.00 0.00 0.00 4.06
4390 5144 8.632679 ACTATTGCAATATCAAACTAACCCATG 58.367 33.333 19.17 4.89 0.00 3.66
4391 5145 8.766994 ACTATTGCAATATCAAACTAACCCAT 57.233 30.769 19.17 0.00 0.00 4.00
4392 5146 8.465999 CAACTATTGCAATATCAAACTAACCCA 58.534 33.333 19.17 0.00 0.00 4.51
4393 5147 8.466798 ACAACTATTGCAATATCAAACTAACCC 58.533 33.333 19.17 0.00 0.00 4.11
4394 5148 9.855021 AACAACTATTGCAATATCAAACTAACC 57.145 29.630 19.17 0.00 0.00 2.85
4402 5156 9.448438 ACTTCTACAACAACTATTGCAATATCA 57.552 29.630 19.17 0.00 32.47 2.15
4403 5157 9.708222 CACTTCTACAACAACTATTGCAATATC 57.292 33.333 19.17 0.00 32.47 1.63
4404 5158 8.184192 GCACTTCTACAACAACTATTGCAATAT 58.816 33.333 19.17 3.15 32.47 1.28
4405 5159 7.390440 AGCACTTCTACAACAACTATTGCAATA 59.610 33.333 17.94 17.94 32.47 1.90
4406 5160 6.207417 AGCACTTCTACAACAACTATTGCAAT 59.793 34.615 17.56 17.56 32.47 3.56
4407 5161 5.530915 AGCACTTCTACAACAACTATTGCAA 59.469 36.000 0.00 0.00 32.47 4.08
4408 5162 5.063204 AGCACTTCTACAACAACTATTGCA 58.937 37.500 0.00 0.00 32.47 4.08
4409 5163 5.613358 AGCACTTCTACAACAACTATTGC 57.387 39.130 0.00 0.00 32.47 3.56
4410 5164 8.856490 AAAAAGCACTTCTACAACAACTATTG 57.144 30.769 0.00 0.00 35.59 1.90
4426 5180 9.449719 CGGAGGGATTATATAATAAAAAGCACT 57.550 33.333 7.97 1.46 0.00 4.40
4427 5181 9.227777 ACGGAGGGATTATATAATAAAAAGCAC 57.772 33.333 7.97 0.00 0.00 4.40
4428 5182 9.802039 AACGGAGGGATTATATAATAAAAAGCA 57.198 29.630 7.97 0.00 0.00 3.91
4438 5192 9.502035 AGAATTATGGAACGGAGGGATTATATA 57.498 33.333 0.00 0.00 0.00 0.86
4439 5193 8.393959 AGAATTATGGAACGGAGGGATTATAT 57.606 34.615 0.00 0.00 0.00 0.86
4440 5194 7.808279 AGAATTATGGAACGGAGGGATTATA 57.192 36.000 0.00 0.00 0.00 0.98
4441 5195 6.704056 AGAATTATGGAACGGAGGGATTAT 57.296 37.500 0.00 0.00 0.00 1.28
4442 5196 6.126594 ACAAGAATTATGGAACGGAGGGATTA 60.127 38.462 0.00 0.00 0.00 1.75
4443 5197 5.133221 CAAGAATTATGGAACGGAGGGATT 58.867 41.667 0.00 0.00 0.00 3.01
4444 5198 4.166144 ACAAGAATTATGGAACGGAGGGAT 59.834 41.667 0.00 0.00 0.00 3.85
4445 5199 3.521937 ACAAGAATTATGGAACGGAGGGA 59.478 43.478 0.00 0.00 0.00 4.20
4446 5200 3.877508 GACAAGAATTATGGAACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
4447 5201 3.555956 CGACAAGAATTATGGAACGGAGG 59.444 47.826 0.00 0.00 0.00 4.30
4448 5202 4.032900 CACGACAAGAATTATGGAACGGAG 59.967 45.833 0.00 0.00 0.00 4.63
