Multiple sequence alignment - TraesCS2B01G003900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G003900 chr2B 100.000 3549 0 0 1 3549 2106170 2109718 0.000000e+00 6554.0
1 TraesCS2B01G003900 chr2B 93.561 2578 86 26 1 2569 1987100 1989606 0.000000e+00 3768.0
2 TraesCS2B01G003900 chr2B 84.123 1077 123 24 136 1209 1981745 1982776 0.000000e+00 998.0
3 TraesCS2B01G003900 chr2B 89.180 610 59 5 1932 2540 2090797 2091400 0.000000e+00 754.0
4 TraesCS2B01G003900 chr2B 88.177 609 63 6 1932 2540 1984183 1984782 0.000000e+00 717.0
5 TraesCS2B01G003900 chr2B 92.442 344 23 2 1396 1736 2090434 2090777 4.120000e-134 488.0
6 TraesCS2B01G003900 chr2B 88.491 391 29 11 1365 1740 1972847 1973236 3.230000e-125 459.0
7 TraesCS2B01G003900 chr2B 83.463 514 59 13 1763 2267 1979354 1979850 4.180000e-124 455.0
8 TraesCS2B01G003900 chr2B 87.222 360 33 7 1389 1736 1983805 1984163 7.140000e-107 398.0
9 TraesCS2B01G003900 chr2B 82.329 498 39 20 721 1213 1983086 1983539 1.550000e-103 387.0
10 TraesCS2B01G003900 chr2B 90.688 247 19 2 1001 1243 2089981 2090227 3.420000e-85 326.0
11 TraesCS2B01G003900 chr2B 80.988 405 72 5 228 630 151622056 151622457 2.060000e-82 316.0
12 TraesCS2B01G003900 chr2B 85.948 306 14 10 3254 3549 1989801 1990087 2.070000e-77 300.0
13 TraesCS2B01G003900 chr2B 88.525 244 27 1 2345 2587 2068261 2068504 9.630000e-76 294.0
14 TraesCS2B01G003900 chr2B 94.815 135 6 1 1 135 1980226 1980093 3.590000e-50 209.0
15 TraesCS2B01G003900 chr2B 93.137 102 5 2 2988 3089 1985001 1985100 7.940000e-32 148.0
16 TraesCS2B01G003900 chr2B 93.137 102 5 2 2988 3089 2091619 2091718 7.940000e-32 148.0
17 TraesCS2B01G003900 chr2B 91.954 87 6 1 3088 3174 37108907 37108822 1.730000e-23 121.0
18 TraesCS2B01G003900 chr2B 83.333 96 8 5 3088 3176 21916001 21915907 8.170000e-12 82.4
19 TraesCS2B01G003900 chr2B 81.111 90 14 3 3088 3176 499613387 499613300 6.360000e-08 69.4
20 TraesCS2B01G003900 chr2A 90.732 615 53 2 1930 2540 5642430 5641816 0.000000e+00 817.0
21 TraesCS2B01G003900 chr2A 90.732 615 53 2 1930 2540 5652765 5653379 0.000000e+00 817.0
22 TraesCS2B01G003900 chr2A 90.909 605 52 2 1965 2569 5647410 5646809 0.000000e+00 809.0
23 TraesCS2B01G003900 chr2A 88.146 658 61 8 1883 2540 62697084 62697724 0.000000e+00 767.0
24 TraesCS2B01G003900 chr2A 89.573 422 29 9 1322 1734 5652329 5652744 4.060000e-144 521.0
25 TraesCS2B01G003900 chr2A 90.212 378 26 7 1366 1734 5642826 5642451 1.920000e-132 483.0
26 TraesCS2B01G003900 chr2A 84.855 449 33 17 1331 1756 62696292 62696728 1.520000e-113 420.0
27 TraesCS2B01G003900 chr2A 85.901 383 19 14 3178 3549 5641112 5640754 3.340000e-100 375.0
28 TraesCS2B01G003900 chr2A 79.878 492 92 6 142 630 523446871 523447358 1.570000e-93 353.0
29 TraesCS2B01G003900 chr2A 85.987 314 27 9 999 1304 5651902 5652206 1.590000e-83 320.0
30 TraesCS2B01G003900 chr2A 78.723 470 86 13 142 604 98148475 98148013 5.760000e-78 302.0
31 TraesCS2B01G003900 chr2A 89.407 236 12 6 3314 3549 62698485 62698707 5.800000e-73 285.0
32 TraesCS2B01G003900 chr2A 83.601 311 32 15 1006 1304 62695909 62696212 1.260000e-69 274.0
33 TraesCS2B01G003900 chr2A 93.750 176 7 2 3178 3350 5646163 5645989 9.770000e-66 261.0
34 TraesCS2B01G003900 chr2A 91.228 57 2 1 3380 3436 5645979 5645926 1.370000e-09 75.0
35 TraesCS2B01G003900 chr2D 83.461 786 83 27 1763 2540 7154087 7153341 0.000000e+00 688.0
36 TraesCS2B01G003900 chr2D 86.681 458 38 12 1317 1756 7154778 7154326 1.480000e-133 486.0
37 TraesCS2B01G003900 chr2D 91.855 221 12 1 999 1213 7155190 7154970 1.600000e-78 303.0
38 TraesCS2B01G003900 chr2D 82.031 384 24 17 3178 3549 7152828 7152478 5.800000e-73 285.0
39 TraesCS2B01G003900 chr2D 90.244 82 7 1 3086 3167 23166736 23166656 4.850000e-19 106.0
40 TraesCS2B01G003900 chr5B 86.932 352 30 8 1397 1738 433549144 433548799 7.190000e-102 381.0
41 TraesCS2B01G003900 chr7A 83.293 413 56 11 228 635 189713358 189712954 5.600000e-98 368.0
42 TraesCS2B01G003900 chr5D 77.756 499 104 7 139 635 239272036 239272529 2.070000e-77 300.0
43 TraesCS2B01G003900 chr5D 90.000 90 8 1 3084 3173 325476121 325476209 8.050000e-22 115.0
44 TraesCS2B01G003900 chr5A 76.800 500 107 9 135 630 524742161 524742655 4.510000e-69 272.0
45 TraesCS2B01G003900 chr7D 76.891 476 103 6 144 616 12913752 12913281 2.720000e-66 263.0
46 TraesCS2B01G003900 chr7D 88.889 90 8 2 3084 3173 347756422 347756335 3.750000e-20 110.0
47 TraesCS2B01G003900 chr6B 78.859 298 38 12 2605 2881 717938996 717938703 1.010000e-40 178.0
48 TraesCS2B01G003900 chr6D 90.698 86 7 1 3088 3173 95724064 95724148 2.900000e-21 113.0
49 TraesCS2B01G003900 chr3B 90.698 86 7 1 3088 3173 229298769 229298685 2.900000e-21 113.0
50 TraesCS2B01G003900 chr4A 100.000 35 0 0 3087 3121 10995854 10995888 8.220000e-07 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G003900 chr2B 2106170 2109718 3548 False 6554.000000 6554 100.000000 1 3549 1 chr2B.!!$F3 3548
1 TraesCS2B01G003900 chr2B 1979354 1990087 10733 False 896.375000 3768 87.245000 1 3549 8 chr2B.!!$F5 3548
2 TraesCS2B01G003900 chr2B 2089981 2091718 1737 False 429.000000 754 91.361750 1001 3089 4 chr2B.!!$F6 2088
3 TraesCS2B01G003900 chr2A 5651902 5653379 1477 False 552.666667 817 88.764000 999 2540 3 chr2A.!!$F2 1541
4 TraesCS2B01G003900 chr2A 5640754 5647410 6656 True 470.000000 817 90.455333 1366 3549 6 chr2A.!!$R2 2183
5 TraesCS2B01G003900 chr2A 62695909 62698707 2798 False 436.500000 767 86.502250 1006 3549 4 chr2A.!!$F3 2543
6 TraesCS2B01G003900 chr2D 7152478 7155190 2712 True 440.500000 688 86.007000 999 3549 4 chr2D.!!$R2 2550

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
197 2454 0.105039 CTCCGGCTACCTTCACATCC 59.895 60.0 0.0 0.0 0.0 3.51 F
1228 4234 0.036952 ATGTCAGCACCACCTTCTCG 60.037 55.0 0.0 0.0 0.0 4.04 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1451 4699 0.177604 CCAACAGGTGCTGCCAAAAA 59.822 50.0 0.0 0.0 40.61 1.94 R
3153 6967 0.030909 TACTCCCTCCGCCCCATAAA 60.031 55.0 0.0 0.0 0.00 1.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 3.012722 TCCCTTGGCCGGGTAAGG 61.013 66.667 19.29 19.29 44.95 2.69
36 37 4.815108 GGGTAAGGCGGGGCTTGG 62.815 72.222 16.71 0.00 0.00 3.61
37 38 3.723922 GGTAAGGCGGGGCTTGGA 61.724 66.667 16.71 0.00 0.00 3.53
38 39 2.124695 GTAAGGCGGGGCTTGGAG 60.125 66.667 16.71 0.00 0.00 3.86
39 40 2.285069 TAAGGCGGGGCTTGGAGA 60.285 61.111 16.71 0.00 0.00 3.71
40 41 2.666098 TAAGGCGGGGCTTGGAGAC 61.666 63.158 16.71 0.00 0.00 3.36
52 1143 1.385347 TGGAGACAACCACCACCCT 60.385 57.895 0.00 0.00 37.44 4.34
55 1146 1.411074 GGAGACAACCACCACCCTTTT 60.411 52.381 0.00 0.00 0.00 2.27
59 1150 3.025262 GACAACCACCACCCTTTTGTTA 58.975 45.455 0.00 0.00 30.60 2.41
62 1153 4.185394 CAACCACCACCCTTTTGTTAAAC 58.815 43.478 0.00 0.00 0.00 2.01
63 1154 2.767394 ACCACCACCCTTTTGTTAAACC 59.233 45.455 0.00 0.00 0.00 3.27
64 1155 3.035363 CCACCACCCTTTTGTTAAACCT 58.965 45.455 0.00 0.00 0.00 3.50
69 1160 7.276658 CACCACCCTTTTGTTAAACCTTTTAT 58.723 34.615 0.00 0.00 0.00 1.40
99 1190 9.219603 TCCTATTGACTTTTTAGAACATGTGAG 57.780 33.333 0.00 0.00 0.00 3.51
101 1192 6.633500 TTGACTTTTTAGAACATGTGAGGG 57.367 37.500 0.00 0.00 0.00 4.30
102 1193 4.518970 TGACTTTTTAGAACATGTGAGGGC 59.481 41.667 0.00 0.00 0.00 5.19
107 1198 2.789409 AGAACATGTGAGGGCTAACC 57.211 50.000 0.00 0.00 40.67 2.85
109 1200 0.690762 AACATGTGAGGGCTAACCGT 59.309 50.000 0.00 0.00 46.96 4.83
110 1201 0.690762 ACATGTGAGGGCTAACCGTT 59.309 50.000 0.00 0.00 46.96 4.44
113 1204 2.684001 TGTGAGGGCTAACCGTTATG 57.316 50.000 0.00 0.00 46.96 1.90
115 1206 0.906066 TGAGGGCTAACCGTTATGCA 59.094 50.000 12.05 0.00 46.96 3.96
117 1208 0.909623 AGGGCTAACCGTTATGCAGT 59.090 50.000 12.05 0.00 46.96 4.40
118 1209 1.280998 AGGGCTAACCGTTATGCAGTT 59.719 47.619 12.05 0.00 46.96 3.16
119 1210 1.400494 GGGCTAACCGTTATGCAGTTG 59.600 52.381 12.05 0.00 36.48 3.16
