Multiple sequence alignment - TraesCS2B01G008300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G008300 chr2B 100.000 3928 0 0 548 4475 4754746 4750819 0.000000e+00 7254.0
1 TraesCS2B01G008300 chr2B 79.380 2677 415 80 991 3571 729766586 729769221 0.000000e+00 1759.0
2 TraesCS2B01G008300 chr2B 78.585 2587 428 80 989 3476 548623979 548626538 0.000000e+00 1592.0
3 TraesCS2B01G008300 chr2B 79.955 1796 275 45 1079 2819 548609597 548611362 0.000000e+00 1243.0
4 TraesCS2B01G008300 chr2B 77.098 882 187 13 2569 3444 451455590 451456462 3.110000e-136 496.0
5 TraesCS2B01G008300 chr2B 100.000 266 0 0 1 266 4755293 4755028 4.020000e-135 492.0
6 TraesCS2B01G008300 chr2D 95.485 3322 105 16 664 3971 8349256 8345966 0.000000e+00 5262.0
7 TraesCS2B01G008300 chr2D 80.735 2476 369 58 1079 3476 469984124 469986569 0.000000e+00 1831.0
8 TraesCS2B01G008300 chr2D 79.791 2578 396 71 1082 3571 599926510 599929050 0.000000e+00 1759.0
9 TraesCS2B01G008300 chr2D 76.923 884 185 17 2569 3444 380079659 380080531 6.730000e-133 484.0
10 TraesCS2B01G008300 chr2D 95.357 280 9 2 4193 4468 8345882 8345603 4.110000e-120 442.0
11 TraesCS2B01G008300 chr2D 95.455 44 2 0 595 638 8349306 8349263 2.230000e-08 71.3
12 TraesCS2B01G008300 chr2A 79.723 2599 403 72 1061 3571 733628969 733631531 0.000000e+00 1766.0
13 TraesCS2B01G008300 chr2A 79.605 1417 205 44 1079 2444 611296244 611297627 0.000000e+00 939.0
14 TraesCS2B01G008300 chr2A 76.949 885 183 18 2569 3444 515303896 515304768 6.730000e-133 484.0
15 TraesCS2B01G008300 chr2A 92.470 332 13 6 590 911 7409549 7409220 8.770000e-127 464.0
16 TraesCS2B01G008300 chr2A 91.444 187 13 3 4282 4468 7409220 7409037 2.070000e-63 254.0
17 TraesCS2B01G008300 chr5A 79.236 2591 402 79 1079 3573 12194136 12191586 0.000000e+00 1679.0
18 TraesCS2B01G008300 chr5B 78.843 2680 411 91 1000 3573 13776132 13773503 0.000000e+00 1664.0
19 TraesCS2B01G008300 chr5B 77.887 2433 409 61 1102 3453 549548094 549550478 0.000000e+00 1393.0
20 TraesCS2B01G008300 chr1B 78.681 2669 423 80 1000 3573 548193684 548191067 0.000000e+00 1642.0
21 TraesCS2B01G008300 chr1B 76.763 2539 473 71 1117 3573 8261437 8258934 0.000000e+00 1312.0
22 TraesCS2B01G008300 chr1B 76.299 2097 359 63 1102 3126 9175480 9177510 0.000000e+00 992.0
23 TraesCS2B01G008300 chr1B 75.044 569 103 19 1103 1644 9281374 9281930 1.250000e-55 228.0
24 TraesCS2B01G008300 chr1D 78.673 2682 417 85 1000 3573 407672543 407669909 0.000000e+00 1640.0
25 TraesCS2B01G008300 chr1D 77.713 2589 460 76 1077 3573 6913245 6915808 0.000000e+00 1476.0
26 TraesCS2B01G008300 chr1D 77.909 2449 401 64 1102 3453 6898557 6900962 0.000000e+00 1397.0
27 TraesCS2B01G008300 chr1D 76.763 2552 474 73 1105 3573 5524034 5521519 0.000000e+00 1317.0
28 TraesCS2B01G008300 chr1A 77.864 2575 433 78 999 3476 7834683 7837217 0.000000e+00 1471.0
29 TraesCS2B01G008300 chr1A 77.926 2555 415 69 989 3446 8327135 8329637 0.000000e+00 1456.0
30 TraesCS2B01G008300 chr1A 76.882 2431 457 66 1210 3573 7191250 7188858 0.000000e+00 1279.0
31 TraesCS2B01G008300 chr3A 77.352 2508 459 59 1028 3476 45083656 45086113 0.000000e+00 1384.0
32 TraesCS2B01G008300 chr3A 78.255 2051 378 44 1434 3444 678314571 678316593 0.000000e+00 1254.0
33 TraesCS2B01G008300 chr3B 77.344 2410 440 70 1079 3444 805337592 805339939 0.000000e+00 1328.0
34 TraesCS2B01G008300 chr5D 81.556 1285 187 29 2334 3573 18085125 18086404 0.000000e+00 1014.0
35 TraesCS2B01G008300 chr5D 75.927 1375 242 51 1000 2325 18083677 18085011 1.370000e-174 623.0
36 TraesCS2B01G008300 chr7A 75.875 829 178 14 2540 3357 625615737 625614920 1.940000e-108 403.0
37 TraesCS2B01G008300 chr7D 100.000 28 0 0 1491 1518 101730778 101730805 8.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G008300 chr2B 4750819 4755293 4474 True 3873.0 7254 100.000000 1 4475 2 chr2B.!!$R1 4474
1 TraesCS2B01G008300 chr2B 729766586 729769221 2635 False 1759.0 1759 79.380000 991 3571 1 chr2B.!!$F4 2580
2 TraesCS2B01G008300 chr2B 548623979 548626538 2559 False 1592.0 1592 78.585000 989 3476 1 chr2B.!!$F3 2487
3 TraesCS2B01G008300 chr2B 548609597 548611362 1765 False 1243.0 1243 79.955000 1079 2819 1 chr2B.!!$F2 1740
4 TraesCS2B01G008300 chr2B 451455590 451456462 872 False 496.0 496 77.098000 2569 3444 1 chr2B.!!$F1 875
5 TraesCS2B01G008300 chr2D 8345603 8349306 3703 True 1925.1 5262 95.432333 595 4468 3 chr2D.!!$R1 3873
6 TraesCS2B01G008300 chr2D 469984124 469986569 2445 False 1831.0 1831 80.735000 1079 3476 1 chr2D.!!$F2 2397
7 TraesCS2B01G008300 chr2D 599926510 599929050 2540 False 1759.0 1759 79.791000 1082 3571 1 chr2D.!!$F3 2489
8 TraesCS2B01G008300 chr2D 380079659 380080531 872 False 484.0 484 76.923000 2569 3444 1 chr2D.!!$F1 875
9 TraesCS2B01G008300 chr2A 733628969 733631531 2562 False 1766.0 1766 79.723000 1061 3571 1 chr2A.!!$F3 2510
10 TraesCS2B01G008300 chr2A 611296244 611297627 1383 False 939.0 939 79.605000 1079 2444 1 chr2A.!!$F2 1365
11 TraesCS2B01G008300 chr2A 515303896 515304768 872 False 484.0 484 76.949000 2569 3444 1 chr2A.!!$F1 875
12 TraesCS2B01G008300 chr2A 7409037 7409549 512 True 359.0 464 91.957000 590 4468 2 chr2A.!!$R1 3878
13 TraesCS2B01G008300 chr5A 12191586 12194136 2550 True 1679.0 1679 79.236000 1079 3573 1 chr5A.!!$R1 2494
14 TraesCS2B01G008300 chr5B 13773503 13776132 2629 True 1664.0 1664 78.843000 1000 3573 1 chr5B.!!$R1 2573
15 TraesCS2B01G008300 chr5B 549548094 549550478 2384 False 1393.0 1393 77.887000 1102 3453 1 chr5B.!!$F1 2351
16 TraesCS2B01G008300 chr1B 548191067 548193684 2617 True 1642.0 1642 78.681000 1000 3573 1 chr1B.!!$R2 2573
17 TraesCS2B01G008300 chr1B 8258934 8261437 2503 True 1312.0 1312 76.763000 1117 3573 1 chr1B.!!$R1 2456
18 TraesCS2B01G008300 chr1B 9175480 9177510 2030 False 992.0 992 76.299000 1102 3126 1 chr1B.!!$F1 2024
19 TraesCS2B01G008300 chr1B 9281374 9281930 556 False 228.0 228 75.044000 1103 1644 1 chr1B.!!$F2 541
20 TraesCS2B01G008300 chr1D 407669909 407672543 2634 True 1640.0 1640 78.673000 1000 3573 1 chr1D.!!$R2 2573
21 TraesCS2B01G008300 chr1D 6913245 6915808 2563 False 1476.0 1476 77.713000 1077 3573 1 chr1D.!!$F2 2496
22 TraesCS2B01G008300 chr1D 6898557 6900962 2405 False 1397.0 1397 77.909000 1102 3453 1 chr1D.!!$F1 2351
23 TraesCS2B01G008300 chr1D 5521519 5524034 2515 True 1317.0 1317 76.763000 1105 3573 1 chr1D.!!$R1 2468
24 TraesCS2B01G008300 chr1A 7834683 7837217 2534 False 1471.0 1471 77.864000 999 3476 1 chr1A.!!$F1 2477
25 TraesCS2B01G008300 chr1A 8327135 8329637 2502 False 1456.0 1456 77.926000 989 3446 1 chr1A.!!$F2 2457
26 TraesCS2B01G008300 chr1A 7188858 7191250 2392 True 1279.0 1279 76.882000 1210 3573 1 chr1A.!!$R1 2363
27 TraesCS2B01G008300 chr3A 45083656 45086113 2457 False 1384.0 1384 77.352000 1028 3476 1 chr3A.!!$F1 2448
28 TraesCS2B01G008300 chr3A 678314571 678316593 2022 False 1254.0 1254 78.255000 1434 3444 1 chr3A.!!$F2 2010
29 TraesCS2B01G008300 chr3B 805337592 805339939 2347 False 1328.0 1328 77.344000 1079 3444 1 chr3B.!!$F1 2365
30 TraesCS2B01G008300 chr5D 18083677 18086404 2727 False 818.5 1014 78.741500 1000 3573 2 chr5D.!!$F1 2573
31 TraesCS2B01G008300 chr7A 625614920 625615737 817 True 403.0 403 75.875000 2540 3357 1 chr7A.!!$R1 817

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
180 181 0.035056 AAATTCCCCGCCAGTCTCTG 60.035 55.000 0.0 0.0 0.00 3.35 F
587 588 0.036952 CAGCAGGTTCGTGGATGACT 60.037 55.000 0.0 0.0 0.00 3.41 F
592 593 0.242825 GGTTCGTGGATGACTCGTGA 59.757 55.000 0.0 0.0 0.00 4.35 F
920 932 1.151668 CACTTGTTCTGCCTTCTCCG 58.848 55.000 0.0 0.0 0.00 4.63 F
1094 1120 1.202463 ACATGATACTCTCACGGCTGC 60.202 52.381 0.0 0.0 36.48 5.25 F
1917 2072 1.433053 CCGAACAGTCGTGGCAAACA 61.433 55.000 0.0 0.0 46.21 2.83 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1995 2150 0.108804 AGAATGGACGTGCAGTACCG 60.109 55.000 16.77 0.00 30.72 4.02 R
2000 2155 1.730501 ATCACAGAATGGACGTGCAG 58.269 50.000 16.77 4.06 43.62 4.41 R
2001 2156 1.805943 CAATCACAGAATGGACGTGCA 59.194 47.619 13.59 13.59 43.62 4.57 R
2862 3179 4.020128 CCTAGGGCTATTTGATACCTGGTC 60.020 50.000 0.63 0.00 32.87 4.02 R
3236 3590 1.334869 CCACATCGCCTTTATGAAGCC 59.665 52.381 0.00 0.00 0.00 4.35 R
4042 4416 0.179086 TCGCAGTGCAGTGAAAGTGA 60.179 50.000 25.76 7.23 40.62 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 1.079750 GTCGGAGAGGACAGTTGGC 60.080 63.158 0.00 0.00 36.95 4.52
19 20 2.266055 CGGAGAGGACAGTTGGCC 59.734 66.667 0.00 0.00 46.16 5.36
25 26 2.668550 GGACAGTTGGCCGGTGAC 60.669 66.667 1.90 0.00 30.66 3.67
26 27 2.110213 GACAGTTGGCCGGTGACA 59.890 61.111 1.90 0.00 0.00 3.58
27 28 1.525077 GACAGTTGGCCGGTGACAA 60.525 57.895 1.90 3.57 0.00 3.18
28 29 1.077357 ACAGTTGGCCGGTGACAAA 60.077 52.632 1.90 0.00 0.00 2.83
