Multiple sequence alignment - TraesCS2B01G002800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G002800 chr2B 100.000 3287 0 0 1 3287 1748609 1751895 0.000000e+00 6071.0
1 TraesCS2B01G002800 chr2B 99.095 2430 20 2 859 3287 1764631 1767059 0.000000e+00 4364.0
2 TraesCS2B01G002800 chr2B 86.928 1071 122 10 1109 2172 1786811 1787870 0.000000e+00 1186.0
3 TraesCS2B01G002800 chr2B 89.542 153 15 1 3135 3287 194382908 194382757 3.350000e-45 193.0
4 TraesCS2B01G002800 chr2B 84.314 153 20 3 2847 2998 557994816 557994667 2.640000e-31 147.0
5 TraesCS2B01G002800 chr2B 100.000 31 0 0 1109 1139 1749690 1749720 1.270000e-04 58.4
6 TraesCS2B01G002800 chr2B 100.000 31 0 0 1082 1112 1749717 1749747 1.270000e-04 58.4
7 TraesCS2B01G002800 chr2B 100.000 31 0 0 1109 1139 1764854 1764884 1.270000e-04 58.4
8 TraesCS2B01G002800 chr2B 100.000 31 0 0 1082 1112 1764881 1764911 1.270000e-04 58.4
9 TraesCS2B01G002800 chr2D 86.696 1571 121 31 840 2381 7204092 7202581 0.000000e+00 1663.0
10 TraesCS2B01G002800 chr2D 84.348 345 40 9 2531 2862 7202590 7202247 3.160000e-85 326.0
11 TraesCS2B01G002800 chr2D 90.417 240 22 1 1543 1782 7206830 7206592 6.850000e-82 315.0
12 TraesCS2B01G002800 chr2D 74.754 610 130 17 1470 2061 37225014 37224411 5.440000e-63 252.0
13 TraesCS2B01G002800 chr2D 94.304 158 8 1 3130 3287 7202264 7202108 1.180000e-59 241.0
14 TraesCS2B01G002800 chr2D 82.699 289 32 9 2851 3128 508094383 508094664 1.180000e-59 241.0
15 TraesCS2B01G002800 chr2D 72.628 917 165 57 1214 2061 3119217 3120116 1.190000e-54 224.0
16 TraesCS2B01G002800 chr2D 88.764 178 20 0 1358 1535 7213121 7212944 5.520000e-53 219.0
17 TraesCS2B01G002800 chr4B 87.075 294 26 8 2851 3133 273957596 273957888 4.090000e-84 322.0
18 TraesCS2B01G002800 chr7B 73.843 864 160 39 1274 2086 732200871 732200023 1.930000e-72 283.0
19 TraesCS2B01G002800 chr7B 73.635 861 167 35 1274 2086 732159000 732158152 8.980000e-71 278.0
20 TraesCS2B01G002800 chr7B 89.172 157 13 4 3133 3287 734907320 734907166 3.350000e-45 193.0
21 TraesCS2B01G002800 chr7A 83.333 294 38 5 2844 3126 125276093 125275800 9.050000e-66 261.0
22 TraesCS2B01G002800 chr7A 88.608 158 14 4 3132 3287 558105332 558105487 4.330000e-44 189.0
23 TraesCS2B01G002800 chr5A 82.000 300 42 6 2851 3138 473399318 473399019 9.110000e-61 244.0
24 TraesCS2B01G002800 chr2A 82.158 241 31 4 2904 3133 448151692 448151931 2.590000e-46 196.0
25 TraesCS2B01G002800 chr1B 86.982 169 20 2 2873 3041 505112829 505112663 4.330000e-44 189.0
26 TraesCS2B01G002800 chr1B 85.207 169 23 2 1274 1441 606311106 606310939 4.360000e-39 172.0
27 TraesCS2B01G002800 chr1B 84.024 169 25 2 1274 1441 606306477 606306310 9.440000e-36 161.0
28 TraesCS2B01G002800 chr3B 88.387 155 18 0 3133 3287 521607961 521608115 1.560000e-43 187.0
29 TraesCS2B01G002800 chr3B 87.742 155 19 0 3133 3287 521474720 521474874 7.250000e-42 182.0
30 TraesCS2B01G002800 chr1D 84.024 169 25 2 1274 1441 445189427 445189260 9.440000e-36 161.0
31 TraesCS2B01G002800 chr1D 83.929 168 25 2 1275 1441 445222324 445222490 3.390000e-35 159.0
32 TraesCS2B01G002800 chr1A 82.840 169 27 2 1274 1441 540413910 540414077 2.040000e-32 150.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G002800 chr2B 1748609 1751895 3286 False 2062.60 6071 100.000000 1 3287 3 chr2B.!!$F2 3286
1 TraesCS2B01G002800 chr2B 1764631 1767059 2428 False 1493.60 4364 99.698333 859 3287 3 chr2B.!!$F3 2428
2 TraesCS2B01G002800 chr2B 1786811 1787870 1059 False 1186.00 1186 86.928000 1109 2172 1 chr2B.!!$F1 1063
3 TraesCS2B01G002800 chr2D 7202108 7206830 4722 True 636.25 1663 88.941250 840 3287 4 chr2D.!!$R3 2447
4 TraesCS2B01G002800 chr2D 37224411 37225014 603 True 252.00 252 74.754000 1470 2061 1 chr2D.!!$R2 591
5 TraesCS2B01G002800 chr2D 3119217 3120116 899 False 224.00 224 72.628000 1214 2061 1 chr2D.!!$F1 847
6 TraesCS2B01G002800 chr7B 732200023 732200871 848 True 283.00 283 73.843000 1274 2086 1 chr7B.!!$R2 812
7 TraesCS2B01G002800 chr7B 732158152 732159000 848 True 278.00 278 73.635000 1274 2086 1 chr7B.!!$R1 812

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
736 737 0.038310 AGTTGGGCTTAGTTGGCTCC 59.962 55.0 0.0 0.0 0.0 4.70 F
776 777 0.169009 GCTGAAATGACCTTCCACGC 59.831 55.0 0.0 0.0 0.0 5.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1810 3769 0.320771 AACGCAGCGAGATTCTTGGT 60.321 50.0 24.65 0.00 0.00 3.67 R
2659 4646 0.323725 AACCAGGGGCATAGCAACTG 60.324 55.0 0.00 5.53 34.96 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 4.952957 CCACCATGGTGTAATTGTATTCCA 59.047 41.667 36.62 0.00 44.02 3.53
24 25 5.598005 CCACCATGGTGTAATTGTATTCCAT 59.402 40.000 36.62 0.00 44.02 3.41
26 27 7.040478 CCACCATGGTGTAATTGTATTCCATAG 60.040 40.741 36.62 15.83 44.02 2.23
27 28 7.502226 CACCATGGTGTAATTGTATTCCATAGT 59.498 37.037 32.94 0.00 40.91 2.12
28 29 7.719633 ACCATGGTGTAATTGTATTCCATAGTC 59.280 37.037 18.99 0.00 34.49 2.59
29 30 7.174946 CCATGGTGTAATTGTATTCCATAGTCC 59.825 40.741 2.57 0.00 34.49 3.85
30 31 7.446106 TGGTGTAATTGTATTCCATAGTCCT 57.554 36.000 0.00 0.00 0.00 3.85
31 32 7.506114 TGGTGTAATTGTATTCCATAGTCCTC 58.494 38.462 0.00 0.00 0.00 3.71
32 33 7.126573 TGGTGTAATTGTATTCCATAGTCCTCA 59.873 37.037 0.00 0.00 0.00 3.86