120 1211 2.352388 GGCTAACCGTTATGCAGTTGA 58.648 47.619 12.05 0.00 0.00 3.18
124 1215 0.981183 ACCGTTATGCAGTTGAGGGA 59.019 50.000 0.00 0.00 0.00 4.20
125 1216 1.349688 ACCGTTATGCAGTTGAGGGAA 59.650 47.619 0.00 0.00 0.00 3.97
126 1217 1.737793 CCGTTATGCAGTTGAGGGAAC 59.262 52.381 0.00 0.00 34.40 3.62
151 2408 0.869454 CTTGACCTCGATCTGCGCTC 60.869 60.000 9.73 0.00 40.61 5.03
156 2413 1.142748 CTCGATCTGCGCTCCCTTT 59.857 57.895 9.73 0.00 40.61 3.11
170 2427 0.179062 CCCTTTGAGATCCTGGCTCG 60.179 60.000 0.00 0.00 35.15 5.03
197 2454 0.105039 CTCCGGCTACCTTCACATCC 59.895 60.000 0.00 0.00 0.00 3.51
198 2455 0.325296 TCCGGCTACCTTCACATCCT 60.325 55.000 0.00 0.00 0.00 3.24
202 2459 1.207329 GGCTACCTTCACATCCTCGTT 59.793 52.381 0.00 0.00 0.00 3.85
208 2465 2.029020 CCTTCACATCCTCGTTGTCTCA 60.029 50.000 0.00 0.00 0.00 3.27
211 2468 2.364002 TCACATCCTCGTTGTCTCACAA 59.636 45.455 0.00 0.00 35.42 3.33
213 2470 3.748048 CACATCCTCGTTGTCTCACAATT 59.252 43.478 0.00 0.00 40.59 2.32
219 2476 2.220824 TCGTTGTCTCACAATTTGCTCG 59.779 45.455 0.00 0.00 40.59 5.03
220 2477 2.032894 CGTTGTCTCACAATTTGCTCGT 60.033 45.455 0.00 0.00 40.59 4.18
221 2478 3.546020 CGTTGTCTCACAATTTGCTCGTT 60.546 43.478 0.00 0.00 40.59 3.85
226 2483 1.262950 TCACAATTTGCTCGTTCACCG 59.737 47.619 0.00 0.00 38.13 4.94
234 2491 0.599204 GCTCGTTCACCGAACCTCAA 60.599 55.000 1.47 0.00 46.75 3.02
244 2501 0.247736 CGAACCTCAACCTCCTCCAG 59.752 60.000 0.00 0.00 0.00 3.86
254 2511 2.283173 TCCTCCAGAGCTCGCACA 60.283 61.111 8.37 0.00 0.00 4.57
257 2514 1.227205 CTCCAGAGCTCGCACATCC 60.227 63.158 8.37 0.00 0.00 3.51
258 2515 1.674764 CTCCAGAGCTCGCACATCCT 61.675 60.000 8.37 0.00 0.00 3.24
289 2546 3.148084 CCTTCTGTGGTGACGGGT 58.852 61.111 0.00 0.00 0.00 5.28
312 2569 0.321996 GCTCCCCTTTCTTCAGTCGT 59.678 55.000 0.00 0.00 0.00 4.34
319 2576 2.484770 CCTTTCTTCAGTCGTGGTTCCA 60.485 50.000 0.00 0.00 0.00 3.53
338 2595 1.069935 GCCTATGCCCGACTTCCTC 59.930 63.158 0.00 0.00 0.00 3.71
345 2602 0.458716 GCCCGACTTCCTCTTCTTCG 60.459 60.000 0.00 0.00 0.00 3.79
349 2606 3.368531 CCCGACTTCCTCTTCTTCGATTT 60.369 47.826 0.00 0.00 0.00 2.17
355 2612 4.008074 TCCTCTTCTTCGATTTGTGCTT 57.992 40.909 0.00 0.00 0.00 3.91
359 2616 3.428870 TCTTCTTCGATTTGTGCTTCGAC 59.571 43.478 0.00 0.00 43.44 4.20
361 2618 1.719246 CTTCGATTTGTGCTTCGACGA 59.281 47.619 0.00 0.00 43.44 4.20
369 2626 1.006571 TGCTTCGACGACTTGGGAC 60.007 57.895 0.00 0.00 0.00 4.46
375 2632 1.444553 GACGACTTGGGACTGCTCG 60.445 63.158 0.00 0.00 0.00 5.03
382 2639 0.984230 TTGGGACTGCTCGGAATCTT 59.016 50.000 0.00 0.00 0.00 2.40
384 2641 0.250513 GGGACTGCTCGGAATCTTGT 59.749 55.000 0.00 0.00 0.00 3.16
390 2647 1.347707 TGCTCGGAATCTTGTCAAGGT 59.652 47.619 12.66 2.12 0.00 3.50
391 2648 2.003301 GCTCGGAATCTTGTCAAGGTC 58.997 52.381 12.66 10.01 0.00 3.85
393 2650 3.664107 CTCGGAATCTTGTCAAGGTCAA 58.336 45.455 12.66 0.00 0.00 3.18
395 2652 4.456535 TCGGAATCTTGTCAAGGTCAAAA 58.543 39.130 12.66 0.00 0.00 2.44
397 2654 4.556699 CGGAATCTTGTCAAGGTCAAAACC 60.557 45.833 12.66 4.79 46.87 3.27
448 2705 1.680651 CGGGTGCCATGCCCTTTTA 60.681 57.895 5.47 0.00 43.92 1.52
449 2706 1.254284 CGGGTGCCATGCCCTTTTAA 61.254 55.000 5.47 0.00 43.92 1.52
451 2708 1.066215 GGGTGCCATGCCCTTTTAAAG 60.066 52.381 0.00 0.00 42.81 1.85
472 2730 0.530650 CGCTGTCATGGCCGTTATCT 60.531 55.000 0.00 0.00 0.00 1.98
492 2750 1.989508 TGCCCCTCTTCGAGCATCA 60.990 57.895 0.00 0.00 33.17 3.07
494 2752 1.680522 GCCCCTCTTCGAGCATCAGA 61.681 60.000 0.00 0.00 33.17 3.27
500 2758 3.186119 CTCTTCGAGCATCAGAGGAAAC 58.814 50.000 3.56 0.00 33.09 2.78
543 2801 2.660552 CGACAACGGCGTCTTGGT 60.661 61.111 15.17 9.78 33.54 3.67
545 2803 1.885850 GACAACGGCGTCTTGGTGT 60.886 57.895 15.17 14.19 32.92 4.16
556 2814 3.251004 GCGTCTTGGTGTCATTCTTCTTT 59.749 43.478 0.00 0.00 0.00 2.52
557 2815 4.261197 GCGTCTTGGTGTCATTCTTCTTTT 60.261 41.667 0.00 0.00 0.00 2.27
572 2830 2.639065 TCTTTTGTGAAGGCGTTGTCT 58.361 42.857 0.00 0.00 0.00 3.41
574 2832 2.842208 TTTGTGAAGGCGTTGTCTTG 57.158 45.000 0.00 0.00 0.00 3.02
578 2836 3.271729 TGTGAAGGCGTTGTCTTGTTTA 58.728 40.909 0.00 0.00 0.00 2.01
582 2840 2.132762 AGGCGTTGTCTTGTTTACTCG 58.867 47.619 0.00 0.00 0.00 4.18
587 2845 1.279527 TGTCTTGTTTACTCGCGGCG 61.280 55.000 17.70 17.70 0.00 6.46
592 2850 2.157073 GTTTACTCGCGGCGTCCTC 61.157 63.158 22.90 5.87 0.00 3.71
597 2855 4.547905 TCGCGGCGTCCTCGATTC 62.548 66.667 22.90 0.00 39.71 2.52
616 2874 4.806640 TTCTGGATTTGGAGATTTTGGC 57.193 40.909 0.00 0.00 0.00 4.52
617 2875 3.099141 TCTGGATTTGGAGATTTTGGCC 58.901 45.455 0.00 0.00 0.00 5.36
620 2878 3.020984 GGATTTGGAGATTTTGGCCGTA 58.979 45.455 0.00 0.00 0.00 4.02
630 2888 2.141535 TTTGGCCGTATTGTTGTTGC 57.858 45.000 0.00 0.00 0.00 4.17
631 2889 0.315568 TTGGCCGTATTGTTGTTGCC 59.684 50.000 0.00 0.00 39.33 4.52
632 2890 0.538516 TGGCCGTATTGTTGTTGCCT 60.539 50.000 0.00 0.00 39.60 4.75
633 2891 0.601057 GGCCGTATTGTTGTTGCCTT 59.399 50.000 0.00 0.00 35.99 4.35
634 2892 1.668628 GGCCGTATTGTTGTTGCCTTG 60.669 52.381 0.00 0.00 35.99 3.61
635 2893 1.000717 GCCGTATTGTTGTTGCCTTGT 60.001 47.619 0.00 0.00 0.00 3.16
636 2894 2.544903 GCCGTATTGTTGTTGCCTTGTT 60.545 45.455 0.00 0.00 0.00 2.83
637 2895 3.049206 CCGTATTGTTGTTGCCTTGTTG 58.951 45.455 0.00 0.00 0.00 3.33
644 2902 1.561643 TGTTGCCTTGTTGGTTTGGA 58.438 45.000 0.00 0.00 38.35 3.53
653 2911 4.549458 CTTGTTGGTTTGGACTGCTTATG 58.451 43.478 0.00 0.00 0.00 1.90
666 2924 0.603975 GCTTATGGGGATGGCGAGTC 60.604 60.000 0.00 0.00 0.00 3.36
684 2942 5.638234 GCGAGTCTAGTTGTGTTTTCCTATT 59.362 40.000 0.00 0.00 0.00 1.73
689 2947 9.269453 AGTCTAGTTGTGTTTTCCTATTTGTAC 57.731 33.333 0.00 0.00 0.00 2.90
691 2949 5.754778 AGTTGTGTTTTCCTATTTGTACGC 58.245 37.500 0.00 0.00 0.00 4.42
701 2959 2.882927 ATTTGTACGCCGAGCATCTA 57.117 45.000 0.00 0.00 0.00 1.98
703 2961 2.203800 TTGTACGCCGAGCATCTAAG 57.796 50.000 0.00 0.00 0.00 2.18
708 2966 0.318275 CGCCGAGCATCTAAGGTCTC 60.318 60.000 0.00 0.00 34.00 3.36
710 2968 1.000717 GCCGAGCATCTAAGGTCTCTC 60.001 57.143 0.00 0.00 34.00 3.20
713 2971 2.287547 CGAGCATCTAAGGTCTCTCTGC 60.288 54.545 0.00 0.00 34.00 4.26
753 3011 6.430000 GTCATTTGTTGTACCACCTCTTGTAT 59.570 38.462 0.00 0.00 0.00 2.29
762 3020 6.895756 TGTACCACCTCTTGTATTCACTCTAT 59.104 38.462 0.00 0.00 0.00 1.98
766 3024 7.147811 ACCACCTCTTGTATTCACTCTATCTTC 60.148 40.741 0.00 0.00 0.00 2.87
767 3025 7.069331 CCACCTCTTGTATTCACTCTATCTTCT 59.931 40.741 0.00 0.00 0.00 2.85
768 3026 8.474025 CACCTCTTGTATTCACTCTATCTTCTT 58.526 37.037 0.00 0.00 0.00 2.52
769 3027 8.691797 ACCTCTTGTATTCACTCTATCTTCTTC 58.308 37.037 0.00 0.00 0.00 2.87
770 3028 8.912988 CCTCTTGTATTCACTCTATCTTCTTCT 58.087 37.037 0.00 0.00 0.00 2.85
806 3064 6.932901 ATTGAATGATACACAAACTTTGCG 57.067 33.333 1.14 0.00 0.00 4.85
812 3070 8.810652 AATGATACACAAACTTTGCGTATTTT 57.189 26.923 13.80 9.61 38.58 1.82
815 3073 4.911053 ACACAAACTTTGCGTATTTTCGA 58.089 34.783 1.14 0.00 0.00 3.71
817 3075 5.201910 CACAAACTTTGCGTATTTTCGAGA 58.798 37.500 1.14 0.00 0.00 4.04
819 3077 5.907391 ACAAACTTTGCGTATTTTCGAGAAG 59.093 36.000 1.14 0.00 33.73 2.85
822 3080 6.295039 ACTTTGCGTATTTTCGAGAAGAAA 57.705 33.333 0.00 0.00 46.22 2.52
835 3093 7.611213 TTCGAGAAGAAAAGAAACAAACTCT 57.389 32.000 0.00 0.00 35.61 3.24
836 3094 7.611213 TCGAGAAGAAAAGAAACAAACTCTT 57.389 32.000 0.00 0.00 34.56 2.85
840 3098 8.800370 AGAAGAAAAGAAACAAACTCTTCTCT 57.200 30.769 6.37 0.00 43.41 3.10
898 3156 1.834263 CCTCTCGGACCCTCTTTCATT 59.166 52.381 0.00 0.00 0.00 2.57
903 3161 6.663953 CCTCTCGGACCCTCTTTCATTATATA 59.336 42.308 0.00 0.00 0.00 0.86
907 3165 8.345724 TCGGACCCTCTTTCATTATATAGTAC 57.654 38.462 0.00 0.00 0.00 2.73
912 3170 7.458170 ACCCTCTTTCATTATATAGTACCTGGG 59.542 40.741 0.00 0.00 0.00 4.45
915 3173 6.790461 TCTTTCATTATATAGTACCTGGGCCA 59.210 38.462 5.85 5.85 0.00 5.36