29 30 1.101049 ACAGTTGGCCGGTGACAAAG 61.101 55.000 1.90 5.70 0.00 2.77
30 31 1.528309 AGTTGGCCGGTGACAAAGG 60.528 57.895 1.90 0.00 0.00 3.11
31 32 1.826487 GTTGGCCGGTGACAAAGGT 60.826 57.895 1.90 0.00 0.00 3.50
32 33 1.826054 TTGGCCGGTGACAAAGGTG 60.826 57.895 1.90 0.00 0.00 4.00
33 34 2.203294 GGCCGGTGACAAAGGTGT 60.203 61.111 1.90 0.00 42.10 4.16
34 35 2.551912 GGCCGGTGACAAAGGTGTG 61.552 63.158 1.90 0.00 38.41 3.82
35 36 1.525077 GCCGGTGACAAAGGTGTGA 60.525 57.895 1.90 0.00 38.41 3.58
36 37 1.507141 GCCGGTGACAAAGGTGTGAG 61.507 60.000 1.90 0.00 38.41 3.51
37 38 0.884704 CCGGTGACAAAGGTGTGAGG 60.885 60.000 0.00 0.00 38.41 3.86
38 39 0.884704 CGGTGACAAAGGTGTGAGGG 60.885 60.000 0.00 0.00 38.41 4.30
39 40 1.172812 GGTGACAAAGGTGTGAGGGC 61.173 60.000 0.00 0.00 38.41 5.19
40 41 1.227823 TGACAAAGGTGTGAGGGCG 60.228 57.895 0.00 0.00 38.41 6.13
41 42 1.070786 GACAAAGGTGTGAGGGCGA 59.929 57.895 0.00 0.00 38.41 5.54
42 43 1.227853 ACAAAGGTGTGAGGGCGAC 60.228 57.895 0.00 0.00 36.31 5.19
43 44 2.676163 ACAAAGGTGTGAGGGCGACC 62.676 60.000 0.00 0.00 44.55 4.79
54 55 4.436998 GGCGACCAGGACGTGAGG 62.437 72.222 13.01 0.00 0.00 3.86
55 56 4.436998 GCGACCAGGACGTGAGGG 62.437 72.222 13.01 0.00 0.00 4.30
56 57 2.989824 CGACCAGGACGTGAGGGT 60.990 66.667 2.81 0.00 36.05 4.34
57 58 1.676635 CGACCAGGACGTGAGGGTA 60.677 63.158 2.81 0.00 32.77 3.69
58 59 1.654954 CGACCAGGACGTGAGGGTAG 61.655 65.000 2.81 0.00 32.77 3.18
59 60 0.611340 GACCAGGACGTGAGGGTAGT 60.611 60.000 0.00 0.00 32.77 2.73
60 61 0.898789 ACCAGGACGTGAGGGTAGTG 60.899 60.000 0.00 0.00 0.00 2.74
61 62 0.611062 CCAGGACGTGAGGGTAGTGA 60.611 60.000 0.00 0.00 0.00 3.41
62 63 1.475403 CAGGACGTGAGGGTAGTGAT 58.525 55.000 0.00 0.00 0.00 3.06
63 64 1.135139 CAGGACGTGAGGGTAGTGATG 59.865 57.143 0.00 0.00 0.00 3.07
64 65 1.005569 AGGACGTGAGGGTAGTGATGA 59.994 52.381 0.00 0.00 0.00 2.92
65 66 1.134560 GGACGTGAGGGTAGTGATGAC 59.865 57.143 0.00 0.00 0.00 3.06
66 67 0.809385 ACGTGAGGGTAGTGATGACG 59.191 55.000 0.00 0.00 0.00 4.35
67 68 0.100682 CGTGAGGGTAGTGATGACGG 59.899 60.000 0.00 0.00 0.00 4.79
68 69 0.179108 GTGAGGGTAGTGATGACGGC 60.179 60.000 0.00 0.00 0.00 5.68
69 70 0.613572 TGAGGGTAGTGATGACGGCA 60.614 55.000 0.00 0.00 0.00 5.69
70 71 0.753262 GAGGGTAGTGATGACGGCAT 59.247 55.000 1.48 1.48 37.47 4.40
100 101 3.764049 GACGACGGCGCTTGTGAC 61.764 66.667 12.58 0.00 42.48 3.67
108 109 3.334751 CGCTTGTGACGGCGTGAA 61.335 61.111 21.19 6.40 45.34 3.18
109 110 2.551270 GCTTGTGACGGCGTGAAG 59.449 61.111 21.19 17.24 0.00 3.02
110 111 1.954146 GCTTGTGACGGCGTGAAGA 60.954 57.895 21.19 0.00 0.00 2.87
111 112 1.291877 GCTTGTGACGGCGTGAAGAT 61.292 55.000 21.19 0.00 0.00 2.40
112 113 1.148310 CTTGTGACGGCGTGAAGATT 58.852 50.000 21.19 0.00 0.00 2.40
113 114 1.126846 CTTGTGACGGCGTGAAGATTC 59.873 52.381 21.19 0.36 0.00 2.52
114 115 1.006825 TGTGACGGCGTGAAGATTCG 61.007 55.000 21.19 0.00 0.00 3.34
115 116 1.445410 TGACGGCGTGAAGATTCGG 60.445 57.895 21.19 0.00 0.00 4.30
116 117 2.125673 ACGGCGTGAAGATTCGGG 60.126 61.111 13.76 0.00 0.00 5.14
117 118 2.890474 CGGCGTGAAGATTCGGGG 60.890 66.667 0.00 0.00 0.00 5.73
118 119 2.267961 GGCGTGAAGATTCGGGGT 59.732 61.111 0.00 0.00 0.00 4.95
119 120 1.376812 GGCGTGAAGATTCGGGGTT 60.377 57.895 0.00 0.00 0.00 4.11
120 121 1.644786 GGCGTGAAGATTCGGGGTTG 61.645 60.000 0.00 0.00 0.00 3.77
121 122 1.644786 GCGTGAAGATTCGGGGTTGG 61.645 60.000 0.00 0.00 0.00 3.77
122 123 1.644786 CGTGAAGATTCGGGGTTGGC 61.645 60.000 0.00 0.00 0.00 4.52
123 124 1.376683 TGAAGATTCGGGGTTGGCG 60.377 57.895 0.00 0.00 0.00 5.69
124 125 2.045340 AAGATTCGGGGTTGGCGG 60.045 61.111 0.00 0.00 0.00 6.13
125 126 4.796495 AGATTCGGGGTTGGCGGC 62.796 66.667 0.00 0.00 0.00 6.53
140 141 4.832608 GGCGGTCAGGGCGTAAGG 62.833 72.222 0.00 0.00 38.28 2.69
141 142 4.832608 GCGGTCAGGGCGTAAGGG 62.833 72.222 0.00 0.00 38.28 3.95
142 143 4.832608 CGGTCAGGGCGTAAGGGC 62.833 72.222 0.00 0.00 41.35 5.19
143 144 4.832608 GGTCAGGGCGTAAGGGCG 62.833 72.222 0.00 0.00 43.46 6.13
144 145 4.832608 GTCAGGGCGTAAGGGCGG 62.833 72.222 0.00 0.00 43.46 6.13
148 149 4.171103 GGGCGTAAGGGCGGTGAT 62.171 66.667 0.00 0.00 43.46 3.06
149 150 2.895372 GGCGTAAGGGCGGTGATG 60.895 66.667 0.00 0.00 38.28 3.07
150 151 3.573491 GCGTAAGGGCGGTGATGC 61.573 66.667 0.00 0.00 38.28 3.91
160 161 3.053291 GGTGATGCCGGCGAAACA 61.053 61.111 23.90 15.72 0.00 2.83
161 162 2.622011 GGTGATGCCGGCGAAACAA 61.622 57.895 23.90 2.33 0.00 2.83
162 163 1.284408 GTGATGCCGGCGAAACAAA 59.716 52.632 23.90 1.41 0.00 2.83
163 164 0.318275 GTGATGCCGGCGAAACAAAA 60.318 50.000 23.90 0.49 0.00 2.44
164 165 0.600557 TGATGCCGGCGAAACAAAAT 59.399 45.000 23.90 6.65 0.00 1.82
165 166 1.000283 TGATGCCGGCGAAACAAAATT 60.000 42.857 23.90 0.00 0.00 1.82
166 167 1.653609 GATGCCGGCGAAACAAAATTC 59.346 47.619 23.90 1.74 0.00 2.17
167 168 0.319125 TGCCGGCGAAACAAAATTCC 60.319 50.000 23.90 0.00 0.00 3.01
168 169 1.011968 GCCGGCGAAACAAAATTCCC 61.012 55.000 12.58 0.00 0.00 3.97
169 170 0.389296 CCGGCGAAACAAAATTCCCC 60.389 55.000 9.30 0.00 0.00 4.81
170 171 0.731174 CGGCGAAACAAAATTCCCCG 60.731 55.000 0.00 0.00 42.35 5.73
171 172 1.011968 GGCGAAACAAAATTCCCCGC 61.012 55.000 0.00 0.00 40.33 6.13
172 173 1.011968 GCGAAACAAAATTCCCCGCC 61.012 55.000 0.00 0.00 35.79 6.13
173 174 0.315568 CGAAACAAAATTCCCCGCCA 59.684 50.000 0.00 0.00 0.00 5.69
174 175 1.668628 CGAAACAAAATTCCCCGCCAG 60.669 52.381 0.00 0.00 0.00 4.85
175 176 1.343142 GAAACAAAATTCCCCGCCAGT 59.657 47.619 0.00 0.00 0.00 4.00
176 177 0.966179 AACAAAATTCCCCGCCAGTC 59.034 50.000 0.00 0.00 0.00 3.51
177 178 0.112412 ACAAAATTCCCCGCCAGTCT 59.888 50.000 0.00 0.00 0.00 3.24
178 179 0.811281 CAAAATTCCCCGCCAGTCTC 59.189 55.000 0.00 0.00 0.00 3.36
179 180 0.698818 AAAATTCCCCGCCAGTCTCT 59.301 50.000 0.00 0.00 0.00 3.10
180 181 0.035056 AAATTCCCCGCCAGTCTCTG 60.035 55.000 0.00 0.00 0.00 3.35
181 182 0.909610 AATTCCCCGCCAGTCTCTGA 60.910 55.000 0.00 0.00 32.44 3.27
182 183 0.692419 ATTCCCCGCCAGTCTCTGAT 60.692 55.000 0.00 0.00 32.44 2.90
183 184 1.617018 TTCCCCGCCAGTCTCTGATG 61.617 60.000 0.00 0.00 32.44 3.07
184 185 2.060383 CCCCGCCAGTCTCTGATGA 61.060 63.158 0.00 0.00 32.44 2.92
185 186 1.617018 CCCCGCCAGTCTCTGATGAA 61.617 60.000 0.00 0.00 32.44 2.57
186 187 0.179089 CCCGCCAGTCTCTGATGAAG 60.179 60.000 0.00 0.00 32.44 3.02
187 188 0.179089 CCGCCAGTCTCTGATGAAGG 60.179 60.000 0.00 0.00 32.44 3.46
188 189 0.809241 CGCCAGTCTCTGATGAAGGC 60.809 60.000 0.00 0.00 36.59 4.35
189 190 0.809241 GCCAGTCTCTGATGAAGGCG 60.809 60.000 0.00 0.00 32.44 5.52
190 191 0.179089 CCAGTCTCTGATGAAGGCGG 60.179 60.000 0.00 0.00 32.44 6.13
191 192 0.534412 CAGTCTCTGATGAAGGCGGT 59.466 55.000 0.00 0.00 32.44 5.68
192 193 1.751351 CAGTCTCTGATGAAGGCGGTA 59.249 52.381 0.00 0.00 32.44 4.02
193 194 2.028130 AGTCTCTGATGAAGGCGGTAG 58.972 52.381 0.00 0.00 0.00 3.18
194 195 0.747255 TCTCTGATGAAGGCGGTAGC 59.253 55.000 0.00 0.00 44.18 3.58
204 205 4.932789 GCGGTAGCAGGAATGACA 57.067 55.556 0.00 0.00 44.35 3.58
205 206 3.153024 GCGGTAGCAGGAATGACAA 57.847 52.632 0.00 0.00 44.35 3.18
206 207 1.668419 GCGGTAGCAGGAATGACAAT 58.332 50.000 0.00 0.00 44.35 2.71
207 208 1.331756 GCGGTAGCAGGAATGACAATG 59.668 52.381 0.00 0.00 44.35 2.82
208 209 1.942657 CGGTAGCAGGAATGACAATGG 59.057 52.381 0.00 0.00 0.00 3.16
209 210 2.301346 GGTAGCAGGAATGACAATGGG 58.699 52.381 0.00 0.00 0.00 4.00
210 211 1.678101 GTAGCAGGAATGACAATGGGC 59.322 52.381 0.00 0.00 0.00 5.36
211 212 0.040058 AGCAGGAATGACAATGGGCA 59.960 50.000 0.00 0.00 0.00 5.36
212 213 0.896923 GCAGGAATGACAATGGGCAA 59.103 50.000 0.00 0.00 0.00 4.52
213 214 1.483415 GCAGGAATGACAATGGGCAAT 59.517 47.619 0.00 0.00 0.00 3.56
214 215 2.694628 GCAGGAATGACAATGGGCAATA 59.305 45.455 0.00 0.00 0.00 1.90
215 216 3.243636 GCAGGAATGACAATGGGCAATAG 60.244 47.826 0.00 0.00 0.00 1.73
216 217 3.319972 CAGGAATGACAATGGGCAATAGG 59.680 47.826 0.00 0.00 0.00 2.57
217 218 2.629617 GGAATGACAATGGGCAATAGGG 59.370 50.000 0.00 0.00 0.00 3.53
218 219 3.299503 GAATGACAATGGGCAATAGGGT 58.700 45.455 0.00 0.00 0.00 4.34
219 220 2.917713 TGACAATGGGCAATAGGGTT 57.082 45.000 0.00 0.00 0.00 4.11
220 221 3.182887 TGACAATGGGCAATAGGGTTT 57.817 42.857 0.00 0.00 0.00 3.27
221 222 3.515562 TGACAATGGGCAATAGGGTTTT 58.484 40.909 0.00 0.00 0.00 2.43
222 223 3.260380 TGACAATGGGCAATAGGGTTTTG 59.740 43.478 0.00 0.00 0.00 2.44
223 224 2.027285 ACAATGGGCAATAGGGTTTTGC 60.027 45.455 0.00 0.00 46.82 3.68
228 229 0.536724 GCAATAGGGTTTTGCCTGGG 59.463 55.000 0.00 0.00 42.84 4.45
229 230 1.194218 CAATAGGGTTTTGCCTGGGG 58.806 55.000 0.00 0.00 37.43 4.96
230 231 0.042581 AATAGGGTTTTGCCTGGGGG 59.957 55.000 0.00 0.00 37.43 5.40
231 232 1.153041 ATAGGGTTTTGCCTGGGGGT 61.153 55.000 0.00 0.00 37.43 4.95