4449 5203 3.930229 CACGACAAGAATTATGGAACGGA 59.070 43.478 0.00 0.00 0.00 4.69
4450 5204 3.063452 CCACGACAAGAATTATGGAACGG 59.937 47.826 0.00 0.00 0.00 4.44
4451 5205 3.682858 ACCACGACAAGAATTATGGAACG 59.317 43.478 0.00 0.00 0.00 3.95
4452 5206 5.622770 AACCACGACAAGAATTATGGAAC 57.377 39.130 0.00 0.00 0.00 3.62
4453 5207 6.642707 AAAACCACGACAAGAATTATGGAA 57.357 33.333 0.00 0.00 0.00 3.53
4454 5208 6.938030 ACTAAAACCACGACAAGAATTATGGA 59.062 34.615 0.00 0.00 0.00 3.41
4455 5209 7.141100 ACTAAAACCACGACAAGAATTATGG 57.859 36.000 0.00 0.00 0.00 2.74
4461 5215 9.291664 CAAATTAAACTAAAACCACGACAAGAA 57.708 29.630 0.00 0.00 0.00 2.52
4462 5216 8.675504 TCAAATTAAACTAAAACCACGACAAGA 58.324 29.630 0.00 0.00 0.00 3.02
4463 5217 8.844441 TCAAATTAAACTAAAACCACGACAAG 57.156 30.769 0.00 0.00 0.00 3.16
4464 5218 9.074443 GTTCAAATTAAACTAAAACCACGACAA 57.926 29.630 0.00 0.00 0.00 3.18
4465 5219 7.428761 CGTTCAAATTAAACTAAAACCACGACA 59.571 33.333 0.00 0.00 0.00 4.35
4466 5220 7.639461 TCGTTCAAATTAAACTAAAACCACGAC 59.361 33.333 0.00 0.00 0.00 4.34
4467 5221 7.692088 TCGTTCAAATTAAACTAAAACCACGA 58.308 30.769 0.00 0.00 0.00 4.35
4468 5222 7.895582 TCGTTCAAATTAAACTAAAACCACG 57.104 32.000 3.09 0.00 0.00 4.94
4474 5228 8.796278 CGTGGTTTTCGTTCAAATTAAACTAAA 58.204 29.630 0.00 2.25 0.00 1.85
4475 5229 8.180267 TCGTGGTTTTCGTTCAAATTAAACTAA 58.820 29.630 0.00 0.00 0.00 2.24
4476 5230 7.639461 GTCGTGGTTTTCGTTCAAATTAAACTA 59.361 33.333 0.00 0.00 0.00 2.24
4477 5231 6.469915 GTCGTGGTTTTCGTTCAAATTAAACT 59.530 34.615 0.00 0.00 0.00 2.66
4478 5232 6.469915 AGTCGTGGTTTTCGTTCAAATTAAAC 59.530 34.615 0.00 0.00 0.00 2.01
4479 5233 6.553524 AGTCGTGGTTTTCGTTCAAATTAAA 58.446 32.000 0.00 0.00 0.00 1.52
4480 5234 6.121613 AGTCGTGGTTTTCGTTCAAATTAA 57.878 33.333 0.00 0.00 0.00 1.40
4481 5235 5.738118 AGTCGTGGTTTTCGTTCAAATTA 57.262 34.783 0.00 0.00 0.00 1.40
4482 5236 4.625972 AGTCGTGGTTTTCGTTCAAATT 57.374 36.364 0.00 0.00 0.00 1.82
4483 5237 5.051816 TCTAGTCGTGGTTTTCGTTCAAAT 58.948 37.500 0.00 0.00 0.00 2.32
4484 5238 4.431809 TCTAGTCGTGGTTTTCGTTCAAA 58.568 39.130 0.00 0.00 0.00 2.69
4485 5239 4.044336 TCTAGTCGTGGTTTTCGTTCAA 57.956 40.909 0.00 0.00 0.00 2.69
4486 5240 3.713858 TCTAGTCGTGGTTTTCGTTCA 57.286 42.857 0.00 0.00 0.00 3.18