920 3178 2.795291 ATAGTACCTGGGCCATCTCA 57.205 50.000 6.72 0.00 0.00 3.27
943 3201 2.583593 GATCGAGCGCCACACTCC 60.584 66.667 2.29 0.00 0.00 3.85
944 3202 3.069980 GATCGAGCGCCACACTCCT 62.070 63.158 2.29 0.00 0.00 3.69
945 3203 2.945398 GATCGAGCGCCACACTCCTC 62.945 65.000 2.29 0.00 0.00 3.71
947 3205 3.749064 GAGCGCCACACTCCTCGA 61.749 66.667 2.29 0.00 0.00 4.04
948 3206 3.069980 GAGCGCCACACTCCTCGAT 62.070 63.158 2.29 0.00 0.00 3.59
949 3207 2.583593 GCGCCACACTCCTCGATC 60.584 66.667 0.00 0.00 0.00 3.69
950 3208 2.105128 CGCCACACTCCTCGATCC 59.895 66.667 0.00 0.00 0.00 3.36
954 3212 1.412710 GCCACACTCCTCGATCCAATA 59.587 52.381 0.00 0.00 0.00 1.90
955 3213 2.158957 GCCACACTCCTCGATCCAATAA 60.159 50.000 0.00 0.00 0.00 1.40
956 3214 3.722147 CCACACTCCTCGATCCAATAAG 58.278 50.000 0.00 0.00 0.00 1.73
958 3216 4.363999 CACACTCCTCGATCCAATAAGTC 58.636 47.826 0.00 0.00 0.00 3.01
959 3217 3.385111 ACACTCCTCGATCCAATAAGTCC 59.615 47.826 0.00 0.00 0.00 3.85
990 3248 4.452733 CGGGCCCGACCAGAACTC 62.453 72.222 41.82 0.00 42.05 3.01
997 3255 0.179108 CCGACCAGAACTCGATTCCC 60.179 60.000 0.00 0.00 38.16 3.97
1128 4133 4.097361 GCGAACCCTCTGGACCCC 62.097 72.222 0.00 0.00 34.81 4.95
1186 4191 3.842925 TTCACCCGCTTCCAGCACC 62.843 63.158 0.00 0.00 42.58 5.01
1228 4234 0.036952 ATGTCAGCACCACCTTCTCG 60.037 55.000 0.00 0.00 0.00 4.04
1243 4249 1.069765 CTCGTCCCCATCCATTCCG 59.930 63.158 0.00 0.00 0.00 4.30
1245 4251 1.227556 CGTCCCCATCCATTCCGTC 60.228 63.158 0.00 0.00 0.00 4.79
1248 4254 0.916845 TCCCCATCCATTCCGTCCAA 60.917 55.000 0.00 0.00 0.00 3.53
1250 4256 1.321474 CCCATCCATTCCGTCCAATG 58.679 55.000 0.00 0.00 34.06 2.82
1251 4257 0.670162 CCATCCATTCCGTCCAATGC 59.330 55.000 0.00 0.00 33.08 3.56
1253 4259 1.750206 CATCCATTCCGTCCAATGCAA 59.250 47.619 0.00 0.00 33.08 4.08
1254 4260 1.462616 TCCATTCCGTCCAATGCAAG 58.537 50.000 0.00 0.00 33.08 4.01
1257 4306 2.415893 CCATTCCGTCCAATGCAAGTTC 60.416 50.000 0.00 0.00 33.08 3.01
1286 4335 4.702831 AGTTTGGCAACCTATTTTTGTGG 58.297 39.130 0.00 0.00 32.70 4.17
1293 4346 4.082026 GCAACCTATTTTTGTGGCTGATCT 60.082 41.667 0.00 0.00 0.00 2.75
1308 4476 8.677300 TGTGGCTGATCTTCTGAATTTATAAAC 58.323 33.333 0.00 0.00 0.00 2.01
1359 4530 6.296026 TGATGTTTTGCCTAACTGAGTACTT 58.704 36.000 0.00 0.00 0.00 2.24
1361 4532 5.676552 TGTTTTGCCTAACTGAGTACTTCA 58.323 37.500 0.00 0.00 0.00 3.02
1362 4533 6.296026 TGTTTTGCCTAACTGAGTACTTCAT 58.704 36.000 0.00 0.00 34.68 2.57
1363 4534 6.426937 TGTTTTGCCTAACTGAGTACTTCATC 59.573 38.462 0.00 0.00 34.68 2.92
1373 4593 1.484240 AGTACTTCATCCAGCTCTGCC 59.516 52.381 0.00 0.00 0.00 4.85
1395 4621 1.805871 GCTCACTGCTGCATCCTAGAC 60.806 57.143 1.31 0.00 38.95 2.59
1413 4645 7.331026 TCCTAGACAGATGGACAACTAATTTG 58.669 38.462 0.00 0.00 41.49 2.32
1441 4673 6.238484 GGACTACATTTTGATTCATTCCTCGG 60.238 42.308 0.00 0.00 0.00 4.63
1446 4678 6.153340 ACATTTTGATTCATTCCTCGGTCATT 59.847 34.615 0.00 0.00 0.00 2.57
1447 4679 6.588719 TTTTGATTCATTCCTCGGTCATTT 57.411 33.333 0.00 0.00 0.00 2.32
1531 4791 0.968901 TCCGGATGTGTAACTCGGCT 60.969 55.000 0.00 0.00 42.15 5.52
1588 4852 3.239449 TGGATACCCGCTCAATGTCTAT 58.761 45.455 0.00 0.00 34.29 1.98
1622 4886 1.305297 AGGGACAGTCTGGATCGCA 60.305 57.895 4.53 0.00 0.00 5.10
1682 4946 3.307691 CCAGAACATCAGCTCCAAGGTAA 60.308 47.826 0.00 0.00 0.00 2.85
1750 5020 4.896482 AGTTTTACCCCAAGTGTAATTGCA 59.104 37.500 0.00 0.00 0.00 4.08
1756 5026 4.835615 ACCCCAAGTGTAATTGCAACATAA 59.164 37.500 0.00 0.00 0.00 1.90
1757 5027 5.047377 ACCCCAAGTGTAATTGCAACATAAG 60.047 40.000 0.00 0.00 0.00 1.73
1759 5029 6.151985 CCCCAAGTGTAATTGCAACATAAGTA 59.848 38.462 0.00 0.00 0.00 2.24
1760 5030 7.147915 CCCCAAGTGTAATTGCAACATAAGTAT 60.148 37.037 0.00 0.00 0.00 2.12
1787 5291 7.437748 TGCCAAGTATCTAAGAAGAGAATAGC 58.562 38.462 0.00 0.00 34.49 2.97
1788 5292 7.069950 TGCCAAGTATCTAAGAAGAGAATAGCA 59.930 37.037 0.00 0.00 34.49 3.49
1789 5293 8.093927 GCCAAGTATCTAAGAAGAGAATAGCAT 58.906 37.037 0.00 0.00 34.49 3.79
1793 5297 9.250246 AGTATCTAAGAAGAGAATAGCATACCC 57.750 37.037 0.00 0.00 34.49 3.69
1795 5299 8.677870 ATCTAAGAAGAGAATAGCATACCCAT 57.322 34.615 0.00 0.00 34.49 4.00
1826 5332 9.357161 TGTTGATTTTAAGTACCACCAATACTT 57.643 29.630 3.18 3.18 43.60 2.24
1838 5344 9.797556 GTACCACCAATACTTCAATTATTTTCC 57.202 33.333 0.00 0.00 0.00 3.13
1839 5345 8.664669 ACCACCAATACTTCAATTATTTTCCT 57.335 30.769 0.00 0.00 0.00 3.36
1840 5346 9.100197 ACCACCAATACTTCAATTATTTTCCTT 57.900 29.630 0.00 0.00 0.00 3.36
1860 5366 8.761575 TTCCTTAAATCAAGCAATTTTAGCAG 57.238 30.769 0.00 0.00 32.41 4.24
1866 5372 6.588719 ATCAAGCAATTTTAGCAGTAACCA 57.411 33.333 0.00 0.00 0.00 3.67
1868 5374 5.767665 TCAAGCAATTTTAGCAGTAACCAGA 59.232 36.000 0.00 0.00 0.00 3.86
1878 5384 3.515502 AGCAGTAACCAGAATGCTACTGA 59.484 43.478 11.29 0.00 45.90 3.41
1919 5438 6.690530 TCATTCAAACAAAGGGAGCTAAATG 58.309 36.000 0.00 0.00 0.00 2.32
1928 5447 2.835764 AGGGAGCTAAATGAACACCGTA 59.164 45.455 0.00 0.00 0.00 4.02
1930 5449 3.592059 GGAGCTAAATGAACACCGTACA 58.408 45.455 0.00 0.00 0.00 2.90
1932 5451 4.034048 GGAGCTAAATGAACACCGTACATG 59.966 45.833 0.00 0.00 0.00 3.21
1935 5454 5.472137 AGCTAAATGAACACCGTACATGTTT 59.528 36.000 2.30 0.00 40.36 2.83
1937 5456 7.335924 AGCTAAATGAACACCGTACATGTTTAT 59.664 33.333 2.30 11.15 40.36 1.40
1938 5457 7.966204 GCTAAATGAACACCGTACATGTTTATT 59.034 33.333 17.49 17.49 43.91 1.40
1939 5458 9.485591 CTAAATGAACACCGTACATGTTTATTC 57.514 33.333 20.85 8.93 42.27 1.75
1940 5459 7.441890 AATGAACACCGTACATGTTTATTCA 57.558 32.000 17.49 6.86 40.33 2.57
1941 5460 6.862711 TGAACACCGTACATGTTTATTCAA 57.137 33.333 2.30 0.00 40.36 2.69
1942 5461 7.260558 TGAACACCGTACATGTTTATTCAAA 57.739 32.000 2.30 0.00 40.36 2.69
1943 5462 7.877003 TGAACACCGTACATGTTTATTCAAAT 58.123 30.769 2.30 0.00 40.36 2.32
1944 5463 8.353684 TGAACACCGTACATGTTTATTCAAATT 58.646 29.630 2.30 0.00 40.36 1.82
1949 5468 9.834628 ACCGTACATGTTTATTCAAATTACTTG 57.165 29.630 2.30 0.00 36.25 3.16
1963 5486 7.208777 TCAAATTACTTGCTTTGCAGAATGAA 58.791 30.769 0.00 0.00 40.61 2.57
1964 5487 7.169645 TCAAATTACTTGCTTTGCAGAATGAAC 59.830 33.333 0.00 0.00 40.61 3.18
2004 5527 4.526262 CCCGAAGAGAGGACTGATGATATT 59.474 45.833 0.00 0.00 0.00 1.28
2037 5560 5.893897 ATCTTTGAAGTTGATCTGAAGGC 57.106 39.130 0.00 0.00 0.00 4.35
2074 5597 3.601443 AGAAAGGTGAATGACGAGAGG 57.399 47.619 0.00 0.00 0.00 3.69
2108 5631 5.713861 GGCTTAATGGAGATTAATGGCATCT 59.286 40.000 0.00 0.00 34.26 2.90
2109 5632 6.127786 GGCTTAATGGAGATTAATGGCATCTC 60.128 42.308 0.00 3.63 44.21 2.75
2121 5644 1.911357 TGGCATCTCCAGACTGTCATT 59.089 47.619 10.88 0.00 40.72 2.57
2135 5658 4.647611 ACTGTCATTTCCACCGAAATACA 58.352 39.130 0.00 3.87 45.08 2.29
2146 5669 4.036971 CCACCGAAATACAAGGTTCAAACA 59.963 41.667 0.00 0.00 35.85 2.83
2203 5726 6.592798 TTGAACTACACGTTTGTAAGGAAG 57.407 37.500 0.00 0.00 37.77 3.46
2206 5729 2.335316 ACACGTTTGTAAGGAAGGCA 57.665 45.000 0.00 0.00 32.60 4.75
2241 5767 2.045524 TGAGATGAGGATCCTTGAGGC 58.954 52.381 17.42 2.73 34.44 4.70
2257 5786 3.800826 GGCGGGACCTGTTGATTAT 57.199 52.632 1.33 0.00 34.51 1.28
2258 5787 2.052782 GGCGGGACCTGTTGATTATT 57.947 50.000 1.33 0.00 34.51 1.40
2259 5788 2.375146 GGCGGGACCTGTTGATTATTT 58.625 47.619 1.33 0.00 34.51 1.40
2260 5789 2.758423 GGCGGGACCTGTTGATTATTTT 59.242 45.455 1.33 0.00 34.51 1.82
2284 5813 1.058903 GAAAATCGTCGCTCGCACC 59.941 57.895 0.00 0.00 39.67 5.01
2317 5846 5.759763 TCCATGTGACATTATGCTACATGAC 59.240 40.000 28.19 3.98 42.52 3.06
2350 5879 0.107312 GGATGCTGACAGCTGGTGAT 60.107 55.000 26.94 12.57 42.97 3.06
2357 5886 0.392193 GACAGCTGGTGATGGTGGAG 60.392 60.000 19.93 0.00 37.25 3.86
2360 5889 1.448540 GCTGGTGATGGTGGAGTCG 60.449 63.158 0.00 0.00 0.00 4.18
2389 5918 2.337170 CGCCGTGTGGTCAGTGTA 59.663 61.111 0.00 0.00 37.67 2.90
2392 5921 1.076533 GCCGTGTGGTCAGTGTATCG 61.077 60.000 0.00 0.00 37.67 2.92