33 34 7.990886 GGTGTAATTGTATTCCATAGTCCTCAA 59.009 37.037 0.00 0.00 0.00 3.02
34 35 9.391006 GTGTAATTGTATTCCATAGTCCTCAAA 57.609 33.333 0.00 0.00 0.00 2.69
35 36 9.967451 TGTAATTGTATTCCATAGTCCTCAAAA 57.033 29.630 0.00 0.00 0.00 2.44
39 40 9.699410 ATTGTATTCCATAGTCCTCAAAAATGA 57.301 29.630 0.00 0.00 0.00 2.57
40 41 9.527157 TTGTATTCCATAGTCCTCAAAAATGAA 57.473 29.630 0.00 0.00 0.00 2.57
41 42 9.699410 TGTATTCCATAGTCCTCAAAAATGAAT 57.301 29.630 0.00 0.00 0.00 2.57
44 45 9.699410 ATTCCATAGTCCTCAAAAATGAATACA 57.301 29.630 0.00 0.00 0.00 2.29
45 46 9.699410 TTCCATAGTCCTCAAAAATGAATACAT 57.301 29.630 0.00 0.00 38.50 2.29
46 47 9.123902 TCCATAGTCCTCAAAAATGAATACATG 57.876 33.333 0.00 0.00 36.79 3.21
47 48 9.123902 CCATAGTCCTCAAAAATGAATACATGA 57.876 33.333 0.00 0.00 36.79 3.07
75 76 6.917217 ATTTAACTTCTAGCAGCTCACATC 57.083 37.500 0.00 0.00 0.00 3.06
76 77 2.575694 ACTTCTAGCAGCTCACATCG 57.424 50.000 0.00 0.00 0.00 3.84
78 79 3.017442 ACTTCTAGCAGCTCACATCGTA 58.983 45.455 0.00 0.00 0.00 3.43
79 80 3.634448 ACTTCTAGCAGCTCACATCGTAT 59.366 43.478 0.00 0.00 0.00 3.06
80 81 4.098654 ACTTCTAGCAGCTCACATCGTATT 59.901 41.667 0.00 0.00 0.00 1.89
81 82 4.655762 TCTAGCAGCTCACATCGTATTT 57.344 40.909 0.00 0.00 0.00 1.40
82 83 5.011090 TCTAGCAGCTCACATCGTATTTT 57.989 39.130 0.00 0.00 0.00 1.82
84 85 2.096496 AGCAGCTCACATCGTATTTTGC 59.904 45.455 0.00 0.00 0.00 3.68
85 86 2.792542 GCAGCTCACATCGTATTTTGCC 60.793 50.000 0.00 0.00 0.00 4.52
87 88 2.420022 AGCTCACATCGTATTTTGCCAC 59.580 45.455 0.00 0.00 0.00 5.01
88 89 2.787723 GCTCACATCGTATTTTGCCACG 60.788 50.000 0.00 0.00 39.48 4.94
97 98 4.751098 TCGTATTTTGCCACGAAAAGTAGT 59.249 37.500 0.00 0.00 43.63 2.73
99 100 6.591062 TCGTATTTTGCCACGAAAAGTAGTAT 59.409 34.615 0.00 0.00 43.63 2.12
100 101 7.758980 TCGTATTTTGCCACGAAAAGTAGTATA 59.241 33.333 0.00 0.00 43.63 1.47
101 102 8.382130 CGTATTTTGCCACGAAAAGTAGTATAA 58.618 33.333 0.00 0.00 40.56 0.98
106 107 6.408035 TGCCACGAAAAGTAGTATAAATCCA 58.592 36.000 0.00 0.00 0.00 3.41
107 108 6.537301 TGCCACGAAAAGTAGTATAAATCCAG 59.463 38.462 0.00 0.00 0.00 3.86
108 109 6.759827 GCCACGAAAAGTAGTATAAATCCAGA 59.240 38.462 0.00 0.00 0.00 3.86
110 111 7.762615 CCACGAAAAGTAGTATAAATCCAGACA 59.237 37.037 0.00 0.00 0.00 3.41
111 112 9.314321 CACGAAAAGTAGTATAAATCCAGACAT 57.686 33.333 0.00 0.00 0.00 3.06
112 113 9.314321 ACGAAAAGTAGTATAAATCCAGACATG 57.686 33.333 0.00 0.00 0.00 3.21
116 117 8.948631 AAGTAGTATAAATCCAGACATGTGTG 57.051 34.615 15.82 15.82 0.00 3.82
117 118 8.079211 AGTAGTATAAATCCAGACATGTGTGT 57.921 34.615 20.42 5.74 42.49 3.72
118 119 9.197306 AGTAGTATAAATCCAGACATGTGTGTA 57.803 33.333 20.42 6.48 39.09 2.90
119 120 9.245962 GTAGTATAAATCCAGACATGTGTGTAC 57.754 37.037 20.42 14.48 39.09 2.90
120 121 8.079211 AGTATAAATCCAGACATGTGTGTACT 57.921 34.615 20.42 16.21 39.09 2.73
121 122 8.540388 AGTATAAATCCAGACATGTGTGTACTT 58.460 33.333 20.42 12.41 39.09 2.24
122 123 9.162764 GTATAAATCCAGACATGTGTGTACTTT 57.837 33.333 20.42 16.99 39.09 2.66
123 124 6.959639 AAATCCAGACATGTGTGTACTTTT 57.040 33.333 20.42 11.50 39.09 2.27
124 125 6.959639 AATCCAGACATGTGTGTACTTTTT 57.040 33.333 20.42 3.58 39.09 1.94
126 127 5.432645 TCCAGACATGTGTGTACTTTTTCA 58.567 37.500 20.42 0.00 39.09 2.69
127 128 5.527214 TCCAGACATGTGTGTACTTTTTCAG 59.473 40.000 20.42 2.73 39.09 3.02
128 129 5.527214 CCAGACATGTGTGTACTTTTTCAGA 59.473 40.000 20.42 0.00 39.09 3.27
129 130 6.038161 CCAGACATGTGTGTACTTTTTCAGAA 59.962 38.462 20.42 0.00 39.09 3.02
130 131 7.255242 CCAGACATGTGTGTACTTTTTCAGAAT 60.255 37.037 20.42 0.00 39.09 2.40
131 132 8.131100 CAGACATGTGTGTACTTTTTCAGAATT 58.869 33.333 14.63 0.00 39.09 2.17
132 133 8.686334 AGACATGTGTGTACTTTTTCAGAATTT 58.314 29.630 1.15 0.00 39.09 1.82
133 134 9.301153 GACATGTGTGTACTTTTTCAGAATTTT 57.699 29.630 1.15 0.00 39.09 1.82
173 174 8.499403 AAGAATTTCGAATTTTCCAAAAACCA 57.501 26.923 14.39 0.00 0.00 3.67
174 175 8.141835 AGAATTTCGAATTTTCCAAAAACCAG 57.858 30.769 14.39 0.00 0.00 4.00
175 176 6.859420 ATTTCGAATTTTCCAAAAACCAGG 57.141 33.333 0.00 0.00 0.00 4.45
176 177 3.723260 TCGAATTTTCCAAAAACCAGGC 58.277 40.909 0.00 0.00 0.00 4.85
177 178 3.386402 TCGAATTTTCCAAAAACCAGGCT 59.614 39.130 0.00 0.00 0.00 4.58
178 179 3.740832 CGAATTTTCCAAAAACCAGGCTC 59.259 43.478 0.00 0.00 0.00 4.70
180 181 2.166907 TTTCCAAAAACCAGGCTCCA 57.833 45.000 0.00 0.00 0.00 3.86
181 182 2.166907 TTCCAAAAACCAGGCTCCAA 57.833 45.000 0.00 0.00 0.00 3.53
182 183 2.166907 TCCAAAAACCAGGCTCCAAA 57.833 45.000 0.00 0.00 0.00 3.28
183 184 1.760029 TCCAAAAACCAGGCTCCAAAC 59.240 47.619 0.00 0.00 0.00 2.93
185 186 2.549926 CAAAAACCAGGCTCCAAACAC 58.450 47.619 0.00 0.00 0.00 3.32
186 187 1.859302 AAAACCAGGCTCCAAACACA 58.141 45.000 0.00 0.00 0.00 3.72
187 188 1.402787 AAACCAGGCTCCAAACACAG 58.597 50.000 0.00 0.00 0.00 3.66
188 189 0.258774 AACCAGGCTCCAAACACAGT 59.741 50.000 0.00 0.00 0.00 3.55
189 190 0.258774 ACCAGGCTCCAAACACAGTT 59.741 50.000 0.00 0.00 0.00 3.16
190 191 1.341976 ACCAGGCTCCAAACACAGTTT 60.342 47.619 0.00 0.00 0.00 2.66
191 192 2.092103 ACCAGGCTCCAAACACAGTTTA 60.092 45.455 0.00 0.00 0.00 2.01
192 193 2.955660 CCAGGCTCCAAACACAGTTTAA 59.044 45.455 0.00 0.00 0.00 1.52
193 194 3.573967 CCAGGCTCCAAACACAGTTTAAT 59.426 43.478 0.00 0.00 0.00 1.40