232 233 2.087857 TAGGGTTTTGCCTGGGGGTG 62.088 60.000 0.00 0.00 37.43 4.61
233 234 2.200092 GGTTTTGCCTGGGGGTGA 59.800 61.111 0.00 0.00 34.45 4.02
234 235 1.229177 GGTTTTGCCTGGGGGTGAT 60.229 57.895 0.00 0.00 34.45 3.06
235 236 1.543944 GGTTTTGCCTGGGGGTGATG 61.544 60.000 0.00 0.00 34.45 3.07
236 237 1.229145 TTTTGCCTGGGGGTGATGG 60.229 57.895 0.00 0.00 34.45 3.51
237 238 3.903281 TTTGCCTGGGGGTGATGGC 62.903 63.158 0.00 0.00 45.10 4.40
239 240 4.828296 GCCTGGGGGTGATGGCTG 62.828 72.222 0.00 0.00 41.92 4.85
240 241 4.133373 CCTGGGGGTGATGGCTGG 62.133 72.222 0.00 0.00 0.00 4.85
241 242 4.133373 CTGGGGGTGATGGCTGGG 62.133 72.222 0.00 0.00 0.00 4.45
245 246 4.864334 GGGTGATGGCTGGGCGAG 62.864 72.222 0.00 0.00 0.00 5.03
254 255 3.434319 CTGGGCGAGCGCAATGTT 61.434 61.111 17.16 0.00 44.11 2.71
255 256 2.981560 CTGGGCGAGCGCAATGTTT 61.982 57.895 17.16 0.00 44.11 2.83
256 257 2.258286 GGGCGAGCGCAATGTTTT 59.742 55.556 17.16 0.00 44.11 2.43
257 258 1.372872 GGGCGAGCGCAATGTTTTT 60.373 52.632 17.16 0.00 44.11 1.94
566 567 2.298411 GGTTATACCGAAGCGTTCCA 57.702 50.000 0.00 0.00 0.00 3.53
567 568 2.199236 GGTTATACCGAAGCGTTCCAG 58.801 52.381 0.00 0.00 0.00 3.86
568 569 1.591619 GTTATACCGAAGCGTTCCAGC 59.408 52.381 0.00 0.00 37.41 4.85
569 570 0.818938 TATACCGAAGCGTTCCAGCA 59.181 50.000 0.00 0.00 40.15 4.41
570 571 0.460284 ATACCGAAGCGTTCCAGCAG 60.460 55.000 0.00 0.00 40.15 4.24
571 572 3.793144 CCGAAGCGTTCCAGCAGC 61.793 66.667 0.00 0.00 40.15 5.25
572 573 3.043713 CGAAGCGTTCCAGCAGCA 61.044 61.111 0.00 0.00 40.15 4.41
573 574 2.866028 GAAGCGTTCCAGCAGCAG 59.134 61.111 0.00 0.00 40.15 4.24
574 575 2.670934 AAGCGTTCCAGCAGCAGG 60.671 61.111 0.00 0.00 40.15 4.85
575 576 3.482232 AAGCGTTCCAGCAGCAGGT 62.482 57.895 3.35 0.00 40.15 4.00
576 577 2.965716 AAGCGTTCCAGCAGCAGGTT 62.966 55.000 3.35 0.00 40.15 3.50
577 578 2.970974 GCGTTCCAGCAGCAGGTTC 61.971 63.158 3.35 0.00 37.05 3.62
578 579 2.671177 CGTTCCAGCAGCAGGTTCG 61.671 63.158 3.35 6.40 0.00 3.95
579 580 1.598130 GTTCCAGCAGCAGGTTCGT 60.598 57.895 3.35 0.00 0.00 3.85
580 581 1.597854 TTCCAGCAGCAGGTTCGTG 60.598 57.895 3.35 0.00 0.00 4.35
581 582 3.052082 CCAGCAGCAGGTTCGTGG 61.052 66.667 0.00 0.00 0.00 4.94
582 583 2.031012 CAGCAGCAGGTTCGTGGA 59.969 61.111 0.00 0.00 0.00 4.02
583 584 1.376424 CAGCAGCAGGTTCGTGGAT 60.376 57.895 0.00 0.00 0.00 3.41
584 585 1.376424 AGCAGCAGGTTCGTGGATG 60.376 57.895 0.00 0.00 0.00 3.51
585 586 1.375908 GCAGCAGGTTCGTGGATGA 60.376 57.895 0.00 0.00 0.00 2.92
586 587 1.639298 GCAGCAGGTTCGTGGATGAC 61.639 60.000 0.00 0.00 0.00 3.06
587 588 0.036952 CAGCAGGTTCGTGGATGACT 60.037 55.000 0.00 0.00 0.00 3.41
588 589 0.247736 AGCAGGTTCGTGGATGACTC 59.752 55.000 0.00 0.00 0.00 3.36
589 590 1.078759 GCAGGTTCGTGGATGACTCG 61.079 60.000 0.00 0.00 0.00 4.18
590 591 0.243907 CAGGTTCGTGGATGACTCGT 59.756 55.000 0.00 0.00 0.00 4.18
591 592 0.243907 AGGTTCGTGGATGACTCGTG 59.756 55.000 0.00 0.00 0.00 4.35
592 593 0.242825 GGTTCGTGGATGACTCGTGA 59.757 55.000 0.00 0.00 0.00 4.35
593 594 1.618861 GTTCGTGGATGACTCGTGAG 58.381 55.000 0.00 0.00 0.00 3.51
649 650 1.338864 CCTCACTCAGCTGAACATGCT 60.339 52.381 18.85 0.00 42.06 3.79
662 663 5.814705 GCTGAACATGCTAATCTACTTGACT 59.185 40.000 0.00 0.00 0.00 3.41
858 869 4.141390 GGCCCTTCTTCTCCTTCAATCATA 60.141 45.833 0.00 0.00 0.00 2.15
866 877 7.331026 TCTTCTCCTTCAATCATATGAACGTT 58.669 34.615 9.99 0.00 35.55 3.99
888 899 1.745232 TGATACGCTCCGCCATTTTT 58.255 45.000 0.00 0.00 0.00 1.94
920 932 1.151668 CACTTGTTCTGCCTTCTCCG 58.848 55.000 0.00 0.00 0.00 4.63
925 937 1.270305 TGTTCTGCCTTCTCCGAACAG 60.270 52.381 0.00 0.00 40.33 3.16
963 976 3.616821 GCGTAACACATTACTCATGCTCA 59.383 43.478 0.00 0.00 38.89 4.26
1043 1060 2.577105 TCCTACTTCTCCTCGTCTCCTT 59.423 50.000 0.00 0.00 0.00 3.36
1044 1061 2.685897 CCTACTTCTCCTCGTCTCCTTG 59.314 54.545 0.00 0.00 0.00 3.61
1094 1120 1.202463 ACATGATACTCTCACGGCTGC 60.202 52.381 0.00 0.00 36.48 5.25
1257 1328 7.162761 TCAATAAGATTCCGGTTTTCACTACA 58.837 34.615 0.00 0.00 0.00 2.74
1394 1489 1.898472 ACTCTGGTCCACTCACATCAG 59.102 52.381 0.00 0.00 0.00 2.90
1461 1574 2.623878 TGAACAGCGGAAACCTTGTA 57.376 45.000 0.00 0.00 0.00 2.41
1758 1907 5.984233 TGATGGTTCTAAATTCGGATTCG 57.016 39.130 0.00 0.00 37.82 3.34
1917 2072 1.433053 CCGAACAGTCGTGGCAAACA 61.433 55.000 0.00 0.00 46.21 2.83
2326 2502 7.434307 GTGTAAATCTGAATGATGGCATTGAAG 59.566 37.037 0.00 0.00 44.47 3.02
2466 2758 6.771076 TGTGTTAATAATGCTCGTGATGTTC 58.229 36.000 0.00 0.00 0.00 3.18
2862 3179 4.993029 TTTTGGTGTGTTAAGTTGGAGG 57.007 40.909 0.00 0.00 0.00 4.30
3236 3590 2.035449 TCCCTGTACAAGTCGTCAACAG 59.965 50.000 0.00 0.00 37.81 3.16
3396 3750 0.034337 TGGTACGTGTTCTTGAGGGC 59.966 55.000 0.00 0.00 0.00 5.19
3575 3949 7.399245 AAAGAAAGGCAAACTTGTAGTTACA 57.601 32.000 0.00 0.00 37.47 2.41
3587 3961 5.758784 ACTTGTAGTTACAAAACTGCCTCTC 59.241 40.000 6.23 0.00 45.63 3.20
3616 3990 6.952773 TCAATGGCCAATTATAGTAACCAC 57.047 37.500 10.96 0.00 0.00 4.16
3635 4009 1.429148 CGCATTGTAGGGGCGTCTTC 61.429 60.000 0.00 0.00 45.27 2.87
3646 4020 2.089349 GCGTCTTCGTCAGCAGGAC 61.089 63.158 0.00 0.00 43.36 3.85
3672 4046 3.164268 ACACCAAGCTATTTCCATTGCA 58.836 40.909 0.00 0.00 33.92 4.08
3675 4049 2.456989 CAAGCTATTTCCATTGCAGCG 58.543 47.619 0.00 0.00 37.32 5.18
3676 4050 1.027357 AGCTATTTCCATTGCAGCGG 58.973 50.000 0.00 0.00 37.32 5.52
3677 4051 0.595825 GCTATTTCCATTGCAGCGGC 60.596 55.000 0.31 0.31 41.68 6.53
3678 4052 0.031178 CTATTTCCATTGCAGCGGCC 59.969 55.000 6.32 0.00 40.13 6.13
3685 4059 3.899981 ATTGCAGCGGCCTCAACGA 62.900 57.895 6.32 0.00 40.13 3.85
3746 4120 2.708861 TGGTTTCTGAAGTAGCCAAGGA 59.291 45.455 0.00 0.00 0.00 3.36
3757 4131 0.037447 AGCCAAGGAGCTGAACCTTC 59.963 55.000 2.23 0.00 44.65 3.46
3759 4133 1.615384 GCCAAGGAGCTGAACCTTCAT 60.615 52.381 2.23 0.00 44.65 2.57
3770 4144 6.458210 AGCTGAACCTTCATAAACCAAATTG 58.542 36.000 0.00 0.00 36.46 2.32
3778 4152 8.207545 ACCTTCATAAACCAAATTGCTTAACAA 58.792 29.630 0.00 0.00 44.01 2.83
3795 4169 7.930865 TGCTTAACAAATAATCAAGTTTTGGCT 59.069 29.630 0.00 0.00 35.23 4.75
3797 4171 8.600449 TTAACAAATAATCAAGTTTTGGCTGG 57.400 30.769 0.00 0.00 35.23 4.85
3814 4188 1.006922 GGAGCAGGCAAGCAACAAC 60.007 57.895 4.78 0.00 36.85 3.32
3815 4189 1.370900 GAGCAGGCAAGCAACAACG 60.371 57.895 4.78 0.00 36.85 4.10
3817 4191 1.065600 GCAGGCAAGCAACAACGAA 59.934 52.632 0.00 0.00 0.00 3.85
3830 4204 1.148310 CAACGAAGCGTCCACTGAAT 58.852 50.000 0.00 0.00 39.99 2.57
3871 4245 5.755375 AGACCTGCACTTAATACATTCATCG 59.245 40.000 0.00 0.00 0.00 3.84
3876 4250 6.054941 TGCACTTAATACATTCATCGACCAT 58.945 36.000 0.00 0.00 0.00 3.55
3915 4289 4.335874 GCTAGAGTCTTCAACATCCGTAGA 59.664 45.833 0.00 0.00 0.00 2.59
3919 4293 7.406031 AGAGTCTTCAACATCCGTAGAATAA 57.594 36.000 0.00 0.00 0.00 1.40
3941 4315 1.797046 CAGCAAGATAGCACATAGGCG 59.203 52.381 0.00 0.00 39.27 5.52
3942 4316 1.688735 AGCAAGATAGCACATAGGCGA 59.311 47.619 0.00 0.00 39.27 5.54
3943 4317 2.064762 GCAAGATAGCACATAGGCGAG 58.935 52.381 0.00 0.00 39.27 5.03
3944 4318 2.064762 CAAGATAGCACATAGGCGAGC 58.935 52.381 0.00 0.00 39.27 5.03
3945 4319 1.626686 AGATAGCACATAGGCGAGCT 58.373 50.000 0.00 0.00 40.92 4.09
3984 4358 9.727627 TTTTAACAAATTTTCATGTTTGATGGC 57.272 25.926 12.08 0.00 40.14 4.40
3985 4359 5.945466 ACAAATTTTCATGTTTGATGGCC 57.055 34.783 12.08 0.00 38.39 5.36
3986 4360 4.451774 ACAAATTTTCATGTTTGATGGCCG 59.548 37.500 12.08 0.00 38.39 6.13
3987 4361 4.533919 AATTTTCATGTTTGATGGCCGA 57.466 36.364 0.00 0.00 0.00 5.54
3988 4362 4.533919 ATTTTCATGTTTGATGGCCGAA 57.466 36.364 0.00 0.00 0.00 4.30
3989 4363 3.574284 TTTCATGTTTGATGGCCGAAG 57.426 42.857 0.00 0.00 0.00 3.79
3990 4364 9.414312 CAAATTTTCATGTTTGATGGCCGAAGG 62.414 40.741 0.00 0.00 43.52 3.46
4028 4402 9.801873 TTAAATAAATGAACAGCCTAAGCAATC 57.198 29.630 0.00 0.00 43.56 2.67
4029 4403 7.651027 AATAAATGAACAGCCTAAGCAATCT 57.349 32.000 0.00 0.00 43.56 2.40
4030 4404 4.978083 AATGAACAGCCTAAGCAATCTG 57.022 40.909 0.00 0.00 43.56 2.90
4032 4406 2.019984 GAACAGCCTAAGCAATCTGGG 58.980 52.381 0.00 0.00 43.56 4.45
4033 4407 1.289160 ACAGCCTAAGCAATCTGGGA 58.711 50.000 0.00 0.00 43.56 4.37
4034 4408 1.849039 ACAGCCTAAGCAATCTGGGAT 59.151 47.619 0.00 0.00 43.56 3.85
4036 4410 3.459598 ACAGCCTAAGCAATCTGGGATTA 59.540 43.478 0.00 0.00 43.56 1.75
4037 4411 3.817647 CAGCCTAAGCAATCTGGGATTAC 59.182 47.826 0.00 0.00 43.56 1.89
4038 4412 3.718956 AGCCTAAGCAATCTGGGATTACT 59.281 43.478 0.00 0.00 43.56 2.24
4039 4413 3.817647 GCCTAAGCAATCTGGGATTACTG 59.182 47.826 0.00 0.00 39.53 2.74
4040 4414 4.687219 GCCTAAGCAATCTGGGATTACTGT 60.687 45.833 0.00 0.00 39.53 3.55
4041 4415 5.440610 CCTAAGCAATCTGGGATTACTGTT 58.559 41.667 0.00 0.00 0.00 3.16