2407 5936 2.120232 GTATCGGTTGATGAGACGCTG 58.880 52.381 0.00 0.00 35.99 5.18
2416 5945 0.033920 ATGAGACGCTGCTGTTGACA 59.966 50.000 0.00 1.10 0.00 3.58
2424 5953 1.439353 CTGCTGTTGACAGTTGCCGT 61.439 55.000 12.32 0.00 45.45 5.68
2425 5954 1.279840 GCTGTTGACAGTTGCCGTC 59.720 57.895 12.32 0.00 45.45 4.79
2429 5958 2.243957 TTGACAGTTGCCGTCGCTG 61.244 57.895 0.00 0.00 36.11 5.18
2431 5960 4.908687 ACAGTTGCCGTCGCTGCA 62.909 61.111 0.00 0.00 36.84 4.41
2432 5961 4.081030 CAGTTGCCGTCGCTGCAG 62.081 66.667 10.11 10.11 40.35 4.41
2449 5978 2.665185 GGTGGTGTCCGCACTGTC 60.665 66.667 1.84 0.00 44.65 3.51
2466 5995 3.181469 ACTGTCGAGTTTACTCCAAAGCA 60.181 43.478 4.40 0.00 39.79 3.91
2488 6017 3.058450 CGGCAGCTATGATGAAGAGAAG 58.942 50.000 0.00 0.00 0.00 2.85
2494 6023 5.927689 CAGCTATGATGAAGAGAAGATCACC 59.072 44.000 0.00 0.00 0.00 4.02
2499 6028 2.171003 TGAAGAGAAGATCACCTGCGA 58.829 47.619 0.00 0.00 0.00 5.10
2513 6042 2.950309 ACCTGCGACGACTATAAGATGT 59.050 45.455 0.00 0.00 0.00 3.06
2553 6111 1.027357 ATTGTGCATCGCTGATTCCC 58.973 50.000 0.00 0.00 0.00 3.97
2555 6113 0.829990 TGTGCATCGCTGATTCCCTA 59.170 50.000 0.00 0.00 0.00 3.53
2569 6127 3.713826 TTCCCTATGTTCCTGGTTGAC 57.286 47.619 0.00 0.00 0.00 3.18
2570 6128 2.626785 TCCCTATGTTCCTGGTTGACA 58.373 47.619 0.00 0.00 0.00 3.58
2573 6131 3.947834 CCCTATGTTCCTGGTTGACAATC 59.052 47.826 0.00 0.00 0.00 2.67
2574 6132 4.324563 CCCTATGTTCCTGGTTGACAATCT 60.325 45.833 0.00 0.00 0.00 2.40
2575 6133 5.104527 CCCTATGTTCCTGGTTGACAATCTA 60.105 44.000 0.00 0.00 0.00 1.98
2577 6135 6.884295 CCTATGTTCCTGGTTGACAATCTAAA 59.116 38.462 0.00 0.00 0.00 1.85
2578 6136 7.557719 CCTATGTTCCTGGTTGACAATCTAAAT 59.442 37.037 0.00 0.00 0.00 1.40
2580 6138 8.877864 ATGTTCCTGGTTGACAATCTAAATTA 57.122 30.769 0.00 0.00 0.00 1.40
2581 6139 8.335532 TGTTCCTGGTTGACAATCTAAATTAG 57.664 34.615 0.00 0.00 0.00 1.73
2584 6142 8.737168 TCCTGGTTGACAATCTAAATTAGATG 57.263 34.615 15.46 11.89 44.44 2.90
2585 6143 7.283127 TCCTGGTTGACAATCTAAATTAGATGC 59.717 37.037 15.46 9.29 44.44 3.91
2586 6144 7.015226 TGGTTGACAATCTAAATTAGATGCG 57.985 36.000 15.46 12.20 44.44 4.73
2587 6145 6.038161 TGGTTGACAATCTAAATTAGATGCGG 59.962 38.462 15.46 10.90 44.44 5.69
2588 6146 6.430451 GTTGACAATCTAAATTAGATGCGGG 58.570 40.000 15.46 8.81 44.44 6.13
2591 6149 5.690865 ACAATCTAAATTAGATGCGGGGAA 58.309 37.500 15.46 0.00 44.44 3.97
2592 6150 5.531287 ACAATCTAAATTAGATGCGGGGAAC 59.469 40.000 15.46 0.00 44.44 3.62
2593 6151 4.764050 TCTAAATTAGATGCGGGGAACA 57.236 40.909 0.00 0.00 0.00 3.18
2595 6153 3.644966 AAATTAGATGCGGGGAACAGA 57.355 42.857 0.00 0.00 0.00 3.41
2596 6154 2.622064 ATTAGATGCGGGGAACAGAC 57.378 50.000 0.00 0.00 0.00 3.51
2597 6155 1.271856 TTAGATGCGGGGAACAGACA 58.728 50.000 0.00 0.00 0.00 3.41
2598 6156 1.271856 TAGATGCGGGGAACAGACAA 58.728 50.000 0.00 0.00 0.00 3.18
2599 6157 0.400213 AGATGCGGGGAACAGACAAA 59.600 50.000 0.00 0.00 0.00 2.83
2601 6159 0.110486 ATGCGGGGAACAGACAAAGT 59.890 50.000 0.00 0.00 0.00 2.66
2626 6358 4.008074 TGTGCTTTGAAGTAGGAGGAAG 57.992 45.455 0.00 0.00 0.00 3.46
2644 6389 3.123621 GGAAGAGACAAAGTGTATGTGCG 59.876 47.826 0.00 0.00 0.00 5.34
2672 6417 6.873076 ACTTTGATTTTGTTTCAGCACTTGAA 59.127 30.769 0.00 0.00 43.92 2.69
2678 6423 4.572985 TGTTTCAGCACTTGAATCTTGG 57.427 40.909 0.00 0.00 44.90 3.61
2724 6469 9.628746 AGTTTCGTTTCTTTTAACAAAAAGCTA 57.371 25.926 5.86 0.00 39.10 3.32
2794 6561 3.890756 ACATTTCTGTTGCATGGTCAGAA 59.109 39.130 15.19 15.19 43.44 3.02
2827 6602 6.771188 ATATATGTAAGTCTGCAACGCTTC 57.229 37.500 0.00 0.00 0.00 3.86
2852 6627 3.878778 AGGACAGATAACACCAGAATGC 58.121 45.455 0.00 0.00 31.97 3.56
2856 6631 2.031314 CAGATAACACCAGAATGCGCAG 59.969 50.000 18.32 3.73 31.97 5.18
2878 6672 6.461648 GCAGCTCTTCTCCTTATATGTGTGTA 60.462 42.308 0.00 0.00 0.00 2.90
2885 6679 7.247456 TCTCCTTATATGTGTGTACAAACCA 57.753 36.000 13.71 1.99 40.84 3.67
2896 6690 4.519350 TGTGTACAAACCAAACTTGTGTCA 59.481 37.500 0.00 0.00 37.56 3.58
2907 6701 5.519927 CCAAACTTGTGTCAATTCCACTTTC 59.480 40.000 6.39 0.00 33.92 2.62
2908 6702 4.552166 ACTTGTGTCAATTCCACTTTCG 57.448 40.909 6.39 0.00 33.92 3.46
2909 6703 3.315191 ACTTGTGTCAATTCCACTTTCGG 59.685 43.478 6.39 0.00 33.92 4.30
2910 6704 3.201353 TGTGTCAATTCCACTTTCGGA 57.799 42.857 6.39 0.00 33.92 4.55
2911 6705 3.750371 TGTGTCAATTCCACTTTCGGAT 58.250 40.909 6.39 0.00 34.19 4.18
2912 6706 4.141287 TGTGTCAATTCCACTTTCGGATT 58.859 39.130 6.39 0.00 34.19 3.01
2914 6708 5.943416 TGTGTCAATTCCACTTTCGGATTAT 59.057 36.000 6.39 0.00 34.19 1.28
2915 6709 7.106890 TGTGTCAATTCCACTTTCGGATTATA 58.893 34.615 6.39 0.00 34.19 0.98
2916 6710 7.773224 TGTGTCAATTCCACTTTCGGATTATAT 59.227 33.333 6.39 0.00 34.19 0.86
2968 6778 7.805163 TCATATATGAAAGAATGTGGAGGTGT 58.195 34.615 13.12 0.00 33.08 4.16
2984 6794 2.846206 AGGTGTCAGGCCTGAATGATAA 59.154 45.455 36.66 15.17 41.85 1.75
2985 6795 2.945668 GGTGTCAGGCCTGAATGATAAC 59.054 50.000 36.66 24.05 41.85 1.89
2986 6796 3.609853 GTGTCAGGCCTGAATGATAACA 58.390 45.455 36.66 24.91 41.85 2.41
2987 6797 3.624861 GTGTCAGGCCTGAATGATAACAG 59.375 47.826 36.66 4.28 41.85 3.16
2989 6799 4.164796 TGTCAGGCCTGAATGATAACAGAT 59.835 41.667 36.66 0.00 41.85 2.90
2990 6800 4.754114 GTCAGGCCTGAATGATAACAGATC 59.246 45.833 36.66 15.69 41.85 2.75
3005 6818 2.676839 ACAGATCGAGAGCTTTGCAATG 59.323 45.455 0.00 3.50 0.00 2.82
3040 6853 7.085116 TGACGTTTCAGTTAACAAAACAACAT 58.915 30.769 24.38 13.54 33.51 2.71
3062 6875 4.434713 AAATACTTGGCAAAGTTAGGCG 57.565 40.909 12.78 0.00 44.47 5.52
3071 6884 2.095919 GCAAAGTTAGGCGTAACACAGG 60.096 50.000 26.21 15.44 41.06 4.00
3088 6902 3.563808 CACAGGCAACAACAACTAAGCTA 59.436 43.478 0.00 0.00 41.41 3.32
3089 6903 3.564225 ACAGGCAACAACAACTAAGCTAC 59.436 43.478 0.00 0.00 41.41 3.58
3090 6904 3.815401 CAGGCAACAACAACTAAGCTACT 59.185 43.478 0.00 0.00 41.41 2.57
3091 6905 4.065789 AGGCAACAACAACTAAGCTACTC 58.934 43.478 0.00 0.00 41.41 2.59
3092 6906 3.188667 GGCAACAACAACTAAGCTACTCC 59.811 47.826 0.00 0.00 0.00 3.85
3093 6907 3.188667 GCAACAACAACTAAGCTACTCCC 59.811 47.826 0.00 0.00 0.00 4.30
3094 6908 4.642429 CAACAACAACTAAGCTACTCCCT 58.358 43.478 0.00 0.00 0.00 4.20
3095 6909 4.538746 ACAACAACTAAGCTACTCCCTC 57.461 45.455 0.00 0.00 0.00 4.30
3096 6910 4.161102 ACAACAACTAAGCTACTCCCTCT 58.839 43.478 0.00 0.00 0.00 3.69
3097 6911 4.021016 ACAACAACTAAGCTACTCCCTCTG 60.021 45.833 0.00 0.00 0.00 3.35
3098 6912 3.780626 ACAACTAAGCTACTCCCTCTGT 58.219 45.455 0.00 0.00 0.00 3.41
3099 6913 3.764972 ACAACTAAGCTACTCCCTCTGTC 59.235 47.826 0.00 0.00 0.00 3.51
3100 6914 4.020543 CAACTAAGCTACTCCCTCTGTCT 58.979 47.826 0.00 0.00 0.00 3.41
3101 6915 3.893521 ACTAAGCTACTCCCTCTGTCTC 58.106 50.000 0.00 0.00 0.00 3.36
3102 6916 1.757682 AAGCTACTCCCTCTGTCTCG 58.242 55.000 0.00 0.00 0.00 4.04
3103 6917 0.621609 AGCTACTCCCTCTGTCTCGT 59.378 55.000 0.00 0.00 0.00 4.18
3104 6918 1.838715 AGCTACTCCCTCTGTCTCGTA 59.161 52.381 0.00 0.00 0.00 3.43
3105 6919 2.239150 AGCTACTCCCTCTGTCTCGTAA 59.761 50.000 0.00 0.00 0.00 3.18
3106 6920 3.117813 AGCTACTCCCTCTGTCTCGTAAT 60.118 47.826 0.00 0.00 0.00 1.89
3107 6921 4.102838 AGCTACTCCCTCTGTCTCGTAATA 59.897 45.833 0.00 0.00 0.00 0.98
3108 6922 5.005094 GCTACTCCCTCTGTCTCGTAATAT 58.995 45.833 0.00 0.00 0.00 1.28
3109 6923 6.013553 AGCTACTCCCTCTGTCTCGTAATATA 60.014 42.308 0.00 0.00 0.00 0.86
3110 6924 6.654161 GCTACTCCCTCTGTCTCGTAATATAA 59.346 42.308 0.00 0.00 0.00 0.98
3111 6925 7.148373 GCTACTCCCTCTGTCTCGTAATATAAG 60.148 44.444 0.00 0.00 0.00 1.73
3112 6926 6.839454 ACTCCCTCTGTCTCGTAATATAAGA 58.161 40.000 0.00 0.00 0.00 2.10
3113 6927 7.288560 ACTCCCTCTGTCTCGTAATATAAGAA 58.711 38.462 0.00 0.00 0.00 2.52
3114 6928 7.229106 ACTCCCTCTGTCTCGTAATATAAGAAC 59.771 40.741 0.00 0.00 0.00 3.01
3115 6929 6.204301 TCCCTCTGTCTCGTAATATAAGAACG 59.796 42.308 0.00 0.00 37.96 3.95
3116 6930 6.017275 CCCTCTGTCTCGTAATATAAGAACGT 60.017 42.308 5.22 0.00 37.83 3.99