194 195 4.764823 CCAGGCTCCAAACACAGTTTAATA 59.235 41.667 0.00 0.00 0.00 0.98
195 196 5.335661 CCAGGCTCCAAACACAGTTTAATAC 60.336 44.000 0.00 0.00 0.00 1.89
196 197 5.473504 CAGGCTCCAAACACAGTTTAATACT 59.526 40.000 0.00 0.00 37.68 2.12
197 198 6.653320 CAGGCTCCAAACACAGTTTAATACTA 59.347 38.462 0.00 0.00 34.56 1.82
198 199 6.879458 AGGCTCCAAACACAGTTTAATACTAG 59.121 38.462 0.00 0.00 34.56 2.57
199 200 6.653740 GGCTCCAAACACAGTTTAATACTAGT 59.346 38.462 0.00 0.00 34.56 2.57
200 201 7.174426 GGCTCCAAACACAGTTTAATACTAGTT 59.826 37.037 0.00 0.00 36.44 2.24
202 203 8.611654 TCCAAACACAGTTTAATACTAGTTCC 57.388 34.615 0.00 0.00 34.85 3.62
203 204 8.212312 TCCAAACACAGTTTAATACTAGTTCCA 58.788 33.333 0.00 0.00 34.85 3.53
204 205 8.287503 CCAAACACAGTTTAATACTAGTTCCAC 58.712 37.037 0.00 0.00 34.85 4.02
205 206 7.974482 AACACAGTTTAATACTAGTTCCACC 57.026 36.000 0.00 0.00 34.56 4.61
206 207 7.069877 ACACAGTTTAATACTAGTTCCACCA 57.930 36.000 0.00 0.00 34.56 4.17
208 209 7.443272 ACACAGTTTAATACTAGTTCCACCAAC 59.557 37.037 0.00 0.00 34.56 3.77
209 210 7.442969 CACAGTTTAATACTAGTTCCACCAACA 59.557 37.037 0.00 0.00 34.21 3.33
210 211 7.660208 ACAGTTTAATACTAGTTCCACCAACAG 59.340 37.037 0.00 0.00 34.21 3.16
211 212 7.876068 CAGTTTAATACTAGTTCCACCAACAGA 59.124 37.037 0.00 0.00 34.21 3.41
213 214 4.820894 ATACTAGTTCCACCAACAGACC 57.179 45.455 0.00 0.00 37.48 3.85
214 215 2.404559 ACTAGTTCCACCAACAGACCA 58.595 47.619 0.00 0.00 37.48 4.02
215 216 2.775384 ACTAGTTCCACCAACAGACCAA 59.225 45.455 0.00 0.00 37.48 3.67
216 217 2.052782 AGTTCCACCAACAGACCAAC 57.947 50.000 0.00 0.00 37.48 3.77
218 219 2.091885 AGTTCCACCAACAGACCAACAT 60.092 45.455 0.00 0.00 37.48 2.71
219 220 3.137544 AGTTCCACCAACAGACCAACATA 59.862 43.478 0.00 0.00 37.48 2.29
220 221 3.134574 TCCACCAACAGACCAACATAC 57.865 47.619 0.00 0.00 0.00 2.39
222 223 2.549134 CCACCAACAGACCAACATACGA 60.549 50.000 0.00 0.00 0.00 3.43
225 226 3.007506 ACCAACAGACCAACATACGATCA 59.992 43.478 0.00 0.00 0.00 2.92
226 227 4.000325 CCAACAGACCAACATACGATCAA 59.000 43.478 0.00 0.00 0.00 2.57
227 228 4.454161 CCAACAGACCAACATACGATCAAA 59.546 41.667 0.00 0.00 0.00 2.69
228 229 5.123820 CCAACAGACCAACATACGATCAAAT 59.876 40.000 0.00 0.00 0.00 2.32
229 230 6.315144 CCAACAGACCAACATACGATCAAATA 59.685 38.462 0.00 0.00 0.00 1.40
230 231 7.401860 CAACAGACCAACATACGATCAAATAG 58.598 38.462 0.00 0.00 0.00 1.73
231 232 6.640518 ACAGACCAACATACGATCAAATAGT 58.359 36.000 0.00 0.00 0.00 2.12
232 233 6.535150 ACAGACCAACATACGATCAAATAGTG 59.465 38.462 0.00 0.00 0.00 2.74
233 234 6.756542 CAGACCAACATACGATCAAATAGTGA 59.243 38.462 0.00 0.00 41.67 3.41
266 267 7.698163 AATCTTATCTTCTTACCTCCCATGT 57.302 36.000 0.00 0.00 0.00 3.21
267 268 8.798975 AATCTTATCTTCTTACCTCCCATGTA 57.201 34.615 0.00 0.00 0.00 2.29
268 269 8.798975 ATCTTATCTTCTTACCTCCCATGTAA 57.201 34.615 0.00 0.00 0.00 2.41
269 270 8.618240 TCTTATCTTCTTACCTCCCATGTAAA 57.382 34.615 0.00 0.00 0.00 2.01
271 272 9.331282 CTTATCTTCTTACCTCCCATGTAAAAG 57.669 37.037 0.00 0.00 0.00 2.27
272 273 6.062258 TCTTCTTACCTCCCATGTAAAAGG 57.938 41.667 0.00 0.00 34.94 3.11
274 275 5.693769 TCTTACCTCCCATGTAAAAGGAG 57.306 43.478 7.73 7.73 45.72 3.69
278 279 3.567478 CTCCCATGTAAAAGGAGGAGG 57.433 52.381 6.98 0.00 42.98 4.30
281 282 4.440808 TCCCATGTAAAAGGAGGAGGTAA 58.559 43.478 0.00 0.00 0.00 2.85
282 283 4.473559 TCCCATGTAAAAGGAGGAGGTAAG 59.526 45.833 0.00 0.00 0.00 2.34
284 285 4.324254 CCATGTAAAAGGAGGAGGTAAGCA 60.324 45.833 0.00 0.00 0.00 3.91
285 286 4.553330 TGTAAAAGGAGGAGGTAAGCAG 57.447 45.455 0.00 0.00 0.00 4.24
287 288 3.990959 AAAAGGAGGAGGTAAGCAGAG 57.009 47.619 0.00 0.00 0.00 3.35
288 289 1.872773 AAGGAGGAGGTAAGCAGAGG 58.127 55.000 0.00 0.00 0.00 3.69
291 292 1.408969 GAGGAGGTAAGCAGAGGGAG 58.591 60.000 0.00 0.00 0.00 4.30
294 295 1.127343 GAGGTAAGCAGAGGGAGCAT 58.873 55.000 0.00 0.00 0.00 3.79
295 296 0.835941 AGGTAAGCAGAGGGAGCATG 59.164 55.000 0.00 0.00 0.00 4.06
299 300 3.370527 GGTAAGCAGAGGGAGCATGTTAA 60.371 47.826 0.00 0.00 0.00 2.01
300 301 3.439857 AAGCAGAGGGAGCATGTTAAA 57.560 42.857 0.00 0.00 0.00 1.52
302 303 3.766545 AGCAGAGGGAGCATGTTAAAAA 58.233 40.909 0.00 0.00 0.00 1.94
303 304 4.347607 AGCAGAGGGAGCATGTTAAAAAT 58.652 39.130 0.00 0.00 0.00 1.82
304 305 5.509498 AGCAGAGGGAGCATGTTAAAAATA 58.491 37.500 0.00 0.00 0.00 1.40
305 306 5.358160 AGCAGAGGGAGCATGTTAAAAATAC 59.642 40.000 0.00 0.00 0.00 1.89
306 307 5.358160 GCAGAGGGAGCATGTTAAAAATACT 59.642 40.000 0.00 0.00 0.00 2.12
308 309 6.038714 CAGAGGGAGCATGTTAAAAATACTCC 59.961 42.308 9.04 9.04 41.21 3.85
309 310 6.069381 AGAGGGAGCATGTTAAAAATACTCCT 60.069 38.462 14.26 2.57 41.57 3.69
311 312 5.007724 GGGAGCATGTTAAAAATACTCCTCG 59.992 44.000 14.26 0.00 41.57 4.63
312 313 5.007724 GGAGCATGTTAAAAATACTCCTCGG 59.992 44.000 9.86 0.00 39.30 4.63
313 314 4.335594 AGCATGTTAAAAATACTCCTCGGC 59.664 41.667 0.00 0.00 0.00 5.54
314 315 4.335594 GCATGTTAAAAATACTCCTCGGCT 59.664 41.667 0.00 0.00 0.00 5.52
315 316 5.504173 GCATGTTAAAAATACTCCTCGGCTC 60.504 44.000 0.00 0.00 0.00 4.70
320 321 8.698210 TGTTAAAAATACTCCTCGGCTCTATAA 58.302 33.333 0.00 0.00 0.00 0.98
321 322 8.976471 GTTAAAAATACTCCTCGGCTCTATAAC 58.024 37.037 0.00 0.00 0.00 1.89
322 323 6.726490 AAAATACTCCTCGGCTCTATAACA 57.274 37.500 0.00 0.00 0.00 2.41