4042 4416 5.888161 CCTAAGCAATCTGGGATTACTGTTT 59.112 40.000 0.00 0.00 0.00 2.83
4044 4418 4.922206 AGCAATCTGGGATTACTGTTTCA 58.078 39.130 0.00 0.00 0.00 2.69
4045 4419 4.702131 AGCAATCTGGGATTACTGTTTCAC 59.298 41.667 0.00 0.00 0.00 3.18
4046 4420 4.702131 GCAATCTGGGATTACTGTTTCACT 59.298 41.667 0.00 0.00 0.00 3.41
4048 4422 6.294731 GCAATCTGGGATTACTGTTTCACTTT 60.295 38.462 0.00 0.00 0.00 2.66
4049 4423 7.308435 CAATCTGGGATTACTGTTTCACTTTC 58.692 38.462 0.00 0.00 0.00 2.62
4051 4425 5.763204 TCTGGGATTACTGTTTCACTTTCAC 59.237 40.000 0.00 0.00 0.00 3.18
4052 4426 5.690865 TGGGATTACTGTTTCACTTTCACT 58.309 37.500 0.00 0.00 0.00 3.41
4053 4427 5.530915 TGGGATTACTGTTTCACTTTCACTG 59.469 40.000 0.00 0.00 0.00 3.66
4054 4428 5.452777 GGATTACTGTTTCACTTTCACTGC 58.547 41.667 0.00 0.00 0.00 4.40
4055 4429 5.008613 GGATTACTGTTTCACTTTCACTGCA 59.991 40.000 0.00 0.00 0.00 4.41
4056 4430 3.764885 ACTGTTTCACTTTCACTGCAC 57.235 42.857 0.00 0.00 0.00 4.57
4057 4431 3.347216 ACTGTTTCACTTTCACTGCACT 58.653 40.909 0.00 0.00 0.00 4.40
4058 4432 3.127548 ACTGTTTCACTTTCACTGCACTG 59.872 43.478 0.00 0.00 0.00 3.66
4059 4433 2.159393 TGTTTCACTTTCACTGCACTGC 60.159 45.455 0.00 0.00 0.00 4.40
4060 4434 0.657312 TTCACTTTCACTGCACTGCG 59.343 50.000 0.00 0.00 0.00 5.18
4061 4435 0.179086 TCACTTTCACTGCACTGCGA 60.179 50.000 0.00 0.00 0.00 5.10
4062 4436 0.041839 CACTTTCACTGCACTGCGAC 60.042 55.000 0.00 0.00 0.00 5.19
4063 4437 0.461870 ACTTTCACTGCACTGCGACA 60.462 50.000 0.00 0.00 0.00 4.35
4064 4438 0.657312 CTTTCACTGCACTGCGACAA 59.343 50.000 0.00 0.00 0.00 3.18
4065 4439 1.265095 CTTTCACTGCACTGCGACAAT 59.735 47.619 0.00 0.00 0.00 2.71
4066 4440 0.587768 TTCACTGCACTGCGACAATG 59.412 50.000 0.00 0.00 0.00 2.82
4067 4441 1.208358 CACTGCACTGCGACAATGG 59.792 57.895 0.00 0.00 0.00 3.16
4068 4442 1.071299 ACTGCACTGCGACAATGGA 59.929 52.632 0.00 0.00 0.00 3.41
4069 4443 1.230635 ACTGCACTGCGACAATGGAC 61.231 55.000 0.00 0.00 0.00 4.02
4070 4444 0.952497 CTGCACTGCGACAATGGACT 60.952 55.000 0.00 0.00 0.00 3.85
4071 4445 1.229975 TGCACTGCGACAATGGACTG 61.230 55.000 0.00 0.00 0.00 3.51
4072 4446 1.230635 GCACTGCGACAATGGACTGT 61.231 55.000 0.00 0.00 0.00 3.55
4073 4447 0.514255 CACTGCGACAATGGACTGTG 59.486 55.000 0.00 0.00 0.00 3.66
4074 4448 0.392706 ACTGCGACAATGGACTGTGA 59.607 50.000 0.00 0.00 0.00 3.58
4075 4449 1.073964 CTGCGACAATGGACTGTGAG 58.926 55.000 0.00 0.00 0.00 3.51
4076 4450 0.392706 TGCGACAATGGACTGTGAGT 59.607 50.000 0.00 0.00 0.00 3.41
4077 4451 0.792640 GCGACAATGGACTGTGAGTG 59.207 55.000 0.00 0.00 0.00 3.51
4078 4452 1.432514 CGACAATGGACTGTGAGTGG 58.567 55.000 0.00 0.00 0.00 4.00
4079 4453 1.270305 CGACAATGGACTGTGAGTGGT 60.270 52.381 0.00 0.00 0.00 4.16
4080 4454 2.417719 GACAATGGACTGTGAGTGGTC 58.582 52.381 0.00 0.00 0.00 4.02
4081 4455 1.270305 ACAATGGACTGTGAGTGGTCG 60.270 52.381 0.00 0.00 33.70 4.79
4082 4456 1.048601 AATGGACTGTGAGTGGTCGT 58.951 50.000 0.00 0.00 33.70 4.34
4083 4457 0.603569 ATGGACTGTGAGTGGTCGTC 59.396 55.000 0.00 0.00 33.70 4.20
4084 4458 1.081376 GGACTGTGAGTGGTCGTCG 60.081 63.158 0.00 0.00 33.70 5.12
4085 4459 1.081376 GACTGTGAGTGGTCGTCGG 60.081 63.158 0.00 0.00 0.00 4.79
4086 4460 1.793134 GACTGTGAGTGGTCGTCGGT 61.793 60.000 0.00 0.00 0.00 4.69
4087 4461 1.371758 CTGTGAGTGGTCGTCGGTG 60.372 63.158 0.00 0.00 0.00 4.94
4088 4462 2.071844 CTGTGAGTGGTCGTCGGTGT 62.072 60.000 0.00 0.00 0.00 4.16
4089 4463 1.066918 GTGAGTGGTCGTCGGTGTT 59.933 57.895 0.00 0.00 0.00 3.32
4090 4464 0.529119 GTGAGTGGTCGTCGGTGTTT 60.529 55.000 0.00 0.00 0.00 2.83
4091 4465 0.249155 TGAGTGGTCGTCGGTGTTTC 60.249 55.000 0.00 0.00 0.00 2.78
4092 4466 0.249155 GAGTGGTCGTCGGTGTTTCA 60.249 55.000 0.00 0.00 0.00 2.69
4093 4467 0.391597 AGTGGTCGTCGGTGTTTCAT 59.608 50.000 0.00 0.00 0.00 2.57
4094 4468 0.788391 GTGGTCGTCGGTGTTTCATC 59.212 55.000 0.00 0.00 0.00 2.92
4095 4469 0.677288 TGGTCGTCGGTGTTTCATCT 59.323 50.000 0.00 0.00 0.00 2.90
4096 4470 1.068474 GGTCGTCGGTGTTTCATCTG 58.932 55.000 0.00 0.00 0.00 2.90
4097 4471 1.336517 GGTCGTCGGTGTTTCATCTGA 60.337 52.381 0.00 0.00 0.00 3.27
4098 4472 2.607187 GTCGTCGGTGTTTCATCTGAT 58.393 47.619 0.00 0.00 0.00 2.90
4099 4473 2.345641 GTCGTCGGTGTTTCATCTGATG 59.654 50.000 11.42 11.42 0.00 3.07
4100 4474 1.061131 CGTCGGTGTTTCATCTGATGC 59.939 52.381 12.78 0.08 0.00 3.91
4101 4475 2.076100 GTCGGTGTTTCATCTGATGCA 58.924 47.619 12.78 0.00 0.00 3.96
4102 4476 2.679837 GTCGGTGTTTCATCTGATGCAT 59.320 45.455 12.78 0.00 0.00 3.96
4103 4477 3.871006 GTCGGTGTTTCATCTGATGCATA 59.129 43.478 12.78 0.00 0.00 3.14
4104 4478 3.871006 TCGGTGTTTCATCTGATGCATAC 59.129 43.478 12.78 9.65 0.00 2.39
4105 4479 3.873361 CGGTGTTTCATCTGATGCATACT 59.127 43.478 12.78 0.00 0.00 2.12
4106 4480 5.049828 CGGTGTTTCATCTGATGCATACTA 58.950 41.667 12.78 0.00 0.00 1.82
4107 4481 5.523552 CGGTGTTTCATCTGATGCATACTAA 59.476 40.000 12.78 0.00 0.00 2.24
4108 4482 6.510157 CGGTGTTTCATCTGATGCATACTAAC 60.510 42.308 12.78 9.59 0.00 2.34
4109 4483 6.540189 GGTGTTTCATCTGATGCATACTAACT 59.460 38.462 12.78 0.00 0.00 2.24
4110 4484 7.710907 GGTGTTTCATCTGATGCATACTAACTA 59.289 37.037 12.78 0.00 0.00 2.24
4111 4485 9.098355 GTGTTTCATCTGATGCATACTAACTAA 57.902 33.333 12.78 0.00 0.00 2.24
4112 4486 9.098355 TGTTTCATCTGATGCATACTAACTAAC 57.902 33.333 12.78 1.14 0.00 2.34
4113 4487 8.552034 GTTTCATCTGATGCATACTAACTAACC 58.448 37.037 12.78 0.00 0.00 2.85
4114 4488 6.447162 TCATCTGATGCATACTAACTAACCG 58.553 40.000 12.78 0.00 0.00 4.44
4115 4489 4.617959 TCTGATGCATACTAACTAACCGC 58.382 43.478 0.00 0.00 0.00 5.68
4116 4490 3.377439 TGATGCATACTAACTAACCGCG 58.623 45.455 0.00 0.00 0.00 6.46
4117 4491 3.067040 TGATGCATACTAACTAACCGCGA 59.933 43.478 8.23 0.00 0.00 5.87
4118 4492 3.720949 TGCATACTAACTAACCGCGAT 57.279 42.857 8.23 0.00 0.00 4.58
4119 4493 3.377439 TGCATACTAACTAACCGCGATG 58.623 45.455 8.23 0.00 0.00 3.84
4120 4494 2.729882 GCATACTAACTAACCGCGATGG 59.270 50.000 8.23 0.00 46.41 3.51
4121 4495 3.551454 GCATACTAACTAACCGCGATGGA 60.551 47.826 8.23 0.00 42.00 3.41
4122 4496 2.865343 ACTAACTAACCGCGATGGAG 57.135 50.000 8.23 1.17 42.00 3.86
4123 4497 1.407979 ACTAACTAACCGCGATGGAGG 59.592 52.381 8.23 0.00 42.00 4.30
4124 4498 1.679680 CTAACTAACCGCGATGGAGGA 59.320 52.381 8.23 0.00 42.00 3.71
4125 4499 0.175073 AACTAACCGCGATGGAGGAC 59.825 55.000 8.23 0.00 42.00 3.85
4126 4500 1.299165 CTAACCGCGATGGAGGACG 60.299 63.158 8.23 0.00 42.00 4.79
4127 4501 2.001361 CTAACCGCGATGGAGGACGT 62.001 60.000 8.23 0.00 42.00 4.34
4128 4502 1.996786 TAACCGCGATGGAGGACGTC 61.997 60.000 8.23 7.13 42.00 4.34
4133 4507 4.924924 GATGGAGGACGTCGATCG 57.075 61.111 9.36 9.36 46.00 3.69
4134 4508 1.283181 GATGGAGGACGTCGATCGG 59.717 63.158 16.41 2.12 44.69 4.18
4142 4516 3.025866 ACGTCGATCGGCAGTTAAC 57.974 52.632 21.12 5.65 44.69 2.01
4143 4517 0.241749 ACGTCGATCGGCAGTTAACA 59.758 50.000 21.12 0.00 44.69 2.41
4144 4518 0.914551 CGTCGATCGGCAGTTAACAG 59.085 55.000 21.12 0.17 35.71 3.16
4145 4519 1.466866 CGTCGATCGGCAGTTAACAGA 60.467 52.381 21.12 2.20 35.71 3.41
4146 4520 2.602878 GTCGATCGGCAGTTAACAGAA 58.397 47.619 16.20 0.00 0.00 3.02
4147 4521 2.344741 GTCGATCGGCAGTTAACAGAAC 59.655 50.000 16.20 0.00 0.00 3.01
4148 4522 1.659098 CGATCGGCAGTTAACAGAACC 59.341 52.381 7.38 2.49 0.00 3.62
4149 4523 1.659098 GATCGGCAGTTAACAGAACCG 59.341 52.381 17.38 17.38 41.92 4.44
4150 4524 0.320073 TCGGCAGTTAACAGAACCGG 60.320 55.000 20.91 0.00 40.95 5.28
4151 4525 1.873863 GGCAGTTAACAGAACCGGC 59.126 57.895 8.61 0.00 0.00 6.13
4152 4526 1.495951 GCAGTTAACAGAACCGGCG 59.504 57.895 8.61 0.00 0.00 6.46
4153 4527 1.226030 GCAGTTAACAGAACCGGCGT 61.226 55.000 8.61 0.00 0.00 5.68
4154 4528 0.788391 CAGTTAACAGAACCGGCGTC 59.212 55.000 8.61 0.00 0.00 5.19
4155 4529 0.665369 AGTTAACAGAACCGGCGTCG 60.665 55.000 0.29 0.29 0.00 5.12
4166 4540 3.419759 GGCGTCGGATGCACGTTT 61.420 61.111 22.56 0.00 39.54 3.60
4167 4541 2.202171 GCGTCGGATGCACGTTTG 60.202 61.111 17.00 0.00 39.54 2.93
4176 4550 2.556287 GCACGTTTGCCGGAGAAG 59.444 61.111 5.05 0.00 43.66 2.85
4177 4551 1.959226 GCACGTTTGCCGGAGAAGA 60.959 57.895 5.05 0.00 43.66 2.87
4178 4552 1.298859 GCACGTTTGCCGGAGAAGAT 61.299 55.000 5.05 0.00 43.66 2.40
4179 4553 0.443869 CACGTTTGCCGGAGAAGATG 59.556 55.000 5.05 0.00 42.24 2.90
4180 4554 0.034896 ACGTTTGCCGGAGAAGATGT 59.965 50.000 5.05 0.00 42.24 3.06
4181 4555 0.443869 CGTTTGCCGGAGAAGATGTG 59.556 55.000 5.05 0.00 0.00 3.21
4182 4556 1.808411 GTTTGCCGGAGAAGATGTGA 58.192 50.000 5.05 0.00 0.00 3.58
4183 4557 1.464997 GTTTGCCGGAGAAGATGTGAC 59.535 52.381 5.05 0.00 0.00 3.67
4184 4558 0.389817 TTGCCGGAGAAGATGTGACG 60.390 55.000 5.05 0.00 0.00 4.35
4185 4559 1.248101 TGCCGGAGAAGATGTGACGA 61.248 55.000 5.05 0.00 0.00 4.20
4186 4560 0.103208 GCCGGAGAAGATGTGACGAT 59.897 55.000 5.05 0.00 0.00 3.73