3117 6931 7.416022 CCTCTGTCTCGTAATATAAGAACGTT 58.584 38.462 0.00 0.00 37.83 3.99
3118 6932 7.914346 CCTCTGTCTCGTAATATAAGAACGTTT 59.086 37.037 0.46 0.00 37.83 3.60
3119 6933 9.286946 CTCTGTCTCGTAATATAAGAACGTTTT 57.713 33.333 0.46 0.00 37.83 2.43
3120 6934 9.630098 TCTGTCTCGTAATATAAGAACGTTTTT 57.370 29.630 9.22 9.22 37.83 1.94
3121 6935 9.882856 CTGTCTCGTAATATAAGAACGTTTTTC 57.117 33.333 7.42 0.00 37.83 2.29
3122 6936 9.409312 TGTCTCGTAATATAAGAACGTTTTTCA 57.591 29.630 7.42 0.00 37.83 2.69
3125 6939 9.195831 CTCGTAATATAAGAACGTTTTTCAAGC 57.804 33.333 7.42 0.00 37.83 4.01
3126 6940 8.928733 TCGTAATATAAGAACGTTTTTCAAGCT 58.071 29.630 7.42 0.00 37.83 3.74
3127 6941 9.537848 CGTAATATAAGAACGTTTTTCAAGCTT 57.462 29.630 7.42 4.50 32.16 3.74
3130 6944 9.744468 AATATAAGAACGTTTTTCAAGCTTTGT 57.256 25.926 7.42 0.00 0.00 2.83
3131 6945 9.744468 ATATAAGAACGTTTTTCAAGCTTTGTT 57.256 25.926 7.42 0.00 0.00 2.83
3133 6947 7.506296 AAGAACGTTTTTCAAGCTTTGTTAG 57.494 32.000 0.46 0.00 0.00 2.34
3134 6948 6.617879 AGAACGTTTTTCAAGCTTTGTTAGT 58.382 32.000 0.46 0.00 0.00 2.24
3135 6949 7.754625 AGAACGTTTTTCAAGCTTTGTTAGTA 58.245 30.769 0.46 0.00 0.00 1.82
3136 6950 8.403236 AGAACGTTTTTCAAGCTTTGTTAGTAT 58.597 29.630 0.46 0.00 0.00 2.12
3137 6951 7.908193 ACGTTTTTCAAGCTTTGTTAGTATG 57.092 32.000 0.00 0.00 0.00 2.39
3138 6952 7.699566 ACGTTTTTCAAGCTTTGTTAGTATGA 58.300 30.769 0.00 0.00 0.00 2.15
3139 6953 8.185505 ACGTTTTTCAAGCTTTGTTAGTATGAA 58.814 29.630 0.00 0.00 32.44 2.57
3140 6954 9.015577 CGTTTTTCAAGCTTTGTTAGTATGAAA 57.984 29.630 0.00 0.00 38.06 2.69
3144 6958 9.862371 TTTCAAGCTTTGTTAGTATGAAAAACA 57.138 25.926 0.00 0.00 37.49 2.83
3162 6976 8.257306 TGAAAAACATTCTTCTATTTATGGGGC 58.743 33.333 0.00 0.00 0.00 5.80
3163 6977 6.391227 AAACATTCTTCTATTTATGGGGCG 57.609 37.500 0.00 0.00 0.00 6.13
3164 6978 4.398319 ACATTCTTCTATTTATGGGGCGG 58.602 43.478 0.00 0.00 0.00 6.13
3165 6979 4.104102 ACATTCTTCTATTTATGGGGCGGA 59.896 41.667 0.00 0.00 0.00 5.54
3166 6980 4.351874 TTCTTCTATTTATGGGGCGGAG 57.648 45.455 0.00 0.00 0.00 4.63
3167 6981 2.637872 TCTTCTATTTATGGGGCGGAGG 59.362 50.000 0.00 0.00 0.00 4.30
3168 6982 1.358152 TCTATTTATGGGGCGGAGGG 58.642 55.000 0.00 0.00 0.00 4.30
3169 6983 1.132657 TCTATTTATGGGGCGGAGGGA 60.133 52.381 0.00 0.00 0.00 4.20
3170 6984 1.279271 CTATTTATGGGGCGGAGGGAG 59.721 57.143 0.00 0.00 0.00 4.30
3171 6985 0.697854 ATTTATGGGGCGGAGGGAGT 60.698 55.000 0.00 0.00 0.00 3.85
3172 6986 0.030909 TTTATGGGGCGGAGGGAGTA 60.031 55.000 0.00 0.00 0.00 2.59
3173 6987 0.471211 TTATGGGGCGGAGGGAGTAG 60.471 60.000 0.00 0.00 0.00 2.57
3174 6988 1.661990 TATGGGGCGGAGGGAGTAGT 61.662 60.000 0.00 0.00 0.00 2.73
3175 6989 1.661990 ATGGGGCGGAGGGAGTAGTA 61.662 60.000 0.00 0.00 0.00 1.82
3176 6990 1.831726 GGGGCGGAGGGAGTAGTAC 60.832 68.421 0.00 0.00 0.00 2.73
3214 7036 3.058160 CGGCAGGCCTCTTTGGTG 61.058 66.667 0.00 0.00 38.35 4.17
3222 7048 2.084546 GGCCTCTTTGGTGTCATGTAC 58.915 52.381 0.00 0.00 38.35 2.90
3312 11760 0.816825 AACCACAGCACAGCTCACAG 60.817 55.000 0.00 0.00 36.40 3.66
3506 11969 2.191128 AGGCTAGAAACTGCAGGTTG 57.809 50.000 24.56 9.02 38.29 3.77
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 2.124695 CTCCAAGCCCCGCCTTAC 60.125 66.667 0.00 0.00 0.00 2.34
26 27 3.056328 GTTGTCTCCAAGCCCCGC 61.056 66.667 0.00 0.00 0.00 6.13
30 31 1.150536 TGGTGGTTGTCTCCAAGCC 59.849 57.895 2.59 0.00 46.16 4.35
31 32 1.172812 GGTGGTGGTTGTCTCCAAGC 61.173 60.000 0.00 0.00 46.74 4.01
32 33 0.537371 GGGTGGTGGTTGTCTCCAAG 60.537 60.000 0.00 0.00 39.34 3.61
33 34 0.991355 AGGGTGGTGGTTGTCTCCAA 60.991 55.000 0.00 0.00 39.34 3.53
36 37 1.681264 CAAAAGGGTGGTGGTTGTCTC 59.319 52.381 0.00 0.00 0.00 3.36
37 38 1.006639 ACAAAAGGGTGGTGGTTGTCT 59.993 47.619 0.00 0.00 0.00 3.41
38 39 1.480789 ACAAAAGGGTGGTGGTTGTC 58.519 50.000 0.00 0.00 0.00 3.18
39 40 1.945580 AACAAAAGGGTGGTGGTTGT 58.054 45.000 0.00 0.00 33.97 3.32
40 41 4.185394 GTTTAACAAAAGGGTGGTGGTTG 58.815 43.478 0.00 0.00 0.00 3.77
41 42 3.198200 GGTTTAACAAAAGGGTGGTGGTT 59.802 43.478 0.00 0.00 0.00 3.67
42 43 2.767394 GGTTTAACAAAAGGGTGGTGGT 59.233 45.455 0.00 0.00 0.00 4.16
43 44 3.035363 AGGTTTAACAAAAGGGTGGTGG 58.965 45.455 0.00 0.00 0.00 4.61
44 45 4.746535 AAGGTTTAACAAAAGGGTGGTG 57.253 40.909 0.00 0.00 0.00 4.17
75 1166 8.454106 CCCTCACATGTTCTAAAAAGTCAATAG 58.546 37.037 0.00 0.00 0.00 1.73
84 1175 5.007682 GGTTAGCCCTCACATGTTCTAAAA 58.992 41.667 0.00 0.00 0.00 1.52
86 1177 3.369052 CGGTTAGCCCTCACATGTTCTAA 60.369 47.826 0.00 0.00 0.00 2.10
87 1178 2.167693 CGGTTAGCCCTCACATGTTCTA 59.832 50.000 0.00 0.00 0.00 2.10
89 1180 1.338769 ACGGTTAGCCCTCACATGTTC 60.339 52.381 0.00 0.00 0.00 3.18
90 1181 0.690762 ACGGTTAGCCCTCACATGTT 59.309 50.000 0.00 0.00 0.00 2.71
92 1183 2.684001 TAACGGTTAGCCCTCACATG 57.316 50.000 0.00 0.00 0.00 3.21
93 1184 2.745152 GCATAACGGTTAGCCCTCACAT 60.745 50.000 6.74 0.00 0.00 3.21
95 1186 1.296727 GCATAACGGTTAGCCCTCAC 58.703 55.000 6.74 0.00 0.00 3.51
96 1187 0.906066 TGCATAACGGTTAGCCCTCA 59.094 50.000 6.74 0.00 0.00 3.86
97 1188 1.134491 ACTGCATAACGGTTAGCCCTC 60.134 52.381 6.74 0.00 32.29 4.30
99 1190 1.400494 CAACTGCATAACGGTTAGCCC 59.600 52.381 6.74 0.00 46.47 5.19
101 1192 2.351726 CCTCAACTGCATAACGGTTAGC 59.648 50.000 6.74 10.16 46.47 3.09
102 1193 2.936498 CCCTCAACTGCATAACGGTTAG 59.064 50.000 6.74 0.00 46.47 2.34
107 1198 1.737793 GGTTCCCTCAACTGCATAACG 59.262 52.381 0.00 0.00 35.06 3.18
109 1200 1.349688 ACGGTTCCCTCAACTGCATAA 59.650 47.619 0.00 0.00 44.41 1.90
110 1201 0.981183 ACGGTTCCCTCAACTGCATA 59.019 50.000 0.00 0.00 44.41 3.14
113 1204 0.670854 GAGACGGTTCCCTCAACTGC 60.671 60.000 0.00 0.00 44.41 4.40
115 1206 1.344763 CAAGAGACGGTTCCCTCAACT 59.655 52.381 0.00 0.00 35.06 3.16
117 1208 1.343465 GTCAAGAGACGGTTCCCTCAA 59.657 52.381 0.00 0.00 34.60 3.02
118 1209 0.966920 GTCAAGAGACGGTTCCCTCA 59.033 55.000 0.00 0.00 34.60 3.86
119 1210 0.246910 GGTCAAGAGACGGTTCCCTC 59.753 60.000 0.00 0.00 45.92 4.30
120 1211 0.178929 AGGTCAAGAGACGGTTCCCT 60.179 55.000 0.00 0.00 45.92 4.20
124 1215 1.473278 GATCGAGGTCAAGAGACGGTT 59.527 52.381 0.00 0.00 45.92 4.44
125 1216 1.096416 GATCGAGGTCAAGAGACGGT 58.904 55.000 0.00 0.00 45.92 4.83
126 1217 1.064803 CAGATCGAGGTCAAGAGACGG 59.935 57.143 0.00 0.00 45.92 4.79
127 1218 1.532921 GCAGATCGAGGTCAAGAGACG 60.533 57.143 0.00 0.00 45.92 4.18
130 1221 0.869454 GCGCAGATCGAGGTCAAGAG 60.869 60.000 0.30 0.00 41.67 2.85
132 1223 0.869454 GAGCGCAGATCGAGGTCAAG 60.869 60.000 11.47 0.00 41.10 3.02
151 2408 0.179062 CGAGCCAGGATCTCAAAGGG 60.179 60.000 2.51 0.00 0.00 3.95
156 2413 2.121538 CGGACGAGCCAGGATCTCA 61.122 63.158 2.51 0.00 35.94 3.27
185 2442 3.162666 AGACAACGAGGATGTGAAGGTA 58.837 45.455 0.00 0.00 0.00 3.08
189 2446 2.364002 TGTGAGACAACGAGGATGTGAA 59.636 45.455 0.00 0.00 0.00 3.18
197 2454 3.662713 CGAGCAAATTGTGAGACAACGAG 60.663 47.826 0.00 0.00 41.40 4.18
198 2455 2.220824 CGAGCAAATTGTGAGACAACGA 59.779 45.455 0.00 0.00 41.40 3.85
202 2459 3.002246 GTGAACGAGCAAATTGTGAGACA 59.998 43.478 0.00 0.00 0.00 3.41
219 2476 1.509703 GAGGTTGAGGTTCGGTGAAC 58.490 55.000 1.09 1.09 41.32 3.18
220 2477 0.395312 GGAGGTTGAGGTTCGGTGAA 59.605 55.000 0.00 0.00 0.00 3.18
221 2478 0.471211 AGGAGGTTGAGGTTCGGTGA 60.471 55.000 0.00 0.00 0.00 4.02
226 2483 1.552792 CTCTGGAGGAGGTTGAGGTTC 59.447 57.143 0.00 0.00 38.35 3.62
268 2525 1.961277 CGTCACCACAGAAGGCACC 60.961 63.158 0.00 0.00 0.00 5.01
269 2526 1.961277 CCGTCACCACAGAAGGCAC 60.961 63.158 0.00 0.00 30.62 5.01
270 2527 2.425592 CCGTCACCACAGAAGGCA 59.574 61.111 0.00 0.00 30.62 4.75
278 2535 4.250305 AGCCACACCCGTCACCAC 62.250 66.667 0.00 0.00 0.00 4.16
280 2537 4.699522 GGAGCCACACCCGTCACC 62.700 72.222 0.00 0.00 0.00 4.02
289 2546 0.401738 CTGAAGAAAGGGGAGCCACA 59.598 55.000 0.00 0.00 0.00 4.17