323 324 6.726490 AAATACTCCTCGGCTCTATAACAA 57.274 37.500 0.00 0.00 0.00 2.83
324 325 5.968528 ATACTCCTCGGCTCTATAACAAG 57.031 43.478 0.00 0.00 0.00 3.16
326 327 3.381908 ACTCCTCGGCTCTATAACAAGTG 59.618 47.826 0.00 0.00 0.00 3.16
327 328 3.628008 TCCTCGGCTCTATAACAAGTGA 58.372 45.455 0.00 0.00 0.00 3.41
329 330 4.464951 TCCTCGGCTCTATAACAAGTGAAA 59.535 41.667 0.00 0.00 0.00 2.69
330 331 5.046878 TCCTCGGCTCTATAACAAGTGAAAA 60.047 40.000 0.00 0.00 0.00 2.29
331 332 5.817816 CCTCGGCTCTATAACAAGTGAAAAT 59.182 40.000 0.00 0.00 0.00 1.82
332 333 6.984474 CCTCGGCTCTATAACAAGTGAAAATA 59.016 38.462 0.00 0.00 0.00 1.40
333 334 7.042658 CCTCGGCTCTATAACAAGTGAAAATAC 60.043 40.741 0.00 0.00 0.00 1.89
334 335 7.324935 TCGGCTCTATAACAAGTGAAAATACA 58.675 34.615 0.00 0.00 0.00 2.29
335 336 7.820386 TCGGCTCTATAACAAGTGAAAATACAA 59.180 33.333 0.00 0.00 0.00 2.41
336 337 8.116753 CGGCTCTATAACAAGTGAAAATACAAG 58.883 37.037 0.00 0.00 0.00 3.16
337 338 8.947115 GGCTCTATAACAAGTGAAAATACAAGT 58.053 33.333 0.00 0.00 0.00 3.16
358 359 9.804758 ACAAGTATACAACTAATGAGACTAAGC 57.195 33.333 5.50 0.00 37.50 3.09
359 360 9.803315 CAAGTATACAACTAATGAGACTAAGCA 57.197 33.333 5.50 0.00 37.50 3.91
360 361 9.804758 AAGTATACAACTAATGAGACTAAGCAC 57.195 33.333 5.50 0.00 37.50 4.40
361 362 9.191479 AGTATACAACTAATGAGACTAAGCACT 57.809 33.333 5.50 0.00 36.36 4.40
362 363 9.453325 GTATACAACTAATGAGACTAAGCACTC 57.547 37.037 0.00 0.00 0.00 3.51
363 364 6.346477 ACAACTAATGAGACTAAGCACTCA 57.654 37.500 0.00 0.00 45.19 3.41
364 365 6.393990 ACAACTAATGAGACTAAGCACTCAG 58.606 40.000 0.00 0.00 44.50 3.35
365 366 5.004922 ACTAATGAGACTAAGCACTCAGC 57.995 43.478 0.00 0.00 44.50 4.26
377 378 3.776196 ACTCAGCAGGGAGTGTACT 57.224 52.632 5.09 0.00 46.02 2.73
378 379 1.261480 ACTCAGCAGGGAGTGTACTG 58.739 55.000 5.09 0.00 46.02 2.74
390 391 3.557264 GGAGTGTACTGCCTAAGTTGCTT 60.557 47.826 0.00 0.00 40.56 3.91
391 392 3.665190 AGTGTACTGCCTAAGTTGCTTC 58.335 45.455 0.00 0.00 40.56 3.86
393 394 2.000447 GTACTGCCTAAGTTGCTTCGG 59.000 52.381 0.00 0.00 40.56 4.30
395 396 4.303257 GCCTAAGTTGCTTCGGCT 57.697 55.556 14.62 0.00 45.20 5.52
397 398 0.673644 GCCTAAGTTGCTTCGGCTCA 60.674 55.000 14.62 0.00 45.20 4.26
399 400 2.741878 GCCTAAGTTGCTTCGGCTCATA 60.742 50.000 14.62 0.00 45.20 2.15
401 402 3.181475 CCTAAGTTGCTTCGGCTCATAGA 60.181 47.826 0.00 0.00 42.37 1.98
402 403 3.334583 AAGTTGCTTCGGCTCATAGAA 57.665 42.857 0.00 0.00 42.37 2.10
404 405 4.672587 AGTTGCTTCGGCTCATAGAATA 57.327 40.909 0.00 0.00 42.37 1.75
405 406 5.023533 AGTTGCTTCGGCTCATAGAATAA 57.976 39.130 0.00 0.00 42.37 1.40
406 407 4.811557 AGTTGCTTCGGCTCATAGAATAAC 59.188 41.667 0.00 0.00 42.37 1.89
407 408 4.672587 TGCTTCGGCTCATAGAATAACT 57.327 40.909 0.00 0.00 42.37 2.24
410 411 5.221521 TGCTTCGGCTCATAGAATAACTGAT 60.222 40.000 0.00 0.00 42.37 2.90
411 412 6.015434 TGCTTCGGCTCATAGAATAACTGATA 60.015 38.462 0.00 0.00 42.37 2.15
414 415 7.946381 TCGGCTCATAGAATAACTGATAGAT 57.054 36.000 0.00 0.00 0.00 1.98
415 416 7.766283 TCGGCTCATAGAATAACTGATAGATG 58.234 38.462 0.00 0.00 0.00 2.90
416 417 7.611855 TCGGCTCATAGAATAACTGATAGATGA 59.388 37.037 0.00 0.00 0.00 2.92
417 418 8.412456 CGGCTCATAGAATAACTGATAGATGAT 58.588 37.037 0.00 0.00 0.00 2.45
425 426 8.240682 AGAATAACTGATAGATGATAGACACGC 58.759 37.037 0.00 0.00 0.00 5.34
426 427 4.775058 ACTGATAGATGATAGACACGCC 57.225 45.455 0.00 0.00 0.00 5.68
427 428 4.402829 ACTGATAGATGATAGACACGCCT 58.597 43.478 0.00 0.00 0.00 5.52
428 429 4.457603 ACTGATAGATGATAGACACGCCTC 59.542 45.833 0.00 0.00 0.00 4.70
429 430 3.759086 TGATAGATGATAGACACGCCTCC 59.241 47.826 0.00 0.00 0.00 4.30
431 432 2.603021 AGATGATAGACACGCCTCCAT 58.397 47.619 0.00 0.00 0.00 3.41
432 433 2.968574 AGATGATAGACACGCCTCCATT 59.031 45.455 0.00 0.00 0.00 3.16
433 434 4.152647 AGATGATAGACACGCCTCCATTA 58.847 43.478 0.00 0.00 0.00 1.90
434 435 4.774726 AGATGATAGACACGCCTCCATTAT 59.225 41.667 0.00 0.00 0.00 1.28
436 437 5.290493 TGATAGACACGCCTCCATTATTT 57.710 39.130 0.00 0.00 0.00 1.40
438 439 2.919228 AGACACGCCTCCATTATTTCC 58.081 47.619 0.00 0.00 0.00 3.13
439 440 1.597663 GACACGCCTCCATTATTTCCG 59.402 52.381 0.00 0.00 0.00 4.30
440 441 1.065709 ACACGCCTCCATTATTTCCGT 60.066 47.619 0.00 0.00 0.00 4.69
441 442 2.014128 CACGCCTCCATTATTTCCGTT 58.986 47.619 0.00 0.00 0.00 4.44
444 445 3.128068 ACGCCTCCATTATTTCCGTTTTC 59.872 43.478 0.00 0.00 0.00 2.29
446 447 4.142469 CGCCTCCATTATTTCCGTTTTCTT 60.142 41.667 0.00 0.00 0.00 2.52
447 448 5.065474 CGCCTCCATTATTTCCGTTTTCTTA 59.935 40.000 0.00 0.00 0.00 2.10
451 452 9.301153 CCTCCATTATTTCCGTTTTCTTATTTG 57.699 33.333 0.00 0.00 0.00 2.32
459 460 8.623310 TTTCCGTTTTCTTATTTGAGAAACAC 57.377 30.769 0.00 2.60 43.32 3.32
462 463 7.698970 TCCGTTTTCTTATTTGAGAAACACAAC 59.301 33.333 0.00 0.00 43.32 3.32
463 464 7.486551 CCGTTTTCTTATTTGAGAAACACAACA 59.513 33.333 0.00 0.00 43.32 3.33
464 465 8.311120 CGTTTTCTTATTTGAGAAACACAACAC 58.689 33.333 0.00 0.00 43.32 3.32
465 466 9.134734 GTTTTCTTATTTGAGAAACACAACACA 57.865 29.630 0.00 0.00 43.32 3.72
466 467 8.909708 TTTCTTATTTGAGAAACACAACACAG 57.090 30.769 0.00 0.00 39.90 3.66
467 468 7.857734 TCTTATTTGAGAAACACAACACAGA 57.142 32.000 0.00 0.00 0.00 3.41
468 469 7.919690 TCTTATTTGAGAAACACAACACAGAG 58.080 34.615 0.00 0.00 0.00 3.35