4187 4561 1.866063 GCCGGAGAAGATGTGACGATC 60.866 57.143 5.05 0.00 0.00 3.69
4188 4562 1.269309 CCGGAGAAGATGTGACGATCC 60.269 57.143 0.00 0.00 0.00 3.36
4189 4563 1.678627 CGGAGAAGATGTGACGATCCT 59.321 52.381 0.00 0.00 0.00 3.24
4190 4564 2.099921 CGGAGAAGATGTGACGATCCTT 59.900 50.000 0.00 0.00 0.00 3.36
4191 4565 3.712187 GGAGAAGATGTGACGATCCTTC 58.288 50.000 0.00 0.00 0.00 3.46
4214 4588 5.097529 CCAAAGCATACAACTTGCATACTG 58.902 41.667 0.00 0.00 42.62 2.74
4268 4642 1.784525 AGCTGCTCACTTGAACGTAC 58.215 50.000 0.00 0.00 0.00 3.67
4269 4643 0.435008 GCTGCTCACTTGAACGTACG 59.565 55.000 15.01 15.01 0.00 3.67
4280 4654 3.469899 TGAACGTACGTAGCGTATTGT 57.530 42.857 23.12 1.61 44.12 2.71
4381 4755 3.755628 GCACCTACCGGCGACTGA 61.756 66.667 9.30 0.00 0.00 3.41
4409 4787 3.270877 GTCCAGTTGCACGGAATTCTAT 58.729 45.455 5.23 0.00 31.67 1.98
4410 4788 3.063997 GTCCAGTTGCACGGAATTCTATG 59.936 47.826 5.23 5.35 31.67 2.23
4416 4794 5.415701 AGTTGCACGGAATTCTATGATGTTT 59.584 36.000 5.23 0.00 0.00 2.83
4468 4846 5.554822 AACGTACTTGCTTTGAAAGAACA 57.445 34.783 9.48 0.00 0.00 3.18
4469 4847 4.905269 ACGTACTTGCTTTGAAAGAACAC 58.095 39.130 9.48 0.00 0.00 3.32
4470 4848 4.393680 ACGTACTTGCTTTGAAAGAACACA 59.606 37.500 9.48 0.00 0.00 3.72
4471 4849 5.106475 ACGTACTTGCTTTGAAAGAACACAA 60.106 36.000 9.48 2.58 0.00 3.33
4472 4850 5.227184 CGTACTTGCTTTGAAAGAACACAAC 59.773 40.000 9.48 0.00 0.00 3.32
4473 4851 5.391312 ACTTGCTTTGAAAGAACACAACT 57.609 34.783 9.48 0.00 0.00 3.16
4474 4852 6.509418 ACTTGCTTTGAAAGAACACAACTA 57.491 33.333 9.48 0.00 0.00 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 2.266055 GGCCAACTGTCCTCTCCG 59.734 66.667 0.00 0.00 0.00 4.63
4 5 2.266055 CCGGCCAACTGTCCTCTC 59.734 66.667 2.24 0.00 0.00 3.20
5 6 2.526873 ACCGGCCAACTGTCCTCT 60.527 61.111 0.00 0.00 0.00 3.69
6 7 2.358737 CACCGGCCAACTGTCCTC 60.359 66.667 0.00 0.00 0.00 3.71
7 8 2.847234 TCACCGGCCAACTGTCCT 60.847 61.111 0.00 0.00 0.00 3.85
8 9 2.668550 GTCACCGGCCAACTGTCC 60.669 66.667 0.00 0.00 0.00 4.02
9 10 1.098712 TTTGTCACCGGCCAACTGTC 61.099 55.000 0.00 0.00 0.00 3.51
10 11 1.077357 TTTGTCACCGGCCAACTGT 60.077 52.632 0.00 0.00 0.00 3.55
11 12 1.654220 CTTTGTCACCGGCCAACTG 59.346 57.895 0.00 0.00 0.00 3.16
12 13 1.528309 CCTTTGTCACCGGCCAACT 60.528 57.895 0.00 0.00 0.00 3.16
13 14 1.826487 ACCTTTGTCACCGGCCAAC 60.826 57.895 0.00 0.00 0.00 3.77
14 15 1.826054 CACCTTTGTCACCGGCCAA 60.826 57.895 0.00 0.00 0.00 4.52
15 16 2.203280 CACCTTTGTCACCGGCCA 60.203 61.111 0.00 0.00 0.00 5.36
16 17 2.203294 ACACCTTTGTCACCGGCC 60.203 61.111 0.00 0.00 0.00 6.13
17 18 1.507141 CTCACACCTTTGTCACCGGC 61.507 60.000 0.00 0.00 31.66 6.13
18 19 0.884704 CCTCACACCTTTGTCACCGG 60.885 60.000 0.00 0.00 31.66 5.28
19 20 0.884704 CCCTCACACCTTTGTCACCG 60.885 60.000 0.00 0.00 31.66 4.94
20 21 1.172812 GCCCTCACACCTTTGTCACC 61.173 60.000 0.00 0.00 31.66 4.02
21 22 1.507141 CGCCCTCACACCTTTGTCAC 61.507 60.000 0.00 0.00 31.66 3.67
22 23 1.227823 CGCCCTCACACCTTTGTCA 60.228 57.895 0.00 0.00 31.66 3.58
23 24 1.070786 TCGCCCTCACACCTTTGTC 59.929 57.895 0.00 0.00 31.66 3.18
24 25 1.227853 GTCGCCCTCACACCTTTGT 60.228 57.895 0.00 0.00 35.84 2.83
25 26 1.966451 GGTCGCCCTCACACCTTTG 60.966 63.158 0.00 0.00 0.00 2.77
26 27 2.397413 CTGGTCGCCCTCACACCTTT 62.397 60.000 0.00 0.00 0.00 3.11
27 28 2.847234 TGGTCGCCCTCACACCTT 60.847 61.111 0.00 0.00 0.00 3.50
28 29 3.314331 CTGGTCGCCCTCACACCT 61.314 66.667 0.00 0.00 0.00 4.00
29 30 4.394712 CCTGGTCGCCCTCACACC 62.395 72.222 0.00 0.00 0.00 4.16
30 31 3.311110 TCCTGGTCGCCCTCACAC 61.311 66.667 0.00 0.00 0.00 3.82
31 32 3.311110 GTCCTGGTCGCCCTCACA 61.311 66.667 0.00 0.00 0.00 3.58
32 33 4.436998 CGTCCTGGTCGCCCTCAC 62.437 72.222 0.00 0.00 0.00 3.51
33 34 4.988716 ACGTCCTGGTCGCCCTCA 62.989 66.667 13.13 0.00 0.00 3.86
34 35 4.436998 CACGTCCTGGTCGCCCTC 62.437 72.222 13.13 0.00 0.00 4.30
35 36 4.988716 TCACGTCCTGGTCGCCCT 62.989 66.667 13.13 0.00 0.00 5.19
36 37 4.436998 CTCACGTCCTGGTCGCCC 62.437 72.222 13.13 0.00 0.00 6.13
37 38 4.436998 CCTCACGTCCTGGTCGCC 62.437 72.222 13.13 0.00 0.00 5.54
38 39 4.436998 CCCTCACGTCCTGGTCGC 62.437 72.222 13.13 0.00 0.00 5.19
39 40 1.654954 CTACCCTCACGTCCTGGTCG 61.655 65.000 11.71 11.71 32.27 4.79
40 41 0.611340 ACTACCCTCACGTCCTGGTC 60.611 60.000 2.86 0.00 32.27 4.02
41 42 0.898789 CACTACCCTCACGTCCTGGT 60.899 60.000 4.93 4.93 34.85 4.00
42 43 0.611062 TCACTACCCTCACGTCCTGG 60.611 60.000 0.00 0.00 0.00 4.45
43 44 1.135139 CATCACTACCCTCACGTCCTG 59.865 57.143 0.00 0.00 0.00 3.86
44 45 1.005569 TCATCACTACCCTCACGTCCT 59.994 52.381 0.00 0.00 0.00 3.85
45 46 1.134560 GTCATCACTACCCTCACGTCC 59.865 57.143 0.00 0.00 0.00 4.79
46 47 1.202154 CGTCATCACTACCCTCACGTC 60.202 57.143 0.00 0.00 0.00 4.34
47 48 0.809385 CGTCATCACTACCCTCACGT 59.191 55.000 0.00 0.00 0.00 4.49
48 49 0.100682 CCGTCATCACTACCCTCACG 59.899 60.000 0.00 0.00 0.00 4.35
49 50 0.179108 GCCGTCATCACTACCCTCAC 60.179 60.000 0.00 0.00 0.00 3.51
50 51 0.613572 TGCCGTCATCACTACCCTCA 60.614 55.000 0.00 0.00 0.00 3.86
51 52 0.753262 ATGCCGTCATCACTACCCTC 59.247 55.000 0.00 0.00 0.00 4.30
52 53 0.753262 GATGCCGTCATCACTACCCT 59.247 55.000 0.68 0.00 46.44 4.34
53 54 3.290776 GATGCCGTCATCACTACCC 57.709 57.895 0.68 0.00 46.44 3.69
83 84 3.764049 GTCACAAGCGCCGTCGTC 61.764 66.667 2.29 0.00 38.14 4.20
92 93 1.291877 ATCTTCACGCCGTCACAAGC 61.292 55.000 0.00 0.00 0.00 4.01
93 94 1.126846 GAATCTTCACGCCGTCACAAG 59.873 52.381 0.00 0.00 0.00 3.16
94 95 1.144969 GAATCTTCACGCCGTCACAA 58.855 50.000 0.00 0.00 0.00 3.33
95 96 1.006825 CGAATCTTCACGCCGTCACA 61.007 55.000 0.00 0.00 0.00 3.58
96 97 1.683790 CCGAATCTTCACGCCGTCAC 61.684 60.000 0.00 0.00 0.00 3.67
97 98 1.445410 CCGAATCTTCACGCCGTCA 60.445 57.895 0.00 0.00 0.00 4.35
98 99 2.165301 CCCGAATCTTCACGCCGTC 61.165 63.158 0.00 0.00 0.00 4.79
99 100 2.125673 CCCGAATCTTCACGCCGT 60.126 61.111 0.00 0.00 0.00 5.68
100 101 2.890474 CCCCGAATCTTCACGCCG 60.890 66.667 0.00 0.00 0.00 6.46
101 102 1.376812 AACCCCGAATCTTCACGCC 60.377 57.895 0.00 0.00 0.00 5.68
102 103 1.644786 CCAACCCCGAATCTTCACGC 61.645 60.000 0.00 0.00 0.00 5.34
103 104 1.644786 GCCAACCCCGAATCTTCACG 61.645 60.000 0.00 0.00 0.00 4.35
104 105 1.644786 CGCCAACCCCGAATCTTCAC 61.645 60.000 0.00 0.00 0.00 3.18
105 106 1.376683 CGCCAACCCCGAATCTTCA 60.377 57.895 0.00 0.00 0.00 3.02
106 107 2.112815 CCGCCAACCCCGAATCTTC 61.113 63.158 0.00 0.00 0.00 2.87
107 108 2.045340 CCGCCAACCCCGAATCTT 60.045 61.111 0.00 0.00 0.00 2.40
108 109 4.796495 GCCGCCAACCCCGAATCT 62.796 66.667 0.00 0.00 0.00 2.40
123 124 4.832608 CCTTACGCCCTGACCGCC 62.833 72.222 0.00 0.00 0.00 6.13
124 125 4.832608 CCCTTACGCCCTGACCGC 62.833 72.222 0.00 0.00 0.00 5.68
125 126 4.832608 GCCCTTACGCCCTGACCG 62.833 72.222 0.00 0.00 0.00 4.79
126 127 4.832608 CGCCCTTACGCCCTGACC 62.833 72.222 0.00 0.00 0.00 4.02
127 128 4.832608 CCGCCCTTACGCCCTGAC 62.833 72.222 0.00 0.00 0.00 3.51
131 132 4.171103 ATCACCGCCCTTACGCCC 62.171 66.667 0.00 0.00 0.00 6.13
132 133 2.895372 CATCACCGCCCTTACGCC 60.895 66.667 0.00 0.00 0.00 5.68
133 134 3.573491 GCATCACCGCCCTTACGC 61.573 66.667 0.00 0.00 0.00 4.42
143 144 2.136196 TTTGTTTCGCCGGCATCACC 62.136 55.000 28.98 10.23 0.00 4.02
144 145 0.318275 TTTTGTTTCGCCGGCATCAC 60.318 50.000 28.98 18.95 0.00 3.06
145 146 0.600557 ATTTTGTTTCGCCGGCATCA 59.399 45.000 28.98 15.95 0.00 3.07
146 147 1.653609 GAATTTTGTTTCGCCGGCATC 59.346 47.619 28.98 13.41 0.00 3.91
147 148 1.671556 GGAATTTTGTTTCGCCGGCAT 60.672 47.619 28.98 6.52 0.00 4.40
148 149 0.319125 GGAATTTTGTTTCGCCGGCA 60.319 50.000 28.98 11.20 0.00 5.69
149 150 1.011968 GGGAATTTTGTTTCGCCGGC 61.012 55.000 19.07 19.07 33.70 6.13
150 151 0.389296 GGGGAATTTTGTTTCGCCGG 60.389 55.000 0.00 0.00 45.28 6.13
151 152 3.116073 GGGGAATTTTGTTTCGCCG 57.884 52.632 4.78 0.00 45.28 6.46
153 154 1.011968 GGCGGGGAATTTTGTTTCGC 61.012 55.000 0.00 0.00 40.77 4.70
154 155 0.315568 TGGCGGGGAATTTTGTTTCG 59.684 50.000 0.00 0.00 0.00 3.46
155 156 1.343142 ACTGGCGGGGAATTTTGTTTC 59.657 47.619 0.00 0.00 0.00 2.78
156 157 1.343142 GACTGGCGGGGAATTTTGTTT 59.657 47.619 0.00 0.00 0.00 2.83
157 158 0.966179 GACTGGCGGGGAATTTTGTT 59.034 50.000 0.00 0.00 0.00 2.83
158 159 0.112412 AGACTGGCGGGGAATTTTGT 59.888 50.000 0.00 0.00 0.00 2.83
159 160 0.811281 GAGACTGGCGGGGAATTTTG 59.189 55.000 0.00 0.00 0.00 2.44
160 161 0.698818 AGAGACTGGCGGGGAATTTT 59.301 50.000 0.00 0.00 0.00 1.82
161 162 0.035056 CAGAGACTGGCGGGGAATTT 60.035 55.000 0.00 0.00 0.00 1.82
162 163 0.909610 TCAGAGACTGGCGGGGAATT 60.910 55.000 0.00 0.00 31.51 2.17
163 164 0.692419 ATCAGAGACTGGCGGGGAAT 60.692 55.000 0.00 0.00 31.51 3.01
164 165 1.306141 ATCAGAGACTGGCGGGGAA 60.306 57.895 0.00 0.00 31.51 3.97