4487 5241 5.587033 AATTCTAGTCGTGGTTTTCGTTC 57.413 39.130 0.00 0.00 0.00 3.95
4488 5242 6.091713 CCATAATTCTAGTCGTGGTTTTCGTT 59.908 38.462 0.00 0.00 0.00 3.85
4489 5243 5.579511 CCATAATTCTAGTCGTGGTTTTCGT 59.420 40.000 0.00 0.00 0.00 3.85
4490 5244 5.808540 TCCATAATTCTAGTCGTGGTTTTCG 59.191 40.000 0.00 0.00 0.00 3.46
4491 5245 7.605410 TTCCATAATTCTAGTCGTGGTTTTC 57.395 36.000 0.00 0.00 0.00 2.29
4492 5246 7.120726 CCTTTCCATAATTCTAGTCGTGGTTTT 59.879 37.037 0.00 0.00 0.00 2.43
4493 5247 6.598064 CCTTTCCATAATTCTAGTCGTGGTTT 59.402 38.462 0.00 0.00 0.00 3.27
4494 5248 6.070424 TCCTTTCCATAATTCTAGTCGTGGTT 60.070 38.462 0.00 0.00 0.00 3.67
4495 5249 5.424252 TCCTTTCCATAATTCTAGTCGTGGT 59.576 40.000 0.00 0.00 0.00 4.16
4496 5250 5.914033 TCCTTTCCATAATTCTAGTCGTGG 58.086 41.667 0.00 0.00 0.00 4.94
4497 5251 5.986135 CCTCCTTTCCATAATTCTAGTCGTG 59.014 44.000 0.00 0.00 0.00 4.35
4498 5252 5.070580 CCCTCCTTTCCATAATTCTAGTCGT 59.929 44.000 0.00 0.00 0.00 4.34
4499 5253 5.304614 TCCCTCCTTTCCATAATTCTAGTCG 59.695 44.000 0.00 0.00 0.00 4.18
4500 5254 6.327887 ACTCCCTCCTTTCCATAATTCTAGTC 59.672 42.308 0.00 0.00 0.00 2.59
4501 5255 6.213525 ACTCCCTCCTTTCCATAATTCTAGT 58.786 40.000 0.00 0.00 0.00 2.57
4502 5256 6.755542 ACTCCCTCCTTTCCATAATTCTAG 57.244 41.667 0.00 0.00 0.00 2.43
4503 5257 7.371043 AGTACTCCCTCCTTTCCATAATTCTA 58.629 38.462 0.00 0.00 0.00 2.10
4504 5258 6.213525 AGTACTCCCTCCTTTCCATAATTCT 58.786 40.000 0.00 0.00 0.00 2.40
4505 5259 6.502074 AGTACTCCCTCCTTTCCATAATTC 57.498 41.667 0.00 0.00 0.00 2.17
4506 5260 7.140304 AGTAGTACTCCCTCCTTTCCATAATT 58.860 38.462 0.00 0.00 0.00 1.40
4507 5261 6.694611 AGTAGTACTCCCTCCTTTCCATAAT 58.305 40.000 0.00 0.00 0.00 1.28
4508 5262 6.101274 AGTAGTACTCCCTCCTTTCCATAA 57.899 41.667 0.00 0.00 0.00 1.90
4509 5263 5.745988 AGTAGTACTCCCTCCTTTCCATA 57.254 43.478 0.00 0.00 0.00 2.74
4510 5264 4.628661 AGTAGTACTCCCTCCTTTCCAT 57.371 45.455 0.00 0.00 0.00 3.41
4511 5265 4.415224 AAGTAGTACTCCCTCCTTTCCA 57.585 45.455 2.58 0.00 0.00 3.53
4512 5266 5.758790 AAAAGTAGTACTCCCTCCTTTCC 57.241 43.478 2.58 0.00 0.00 3.13
4513 5267 7.178097 TCACTAAAAGTAGTACTCCCTCCTTTC 59.822 40.741 2.58 0.00 38.58 2.62
4514 5268 7.015064 TCACTAAAAGTAGTACTCCCTCCTTT 58.985 38.462 2.58 2.25 38.58 3.11
4515 5269 6.559429 TCACTAAAAGTAGTACTCCCTCCTT 58.441 40.000 2.58 0.00 38.58 3.36