469 470 4.963276 TTTGAGAAACACAACACAGAGG 57.037 40.909 0.00 0.00 0.00 3.69
470 471 3.904800 TGAGAAACACAACACAGAGGA 57.095 42.857 0.00 0.00 0.00 3.71
471 472 3.797039 TGAGAAACACAACACAGAGGAG 58.203 45.455 0.00 0.00 0.00 3.69
472 473 3.450817 TGAGAAACACAACACAGAGGAGA 59.549 43.478 0.00 0.00 0.00 3.71
473 474 4.081142 TGAGAAACACAACACAGAGGAGAA 60.081 41.667 0.00 0.00 0.00 2.87
474 475 4.192317 AGAAACACAACACAGAGGAGAAC 58.808 43.478 0.00 0.00 0.00 3.01
475 476 2.225068 ACACAACACAGAGGAGAACG 57.775 50.000 0.00 0.00 0.00 3.95
476 477 0.861837 CACAACACAGAGGAGAACGC 59.138 55.000 0.00 0.00 0.00 4.84
479 480 1.040646 AACACAGAGGAGAACGCTCA 58.959 50.000 0.00 0.00 43.14 4.26
480 481 0.315568 ACACAGAGGAGAACGCTCAC 59.684 55.000 0.00 0.00 43.14 3.51
481 482 0.315251 CACAGAGGAGAACGCTCACA 59.685 55.000 0.00 0.00 43.14 3.58
483 484 1.269831 ACAGAGGAGAACGCTCACAAC 60.270 52.381 0.00 0.00 43.14 3.32
485 486 1.620819 AGAGGAGAACGCTCACAACAT 59.379 47.619 0.00 0.00 43.14 2.71
486 487 1.728971 GAGGAGAACGCTCACAACATG 59.271 52.381 0.00 0.00 43.14 3.21
487 488 1.344438 AGGAGAACGCTCACAACATGA 59.656 47.619 0.00 0.00 43.14 3.07
489 490 2.744202 GGAGAACGCTCACAACATGAAT 59.256 45.455 0.00 0.00 43.14 2.57
494 495 5.232202 AGAACGCTCACAACATGAATATACG 59.768 40.000 0.00 0.00 36.69 3.06
495 496 3.245284 ACGCTCACAACATGAATATACGC 59.755 43.478 0.00 0.00 36.69 4.42
496 497 3.245048 CGCTCACAACATGAATATACGCA 59.755 43.478 0.00 0.00 36.69 5.24
497 498 4.518217 GCTCACAACATGAATATACGCAC 58.482 43.478 0.00 0.00 36.69 5.34
498 499 4.033932 GCTCACAACATGAATATACGCACA 59.966 41.667 0.00 0.00 36.69 4.57
499 500 5.277490 GCTCACAACATGAATATACGCACAT 60.277 40.000 0.00 0.00 36.69 3.21
500 501 6.073819 GCTCACAACATGAATATACGCACATA 60.074 38.462 0.00 0.00 36.69 2.29
502 503 7.626446 TCACAACATGAATATACGCACATAAC 58.374 34.615 0.00 0.00 33.02 1.89
505 506 5.865085 ACATGAATATACGCACATAACCCT 58.135 37.500 0.00 0.00 0.00 4.34
506 507 6.999950 ACATGAATATACGCACATAACCCTA 58.000 36.000 0.00 0.00 0.00 3.53
508 509 5.786311 TGAATATACGCACATAACCCTACC 58.214 41.667 0.00 0.00 0.00 3.18
509 510 5.541101 TGAATATACGCACATAACCCTACCT 59.459 40.000 0.00 0.00 0.00 3.08
511 512 1.861982 ACGCACATAACCCTACCTCT 58.138 50.000 0.00 0.00 0.00 3.69
512 513 3.022557 ACGCACATAACCCTACCTCTA 57.977 47.619 0.00 0.00 0.00 2.43
513 514 3.573695 ACGCACATAACCCTACCTCTAT 58.426 45.455 0.00 0.00 0.00 1.98
514 515 3.321111 ACGCACATAACCCTACCTCTATG 59.679 47.826 0.00 0.00 0.00 2.23
517 518 4.561734 GCACATAACCCTACCTCTATGAGC 60.562 50.000 0.00 0.00 33.38 4.26
519 520 5.247110 CACATAACCCTACCTCTATGAGCAT 59.753 44.000 0.00 0.00 0.00 3.79
520 521 5.482175 ACATAACCCTACCTCTATGAGCATC 59.518 44.000 0.00 0.00 0.00 3.91
521 522 3.913370 ACCCTACCTCTATGAGCATCT 57.087 47.619 0.00 0.00 34.92 2.90
523 524 4.561752 ACCCTACCTCTATGAGCATCTTT 58.438 43.478 0.00 0.00 34.92 2.52
524 525 4.971924 ACCCTACCTCTATGAGCATCTTTT 59.028 41.667 0.00 0.00 34.92 2.27
525 526 6.143915 ACCCTACCTCTATGAGCATCTTTTA 58.856 40.000 0.00 0.00 34.92 1.52
528 529 7.309744 CCCTACCTCTATGAGCATCTTTTAGAG 60.310 44.444 0.00 0.00 38.47 2.43
530 531 7.854166 ACCTCTATGAGCATCTTTTAGAGAT 57.146 36.000 8.18 0.00 46.12 2.75
531 532 8.261349 ACCTCTATGAGCATCTTTTAGAGATT 57.739 34.615 8.18 0.00 42.55 2.40
532 533 8.149647 ACCTCTATGAGCATCTTTTAGAGATTG 58.850 37.037 8.18 0.00 42.55 2.67
533 534 8.366401 CCTCTATGAGCATCTTTTAGAGATTGA 58.634 37.037 8.18 0.00 42.55 2.57
536 537 6.992063 TGAGCATCTTTTAGAGATTGAACC 57.008 37.500 0.00 0.00 42.55 3.62
537 538 5.882557 TGAGCATCTTTTAGAGATTGAACCC 59.117 40.000 0.00 0.00 42.55 4.11
538 539 5.819991 AGCATCTTTTAGAGATTGAACCCA 58.180 37.500 0.00 0.00 42.55 4.51
539 540 6.430007 AGCATCTTTTAGAGATTGAACCCAT 58.570 36.000 0.00 0.00 42.55 4.00
541 542 8.223330 AGCATCTTTTAGAGATTGAACCCATAT 58.777 33.333 0.00 0.00 42.55 1.78
567 568 8.668510 ATTTTGAGATTATGAAGTCGCTACAT 57.331 30.769 0.00 0.00 0.00 2.29
569 570 4.984785 TGAGATTATGAAGTCGCTACATGC 59.015 41.667 0.00 0.00 38.57 4.06
578 579 2.661866 GCTACATGCGCCCGGTAG 60.662 66.667 19.76 19.76 38.00 3.18
579 580 2.812499 CTACATGCGCCCGGTAGT 59.188 61.111 17.22 5.67 31.96 2.73
580 581 1.143183 CTACATGCGCCCGGTAGTT 59.857 57.895 17.22 0.00 31.96 2.24
581 582 0.386476 CTACATGCGCCCGGTAGTTA 59.614 55.000 17.22 0.00 31.96 2.24
582 583 0.822811 TACATGCGCCCGGTAGTTAA 59.177 50.000 4.18 0.00 0.00 2.01
584 585 1.519898 ATGCGCCCGGTAGTTAACG 60.520 57.895 4.18 0.00 0.00 3.18
591 592 2.352814 CGGTAGTTAACGGACACGC 58.647 57.895 13.54 0.00 46.04 5.34
594 595 1.404583 GGTAGTTAACGGACACGCCAT 60.405 52.381 13.54 0.00 46.04 4.40
595 596 2.159254 GGTAGTTAACGGACACGCCATA 60.159 50.000 13.54 0.00 46.04 2.74
596 597 2.747396 AGTTAACGGACACGCCATAA 57.253 45.000 0.00 0.00 46.04 1.90
597 598 2.340337 AGTTAACGGACACGCCATAAC 58.660 47.619 0.00 0.00 46.04 1.89
598 599 2.028748 AGTTAACGGACACGCCATAACT 60.029 45.455 0.00 0.00 46.04 2.24
600 601 2.973694 AACGGACACGCCATAACTAT 57.026 45.000 0.00 0.00 46.04 2.12
601 602 5.067674 AGTTAACGGACACGCCATAACTATA 59.932 40.000 0.00 0.00 46.04 1.31
602 603 4.389890 AACGGACACGCCATAACTATAA 57.610 40.909 0.00 0.00 46.04 0.98
604 605 4.952460 ACGGACACGCCATAACTATAAAT 58.048 39.130 0.00 0.00 46.04 1.40
605 606 6.088016 ACGGACACGCCATAACTATAAATA 57.912 37.500 0.00 0.00 46.04 1.40