165 166 2.060383 CATCAGAGACTGGCGGGGA 61.060 63.158 0.00 0.00 31.51 4.81
166 167 1.617018 TTCATCAGAGACTGGCGGGG 61.617 60.000 0.00 0.00 31.51 5.73
167 168 0.179089 CTTCATCAGAGACTGGCGGG 60.179 60.000 0.00 0.00 31.51 6.13
168 169 0.179089 CCTTCATCAGAGACTGGCGG 60.179 60.000 0.00 0.00 31.51 6.13
169 170 0.809241 GCCTTCATCAGAGACTGGCG 60.809 60.000 0.00 0.00 31.02 5.69
170 171 0.809241 CGCCTTCATCAGAGACTGGC 60.809 60.000 0.00 0.00 35.37 4.85
171 172 0.179089 CCGCCTTCATCAGAGACTGG 60.179 60.000 0.00 0.00 31.51 4.00
172 173 0.534412 ACCGCCTTCATCAGAGACTG 59.466 55.000 0.00 0.00 0.00 3.51
173 174 2.028130 CTACCGCCTTCATCAGAGACT 58.972 52.381 0.00 0.00 0.00 3.24
174 175 1.537135 GCTACCGCCTTCATCAGAGAC 60.537 57.143 0.00 0.00 0.00 3.36
175 176 0.747255 GCTACCGCCTTCATCAGAGA 59.253 55.000 0.00 0.00 0.00 3.10
176 177 0.461548 TGCTACCGCCTTCATCAGAG 59.538 55.000 0.00 0.00 34.43 3.35
177 178 0.461548 CTGCTACCGCCTTCATCAGA 59.538 55.000 0.00 0.00 34.43 3.27
178 179 0.531532 CCTGCTACCGCCTTCATCAG 60.532 60.000 0.00 0.00 34.43 2.90
179 180 0.975556 TCCTGCTACCGCCTTCATCA 60.976 55.000 0.00 0.00 34.43 3.07
180 181 0.178068 TTCCTGCTACCGCCTTCATC 59.822 55.000 0.00 0.00 34.43 2.92
181 182 0.839946 ATTCCTGCTACCGCCTTCAT 59.160 50.000 0.00 0.00 34.43 2.57
182 183 0.107703 CATTCCTGCTACCGCCTTCA 60.108 55.000 0.00 0.00 34.43 3.02
183 184 0.178068 TCATTCCTGCTACCGCCTTC 59.822 55.000 0.00 0.00 34.43 3.46
184 185 0.107654 GTCATTCCTGCTACCGCCTT 60.108 55.000 0.00 0.00 34.43 4.35
185 186 1.264749 TGTCATTCCTGCTACCGCCT 61.265 55.000 0.00 0.00 34.43 5.52
186 187 0.392461 TTGTCATTCCTGCTACCGCC 60.392 55.000 0.00 0.00 34.43 6.13
187 188 1.331756 CATTGTCATTCCTGCTACCGC 59.668 52.381 0.00 0.00 0.00 5.68
188 189 1.942657 CCATTGTCATTCCTGCTACCG 59.057 52.381 0.00 0.00 0.00 4.02
189 190 2.301346 CCCATTGTCATTCCTGCTACC 58.699 52.381 0.00 0.00 0.00 3.18
190 191 1.678101 GCCCATTGTCATTCCTGCTAC 59.322 52.381 0.00 0.00 0.00 3.58
191 192 1.284491 TGCCCATTGTCATTCCTGCTA 59.716 47.619 0.00 0.00 0.00 3.49
192 193 0.040058 TGCCCATTGTCATTCCTGCT 59.960 50.000 0.00 0.00 0.00 4.24
193 194 0.896923 TTGCCCATTGTCATTCCTGC 59.103 50.000 0.00 0.00 0.00 4.85
194 195 3.319972 CCTATTGCCCATTGTCATTCCTG 59.680 47.826 0.00 0.00 0.00 3.86
195 196 3.569491 CCTATTGCCCATTGTCATTCCT 58.431 45.455 0.00 0.00 0.00 3.36
196 197 2.629617 CCCTATTGCCCATTGTCATTCC 59.370 50.000 0.00 0.00 0.00 3.01
197 198 3.299503 ACCCTATTGCCCATTGTCATTC 58.700 45.455 0.00 0.00 0.00 2.67
198 199 3.403228 ACCCTATTGCCCATTGTCATT 57.597 42.857 0.00 0.00 0.00 2.57
199 200 3.403228 AACCCTATTGCCCATTGTCAT 57.597 42.857 0.00 0.00 0.00 3.06
200 201 2.917713 AACCCTATTGCCCATTGTCA 57.082 45.000 0.00 0.00 0.00 3.58
201 202 3.860641 CAAAACCCTATTGCCCATTGTC 58.139 45.455 0.00 0.00 0.00 3.18
202 203 2.027285 GCAAAACCCTATTGCCCATTGT 60.027 45.455 0.00 0.00 45.73 2.71
203 204 2.631267 GCAAAACCCTATTGCCCATTG 58.369 47.619 0.00 0.00 45.73 2.82
210 211 1.194218 CCCCAGGCAAAACCCTATTG 58.806 55.000 0.00 0.00 40.58 1.90
211 212 0.042581 CCCCCAGGCAAAACCCTATT 59.957 55.000 0.00 0.00 40.58 1.73
212 213 1.153041 ACCCCCAGGCAAAACCCTAT 61.153 55.000 0.00 0.00 40.58 2.57
213 214 1.780911 ACCCCCAGGCAAAACCCTA 60.781 57.895 0.00 0.00 40.58 3.53
214 215 3.116950 ACCCCCAGGCAAAACCCT 61.117 61.111 0.00 0.00 40.58 4.34
215 216 2.746947 ATCACCCCCAGGCAAAACCC 62.747 60.000 0.00 0.00 40.58 4.11
216 217 1.229177 ATCACCCCCAGGCAAAACC 60.229 57.895 0.00 0.00 36.11 3.27
217 218 1.543944 CCATCACCCCCAGGCAAAAC 61.544 60.000 0.00 0.00 36.11 2.43
218 219 1.229145 CCATCACCCCCAGGCAAAA 60.229 57.895 0.00 0.00 36.11 2.44
219 220 2.444696 CCATCACCCCCAGGCAAA 59.555 61.111 0.00 0.00 36.11 3.68
220 221 4.380945 GCCATCACCCCCAGGCAA 62.381 66.667 0.00 0.00 46.26 4.52
223 224 4.133373 CCAGCCATCACCCCCAGG 62.133 72.222 0.00 0.00 40.04 4.45
224 225 4.133373 CCCAGCCATCACCCCCAG 62.133 72.222 0.00 0.00 0.00 4.45
228 229 4.864334 CTCGCCCAGCCATCACCC 62.864 72.222 0.00 0.00 0.00 4.61
237 238 2.476534 AAAACATTGCGCTCGCCCAG 62.477 55.000 9.73 3.86 41.09 4.45
238 239 2.081425 AAAAACATTGCGCTCGCCCA 62.081 50.000 9.73 0.00 41.09 5.36
239 240 1.372872 AAAAACATTGCGCTCGCCC 60.373 52.632 9.73 0.00 41.09 6.13
240 241 4.243383 AAAAACATTGCGCTCGCC 57.757 50.000 9.73 0.00 41.09 5.54
547 548 2.199236 CTGGAACGCTTCGGTATAACC 58.801 52.381 0.00 0.00 34.05 2.85
548 549 1.591619 GCTGGAACGCTTCGGTATAAC 59.408 52.381 0.00 0.00 0.00 1.89
549 550 1.205179 TGCTGGAACGCTTCGGTATAA 59.795 47.619 0.00 0.00 0.00 0.98
550 551 0.818938 TGCTGGAACGCTTCGGTATA 59.181 50.000 0.00 0.00 0.00 1.47
551 552 0.460284 CTGCTGGAACGCTTCGGTAT 60.460 55.000 0.00 0.00 0.00 2.73
552 553 1.080093 CTGCTGGAACGCTTCGGTA 60.080 57.895 0.00 0.00 0.00 4.02
553 554 2.357517 CTGCTGGAACGCTTCGGT 60.358 61.111 0.00 0.00 0.00 4.69
554 555 3.793144 GCTGCTGGAACGCTTCGG 61.793 66.667 0.00 0.00 0.00 4.30
555 556 3.020026 CTGCTGCTGGAACGCTTCG 62.020 63.158 0.00 0.00 0.00 3.79
556 557 2.684843 CCTGCTGCTGGAACGCTTC 61.685 63.158 19.63 0.00 0.00 3.86
557 558 2.670934 CCTGCTGCTGGAACGCTT 60.671 61.111 19.63 0.00 0.00 4.68
558 559 3.482232 AACCTGCTGCTGGAACGCT 62.482 57.895 29.14 6.21 0.00 5.07
559 560 2.970974 GAACCTGCTGCTGGAACGC 61.971 63.158 29.14 12.61 0.00 4.84
560 561 2.671177 CGAACCTGCTGCTGGAACG 61.671 63.158 29.14 25.61 0.00 3.95
561 562 1.598130 ACGAACCTGCTGCTGGAAC 60.598 57.895 29.14 19.89 0.00 3.62
562 563 1.597854 CACGAACCTGCTGCTGGAA 60.598 57.895 29.14 0.00 0.00 3.53
563 564 2.031012 CACGAACCTGCTGCTGGA 59.969 61.111 29.14 0.00 0.00 3.86
564 565 2.809861 ATCCACGAACCTGCTGCTGG 62.810 60.000 22.17 22.17 0.00 4.85
565 566 1.376424 ATCCACGAACCTGCTGCTG 60.376 57.895 0.00 0.00 0.00 4.41
566 567 1.376424 CATCCACGAACCTGCTGCT 60.376 57.895 0.00 0.00 0.00 4.24
567 568 1.375908 TCATCCACGAACCTGCTGC 60.376 57.895 0.00 0.00 0.00 5.25
568 569 0.036952 AGTCATCCACGAACCTGCTG 60.037 55.000 0.00 0.00 0.00 4.41
569 570 0.247736 GAGTCATCCACGAACCTGCT 59.752 55.000 0.00 0.00 0.00 4.24
570 571 1.078759 CGAGTCATCCACGAACCTGC 61.079 60.000 0.00 0.00 0.00 4.85
571 572 0.243907 ACGAGTCATCCACGAACCTG 59.756 55.000 0.00 0.00 0.00 4.00
572 573 0.243907 CACGAGTCATCCACGAACCT 59.756 55.000 0.00 0.00 0.00 3.50
573 574 0.242825 TCACGAGTCATCCACGAACC 59.757 55.000 0.00 0.00 0.00 3.62
574 575 1.068472 ACTCACGAGTCATCCACGAAC 60.068 52.381 0.00 0.00 36.92 3.95
575 576 1.244816 ACTCACGAGTCATCCACGAA 58.755 50.000 0.00 0.00 36.92 3.85
576 577 1.068541 CAACTCACGAGTCATCCACGA 60.069 52.381 0.00 0.00 41.58 4.35
577 578 1.340658 CAACTCACGAGTCATCCACG 58.659 55.000 0.00 0.00 41.58 4.94
578 579 1.714794 CCAACTCACGAGTCATCCAC 58.285 55.000 0.00 0.00 41.58 4.02
579 580 0.037326 GCCAACTCACGAGTCATCCA 60.037 55.000 0.00 0.00 41.58 3.41
580 581 0.247736 AGCCAACTCACGAGTCATCC 59.752 55.000 0.00 0.00 41.58 3.51
581 582 1.354040 CAGCCAACTCACGAGTCATC 58.646 55.000 0.00 0.00 41.58 2.92
582 583 0.036952 CCAGCCAACTCACGAGTCAT 60.037 55.000 0.00 0.00 41.58 3.06
583 584 1.112916 TCCAGCCAACTCACGAGTCA 61.113 55.000 0.00 0.00 41.58 3.41
584 585 0.389166 CTCCAGCCAACTCACGAGTC 60.389 60.000 0.00 0.00 41.58 3.36
585 586 1.668294 CTCCAGCCAACTCACGAGT 59.332 57.895 0.00 0.00 44.94 4.18
586 587 1.739562 GCTCCAGCCAACTCACGAG 60.740 63.158 0.00 0.00 34.31 4.18
587 588 2.038814 TTGCTCCAGCCAACTCACGA 62.039 55.000 0.00 0.00 41.18 4.35
588 589 1.572085 CTTGCTCCAGCCAACTCACG 61.572 60.000 0.00 0.00 41.18 4.35
589 590 1.239968 CCTTGCTCCAGCCAACTCAC 61.240 60.000 0.00 0.00 41.18 3.51
590 591 1.073722 CCTTGCTCCAGCCAACTCA 59.926 57.895 0.00 0.00 41.18 3.41
591 592 1.676967 CCCTTGCTCCAGCCAACTC 60.677 63.158 0.00 0.00 41.18 3.01
592 593 1.719063 TTCCCTTGCTCCAGCCAACT 61.719 55.000 0.00 0.00 41.18 3.16
593 594 0.827507 TTTCCCTTGCTCCAGCCAAC 60.828 55.000 0.00 0.00 41.18 3.77
662 663 1.959085 GACGTACGGTCCACTTGGA 59.041 57.895 21.06 0.00 43.08 3.53
683 684 2.746362 GTCAAGAATGTCCAGCTGAAGG 59.254 50.000 17.39 0.00 0.00 3.46
722 730 3.978718 GTGTACTCCCACGTCCTATAC 57.021 52.381 0.00 0.00 0.00 1.47
888 899 9.515226 AGGCAGAACAAGTGTTTTTATAGAATA 57.485 29.630 0.00 0.00 38.56 1.75
906 918 1.433534 CTGTTCGGAGAAGGCAGAAC 58.566 55.000 0.00 0.00 45.90 3.01
920 932 1.168714 GGAGGGATGTTGTGCTGTTC 58.831 55.000 0.00 0.00 0.00 3.18
925 937 2.401766 CGCTGGAGGGATGTTGTGC 61.402 63.158 0.00 0.00 0.00 4.57
963 976 3.515562 AGGACTTGACAAGTGAGGAGAT 58.484 45.455 25.20 0.00 43.03 2.75
1043 1060 1.375908 GAACATGGAGGAGCGTGCA 60.376 57.895 0.00 0.00 0.00 4.57
1044 1061 2.109126 GGAACATGGAGGAGCGTGC 61.109 63.158 0.00 0.00 0.00 5.34
1094 1120 3.726517 CAACGGCAAGCGTCTGGG 61.727 66.667 0.00 0.00 0.00 4.45
1257 1328 4.353777 TCTCTCTATTAGCAACCCACACT 58.646 43.478 0.00 0.00 0.00 3.55
1394 1489 7.865385 TGTTTATGTTGGTTTGTCTTCTATTGC 59.135 33.333 0.00 0.00 0.00 3.56