4516 5270 6.150034 TCACTAAAAGTAGTACTCCCTCCT 57.850 41.667 2.58 0.00 38.58 3.69
4517 5271 6.847421 TTCACTAAAAGTAGTACTCCCTCC 57.153 41.667 2.58 0.00 38.58 4.30
4544 5298 9.921637 TTCTTGAAAAACGGCAATTTATTATCT 57.078 25.926 0.00 0.00 0.00 1.98
4580 5334 9.056005 GCCAATTCTAGTACAATATTCATGTCA 57.944 33.333 0.00 0.00 32.27 3.58
4581 5335 9.056005 TGCCAATTCTAGTACAATATTCATGTC 57.944 33.333 0.00 0.00 32.27 3.06
4582 5336 8.978874 TGCCAATTCTAGTACAATATTCATGT 57.021 30.769 0.00 0.00 34.81 3.21
4585 5339 9.679661 TCTTTGCCAATTCTAGTACAATATTCA 57.320 29.630 0.00 0.00 0.00 2.57
4593 5347 7.617041 ACAGAATCTTTGCCAATTCTAGTAC 57.383 36.000 0.00 0.00 39.59 2.73
4596 5350 9.512435 CATTAACAGAATCTTTGCCAATTCTAG 57.488 33.333 0.00 0.00 39.59 2.43
4605 5359 9.578439 AATTAGCTTCATTAACAGAATCTTTGC 57.422 29.630 0.00 0.00 0.00 3.68
4644 5398 6.352516 TGTGCTGTGGGACAAATTTTATTTT 58.647 32.000 0.00 0.00 44.16 1.82
4656 5411 1.089920 GATGTCATGTGCTGTGGGAC 58.910 55.000 0.00 0.00 0.00 4.46
4658 5413 0.674581 ACGATGTCATGTGCTGTGGG 60.675 55.000 0.00 0.00 0.00 4.61
4666 5421 0.321346 TCCACTGCACGATGTCATGT 59.679 50.000 0.00 0.00 0.00 3.21
4675 5430 1.670087 CCAAGTAGAGTCCACTGCACG 60.670 57.143 0.00 0.00 0.00 5.34
4686 5441 3.777478 CAATGCCAATTGCCAAGTAGAG 58.223 45.455 0.00 0.00 36.99 2.43
4687 5442 3.872511 CAATGCCAATTGCCAAGTAGA 57.127 42.857 0.00 0.00 36.99 2.59
4716 5492 0.520404 GCACAGTGGACAATCTGCAG 59.480 55.000 7.63 7.63 35.37 4.41
4718 5494 0.520404 CAGCACAGTGGACAATCTGC 59.480 55.000 1.84 0.00 35.37 4.26
4729 5505 2.598565 TCTCCTAGAACACAGCACAGT 58.401 47.619 0.00 0.00 0.00 3.55
4787 5563 4.630894 TGCAGGGCGAATAAACATAAAG 57.369 40.909 0.00 0.00 0.00 1.85
4789 5594 5.590530 AAATGCAGGGCGAATAAACATAA 57.409 34.783 0.00 0.00 0.00 1.90
4842 5647 5.624159 TCTGCAAGGAAGAAGATTCAAGAA 58.376 37.500 0.00 0.00 0.00 2.52
5001 5814 3.051210 CAGTCAGCTGGTGGTCGA 58.949 61.111 15.13 0.00 39.01 4.20
5002 5815 2.740055 GCAGTCAGCTGGTGGTCG 60.740 66.667 15.13 0.00 42.78 4.79
5003 5816 1.670406 CTGCAGTCAGCTGGTGGTC 60.670 63.158 15.13 0.51 45.94 4.02
5090 5909 2.997315 CCTGAGTCGGAGGTGGCA 60.997 66.667 0.00 0.00 0.00 4.92
5131 5957 4.202461 TGTTCAGACTACAGGCCAAAGAAT 60.202 41.667 5.01 0.00 0.00 2.40
5200 6032 6.093404 CGTGCACTACTTTATTTCTCTCTCA 58.907 40.000 16.19 0.00 0.00 3.27