606 607 6.514947 ACGGACACGCCATAACTATAAATAA 58.485 36.000 0.00 0.00 46.04 1.40
607 608 7.156673 ACGGACACGCCATAACTATAAATAAT 58.843 34.615 0.00 0.00 46.04 1.28
608 609 8.306038 ACGGACACGCCATAACTATAAATAATA 58.694 33.333 0.00 0.00 46.04 0.98
609 610 8.804743 CGGACACGCCATAACTATAAATAATAG 58.195 37.037 0.00 0.00 39.22 1.73
610 611 8.601476 GGACACGCCATAACTATAAATAATAGC 58.399 37.037 0.00 0.00 37.90 2.97
612 613 9.667107 ACACGCCATAACTATAAATAATAGCAT 57.333 29.630 0.00 0.00 41.26 3.79
627 628 7.710676 ATAATAGCATATATAGGAGAGGCGG 57.289 40.000 0.00 0.00 0.00 6.13
629 630 2.035632 GCATATATAGGAGAGGCGGCT 58.964 52.381 13.09 13.09 0.00 5.52
630 631 2.223923 GCATATATAGGAGAGGCGGCTG 60.224 54.545 19.63 0.00 0.00 4.85
632 633 2.310779 ATATAGGAGAGGCGGCTGAA 57.689 50.000 19.63 0.00 0.00 3.02
633 634 2.082140 TATAGGAGAGGCGGCTGAAA 57.918 50.000 19.63 0.00 0.00 2.69
635 636 2.082140 TAGGAGAGGCGGCTGAAATA 57.918 50.000 19.63 0.85 0.00 1.40
636 637 1.204146 AGGAGAGGCGGCTGAAATAA 58.796 50.000 19.63 0.00 0.00 1.40
639 640 2.952310 GGAGAGGCGGCTGAAATAAATT 59.048 45.455 19.63 0.00 0.00 1.82
641 642 4.578928 GGAGAGGCGGCTGAAATAAATTAA 59.421 41.667 19.63 0.00 0.00 1.40
642 643 5.278022 GGAGAGGCGGCTGAAATAAATTAAG 60.278 44.000 19.63 0.00 0.00 1.85
644 645 5.885912 AGAGGCGGCTGAAATAAATTAAGAA 59.114 36.000 19.63 0.00 0.00 2.52
645 646 6.377146 AGAGGCGGCTGAAATAAATTAAGAAA 59.623 34.615 19.63 0.00 0.00 2.52
646 647 6.930731 AGGCGGCTGAAATAAATTAAGAAAA 58.069 32.000 12.25 0.00 0.00 2.29
648 649 8.691797 AGGCGGCTGAAATAAATTAAGAAAATA 58.308 29.630 12.25 0.00 0.00 1.40
649 650 9.476202 GGCGGCTGAAATAAATTAAGAAAATAT 57.524 29.630 0.00 0.00 0.00 1.28
661 662 7.807977 ATTAAGAAAATATGTGAGCATCCGT 57.192 32.000 0.00 0.00 36.58 4.69
662 663 5.490139 AAGAAAATATGTGAGCATCCGTG 57.510 39.130 0.00 0.00 36.58 4.94
663 664 4.517285 AGAAAATATGTGAGCATCCGTGT 58.483 39.130 0.00 0.00 36.58 4.49
665 666 2.140065 ATATGTGAGCATCCGTGTCG 57.860 50.000 0.00 0.00 36.58 4.35
666 667 1.099689 TATGTGAGCATCCGTGTCGA 58.900 50.000 0.00 0.00 36.58 4.20
670 671 0.109272 TGAGCATCCGTGTCGAAGTC 60.109 55.000 0.00 0.00 0.00 3.01
671 672 0.171455 GAGCATCCGTGTCGAAGTCT 59.829 55.000 0.00 0.00 0.00 3.24
672 673 1.400846 GAGCATCCGTGTCGAAGTCTA 59.599 52.381 0.00 0.00 0.00 2.59
673 674 1.402259 AGCATCCGTGTCGAAGTCTAG 59.598 52.381 0.00 0.00 0.00 2.43
676 677 0.520404 TCCGTGTCGAAGTCTAGCAC 59.480 55.000 0.00 0.00 0.00 4.40
677 678 0.456312 CCGTGTCGAAGTCTAGCACC 60.456 60.000 0.00 0.00 0.00 5.01
678 679 0.522180 CGTGTCGAAGTCTAGCACCT 59.478 55.000 0.00 0.00 0.00 4.00
683 684 2.229302 GTCGAAGTCTAGCACCTGAACT 59.771 50.000 0.00 0.00 0.00 3.01
684 685 2.488545 TCGAAGTCTAGCACCTGAACTC 59.511 50.000 0.00 0.00 0.00 3.01
685 686 2.229062 CGAAGTCTAGCACCTGAACTCA 59.771 50.000 0.00 0.00 0.00 3.41
686 687 3.671971 CGAAGTCTAGCACCTGAACTCAG 60.672 52.174 0.00 0.00 43.40 3.35
687 688 3.162147 AGTCTAGCACCTGAACTCAGA 57.838 47.619 8.33 0.00 46.59 3.27
688 689 3.707316 AGTCTAGCACCTGAACTCAGAT 58.293 45.455 8.33 0.00 46.59 2.90
690 691 4.887071 AGTCTAGCACCTGAACTCAGATAG 59.113 45.833 8.33 5.44 46.59 2.08
691 692 4.642885 GTCTAGCACCTGAACTCAGATAGT 59.357 45.833 8.33 0.00 46.59 2.12
706 707 8.366671 ACTCAGATAGTTCAACTACAACAAAC 57.633 34.615 0.00 0.00 33.35 2.93
707 708 7.441458 ACTCAGATAGTTCAACTACAACAAACC 59.559 37.037 0.00 0.00 33.35 3.27
709 710 7.771361 TCAGATAGTTCAACTACAACAAACCAA 59.229 33.333 0.00 0.00 32.84 3.67
711 712 5.319140 AGTTCAACTACAACAAACCAACC 57.681 39.130 0.00 0.00 0.00 3.77
712 713 4.767928 AGTTCAACTACAACAAACCAACCA 59.232 37.500 0.00 0.00 0.00 3.67
713 714 5.420739 AGTTCAACTACAACAAACCAACCAT 59.579 36.000 0.00 0.00 0.00 3.55
714 715 5.508200 TCAACTACAACAAACCAACCATC 57.492 39.130 0.00 0.00 0.00 3.51
716 717 6.358178 TCAACTACAACAAACCAACCATCTA 58.642 36.000 0.00 0.00 0.00 1.98
717 718 6.829298 TCAACTACAACAAACCAACCATCTAA 59.171 34.615 0.00 0.00 0.00 2.10
718 719 6.877611 ACTACAACAAACCAACCATCTAAG 57.122 37.500 0.00 0.00 0.00 2.18
719 720 6.362248 ACTACAACAAACCAACCATCTAAGT 58.638 36.000 0.00 0.00 0.00 2.24
720 721 6.831868 ACTACAACAAACCAACCATCTAAGTT 59.168 34.615 0.00 0.00 0.00 2.66
735 736 1.911057 AAGTTGGGCTTAGTTGGCTC 58.089 50.000 0.00 0.00 35.27 4.70
736 737 0.038310 AGTTGGGCTTAGTTGGCTCC 59.962 55.000 0.00 0.00 0.00 4.70
737 738 0.251165 GTTGGGCTTAGTTGGCTCCA 60.251 55.000 0.00 0.00 0.00 3.86
738 739 0.251165 TTGGGCTTAGTTGGCTCCAC 60.251 55.000 0.00 0.00 32.66 4.02
739 740 1.378646 GGGCTTAGTTGGCTCCACC 60.379 63.158 0.00 0.00 39.84 4.61
740 741 1.378646 GGCTTAGTTGGCTCCACCC 60.379 63.158 0.00 0.00 37.83 4.61
741 742 1.378646 GCTTAGTTGGCTCCACCCC 60.379 63.158 0.00 0.00 37.83 4.95
742 743 1.853250 GCTTAGTTGGCTCCACCCCT 61.853 60.000 0.00 0.00 37.83 4.79
743 744 0.253327 CTTAGTTGGCTCCACCCCTC 59.747 60.000 0.00 0.00 37.83 4.30
744 745 0.474854 TTAGTTGGCTCCACCCCTCA 60.475 55.000 0.00 0.00 37.83 3.86
745 746 0.474854 TAGTTGGCTCCACCCCTCAA 60.475 55.000 0.00 0.00 37.83 3.02
746 747 1.142688 AGTTGGCTCCACCCCTCAAT 61.143 55.000 0.00 0.00 37.83 2.57
747 748 0.967380 GTTGGCTCCACCCCTCAATG 60.967 60.000 0.00 0.00 37.83 2.82
748 749 1.139498 TTGGCTCCACCCCTCAATGA 61.139 55.000 0.00 0.00 37.83 2.57
749 750 0.920763 TGGCTCCACCCCTCAATGAT 60.921 55.000 0.00 0.00 37.83 2.45