312 2569 3.006677 GGGCATAGGCTGGAACCA 58.993 61.111 0.00 0.00 40.87 3.67
319 2576 1.383248 AGGAAGTCGGGCATAGGCT 60.383 57.895 0.00 0.00 40.87 4.58
345 2602 2.411547 CCAAGTCGTCGAAGCACAAATC 60.412 50.000 0.00 0.00 0.00 2.17
349 2606 1.300620 CCCAAGTCGTCGAAGCACA 60.301 57.895 0.00 0.00 0.00 4.57
355 2612 1.863662 GAGCAGTCCCAAGTCGTCGA 61.864 60.000 0.00 0.00 0.00 4.20
359 2616 2.125912 CCGAGCAGTCCCAAGTCG 60.126 66.667 0.00 0.00 0.00 4.18
361 2618 0.250513 GATTCCGAGCAGTCCCAAGT 59.749 55.000 0.00 0.00 0.00 3.16
369 2626 2.005451 CCTTGACAAGATTCCGAGCAG 58.995 52.381 16.99 0.00 0.00 4.24
375 2632 4.584743 AGGTTTTGACCTTGACAAGATTCC 59.415 41.667 16.99 8.56 36.56 3.01
382 2639 3.826524 TGCATAGGTTTTGACCTTGACA 58.173 40.909 3.08 0.00 41.12 3.58
384 2641 4.016444 GGATGCATAGGTTTTGACCTTGA 58.984 43.478 0.00 0.00 41.12 3.02
432 2689 1.066215 CCTTTAAAAGGGCATGGCACC 60.066 52.381 22.06 4.37 45.27 5.01
446 2703 1.312371 GGCCATGACAGCGCCTTTAA 61.312 55.000 2.29 0.00 39.70 1.52
448 2705 3.064324 GGCCATGACAGCGCCTTT 61.064 61.111 2.29 0.00 39.70 3.11
453 2710 0.530650 AGATAACGGCCATGACAGCG 60.531 55.000 2.24 0.00 0.00 5.18
454 2711 0.940126 CAGATAACGGCCATGACAGC 59.060 55.000 2.24 0.00 0.00 4.40
455 2712 1.935873 CACAGATAACGGCCATGACAG 59.064 52.381 2.24 0.00 0.00 3.51
456 2713 2.011548 GCACAGATAACGGCCATGACA 61.012 52.381 2.24 0.00 0.00 3.58
457 2714 0.657840 GCACAGATAACGGCCATGAC 59.342 55.000 2.24 0.00 0.00 3.06
458 2715 0.463654 GGCACAGATAACGGCCATGA 60.464 55.000 2.24 0.00 45.70 3.07
492 2750 0.325390 CCGGACCTAGGGTTTCCTCT 60.325 60.000 14.81 0.00 43.66 3.69
494 2752 0.178882 AACCGGACCTAGGGTTTCCT 60.179 55.000 14.81 0.00 43.84 3.36
530 2788 0.534203 AATGACACCAAGACGCCGTT 60.534 50.000 0.00 0.00 0.00 4.44
531 2789 0.949105 GAATGACACCAAGACGCCGT 60.949 55.000 0.00 0.00 0.00 5.68
543 2801 4.261155 CGCCTTCACAAAAGAAGAATGACA 60.261 41.667 5.34 0.00 46.18 3.58
545 2803 3.882888 ACGCCTTCACAAAAGAAGAATGA 59.117 39.130 5.34 0.00 46.18 2.57
556 2814 1.745232 ACAAGACAACGCCTTCACAA 58.255 45.000 0.00 0.00 0.00 3.33
557 2815 1.745232 AACAAGACAACGCCTTCACA 58.255 45.000 0.00 0.00 0.00 3.58
572 2830 2.023223 GGACGCCGCGAGTAAACAA 61.023 57.895 21.79 0.00 0.00 2.83
574 2832 2.126189 AGGACGCCGCGAGTAAAC 60.126 61.111 21.79 2.59 0.00 2.01
582 2840 2.956964 CAGAATCGAGGACGCCGC 60.957 66.667 0.00 0.00 39.58 6.53
587 2845 3.133003 TCTCCAAATCCAGAATCGAGGAC 59.867 47.826 0.00 0.00 36.60 3.85
592 2850 5.585390 CCAAAATCTCCAAATCCAGAATCG 58.415 41.667 0.00 0.00 0.00 3.34
594 2852 4.162888 GGCCAAAATCTCCAAATCCAGAAT 59.837 41.667 0.00 0.00 0.00 2.40
597 2855 2.159198 CGGCCAAAATCTCCAAATCCAG 60.159 50.000 2.24 0.00 0.00 3.86
616 2874 3.049206 CAACAAGGCAACAACAATACGG 58.951 45.455 0.00 0.00 41.41 4.02
617 2875 3.049206 CCAACAAGGCAACAACAATACG 58.951 45.455 0.00 0.00 41.41 3.06
620 2878 3.625649 AACCAACAAGGCAACAACAAT 57.374 38.095 0.00 0.00 43.14 2.71
630 2888 1.402787 AGCAGTCCAAACCAACAAGG 58.597 50.000 0.00 0.00 45.67 3.61
631 2889 4.549458 CATAAGCAGTCCAAACCAACAAG 58.451 43.478 0.00 0.00 0.00 3.16
632 2890 3.320541 CCATAAGCAGTCCAAACCAACAA 59.679 43.478 0.00 0.00 0.00 2.83
633 2891 2.890311 CCATAAGCAGTCCAAACCAACA 59.110 45.455 0.00 0.00 0.00 3.33
634 2892 2.231235 CCCATAAGCAGTCCAAACCAAC 59.769 50.000 0.00 0.00 0.00 3.77
635 2893 2.524306 CCCATAAGCAGTCCAAACCAA 58.476 47.619 0.00 0.00 0.00 3.67
636 2894 1.272425 CCCCATAAGCAGTCCAAACCA 60.272 52.381 0.00 0.00 0.00 3.67
637 2895 1.005450 TCCCCATAAGCAGTCCAAACC 59.995 52.381 0.00 0.00 0.00 3.27
644 2902 1.149174 CGCCATCCCCATAAGCAGT 59.851 57.895 0.00 0.00 0.00 4.40
653 2911 0.105039 CAACTAGACTCGCCATCCCC 59.895 60.000 0.00 0.00 0.00 4.81
666 2924 7.013529 GCGTACAAATAGGAAAACACAACTAG 58.986 38.462 0.00 0.00 0.00 2.57
684 2942 1.202371 CCTTAGATGCTCGGCGTACAA 60.202 52.381 6.85 0.00 0.00 2.41
689 2947 0.318275 GAGACCTTAGATGCTCGGCG 60.318 60.000 0.00 0.00 0.00 6.46
691 2949 2.293122 CAGAGAGACCTTAGATGCTCGG 59.707 54.545 0.00 0.00 32.80 4.63
708 2966 2.125350 GGACGCAAGAGGGCAGAG 60.125 66.667 0.00 0.00 43.62 3.35
710 2968 2.110967 CATGGACGCAAGAGGGCAG 61.111 63.158 0.00 0.00 43.62 4.85
713 2971 0.107508 ATGACATGGACGCAAGAGGG 60.108 55.000 0.00 0.00 43.62 4.30
795 3053 5.412526 TCTCGAAAATACGCAAAGTTTGT 57.587 34.783 16.70 0.88 0.00 2.83
799 3057 5.917541 TTCTTCTCGAAAATACGCAAAGT 57.082 34.783 0.00 0.00 0.00 2.66
812 3070 7.549488 AGAAGAGTTTGTTTCTTTTCTTCTCGA 59.451 33.333 8.34 0.00 44.38 4.04
815 3073 9.237187 AAGAGAAGAGTTTGTTTCTTTTCTTCT 57.763 29.630 12.77 12.77 45.45 2.85
819 3077 6.975197 CCCAAGAGAAGAGTTTGTTTCTTTTC 59.025 38.462 0.00 0.00 36.54 2.29
822 3080 4.339530 GCCCAAGAGAAGAGTTTGTTTCTT 59.660 41.667 0.00 0.00 37.59 2.52
823 3081 3.885901 GCCCAAGAGAAGAGTTTGTTTCT 59.114 43.478 0.00 0.00 36.41 2.52
824 3082 3.885901 AGCCCAAGAGAAGAGTTTGTTTC 59.114 43.478 0.00 0.00 0.00 2.78
829 3087 4.445557 AAGAAGCCCAAGAGAAGAGTTT 57.554 40.909 0.00 0.00 0.00 2.66
835 3093 3.319122 GCTTTGAAAGAAGCCCAAGAGAA 59.681 43.478 9.48 0.00 44.85 2.87
836 3094 2.887152 GCTTTGAAAGAAGCCCAAGAGA 59.113 45.455 9.48 0.00 44.85 3.10
891 3149 7.016153 TGGCCCAGGTACTATATAATGAAAG 57.984 40.000 0.00 0.00 36.02 2.62
898 3156 5.222463 TGTGAGATGGCCCAGGTACTATATA 60.222 44.000 0.00 0.00 36.02 0.86
903 3161 0.252696 TGTGAGATGGCCCAGGTACT 60.253 55.000 0.00 0.00 43.88 2.73
907 3165 2.273449 GGTGTGAGATGGCCCAGG 59.727 66.667 0.00 0.00 0.00 4.45
912 3170 1.592669 CGATCGGGTGTGAGATGGC 60.593 63.158 7.38 0.00 0.00 4.40
915 3173 1.736586 GCTCGATCGGGTGTGAGAT 59.263 57.895 17.85 0.00 0.00 2.75
943 3201 3.006323 CAGAGGGGACTTATTGGATCGAG 59.994 52.174 0.00 0.00 44.43 4.04
944 3202 2.965831 CAGAGGGGACTTATTGGATCGA 59.034 50.000 0.00 0.00 44.43 3.59
945 3203 2.037772 CCAGAGGGGACTTATTGGATCG 59.962 54.545 0.00 0.00 44.43 3.69
946 3204 3.778954 CCAGAGGGGACTTATTGGATC 57.221 52.381 0.00 0.00 44.43 3.36
975 3233 2.240162 AATCGAGTTCTGGTCGGGCC 62.240 60.000 0.00 0.00 38.02 5.80
981 3239 0.546747 TGGGGGAATCGAGTTCTGGT 60.547 55.000 0.00 0.00 37.01 4.00
982 3240 0.839946 ATGGGGGAATCGAGTTCTGG 59.160 55.000 0.00 0.00 37.01 3.86
983 3241 1.475751 CCATGGGGGAATCGAGTTCTG 60.476 57.143 2.85 0.00 40.01 3.02
984 3242 0.839946 CCATGGGGGAATCGAGTTCT 59.160 55.000 2.85 0.00 40.01 3.01
985 3243 0.819666 GCCATGGGGGAATCGAGTTC 60.820 60.000 15.13 0.00 40.01 3.01
990 3248 4.954970 CCGGCCATGGGGGAATCG 62.955 72.222 15.13 0.00 40.01 3.34
1128 4133 1.337821 GGTCGTAGTCGCTGAAACTG 58.662 55.000 0.00 0.00 36.96 3.16
1131 4136 1.180456 TGGGGTCGTAGTCGCTGAAA 61.180 55.000 0.00 0.00 36.96 2.69
1186 4191 4.436998 GTGGAGGTCGAGCGTGGG 62.437 72.222 9.28 0.00 0.00 4.61
1213 4218 1.374758 GGACGAGAAGGTGGTGCTG 60.375 63.158 0.00 0.00 0.00 4.41
1214 4219 2.584391 GGGACGAGAAGGTGGTGCT 61.584 63.158 0.00 0.00 0.00 4.40
1217 4222 1.229529 ATGGGGACGAGAAGGTGGT 60.230 57.895 0.00 0.00 0.00 4.16
1220 4225 0.326618 ATGGATGGGGACGAGAAGGT 60.327 55.000 0.00 0.00 0.00 3.50
1228 4234 1.148498 GGACGGAATGGATGGGGAC 59.852 63.158 0.00 0.00 0.00 4.46
1359 4530 2.588439 GCTGGCAGAGCTGGATGA 59.412 61.111 20.86 0.00 45.21 2.92
1376 4596 1.479730 TGTCTAGGATGCAGCAGTGAG 59.520 52.381 3.51 0.00 0.00 3.51
1395 4621 5.355350 GTCCTCCAAATTAGTTGTCCATCTG 59.645 44.000 0.00 0.00 35.23 2.90
1413 4645 6.830838 AGGAATGAATCAAAATGTAGTCCTCC 59.169 38.462 0.00 0.00 0.00 4.30
1451 4699 0.177604 CCAACAGGTGCTGCCAAAAA 59.822 50.000 0.00 0.00 40.61 1.94
1517 4777 6.817184 AGACAATATTAGCCGAGTTACACAT 58.183 36.000 0.00 0.00 0.00 3.21
1519 4779 5.398711 CGAGACAATATTAGCCGAGTTACAC 59.601 44.000 0.00 0.00 0.00 2.90
1531 4791 6.920817 AGCGATATTGACCGAGACAATATTA 58.079 36.000 16.23 0.74 45.14 0.98
1622 4886 3.000925 CGCTGGAATAAATAGACGCGTTT 59.999 43.478 15.53 11.28 35.22 3.60
1688 4952 7.225011 TGGAATTTACCAATTGGGGTTAAAAC 58.775 34.615 27.89 18.19 42.42 2.43
1756 5026 9.815306 TCTCTTCTTAGATACTTGGCATATACT 57.185 33.333 0.00 0.00 0.00 2.12