1461 1574 1.211457 GATGATGGGCCTTCTGTGAGT 59.789 52.381 19.03 0.61 0.00 3.41
1758 1907 3.571571 GTTAATCAAACCTTTGGTCCGC 58.428 45.455 0.00 0.00 38.66 5.54
1908 2063 4.048504 GTTTGGATTGTACTGTTTGCCAC 58.951 43.478 0.00 0.00 0.00 5.01
1917 2072 6.160459 AGGGATCAATAGGTTTGGATTGTACT 59.840 38.462 0.00 0.00 35.10 2.73
1995 2150 0.108804 AGAATGGACGTGCAGTACCG 60.109 55.000 16.77 0.00 30.72 4.02
2000 2155 1.730501 ATCACAGAATGGACGTGCAG 58.269 50.000 16.77 4.06 43.62 4.41
2001 2156 1.805943 CAATCACAGAATGGACGTGCA 59.194 47.619 13.59 13.59 43.62 4.57
2326 2502 7.203218 AGGTAAAGAACATCTTCAGCAAAAAC 58.797 34.615 0.00 0.00 35.27 2.43
2444 2730 7.609760 AAGAACATCACGAGCATTATTAACA 57.390 32.000 0.00 0.00 0.00 2.41
2862 3179 4.020128 CCTAGGGCTATTTGATACCTGGTC 60.020 50.000 0.63 0.00 32.87 4.02
3236 3590 1.334869 CCACATCGCCTTTATGAAGCC 59.665 52.381 0.00 0.00 0.00 4.35
3249 3603 0.960364 CCACCAAACTCCCCACATCG 60.960 60.000 0.00 0.00 0.00 3.84
3396 3750 3.054802 GGGGCATATCAATCTCCTGTAGG 60.055 52.174 0.00 0.00 0.00 3.18
3587 3961 8.803799 GTTACTATAATTGGCCATTGAAAAACG 58.196 33.333 6.09 0.00 0.00 3.60
3646 4020 3.487563 GGAAATAGCTTGGTGTTTCCG 57.512 47.619 19.62 0.00 39.92 4.30
3650 4024 3.577848 TGCAATGGAAATAGCTTGGTGTT 59.422 39.130 0.00 0.00 0.00 3.32
3668 4042 4.617520 TCGTTGAGGCCGCTGCAA 62.618 61.111 8.34 3.64 40.13 4.08
3672 4046 2.357517 CAAGTCGTTGAGGCCGCT 60.358 61.111 8.34 0.00 35.46 5.52
3675 4049 0.868406 CTGAACAAGTCGTTGAGGCC 59.132 55.000 0.00 0.00 38.19 5.19
3676 4050 1.527311 GACTGAACAAGTCGTTGAGGC 59.473 52.381 0.00 0.00 45.76 4.70
3685 4059 3.324846 TCAGCCTGTATGACTGAACAAGT 59.675 43.478 0.00 0.00 43.85 3.16
3717 4091 3.297134 ACTTCAGAAACCAGCTCCAAA 57.703 42.857 0.00 0.00 0.00 3.28
3746 4120 6.458210 CAATTTGGTTTATGAAGGTTCAGCT 58.542 36.000 0.00 0.00 41.08 4.24
3770 4144 8.223100 CAGCCAAAACTTGATTATTTGTTAAGC 58.777 33.333 0.00 0.00 33.31 3.09
3778 4152 4.527816 TGCTCCAGCCAAAACTTGATTATT 59.472 37.500 0.00 0.00 41.18 1.40
3795 4169 1.455402 TTGTTGCTTGCCTGCTCCA 60.455 52.632 0.00 0.00 0.00 3.86
3797 4171 1.370900 CGTTGTTGCTTGCCTGCTC 60.371 57.895 0.00 0.00 0.00 4.26
3814 4188 2.092211 GTGTTATTCAGTGGACGCTTCG 59.908 50.000 0.00 0.00 0.00 3.79
3815 4189 2.415512 GGTGTTATTCAGTGGACGCTTC 59.584 50.000 0.00 0.00 0.00 3.86
3817 4191 1.623811 AGGTGTTATTCAGTGGACGCT 59.376 47.619 0.00 0.00 0.00 5.07
3830 4204 4.466370 CAGGTCTGATTGTCCTAGGTGTTA 59.534 45.833 9.08 0.00 32.98 2.41
3871 4245 5.162000 GCATCAGCTTTGTTACTATGGTC 57.838 43.478 0.00 0.00 37.91 4.02
3915 4289 6.016777 GCCTATGTGCTATCTTGCTGTTTATT 60.017 38.462 0.00 0.00 0.00 1.40
3919 4293 3.209410 GCCTATGTGCTATCTTGCTGTT 58.791 45.455 0.00 0.00 0.00 3.16
3941 4315 6.051717 TGTTAAAATCATCCTGAGCTAGCTC 58.948 40.000 33.47 33.47 43.01 4.09
3942 4316 5.994250 TGTTAAAATCATCCTGAGCTAGCT 58.006 37.500 19.45 19.45 0.00 3.32
3943 4317 6.683974 TTGTTAAAATCATCCTGAGCTAGC 57.316 37.500 6.62 6.62 0.00 3.42
3961 4335 6.146837 CGGCCATCAAACATGAAAATTTGTTA 59.853 34.615 2.24 0.00 37.16 2.41
3962 4336 5.049543 CGGCCATCAAACATGAAAATTTGTT 60.050 36.000 2.24 0.00 37.16 2.83
3966 4340 4.533919 TCGGCCATCAAACATGAAAATT 57.466 36.364 2.24 0.00 0.00 1.82
3967 4341 4.497300 CTTCGGCCATCAAACATGAAAAT 58.503 39.130 2.24 0.00 0.00 1.82
3969 4343 2.230992 CCTTCGGCCATCAAACATGAAA 59.769 45.455 2.24 0.00 0.00 2.69
3971 4345 1.004161 TCCTTCGGCCATCAAACATGA 59.996 47.619 2.24 0.00 0.00 3.07
3972 4346 1.462616 TCCTTCGGCCATCAAACATG 58.537 50.000 2.24 0.00 0.00 3.21
3973 4347 2.214376 TTCCTTCGGCCATCAAACAT 57.786 45.000 2.24 0.00 0.00 2.71
3974 4348 2.091541 GATTCCTTCGGCCATCAAACA 58.908 47.619 2.24 0.00 0.00 2.83
3975 4349 2.091541 TGATTCCTTCGGCCATCAAAC 58.908 47.619 2.24 0.00 0.00 2.93
3976 4350 2.091541 GTGATTCCTTCGGCCATCAAA 58.908 47.619 2.24 0.00 0.00 2.69
3978 4352 0.911769 AGTGATTCCTTCGGCCATCA 59.088 50.000 2.24 0.00 0.00 3.07
3979 4353 1.134401 TCAGTGATTCCTTCGGCCATC 60.134 52.381 2.24 0.00 0.00 3.51
3980 4354 0.911769 TCAGTGATTCCTTCGGCCAT 59.088 50.000 2.24 0.00 0.00 4.40
3981 4355 0.911769 ATCAGTGATTCCTTCGGCCA 59.088 50.000 2.24 0.00 0.00 5.36
3982 4356 2.910688 TATCAGTGATTCCTTCGGCC 57.089 50.000 11.68 0.00 0.00 6.13
3983 4357 6.861065 TTTAATATCAGTGATTCCTTCGGC 57.139 37.500 11.68 0.00 0.00 5.54
4002 4376 9.801873 GATTGCTTAGGCTGTTCATTTATTTAA 57.198 29.630 0.00 0.00 39.59 1.52
4004 4378 7.977853 CAGATTGCTTAGGCTGTTCATTTATTT 59.022 33.333 0.00 0.00 39.59 1.40
4005 4379 7.417116 CCAGATTGCTTAGGCTGTTCATTTATT 60.417 37.037 0.00 0.00 39.59 1.40
4006 4380 6.040166 CCAGATTGCTTAGGCTGTTCATTTAT 59.960 38.462 0.00 0.00 39.59 1.40
4007 4381 5.357878 CCAGATTGCTTAGGCTGTTCATTTA 59.642 40.000 0.00 0.00 39.59 1.40
4008 4382 4.159135 CCAGATTGCTTAGGCTGTTCATTT 59.841 41.667 0.00 0.00 39.59 2.32
4010 4384 3.285484 CCAGATTGCTTAGGCTGTTCAT 58.715 45.455 0.00 0.00 39.59 2.57
4011 4385 2.618816 CCCAGATTGCTTAGGCTGTTCA 60.619 50.000 0.00 0.00 39.59 3.18
4012 4386 2.019984 CCCAGATTGCTTAGGCTGTTC 58.980 52.381 0.00 0.00 39.59 3.18
4013 4387 1.635487 TCCCAGATTGCTTAGGCTGTT 59.365 47.619 0.00 0.00 39.59 3.16
4017 4391 3.817647 CAGTAATCCCAGATTGCTTAGGC 59.182 47.826 5.34 0.00 39.26 3.93
4018 4392 5.041191 ACAGTAATCCCAGATTGCTTAGG 57.959 43.478 5.34 0.00 0.00 2.69
4019 4393 6.599244 TGAAACAGTAATCCCAGATTGCTTAG 59.401 38.462 5.34 0.00 0.00 2.18
4020 4394 6.374333 GTGAAACAGTAATCCCAGATTGCTTA 59.626 38.462 5.34 0.00 36.32 3.09
4021 4395 5.183904 GTGAAACAGTAATCCCAGATTGCTT 59.816 40.000 5.34 0.00 36.32 3.91
4022 4396 4.702131 GTGAAACAGTAATCCCAGATTGCT 59.298 41.667 2.54 2.54 36.32 3.91
4023 4397 4.702131 AGTGAAACAGTAATCCCAGATTGC 59.298 41.667 0.08 0.00 41.43 3.56
4024 4398 6.824305 AAGTGAAACAGTAATCCCAGATTG 57.176 37.500 0.08 0.00 41.43 2.67
4025 4399 7.004086 TGAAAGTGAAACAGTAATCCCAGATT 58.996 34.615 0.00 0.00 41.43 2.40
4026 4400 6.431234 GTGAAAGTGAAACAGTAATCCCAGAT 59.569 38.462 0.00 0.00 41.43 2.90
4027 4401 5.763204 GTGAAAGTGAAACAGTAATCCCAGA 59.237 40.000 0.00 0.00 41.43 3.86
4028 4402 5.765182 AGTGAAAGTGAAACAGTAATCCCAG 59.235 40.000 0.00 0.00 41.43 4.45
4029 4403 5.530915 CAGTGAAAGTGAAACAGTAATCCCA 59.469 40.000 0.00 0.00 40.62 4.37
4030 4404 5.562890 GCAGTGAAAGTGAAACAGTAATCCC 60.563 44.000 0.00 0.00 40.62 3.85
4032 4406 5.909610 GTGCAGTGAAAGTGAAACAGTAATC 59.090 40.000 0.00 0.00 40.62 1.75
4033 4407 5.590259 AGTGCAGTGAAAGTGAAACAGTAAT 59.410 36.000 0.00 0.00 40.62 1.89
4034 4408 4.941263 AGTGCAGTGAAAGTGAAACAGTAA 59.059 37.500 0.00 0.00 40.62 2.24
4036 4410 3.127548 CAGTGCAGTGAAAGTGAAACAGT 59.872 43.478 16.94 0.00 40.62 3.55
4037 4411 3.688272 CAGTGCAGTGAAAGTGAAACAG 58.312 45.455 16.94 0.00 40.62 3.16
4038 4412 2.159393 GCAGTGCAGTGAAAGTGAAACA 60.159 45.455 25.76 0.00 40.62 2.83
4039 4413 2.454055 GCAGTGCAGTGAAAGTGAAAC 58.546 47.619 25.76 0.00 40.62 2.78
4040 4414 1.063912 CGCAGTGCAGTGAAAGTGAAA 59.936 47.619 25.76 0.00 40.62 2.69
4041 4415 0.657312 CGCAGTGCAGTGAAAGTGAA 59.343 50.000 25.76 0.00 40.62 3.18
4042 4416 0.179086 TCGCAGTGCAGTGAAAGTGA 60.179 50.000 25.76 7.23 40.62 3.41
4044 4418 0.461870 TGTCGCAGTGCAGTGAAAGT 60.462 50.000 25.76 0.00 0.00 2.66
4045 4419 0.657312 TTGTCGCAGTGCAGTGAAAG 59.343 50.000 25.76 14.61 0.00 2.62
4046 4420 1.002576 CATTGTCGCAGTGCAGTGAAA 60.003 47.619 25.76 12.78 0.00 2.69
4048 4422 1.229975 CCATTGTCGCAGTGCAGTGA 61.230 55.000 25.76 5.32 0.00 3.41
4049 4423 1.208358 CCATTGTCGCAGTGCAGTG 59.792 57.895 17.56 17.56 0.00 3.66
4051 4425 0.952497 AGTCCATTGTCGCAGTGCAG 60.952 55.000 16.83 8.26 0.00 4.41
4052 4426 1.071299 AGTCCATTGTCGCAGTGCA 59.929 52.632 16.83 0.00 0.00 4.57
4053 4427 1.230635 ACAGTCCATTGTCGCAGTGC 61.231 55.000 4.58 4.58 0.00 4.40
4054 4428 0.514255 CACAGTCCATTGTCGCAGTG 59.486 55.000 0.00 0.00 0.00 3.66
4055 4429 0.392706 TCACAGTCCATTGTCGCAGT 59.607 50.000 0.00 0.00 0.00 4.40
4056 4430 1.073964 CTCACAGTCCATTGTCGCAG 58.926 55.000 0.00 0.00 0.00 5.18
4057 4431 0.392706 ACTCACAGTCCATTGTCGCA 59.607 50.000 0.00 0.00 0.00 5.10
4058 4432 0.792640 CACTCACAGTCCATTGTCGC 59.207 55.000 0.00 0.00 0.00 5.19
4059 4433 1.270305 ACCACTCACAGTCCATTGTCG 60.270 52.381 0.00 0.00 0.00 4.35
4060 4434 2.417719 GACCACTCACAGTCCATTGTC 58.582 52.381 0.00 0.00 0.00 3.18
4061 4435 1.270305 CGACCACTCACAGTCCATTGT 60.270 52.381 0.00 0.00 0.00 2.71
4062 4436 1.270305 ACGACCACTCACAGTCCATTG 60.270 52.381 0.00 0.00 0.00 2.82
4063 4437 1.000955 GACGACCACTCACAGTCCATT 59.999 52.381 0.00 0.00 0.00 3.16
4064 4438 0.603569 GACGACCACTCACAGTCCAT 59.396 55.000 0.00 0.00 0.00 3.41
4065 4439 1.792118 CGACGACCACTCACAGTCCA 61.792 60.000 0.00 0.00 0.00 4.02
4066 4440 1.081376 CGACGACCACTCACAGTCC 60.081 63.158 0.00 0.00 0.00 3.85
4067 4441 1.081376 CCGACGACCACTCACAGTC 60.081 63.158 0.00 0.00 0.00 3.51
4068 4442 1.826921 ACCGACGACCACTCACAGT 60.827 57.895 0.00 0.00 0.00 3.55