750 751 0.259938 GGCTCCACCCCTCAATGATT 59.740 55.000 0.00 0.00 0.00 2.57
751 752 1.396653 GCTCCACCCCTCAATGATTG 58.603 55.000 0.00 0.00 0.00 2.67
752 753 1.341383 GCTCCACCCCTCAATGATTGT 60.341 52.381 4.93 0.00 0.00 2.71
753 754 2.648059 CTCCACCCCTCAATGATTGTC 58.352 52.381 4.93 0.00 0.00 3.18
754 755 2.240667 CTCCACCCCTCAATGATTGTCT 59.759 50.000 4.93 0.00 0.00 3.41
755 756 2.649312 TCCACCCCTCAATGATTGTCTT 59.351 45.455 4.93 0.00 0.00 3.01
756 757 3.075882 TCCACCCCTCAATGATTGTCTTT 59.924 43.478 4.93 0.00 0.00 2.52
757 758 3.194116 CCACCCCTCAATGATTGTCTTTG 59.806 47.826 4.93 0.00 34.12 2.77
758 759 2.827921 ACCCCTCAATGATTGTCTTTGC 59.172 45.455 4.93 0.00 33.22 3.68
759 760 3.094572 CCCCTCAATGATTGTCTTTGCT 58.905 45.455 4.93 0.00 33.22 3.91
760 761 3.119245 CCCCTCAATGATTGTCTTTGCTG 60.119 47.826 4.93 0.00 33.22 4.41
761 762 3.760151 CCCTCAATGATTGTCTTTGCTGA 59.240 43.478 4.93 0.00 33.22 4.26
762 763 4.219070 CCCTCAATGATTGTCTTTGCTGAA 59.781 41.667 4.93 0.00 33.22 3.02
763 764 5.279106 CCCTCAATGATTGTCTTTGCTGAAA 60.279 40.000 4.93 0.00 33.22 2.69
764 765 6.395629 CCTCAATGATTGTCTTTGCTGAAAT 58.604 36.000 4.93 0.00 33.22 2.17
765 766 6.310467 CCTCAATGATTGTCTTTGCTGAAATG 59.690 38.462 4.93 0.00 33.22 2.32
766 767 6.983984 TCAATGATTGTCTTTGCTGAAATGA 58.016 32.000 4.93 0.00 33.22 2.57
767 768 6.864685 TCAATGATTGTCTTTGCTGAAATGAC 59.135 34.615 4.93 7.32 41.25 3.06
769 770 4.828939 TGATTGTCTTTGCTGAAATGACCT 59.171 37.500 10.85 0.65 40.54 3.85
771 772 4.836125 TGTCTTTGCTGAAATGACCTTC 57.164 40.909 10.85 0.00 40.54 3.46
772 773 3.569701 TGTCTTTGCTGAAATGACCTTCC 59.430 43.478 10.85 0.00 40.54 3.46
773 774 3.569701 GTCTTTGCTGAAATGACCTTCCA 59.430 43.478 3.57 0.00 37.10 3.53
774 775 3.569701 TCTTTGCTGAAATGACCTTCCAC 59.430 43.478 0.00 0.00 0.00 4.02
775 776 1.522668 TGCTGAAATGACCTTCCACG 58.477 50.000 0.00 0.00 0.00 4.94
776 777 0.169009 GCTGAAATGACCTTCCACGC 59.831 55.000 0.00 0.00 0.00 5.34
777 778 0.804989 CTGAAATGACCTTCCACGCC 59.195 55.000 0.00 0.00 0.00 5.68
778 779 0.400213 TGAAATGACCTTCCACGCCT 59.600 50.000 0.00 0.00 0.00 5.52
779 780 1.626321 TGAAATGACCTTCCACGCCTA 59.374 47.619 0.00 0.00 0.00 3.93
781 782 2.871096 AATGACCTTCCACGCCTAAA 57.129 45.000 0.00 0.00 0.00 1.85
782 783 3.366052 AATGACCTTCCACGCCTAAAT 57.634 42.857 0.00 0.00 0.00 1.40
783 784 2.107950 TGACCTTCCACGCCTAAATG 57.892 50.000 0.00 0.00 0.00 2.32
784 785 1.626321 TGACCTTCCACGCCTAAATGA 59.374 47.619 0.00 0.00 0.00 2.57
786 787 3.279434 GACCTTCCACGCCTAAATGATT 58.721 45.455 0.00 0.00 0.00 2.57
787 788 3.016736 ACCTTCCACGCCTAAATGATTG 58.983 45.455 0.00 0.00 0.00 2.67
788 789 3.278574 CCTTCCACGCCTAAATGATTGA 58.721 45.455 0.00 0.00 0.00 2.57
789 790 3.885297 CCTTCCACGCCTAAATGATTGAT 59.115 43.478 0.00 0.00 0.00 2.57
790 791 5.063204 CCTTCCACGCCTAAATGATTGATA 58.937 41.667 0.00 0.00 0.00 2.15
791 792 5.180117 CCTTCCACGCCTAAATGATTGATAG 59.820 44.000 0.00 0.00 0.00 2.08
793 794 3.814842 CCACGCCTAAATGATTGATAGCA 59.185 43.478 0.00 0.00 0.00 3.49
794 795 4.275689 CCACGCCTAAATGATTGATAGCAA 59.724 41.667 0.00 0.00 38.60 3.91
795 796 5.048504 CCACGCCTAAATGATTGATAGCAAT 60.049 40.000 5.77 5.77 47.00 3.56
796 797 6.149308 CCACGCCTAAATGATTGATAGCAATA 59.851 38.462 6.12 0.00 44.47 1.90
798 799 8.239314 CACGCCTAAATGATTGATAGCAATAAT 58.761 33.333 6.12 1.41 44.47 1.28
799 800 8.796475 ACGCCTAAATGATTGATAGCAATAATT 58.204 29.630 10.04 10.04 44.11 1.40
800 801 9.282247 CGCCTAAATGATTGATAGCAATAATTC 57.718 33.333 15.17 4.08 42.30 2.17
823 824 9.956640 ATTCAATATTCTAGCTTATCTTCTGGG 57.043 33.333 0.00 0.00 0.00 4.45
824 825 7.911651 TCAATATTCTAGCTTATCTTCTGGGG 58.088 38.462 0.00 0.00 0.00 4.96
825 826 4.632327 ATTCTAGCTTATCTTCTGGGGC 57.368 45.455 0.00 0.00 0.00 5.80
826 827 3.046283 TCTAGCTTATCTTCTGGGGCA 57.954 47.619 0.00 0.00 0.00 5.36
827 828 3.591789 TCTAGCTTATCTTCTGGGGCAT 58.408 45.455 0.00 0.00 0.00 4.40
828 829 2.947127 AGCTTATCTTCTGGGGCATC 57.053 50.000 0.00 0.00 0.00 3.91
829 830 2.416638 AGCTTATCTTCTGGGGCATCT 58.583 47.619 0.00 0.00 0.00 2.90
830 831 2.371510 AGCTTATCTTCTGGGGCATCTC 59.628 50.000 0.00 0.00 0.00 2.75
831 832 2.371510 GCTTATCTTCTGGGGCATCTCT 59.628 50.000 0.00 0.00 0.00 3.10
832 833 3.181446 GCTTATCTTCTGGGGCATCTCTT 60.181 47.826 0.00 0.00 0.00 2.85
834 835 5.546526 CTTATCTTCTGGGGCATCTCTTAC 58.453 45.833 0.00 0.00 0.00 2.34
835 836 2.832838 TCTTCTGGGGCATCTCTTACA 58.167 47.619 0.00 0.00 0.00 2.41
837 838 3.055094 TCTTCTGGGGCATCTCTTACAAC 60.055 47.826 0.00 0.00 0.00 3.32
838 839 1.559682 TCTGGGGCATCTCTTACAACC 59.440 52.381 0.00 0.00 0.00 3.77
840 841 1.707989 TGGGGCATCTCTTACAACCAA 59.292 47.619 0.00 0.00 0.00 3.67
841 842 2.290896 TGGGGCATCTCTTACAACCAAG 60.291 50.000 0.00 0.00 0.00 3.61
842 843 1.745653 GGGCATCTCTTACAACCAAGC 59.254 52.381 0.00 0.00 0.00 4.01
848 2748 3.686016 TCTCTTACAACCAAGCAATCCC 58.314 45.455 0.00 0.00 0.00 3.85
1208 3109 0.542467 TGCCCGGTGTACCTTACTCA 60.542 55.000 0.00 0.00 0.00 3.41
1559 3503 2.126189 GGTCGTCTACGTGTGCCC 60.126 66.667 0.00 0.00 40.80 5.36
1700 3659 4.093291 CGAGGGGCAGAGCAGCTT 62.093 66.667 0.00 0.00 34.17 3.74
1810 3769 1.152777 CAAGACCCCACAGGCAACA 60.153 57.895 0.00 0.00 40.58 3.33
2659 4646 3.044305 GCTGGTCACTGTGTCGGC 61.044 66.667 16.79 16.79 0.00 5.54