1790 5294 9.623000 GGTACTTAAAATCAACACTATATGGGT 57.377 33.333 0.00 0.00 0.00 4.51
1812 5318 9.797556 GGAAAATAATTGAAGTATTGGTGGTAC 57.202 33.333 0.00 0.00 0.00 3.34
1836 5342 7.895759 ACTGCTAAAATTGCTTGATTTAAGGA 58.104 30.769 0.00 0.00 36.87 3.36
1837 5343 9.638239 TTACTGCTAAAATTGCTTGATTTAAGG 57.362 29.630 0.00 0.00 36.87 2.69
1839 5345 9.418045 GGTTACTGCTAAAATTGCTTGATTTAA 57.582 29.630 0.00 0.00 0.00 1.52
1840 5346 8.580720 TGGTTACTGCTAAAATTGCTTGATTTA 58.419 29.630 0.00 0.00 0.00 1.40
1842 5348 6.991938 TGGTTACTGCTAAAATTGCTTGATT 58.008 32.000 0.00 0.00 0.00 2.57
1843 5349 6.434028 TCTGGTTACTGCTAAAATTGCTTGAT 59.566 34.615 0.00 0.00 0.00 2.57
1844 5350 5.767665 TCTGGTTACTGCTAAAATTGCTTGA 59.232 36.000 0.00 0.00 0.00 3.02
1845 5351 6.012658 TCTGGTTACTGCTAAAATTGCTTG 57.987 37.500 0.00 0.00 0.00 4.01
1846 5352 6.648879 TTCTGGTTACTGCTAAAATTGCTT 57.351 33.333 0.00 0.00 0.00 3.91
1847 5353 6.624423 CATTCTGGTTACTGCTAAAATTGCT 58.376 36.000 0.00 0.00 0.00 3.91
1848 5354 5.289434 GCATTCTGGTTACTGCTAAAATTGC 59.711 40.000 0.00 0.00 0.00 3.56
1849 5355 6.624423 AGCATTCTGGTTACTGCTAAAATTG 58.376 36.000 0.00 0.00 42.85 2.32
1850 5356 6.840780 AGCATTCTGGTTACTGCTAAAATT 57.159 33.333 0.00 0.00 42.85 1.82
1851 5357 7.066284 CAGTAGCATTCTGGTTACTGCTAAAAT 59.934 37.037 5.11 0.00 45.75 1.82
1852 5358 6.371548 CAGTAGCATTCTGGTTACTGCTAAAA 59.628 38.462 5.11 0.00 45.75 1.52
1853 5359 5.874810 CAGTAGCATTCTGGTTACTGCTAAA 59.125 40.000 5.11 0.00 45.75 1.85
1854 5360 5.186992 TCAGTAGCATTCTGGTTACTGCTAA 59.813 40.000 10.96 0.00 46.14 3.09
1855 5361 4.709886 TCAGTAGCATTCTGGTTACTGCTA 59.290 41.667 10.96 0.12 46.14 3.49
1856 5362 3.515502 TCAGTAGCATTCTGGTTACTGCT 59.484 43.478 10.96 1.90 46.14 4.24
1857 5363 3.861840 TCAGTAGCATTCTGGTTACTGC 58.138 45.455 10.96 0.00 46.14 4.40
1860 5366 9.937175 GATTAATTTCAGTAGCATTCTGGTTAC 57.063 33.333 0.00 0.00 34.15 2.50
1864 5370 8.680903 ACAAGATTAATTTCAGTAGCATTCTGG 58.319 33.333 0.00 0.00 34.15 3.86
1900 5419 5.691754 GTGTTCATTTAGCTCCCTTTGTTTG 59.308 40.000 0.00 0.00 0.00 2.93
1906 5425 2.039879 ACGGTGTTCATTTAGCTCCCTT 59.960 45.455 0.00 0.00 0.00 3.95
1907 5426 1.628846 ACGGTGTTCATTTAGCTCCCT 59.371 47.619 0.00 0.00 0.00 4.20
1908 5427 2.109425 ACGGTGTTCATTTAGCTCCC 57.891 50.000 0.00 0.00 0.00 4.30
1909 5428 3.592059 TGTACGGTGTTCATTTAGCTCC 58.408 45.455 0.00 0.00 0.00 4.70
1919 5438 8.736751 AATTTGAATAAACATGTACGGTGTTC 57.263 30.769 14.47 0.46 38.76 3.18
1930 5449 9.270640 TGCAAAGCAAGTAATTTGAATAAACAT 57.729 25.926 2.04 0.00 39.21 2.71
1932 5451 8.977505 TCTGCAAAGCAAGTAATTTGAATAAAC 58.022 29.630 2.04 0.00 38.41 2.01
1935 5454 9.142515 CATTCTGCAAAGCAAGTAATTTGAATA 57.857 29.630 2.04 0.00 38.41 1.75
1937 5456 7.208777 TCATTCTGCAAAGCAAGTAATTTGAA 58.791 30.769 2.04 0.00 38.41 2.69
1938 5457 6.747125 TCATTCTGCAAAGCAAGTAATTTGA 58.253 32.000 2.04 0.00 38.41 2.69
1939 5458 7.285788 GTTCATTCTGCAAAGCAAGTAATTTG 58.714 34.615 0.00 0.00 38.41 2.32
1940 5459 6.424812 GGTTCATTCTGCAAAGCAAGTAATTT 59.575 34.615 0.00 0.00 38.41 1.82
1941 5460 5.928264 GGTTCATTCTGCAAAGCAAGTAATT 59.072 36.000 0.00 0.00 38.41 1.40
1942 5461 5.473039 GGTTCATTCTGCAAAGCAAGTAAT 58.527 37.500 0.00 0.00 38.41 1.89
1943 5462 4.556501 CGGTTCATTCTGCAAAGCAAGTAA 60.557 41.667 0.00 0.00 38.41 2.24
1944 5463 3.058293 CGGTTCATTCTGCAAAGCAAGTA 60.058 43.478 0.00 0.00 38.41 2.24
1949 5468 2.053627 CAACGGTTCATTCTGCAAAGC 58.946 47.619 0.00 0.00 0.00 3.51
1963 5486 1.388837 GGCCAGTCAAAACCAACGGT 61.389 55.000 0.00 0.00 37.65 4.83
1964 5487 1.362355 GGCCAGTCAAAACCAACGG 59.638 57.895 0.00 0.00 0.00 4.44
2037 5560 3.328382 TTCTACCGTTCACATCCTTGG 57.672 47.619 0.00 0.00 0.00 3.61
2108 5631 1.001974 CGGTGGAAATGACAGTCTGGA 59.998 52.381 4.53 0.00 0.00 3.86
2109 5632 1.001974 TCGGTGGAAATGACAGTCTGG 59.998 52.381 4.53 0.00 0.00 3.86
2110 5633 2.455674 TCGGTGGAAATGACAGTCTG 57.544 50.000 1.31 0.00 0.00 3.51
2121 5644 4.088056 TGAACCTTGTATTTCGGTGGAA 57.912 40.909 0.00 0.00 0.00 3.53
2135 5658 5.047377 TGACAAGCTTTTCTGTTTGAACCTT 60.047 36.000 13.50 0.00 33.88 3.50
2206 5729 2.847234 TCAACGGTGCCCTCCACT 60.847 61.111 0.00 0.00 44.08 4.00
2225 5748 1.414061 CCCGCCTCAAGGATCCTCAT 61.414 60.000 16.52 0.00 37.39 2.90
2226 5749 2.066393 CCCGCCTCAAGGATCCTCA 61.066 63.158 16.52 3.76 37.39 3.86
2241 5767 5.450412 CCATGAAAATAATCAACAGGTCCCG 60.450 44.000 0.00 0.00 32.06 5.14
2258 5787 2.418628 GAGCGACGATTTTCCCATGAAA 59.581 45.455 0.00 0.00 38.69 2.69
2259 5788 2.006888 GAGCGACGATTTTCCCATGAA 58.993 47.619 0.00 0.00 0.00 2.57
2260 5789 1.651987 GAGCGACGATTTTCCCATGA 58.348 50.000 0.00 0.00 0.00 3.07
2284 5813 1.241165 TGTCACATGGAAAGCTGCTG 58.759 50.000 1.35 0.00 0.00 4.41
2321 5850 1.251251 GTCAGCATCCCAGCAAGTTT 58.749 50.000 0.00 0.00 36.85 2.66
2350 5879 0.813610 CTGTTTGCACGACTCCACCA 60.814 55.000 0.00 0.00 0.00 4.17
2389 5918 0.807667 GCAGCGTCTCATCAACCGAT 60.808 55.000 0.00 0.00 0.00 4.18
2392 5921 0.671781 ACAGCAGCGTCTCATCAACC 60.672 55.000 0.00 0.00 0.00 3.77
2424 5953 4.314440 GGACACCACCTGCAGCGA 62.314 66.667 8.66 0.00 0.00 4.93
2449 5978 1.459592 CCGTGCTTTGGAGTAAACTCG 59.540 52.381 4.13 0.00 43.76 4.18
2466 5995 2.034878 TCTCTTCATCATAGCTGCCGT 58.965 47.619 0.00 0.00 0.00 5.68
2488 6017 3.250280 TCTTATAGTCGTCGCAGGTGATC 59.750 47.826 0.00 0.00 0.00 2.92
2494 6023 3.731216 CCAACATCTTATAGTCGTCGCAG 59.269 47.826 0.00 0.00 0.00 5.18
2499 6028 5.187186 ACCTTCACCAACATCTTATAGTCGT 59.813 40.000 0.00 0.00 0.00 4.34
2553 6111 7.921786 TTTAGATTGTCAACCAGGAACATAG 57.078 36.000 0.00 0.00 0.00 2.23
2555 6113 7.781324 AATTTAGATTGTCAACCAGGAACAT 57.219 32.000 0.00 0.00 0.00 2.71
2569 6127 5.530915 TGTTCCCCGCATCTAATTTAGATTG 59.469 40.000 14.88 10.90 42.70 2.67
2570 6128 5.690865 TGTTCCCCGCATCTAATTTAGATT 58.309 37.500 14.88 0.62 42.70 2.40
2573 6131 4.511826 GTCTGTTCCCCGCATCTAATTTAG 59.488 45.833 0.00 0.00 0.00 1.85
2574 6132 4.080807 TGTCTGTTCCCCGCATCTAATTTA 60.081 41.667 0.00 0.00 0.00 1.40
2575 6133 3.279434 GTCTGTTCCCCGCATCTAATTT 58.721 45.455 0.00 0.00 0.00 1.82
2577 6135 1.837439 TGTCTGTTCCCCGCATCTAAT 59.163 47.619 0.00 0.00 0.00 1.73
2578 6136 1.271856 TGTCTGTTCCCCGCATCTAA 58.728 50.000 0.00 0.00 0.00 2.10
2580 6138 0.400213 TTTGTCTGTTCCCCGCATCT 59.600 50.000 0.00 0.00 0.00 2.90
2581 6139 0.804989 CTTTGTCTGTTCCCCGCATC 59.195 55.000 0.00 0.00 0.00 3.91
2583 6141 0.817634 CACTTTGTCTGTTCCCCGCA 60.818 55.000 0.00 0.00 0.00 5.69
2584 6142 0.818040 ACACTTTGTCTGTTCCCCGC 60.818 55.000 0.00 0.00 0.00 6.13
2585 6143 2.536761 TACACTTTGTCTGTTCCCCG 57.463 50.000 0.00 0.00 0.00 5.73
2586 6144 3.502211 CACATACACTTTGTCTGTTCCCC 59.498 47.826 0.00 0.00 35.84 4.81
2587 6145 3.058224 GCACATACACTTTGTCTGTTCCC 60.058 47.826 0.00 0.00 35.84 3.97
2588 6146 3.815401 AGCACATACACTTTGTCTGTTCC 59.185 43.478 0.00 0.00 35.84 3.62
2591 6149 5.173774 CAAAGCACATACACTTTGTCTGT 57.826 39.130 7.20 0.00 44.90 3.41
2597 6155 6.296026 TCCTACTTCAAAGCACATACACTTT 58.704 36.000 0.00 0.00 36.56 2.66
2598 6156 5.865085 TCCTACTTCAAAGCACATACACTT 58.135 37.500 0.00 0.00 0.00 3.16
2599 6157 5.482908 CTCCTACTTCAAAGCACATACACT 58.517 41.667 0.00 0.00 0.00 3.55
2601 6159 4.530553 TCCTCCTACTTCAAAGCACATACA 59.469 41.667 0.00 0.00 0.00 2.29
2607 6339 4.021016 GTCTCTTCCTCCTACTTCAAAGCA 60.021 45.833 0.00 0.00 0.00 3.91
2626 6358 3.057019 TGACGCACATACACTTTGTCTC 58.943 45.455 0.00 0.00 0.00 3.36
2644 6389 5.807011 AGTGCTGAAACAAAATCAAAGTGAC 59.193 36.000 0.00 0.00 0.00 3.67
2712 6457 5.973899 TGCCATGTCATAGCTTTTTGTTA 57.026 34.783 4.84 0.00 0.00 2.41
2724 6469 3.828921 ACTATCTGCAATGCCATGTCAT 58.171 40.909 1.53 0.00 0.00 3.06
2772 6535 3.489355 TCTGACCATGCAACAGAAATGT 58.511 40.909 11.73 0.00 37.66 2.71
2773 6536 4.508461 TTCTGACCATGCAACAGAAATG 57.492 40.909 19.08 1.36 44.16 2.32
2781 6548 9.797642 ATATAATCTTACATTCTGACCATGCAA 57.202 29.630 0.00 0.00 0.00 4.08
2810 6577 2.404215 TCAGAAGCGTTGCAGACTTAC 58.596 47.619 0.00 0.00 0.00 2.34