5203 6035 4.865365 AGCGTGCACTACTTTATTTCTCTC 59.135 41.667 16.19 0.00 0.00 3.20
5204 6036 4.627467 CAGCGTGCACTACTTTATTTCTCT 59.373 41.667 16.19 0.00 0.00 3.10
5279 6113 9.006839 CCGTGTAACCTATTCTATGATGTACTA 57.993 37.037 0.00 0.00 0.00 1.82
5280 6114 7.039923 CCCGTGTAACCTATTCTATGATGTACT 60.040 40.741 0.00 0.00 0.00 2.73
5281 6115 7.088905 CCCGTGTAACCTATTCTATGATGTAC 58.911 42.308 0.00 0.00 0.00 2.90
5365 6221 0.609131 AATGTTGCCGTTGCTAGCCT 60.609 50.000 13.29 0.00 38.71 4.58
5480 7297 2.263077 CATGCTCTCTAACGTGTGTCC 58.737 52.381 0.00 0.00 0.00 4.02
5483 7300 1.002366 GGCATGCTCTCTAACGTGTG 58.998 55.000 18.92 0.00 0.00 3.82
5484 7301 0.608130 TGGCATGCTCTCTAACGTGT 59.392 50.000 18.92 0.00 0.00 4.49
5489 7306 7.828508 AATGATAATTTGGCATGCTCTCTAA 57.171 32.000 18.92 4.72 0.00 2.10
5493 7310 8.185506 TCATAAATGATAATTTGGCATGCTCT 57.814 30.769 18.92 0.31 0.00 4.09
5550 10711 2.294233 GAGAAAAATGAGCAGCACACCA 59.706 45.455 0.00 0.00 0.00 4.17
5607 10770 1.003573 AAGAGAGGCCGGGGAGAAT 59.996 57.895 2.18 0.00 0.00 2.40
5629 10792 1.736586 CCACCGAATCCTCCGAGAG 59.263 63.158 0.00 0.00 0.00 3.20
5634 10797 2.590092 CCACCCACCGAATCCTCC 59.410 66.667 0.00 0.00 0.00 4.30
5737 10906 3.369471 GCACATAAGTACTCTGCCCTTCA 60.369 47.826 0.00 0.00 0.00 3.02
5749 10918 6.488344 TGACCAATGAAACTTGCACATAAGTA 59.512 34.615 0.00 0.00 39.86 2.24
5750 10919 5.301551 TGACCAATGAAACTTGCACATAAGT 59.698 36.000 0.00 0.00 42.43 2.24
5751 10920 5.630680 GTGACCAATGAAACTTGCACATAAG 59.369 40.000 0.00 0.00 0.00 1.73
5752 10921 5.301551 AGTGACCAATGAAACTTGCACATAA 59.698 36.000 0.00 0.00 0.00 1.90
5885 11059 2.052047 AACAGGTACAAGCACGGCCT 62.052 55.000 0.00 0.00 0.00 5.19
5887 11061 1.574702 GGAACAGGTACAAGCACGGC 61.575 60.000 0.00 0.00 0.00 5.68
6031 11205 0.182775 AAGTCCAAGGGCGAAACTGT 59.817 50.000 0.00 0.00 0.00 3.55
6033 11207 0.250770 GGAAGTCCAAGGGCGAAACT 60.251 55.000 0.00 0.00 35.64 2.66
6058 11232 0.662619 TTTTCTGGAGCAGCAACACG 59.337 50.000 0.00 0.00 0.00 4.49
6072 11246 0.036306 ATCACGGCCGACCTTTTTCT 59.964 50.000 35.90 1.64 0.00 2.52
6075 11249 0.953960 GTGATCACGGCCGACCTTTT 60.954 55.000 35.90 4.54 0.00 2.27
6094 11268 0.861837 GCTCGTCATATTTGAGGCGG 59.138 55.000 1.49 0.00 37.60 6.13


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.