4069 4443 1.371758 CACCGACGACCACTCACAG 60.372 63.158 0.00 0.00 0.00 3.66
4070 4444 1.669049 AACACCGACGACCACTCACA 61.669 55.000 0.00 0.00 0.00 3.58
4071 4445 0.529119 AAACACCGACGACCACTCAC 60.529 55.000 0.00 0.00 0.00 3.51
4072 4446 0.249155 GAAACACCGACGACCACTCA 60.249 55.000 0.00 0.00 0.00 3.41
4073 4447 0.249155 TGAAACACCGACGACCACTC 60.249 55.000 0.00 0.00 0.00 3.51
4074 4448 0.391597 ATGAAACACCGACGACCACT 59.608 50.000 0.00 0.00 0.00 4.00
4075 4449 0.788391 GATGAAACACCGACGACCAC 59.212 55.000 0.00 0.00 0.00 4.16
4076 4450 0.677288 AGATGAAACACCGACGACCA 59.323 50.000 0.00 0.00 0.00 4.02
4077 4451 1.068474 CAGATGAAACACCGACGACC 58.932 55.000 0.00 0.00 0.00 4.79
4078 4452 2.060326 TCAGATGAAACACCGACGAC 57.940 50.000 0.00 0.00 0.00 4.34
4079 4453 2.606108 CATCAGATGAAACACCGACGA 58.394 47.619 4.11 0.00 0.00 4.20
4080 4454 1.061131 GCATCAGATGAAACACCGACG 59.939 52.381 15.12 0.00 0.00 5.12
4081 4455 2.076100 TGCATCAGATGAAACACCGAC 58.924 47.619 15.12 0.00 0.00 4.79
4082 4456 2.470983 TGCATCAGATGAAACACCGA 57.529 45.000 15.12 0.00 0.00 4.69
4083 4457 3.873361 AGTATGCATCAGATGAAACACCG 59.127 43.478 15.12 0.00 0.00 4.94
4084 4458 6.540189 AGTTAGTATGCATCAGATGAAACACC 59.460 38.462 15.12 0.00 0.00 4.16
4085 4459 7.545362 AGTTAGTATGCATCAGATGAAACAC 57.455 36.000 15.12 6.50 0.00 3.32
4086 4460 9.098355 GTTAGTTAGTATGCATCAGATGAAACA 57.902 33.333 15.12 3.15 0.00 2.83
4087 4461 8.552034 GGTTAGTTAGTATGCATCAGATGAAAC 58.448 37.037 15.12 8.14 0.00 2.78
4088 4462 7.438160 CGGTTAGTTAGTATGCATCAGATGAAA 59.562 37.037 15.12 1.57 0.00 2.69
4089 4463 6.923508 CGGTTAGTTAGTATGCATCAGATGAA 59.076 38.462 15.12 3.58 0.00 2.57
4090 4464 6.447162 CGGTTAGTTAGTATGCATCAGATGA 58.553 40.000 15.12 0.00 0.00 2.92
4091 4465 5.119279 GCGGTTAGTTAGTATGCATCAGATG 59.881 44.000 0.19 5.98 0.00 2.90
4092 4466 5.230942 GCGGTTAGTTAGTATGCATCAGAT 58.769 41.667 0.19 0.00 0.00 2.90
4093 4467 4.617959 GCGGTTAGTTAGTATGCATCAGA 58.382 43.478 0.19 0.00 0.00 3.27
4094 4468 3.425525 CGCGGTTAGTTAGTATGCATCAG 59.574 47.826 0.19 0.00 0.00 2.90
4095 4469 3.067040 TCGCGGTTAGTTAGTATGCATCA 59.933 43.478 6.13 0.00 0.00 3.07
4096 4470 3.635331 TCGCGGTTAGTTAGTATGCATC 58.365 45.455 6.13 0.00 0.00 3.91
4097 4471 3.720949 TCGCGGTTAGTTAGTATGCAT 57.279 42.857 6.13 3.79 0.00 3.96
4098 4472 3.377439 CATCGCGGTTAGTTAGTATGCA 58.623 45.455 6.13 0.00 0.00 3.96
4099 4473 2.729882 CCATCGCGGTTAGTTAGTATGC 59.270 50.000 6.13 0.00 0.00 3.14
4100 4474 4.227538 CTCCATCGCGGTTAGTTAGTATG 58.772 47.826 6.13 0.00 35.57 2.39
4101 4475 3.255149 CCTCCATCGCGGTTAGTTAGTAT 59.745 47.826 6.13 0.00 35.57 2.12
4102 4476 2.620115 CCTCCATCGCGGTTAGTTAGTA 59.380 50.000 6.13 0.00 35.57 1.82
4103 4477 1.407979 CCTCCATCGCGGTTAGTTAGT 59.592 52.381 6.13 0.00 35.57 2.24
4104 4478 1.679680 TCCTCCATCGCGGTTAGTTAG 59.320 52.381 6.13 0.00 35.57 2.34
4105 4479 1.406539 GTCCTCCATCGCGGTTAGTTA 59.593 52.381 6.13 0.00 35.57 2.24
4106 4480 0.175073 GTCCTCCATCGCGGTTAGTT 59.825 55.000 6.13 0.00 35.57 2.24
4107 4481 1.814527 GTCCTCCATCGCGGTTAGT 59.185 57.895 6.13 0.00 35.57 2.24
4108 4482 1.299165 CGTCCTCCATCGCGGTTAG 60.299 63.158 6.13 0.00 35.57 2.34
4109 4483 1.996786 GACGTCCTCCATCGCGGTTA 61.997 60.000 6.13 0.00 35.57 2.85
4110 4484 3.352338 GACGTCCTCCATCGCGGTT 62.352 63.158 6.13 0.00 35.57 4.44
4111 4485 3.823330 GACGTCCTCCATCGCGGT 61.823 66.667 6.13 0.00 35.57 5.68
4112 4486 4.907034 CGACGTCCTCCATCGCGG 62.907 72.222 10.58 0.00 0.00 6.46
4113 4487 3.182472 ATCGACGTCCTCCATCGCG 62.182 63.158 10.58 0.00 35.82 5.87
4114 4488 1.370657 GATCGACGTCCTCCATCGC 60.371 63.158 10.58 0.00 35.82 4.58
4115 4489 1.082692 CGATCGACGTCCTCCATCG 60.083 63.158 10.26 13.55 37.22 3.84
4116 4490 1.283181 CCGATCGACGTCCTCCATC 59.717 63.158 18.66 5.76 40.78 3.51
4117 4491 2.846652 GCCGATCGACGTCCTCCAT 61.847 63.158 18.66 0.00 40.78 3.41
4118 4492 3.515286 GCCGATCGACGTCCTCCA 61.515 66.667 18.66 0.00 40.78 3.86
4119 4493 3.471244 CTGCCGATCGACGTCCTCC 62.471 68.421 18.66 0.00 40.78 4.30
4120 4494 2.024871 CTGCCGATCGACGTCCTC 59.975 66.667 18.66 6.35 40.78 3.71
4121 4495 1.028330 TAACTGCCGATCGACGTCCT 61.028 55.000 18.66 0.00 40.78 3.85
4122 4496 0.179156 TTAACTGCCGATCGACGTCC 60.179 55.000 18.66 0.00 40.78 4.79
4123 4497 0.912528 GTTAACTGCCGATCGACGTC 59.087 55.000 18.66 5.18 40.78 4.34
4124 4498 0.241749 TGTTAACTGCCGATCGACGT 59.758 50.000 18.66 7.38 40.78 4.34
4125 4499 0.914551 CTGTTAACTGCCGATCGACG 59.085 55.000 18.66 6.70 42.18 5.12
4126 4500 2.273370 TCTGTTAACTGCCGATCGAC 57.727 50.000 18.66 5.29 0.00 4.20
4127 4501 2.602878 GTTCTGTTAACTGCCGATCGA 58.397 47.619 18.66 0.00 0.00 3.59
4128 4502 1.659098 GGTTCTGTTAACTGCCGATCG 59.341 52.381 8.51 8.51 0.00 3.69
4129 4503 1.659098 CGGTTCTGTTAACTGCCGATC 59.341 52.381 19.68 5.19 41.45 3.69
4130 4504 1.674817 CCGGTTCTGTTAACTGCCGAT 60.675 52.381 23.51 0.00 41.45 4.18
4131 4505 0.320073 CCGGTTCTGTTAACTGCCGA 60.320 55.000 23.51 7.81 41.45 5.54
4132 4506 1.908066 GCCGGTTCTGTTAACTGCCG 61.908 60.000 18.31 18.31 38.99 5.69
4133 4507 1.873863 GCCGGTTCTGTTAACTGCC 59.126 57.895 1.90 3.43 0.00 4.85
4134 4508 1.226030 ACGCCGGTTCTGTTAACTGC 61.226 55.000 1.90 0.00 0.00 4.40
4135 4509 0.788391 GACGCCGGTTCTGTTAACTG 59.212 55.000 1.90 6.66 0.00 3.16
4136 4510 0.665369 CGACGCCGGTTCTGTTAACT 60.665 55.000 1.90 0.00 0.00 2.24
4137 4511 1.777199 CGACGCCGGTTCTGTTAAC 59.223 57.895 1.90 0.00 0.00 2.01
4138 4512 4.248402 CGACGCCGGTTCTGTTAA 57.752 55.556 1.90 0.00 0.00 2.01
4149 4523 3.419759 AAACGTGCATCCGACGCC 61.420 61.111 3.48 0.00 40.56 5.68
4150 4524 2.202171 CAAACGTGCATCCGACGC 60.202 61.111 3.48 0.00 40.56 5.19
4160 4534 0.443869 CATCTTCTCCGGCAAACGTG 59.556 55.000 0.00 0.00 42.24 4.49
4161 4535 0.034896 ACATCTTCTCCGGCAAACGT 59.965 50.000 0.00 0.00 42.24 3.99
4162 4536 0.443869 CACATCTTCTCCGGCAAACG 59.556 55.000 0.00 0.00 43.80 3.60
4163 4537 1.464997 GTCACATCTTCTCCGGCAAAC 59.535 52.381 0.00 0.00 0.00 2.93
4164 4538 1.808411 GTCACATCTTCTCCGGCAAA 58.192 50.000 0.00 0.00 0.00 3.68
4165 4539 0.389817 CGTCACATCTTCTCCGGCAA 60.390 55.000 0.00 0.00 0.00 4.52
4166 4540 1.215382 CGTCACATCTTCTCCGGCA 59.785 57.895 0.00 0.00 0.00 5.69
4167 4541 0.103208 ATCGTCACATCTTCTCCGGC 59.897 55.000 0.00 0.00 0.00 6.13
4168 4542 1.269309 GGATCGTCACATCTTCTCCGG 60.269 57.143 0.00 0.00 0.00 5.14
4169 4543 1.678627 AGGATCGTCACATCTTCTCCG 59.321 52.381 0.00 0.00 0.00 4.63
4170 4544 3.491792 GGAAGGATCGTCACATCTTCTCC 60.492 52.174 0.00 0.00 0.00 3.71
4171 4545 3.131223 TGGAAGGATCGTCACATCTTCTC 59.869 47.826 0.00 0.00 0.00 2.87
4172 4546 3.099905 TGGAAGGATCGTCACATCTTCT 58.900 45.455 0.00 0.00 0.00 2.85
4173 4547 3.526931 TGGAAGGATCGTCACATCTTC 57.473 47.619 0.00 0.00 0.00 2.87
4174 4548 3.981071 TTGGAAGGATCGTCACATCTT 57.019 42.857 0.00 0.00 0.00 2.40
4175 4549 3.866651 CTTTGGAAGGATCGTCACATCT 58.133 45.455 0.00 0.00 0.00 2.90
4176 4550 2.352960 GCTTTGGAAGGATCGTCACATC 59.647 50.000 0.00 0.00 0.00 3.06
4177 4551 2.290260 TGCTTTGGAAGGATCGTCACAT 60.290 45.455 0.00 0.00 0.00 3.21
4178 4552 1.071542 TGCTTTGGAAGGATCGTCACA 59.928 47.619 0.00 0.00 0.00 3.58
4179 4553 1.808411 TGCTTTGGAAGGATCGTCAC 58.192 50.000 0.00 0.00 0.00 3.67
4180 4554 2.787473 ATGCTTTGGAAGGATCGTCA 57.213 45.000 0.00 0.00 34.08 4.35
4181 4555 3.531538 TGTATGCTTTGGAAGGATCGTC 58.468 45.455 0.00 0.00 40.30 4.20
4182 4556 3.627395 TGTATGCTTTGGAAGGATCGT 57.373 42.857 0.00 0.00 40.30 3.73
4183 4557 3.941483 AGTTGTATGCTTTGGAAGGATCG 59.059 43.478 0.00 0.00 40.30 3.69
4184 4558 5.644644 CAAGTTGTATGCTTTGGAAGGATC 58.355 41.667 0.00 0.00 40.30 3.36
4185 4559 4.082026 GCAAGTTGTATGCTTTGGAAGGAT 60.082 41.667 4.48 0.52 42.57 3.24
4186 4560 3.255642 GCAAGTTGTATGCTTTGGAAGGA 59.744 43.478 4.48 0.00 40.64 3.36
4187 4561 3.005684 TGCAAGTTGTATGCTTTGGAAGG 59.994 43.478 4.48 0.00 44.14 3.46
4188 4562 4.241590 TGCAAGTTGTATGCTTTGGAAG 57.758 40.909 4.48 0.00 44.14 3.46
4189 4563 4.870123 ATGCAAGTTGTATGCTTTGGAA 57.130 36.364 5.58 0.00 44.14 3.53
4190 4564 5.009631 AGTATGCAAGTTGTATGCTTTGGA 58.990 37.500 16.67 0.00 44.14 3.53
4191 4565 5.097529 CAGTATGCAAGTTGTATGCTTTGG 58.902 41.667 19.13 7.43 44.14 3.28
4214 4588 1.376609 CTAGGTTTCGGCCACCATGC 61.377 60.000 12.97 0.00 36.67 4.06
4268 4642 1.922570 AGCCAGAACAATACGCTACG 58.077 50.000 0.00 0.00 0.00 3.51
4269 4643 3.682858 TGAAAGCCAGAACAATACGCTAC 59.317 43.478 0.00 0.00 0.00 3.58
4280 4654 3.864789 AGGAGAAACTGAAAGCCAGAA 57.135 42.857 0.00 0.00 45.78 3.02
4332 4706 4.339814 TGCTGGTCGAAACTTACCAAATTT 59.660 37.500 0.00 0.00 44.92 1.82
4380 4754 3.123804 CCGTGCAACTGGACACTATATC 58.876 50.000 2.19 0.00 36.05 1.63
4381 4755 2.764010 TCCGTGCAACTGGACACTATAT 59.236 45.455 2.19 0.00 35.25 0.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.