2811 6578 2.812358 TCAGAAGCGTTGCAGACTTA 57.188 45.000 0.00 0.00 0.00 2.24
2827 6602 4.808414 TCTGGTGTTATCTGTCCTTCAG 57.192 45.455 0.00 0.00 44.85 3.02
2852 6627 3.986572 CACATATAAGGAGAAGAGCTGCG 59.013 47.826 0.00 0.00 40.35 5.18
2856 6631 6.806751 TGTACACACATATAAGGAGAAGAGC 58.193 40.000 0.00 0.00 0.00 4.09
2857 6632 9.088512 GTTTGTACACACATATAAGGAGAAGAG 57.911 37.037 7.28 0.00 33.76 2.85
2859 6634 7.822334 TGGTTTGTACACACATATAAGGAGAAG 59.178 37.037 13.84 0.00 33.76 2.85
2862 6637 7.915293 TTGGTTTGTACACACATATAAGGAG 57.085 36.000 13.84 0.00 33.76 3.69
2869 6663 6.151312 ACACAAGTTTGGTTTGTACACACATA 59.849 34.615 13.84 0.00 36.67 2.29
2878 6672 5.175127 GGAATTGACACAAGTTTGGTTTGT 58.825 37.500 0.00 0.00 39.23 2.83
2885 6679 5.339990 CGAAAGTGGAATTGACACAAGTTT 58.660 37.500 11.25 4.68 41.21 2.66
2919 6713 8.215736 TGATGATGATGGTCAGAATGTAAGATT 58.784 33.333 0.00 0.00 37.40 2.40
2920 6714 7.742767 TGATGATGATGGTCAGAATGTAAGAT 58.257 34.615 0.00 0.00 37.40 2.40
2921 6715 7.128234 TGATGATGATGGTCAGAATGTAAGA 57.872 36.000 0.00 0.00 37.40 2.10
2922 6716 7.981102 ATGATGATGATGGTCAGAATGTAAG 57.019 36.000 0.00 0.00 37.40 2.34
2925 6719 9.614792 CATATATGATGATGATGGTCAGAATGT 57.385 33.333 6.92 0.00 37.40 2.71
2926 6720 9.832445 TCATATATGATGATGATGGTCAGAATG 57.168 33.333 11.49 0.00 37.54 2.67
2929 6723 9.886132 CTTTCATATATGATGATGATGGTCAGA 57.114 33.333 16.06 0.00 36.56 3.27
2960 6770 0.842030 ATTCAGGCCTGACACCTCCA 60.842 55.000 35.26 19.12 39.66 3.86
2968 6778 4.502087 CGATCTGTTATCATTCAGGCCTGA 60.502 45.833 32.00 32.00 37.91 3.86
2984 6794 2.462456 TTGCAAAGCTCTCGATCTGT 57.538 45.000 0.00 0.00 0.00 3.41
2985 6795 2.934553 TCATTGCAAAGCTCTCGATCTG 59.065 45.455 1.71 0.00 0.00 2.90
2986 6796 3.257469 TCATTGCAAAGCTCTCGATCT 57.743 42.857 1.71 0.00 0.00 2.75
2987 6797 3.125829 TGTTCATTGCAAAGCTCTCGATC 59.874 43.478 1.71 0.00 0.00 3.69
2989 6799 2.493035 TGTTCATTGCAAAGCTCTCGA 58.507 42.857 1.71 0.00 0.00 4.04
2990 6800 2.975410 TGTTCATTGCAAAGCTCTCG 57.025 45.000 1.71 0.00 0.00 4.04
3040 6853 5.005094 ACGCCTAACTTTGCCAAGTATTTA 58.995 37.500 3.23 0.00 42.89 1.40
3062 6875 3.775661 AGTTGTTGTTGCCTGTGTTAC 57.224 42.857 0.00 0.00 0.00 2.50
3071 6884 3.188667 GGGAGTAGCTTAGTTGTTGTTGC 59.811 47.826 0.00 0.00 0.00 4.17
3088 6902 6.839454 TCTTATATTACGAGACAGAGGGAGT 58.161 40.000 0.00 0.00 0.00 3.85
3089 6903 7.571613 CGTTCTTATATTACGAGACAGAGGGAG 60.572 44.444 0.00 0.00 37.47 4.30
3090 6904 6.204301 CGTTCTTATATTACGAGACAGAGGGA 59.796 42.308 0.00 0.00 37.47 4.20
3091 6905 6.017275 ACGTTCTTATATTACGAGACAGAGGG 60.017 42.308 0.00 0.00 38.56 4.30
3092 6906 6.957150 ACGTTCTTATATTACGAGACAGAGG 58.043 40.000 0.00 0.00 38.56 3.69
3093 6907 8.838452 AAACGTTCTTATATTACGAGACAGAG 57.162 34.615 0.00 0.00 38.56 3.35
3094 6908 9.630098 AAAAACGTTCTTATATTACGAGACAGA 57.370 29.630 0.00 0.00 38.56 3.41
3095 6909 9.882856 GAAAAACGTTCTTATATTACGAGACAG 57.117 33.333 0.00 0.00 38.56 3.51
3096 6910 9.409312 TGAAAAACGTTCTTATATTACGAGACA 57.591 29.630 0.00 0.00 38.56 3.41
3099 6913 9.195831 GCTTGAAAAACGTTCTTATATTACGAG 57.804 33.333 0.00 0.00 38.56 4.18
3100 6914 8.928733 AGCTTGAAAAACGTTCTTATATTACGA 58.071 29.630 0.00 0.00 38.56 3.43
3101 6915 9.537848 AAGCTTGAAAAACGTTCTTATATTACG 57.462 29.630 0.00 0.00 40.85 3.18
3104 6918 9.744468 ACAAAGCTTGAAAAACGTTCTTATATT 57.256 25.926 0.00 0.00 0.00 1.28
3105 6919 9.744468 AACAAAGCTTGAAAAACGTTCTTATAT 57.256 25.926 0.00 0.00 0.00 0.86
3107 6921 9.233232 CTAACAAAGCTTGAAAAACGTTCTTAT 57.767 29.630 0.00 0.00 0.00 1.73
3108 6922 8.238631 ACTAACAAAGCTTGAAAAACGTTCTTA 58.761 29.630 0.00 0.00 0.00 2.10
3109 6923 7.088272 ACTAACAAAGCTTGAAAAACGTTCTT 58.912 30.769 0.00 0.00 0.00 2.52
3110 6924 6.617879 ACTAACAAAGCTTGAAAAACGTTCT 58.382 32.000 0.00 0.00 0.00 3.01
3111 6925 6.864560 ACTAACAAAGCTTGAAAAACGTTC 57.135 33.333 0.00 0.00 0.00 3.95
3112 6926 8.185505 TCATACTAACAAAGCTTGAAAAACGTT 58.814 29.630 0.00 0.00 0.00 3.99
3113 6927 7.699566 TCATACTAACAAAGCTTGAAAAACGT 58.300 30.769 0.00 0.00 0.00 3.99
3114 6928 8.555166 TTCATACTAACAAAGCTTGAAAAACG 57.445 30.769 0.00 0.00 30.52 3.60
3118 6932 9.862371 TGTTTTTCATACTAACAAAGCTTGAAA 57.138 25.926 0.00 0.00 37.49 2.69
3136 6950 8.257306 GCCCCATAAATAGAAGAATGTTTTTCA 58.743 33.333 0.00 0.00 0.00 2.69
3137 6951 7.435192 CGCCCCATAAATAGAAGAATGTTTTTC 59.565 37.037 0.00 0.00 0.00 2.29
3138 6952 7.264947 CGCCCCATAAATAGAAGAATGTTTTT 58.735 34.615 0.00 0.00 0.00 1.94
3139 6953 6.183360 CCGCCCCATAAATAGAAGAATGTTTT 60.183 38.462 0.00 0.00 0.00 2.43
3140 6954 5.301805 CCGCCCCATAAATAGAAGAATGTTT 59.698 40.000 0.00 0.00 0.00 2.83
3141 6955 4.827284 CCGCCCCATAAATAGAAGAATGTT 59.173 41.667 0.00 0.00 0.00 2.71
3142 6956 4.104102 TCCGCCCCATAAATAGAAGAATGT 59.896 41.667 0.00 0.00 0.00 2.71
3143 6957 4.651778 TCCGCCCCATAAATAGAAGAATG 58.348 43.478 0.00 0.00 0.00 2.67
3144 6958 4.263506 CCTCCGCCCCATAAATAGAAGAAT 60.264 45.833 0.00 0.00 0.00 2.40
3145 6959 3.072476 CCTCCGCCCCATAAATAGAAGAA 59.928 47.826 0.00 0.00 0.00 2.52
3146 6960 2.637872 CCTCCGCCCCATAAATAGAAGA 59.362 50.000 0.00 0.00 0.00 2.87
3147 6961 2.290323 CCCTCCGCCCCATAAATAGAAG 60.290 54.545 0.00 0.00 0.00 2.85
3148 6962 1.702957 CCCTCCGCCCCATAAATAGAA 59.297 52.381 0.00 0.00 0.00 2.10
3149 6963 1.132657 TCCCTCCGCCCCATAAATAGA 60.133 52.381 0.00 0.00 0.00 1.98
3150 6964 1.279271 CTCCCTCCGCCCCATAAATAG 59.721 57.143 0.00 0.00 0.00 1.73
3151 6965 1.358152 CTCCCTCCGCCCCATAAATA 58.642 55.000 0.00 0.00 0.00 1.40
3152 6966 0.697854 ACTCCCTCCGCCCCATAAAT 60.698 55.000 0.00 0.00 0.00 1.40
3153 6967 0.030909 TACTCCCTCCGCCCCATAAA 60.031 55.000 0.00 0.00 0.00 1.40
3154 6968 0.471211 CTACTCCCTCCGCCCCATAA 60.471 60.000 0.00 0.00 0.00 1.90
3155 6969 1.155390 CTACTCCCTCCGCCCCATA 59.845 63.158 0.00 0.00 0.00 2.74
3156 6970 1.661990 TACTACTCCCTCCGCCCCAT 61.662 60.000 0.00 0.00 0.00 4.00
3157 6971 2.318966 TACTACTCCCTCCGCCCCA 61.319 63.158 0.00 0.00 0.00 4.96
3158 6972 1.831726 GTACTACTCCCTCCGCCCC 60.832 68.421 0.00 0.00 0.00 5.80
3159 6973 1.076485 TGTACTACTCCCTCCGCCC 60.076 63.158 0.00 0.00 0.00 6.13
3160 6974 0.395448 ACTGTACTACTCCCTCCGCC 60.395 60.000 0.00 0.00 0.00 6.13
3161 6975 1.946081 GTACTGTACTACTCCCTCCGC 59.054 57.143 10.64 0.00 0.00 5.54
3162 6976 3.272574 TGTACTGTACTACTCCCTCCG 57.727 52.381 17.98 0.00 0.00 4.63
3163 6977 5.015515 AGTTTGTACTGTACTACTCCCTCC 58.984 45.833 17.98 0.00 31.99 4.30
3164 6978 6.587206 AAGTTTGTACTGTACTACTCCCTC 57.413 41.667 17.98 2.27 34.01 4.30
3165 6979 6.552350 TCAAAGTTTGTACTGTACTACTCCCT 59.448 38.462 17.98 5.46 34.01 4.20
3166 6980 6.752168 TCAAAGTTTGTACTGTACTACTCCC 58.248 40.000 17.98 2.11 34.01 4.30
3167 6981 8.828688 ATTCAAAGTTTGTACTGTACTACTCC 57.171 34.615 17.98 3.00 34.01 3.85
3169 6983 9.826574 TCAATTCAAAGTTTGTACTGTACTACT 57.173 29.630 17.98 16.65 34.01 2.57
3172 6986 8.120465 CGTTCAATTCAAAGTTTGTACTGTACT 58.880 33.333 17.98 0.00 34.01 2.73
3173 6987 7.375017 CCGTTCAATTCAAAGTTTGTACTGTAC 59.625 37.037 15.08 10.98 34.01 2.90
3174 6988 7.411274 CCGTTCAATTCAAAGTTTGTACTGTA 58.589 34.615 15.08 0.00 34.01 2.74
3175 6989 6.262601 CCGTTCAATTCAAAGTTTGTACTGT 58.737 36.000 15.08 0.00 34.01 3.55
3176 6990 5.173131 GCCGTTCAATTCAAAGTTTGTACTG 59.827 40.000 15.08 6.43 34.01 2.74
3214 7036 4.946478 ATCTTAGCTCCCAGTACATGAC 57.054 45.455 0.00 0.00 0.00 3.06
3222 7048 6.410540 ACTTGTTAGAAATCTTAGCTCCCAG 58.589 40.000 0.00 0.00 0.00 4.45
3284 11732 0.238289 GTGCTGTGGTTCATTGTCCG 59.762 55.000 0.00 0.00 0.00 4.79
3359 11814 5.123979 GGTCTGAGGTTTTTATTGTAGCTGG 59.876 44.000 0.00 0.00 0.00 4.85
3367 11822 7.234355 AGTTGATGAGGTCTGAGGTTTTTATT 58.766 34.615 0.00 0.00 0.00 1.40
3371 11826 4.713792 AGTTGATGAGGTCTGAGGTTTT 57.286 40.909 0.00 0.00 0.00 2.43
3506 11969 4.579869 TGGTGTTCAGAAGGATTAGCTTC 58.420 43.478 0.00 0.00 0.00 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.