2913 4912 4.750098 ACCACTTAGACTGTTTTGATGACG 59.250 41.667 0.00 0.00 0.00 4.35
3098 5097 2.224185 TGCTGACGTGGACACTTGTATT 60.224 45.455 0.00 0.00 0.00 1.89
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 7.582719 ACTATGGAATACAATTACACCATGGT 58.417 34.615 13.00 13.00 41.95 3.55
4 5 7.939039 AGGACTATGGAATACAATTACACCATG 59.061 37.037 0.00 0.00 38.37 3.66
5 6 8.045720 AGGACTATGGAATACAATTACACCAT 57.954 34.615 0.00 0.00 40.50 3.55
6 7 7.126573 TGAGGACTATGGAATACAATTACACCA 59.873 37.037 0.00 0.00 0.00 4.17
7 8 7.506114 TGAGGACTATGGAATACAATTACACC 58.494 38.462 0.00 0.00 0.00 4.16
8 9 8.958119 TTGAGGACTATGGAATACAATTACAC 57.042 34.615 0.00 0.00 0.00 2.90
9 10 9.967451 TTTTGAGGACTATGGAATACAATTACA 57.033 29.630 0.00 0.00 0.00 2.41
13 14 9.699410 TCATTTTTGAGGACTATGGAATACAAT 57.301 29.630 0.00 0.00 0.00 2.71
14 15 9.527157 TTCATTTTTGAGGACTATGGAATACAA 57.473 29.630 0.00 0.00 0.00 2.41
15 16 9.699410 ATTCATTTTTGAGGACTATGGAATACA 57.301 29.630 0.00 0.00 0.00 2.29
18 19 9.699410 TGTATTCATTTTTGAGGACTATGGAAT 57.301 29.630 0.00 0.00 0.00 3.01
19 20 9.699410 ATGTATTCATTTTTGAGGACTATGGAA 57.301 29.630 0.00 0.00 0.00 3.53
20 21 9.123902 CATGTATTCATTTTTGAGGACTATGGA 57.876 33.333 0.00 0.00 31.15 3.41
21 22 9.123902 TCATGTATTCATTTTTGAGGACTATGG 57.876 33.333 0.00 0.00 31.15 2.74
49 50 9.698309 GATGTGAGCTGCTAGAAGTTAAATATA 57.302 33.333 0.15 0.00 0.00 0.86
50 51 7.383572 CGATGTGAGCTGCTAGAAGTTAAATAT 59.616 37.037 0.15 0.00 0.00 1.28
51 52 6.697455 CGATGTGAGCTGCTAGAAGTTAAATA 59.303 38.462 0.15 0.00 0.00 1.40
52 53 5.521735 CGATGTGAGCTGCTAGAAGTTAAAT 59.478 40.000 0.15 0.00 0.00 1.40
53 54 4.864806 CGATGTGAGCTGCTAGAAGTTAAA 59.135 41.667 0.15 0.00 0.00 1.52
54 55 4.082190 ACGATGTGAGCTGCTAGAAGTTAA 60.082 41.667 0.15 0.00 0.00 2.01
55 56 3.444034 ACGATGTGAGCTGCTAGAAGTTA 59.556 43.478 0.15 0.00 0.00 2.24
56 57 2.232452 ACGATGTGAGCTGCTAGAAGTT 59.768 45.455 0.15 0.00 0.00 2.66
57 58 1.821753 ACGATGTGAGCTGCTAGAAGT 59.178 47.619 0.15 0.00 0.00 3.01
58 59 2.575694 ACGATGTGAGCTGCTAGAAG 57.424 50.000 0.15 0.00 0.00 2.85
59 60 4.655762 AATACGATGTGAGCTGCTAGAA 57.344 40.909 0.15 0.00 0.00 2.10
60 61 4.655762 AAATACGATGTGAGCTGCTAGA 57.344 40.909 0.15 0.00 0.00 2.43
61 62 4.551603 GCAAAATACGATGTGAGCTGCTAG 60.552 45.833 0.15 0.00 0.00 3.42
62 63 3.309682 GCAAAATACGATGTGAGCTGCTA 59.690 43.478 0.15 0.00 0.00 3.49
63 64 2.096496 GCAAAATACGATGTGAGCTGCT 59.904 45.455 0.00 0.00 0.00 4.24
64 65 2.444351 GCAAAATACGATGTGAGCTGC 58.556 47.619 0.00 0.00 0.00 5.25
65 66 2.419673 TGGCAAAATACGATGTGAGCTG 59.580 45.455 0.00 0.00 0.00 4.24
66 67 2.420022 GTGGCAAAATACGATGTGAGCT 59.580 45.455 0.00 0.00 0.00 4.09
68 69 2.670905 TCGTGGCAAAATACGATGTGAG 59.329 45.455 0.00 0.00 43.54 3.51
69 70 2.689646 TCGTGGCAAAATACGATGTGA 58.310 42.857 0.00 0.00 43.54 3.58
75 76 5.025986 ACTACTTTTCGTGGCAAAATACG 57.974 39.130 0.00 0.00 41.38 3.06
78 79 9.783256 GATTTATACTACTTTTCGTGGCAAAAT 57.217 29.630 0.00 0.00 0.00 1.82
79 80 8.238631 GGATTTATACTACTTTTCGTGGCAAAA 58.761 33.333 0.00 0.00 0.00 2.44
80 81 7.390996 TGGATTTATACTACTTTTCGTGGCAAA 59.609 33.333 0.00 0.00 0.00 3.68
81 82 6.879993 TGGATTTATACTACTTTTCGTGGCAA 59.120 34.615 0.00 0.00 0.00 4.52
82 83 6.408035 TGGATTTATACTACTTTTCGTGGCA 58.592 36.000 0.00 0.00 0.00 4.92
84 85 7.762615 TGTCTGGATTTATACTACTTTTCGTGG 59.237 37.037 0.00 0.00 0.00 4.94
85 86 8.697846 TGTCTGGATTTATACTACTTTTCGTG 57.302 34.615 0.00 0.00 0.00 4.35
87 88 9.314321 ACATGTCTGGATTTATACTACTTTTCG 57.686 33.333 0.00 0.00 0.00 3.46
89 90 9.959721 ACACATGTCTGGATTTATACTACTTTT 57.040 29.630 0.00 0.00 0.00 2.27
90 91 9.383519 CACACATGTCTGGATTTATACTACTTT 57.616 33.333 0.00 0.00 0.00 2.66
91 92 8.540388 ACACACATGTCTGGATTTATACTACTT 58.460 33.333 6.06 0.00 31.55 2.24
92 93 8.079211 ACACACATGTCTGGATTTATACTACT 57.921 34.615 6.06 0.00 31.55 2.57
93 94 9.245962 GTACACACATGTCTGGATTTATACTAC 57.754 37.037 6.06 0.00 40.48 2.73
94 95 9.197306 AGTACACACATGTCTGGATTTATACTA 57.803 33.333 6.06 0.00 40.48 1.82
95 96 8.079211 AGTACACACATGTCTGGATTTATACT 57.921 34.615 6.06 0.92 40.48 2.12
97 98 9.733556 AAAAGTACACACATGTCTGGATTTATA 57.266 29.630 6.06 0.00 40.48 0.98
99 100 8.458573 AAAAAGTACACACATGTCTGGATTTA 57.541 30.769 6.06 0.00 40.48 1.40
100 101 6.959639 AAAAGTACACACATGTCTGGATTT 57.040 33.333 6.06 0.00 40.48 2.17
101 102 6.545666 TGAAAAAGTACACACATGTCTGGATT 59.454 34.615 6.06 0.00 40.48 3.01
102 103 6.061441 TGAAAAAGTACACACATGTCTGGAT 58.939 36.000 6.06 0.00 40.48 3.41
103 104 5.432645 TGAAAAAGTACACACATGTCTGGA 58.567 37.500 6.06 0.00 40.48 3.86
106 107 7.807977 ATTCTGAAAAAGTACACACATGTCT 57.192 32.000 0.00 0.00 40.48 3.41
107 108 8.856490 AAATTCTGAAAAAGTACACACATGTC 57.144 30.769 0.00 0.00 40.48 3.06
108 109 9.651913 AAAAATTCTGAAAAAGTACACACATGT 57.348 25.926 0.00 0.00 43.30 3.21
146 147 9.781834 GGTTTTTGGAAAATTCGAAATTCTTTT 57.218 25.926 20.00 14.22 35.37 2.27
147 148 8.951243 TGGTTTTTGGAAAATTCGAAATTCTTT 58.049 25.926 20.00 10.69 35.37 2.52
148 149 8.499403 TGGTTTTTGGAAAATTCGAAATTCTT 57.501 26.923 20.00 2.16 35.37 2.52
152 153 5.238432 GCCTGGTTTTTGGAAAATTCGAAAT 59.762 36.000 0.00 0.00 35.37 2.17
153 154 4.572795 GCCTGGTTTTTGGAAAATTCGAAA 59.427 37.500 0.00 0.01 33.91 3.46
154 155 4.123506 GCCTGGTTTTTGGAAAATTCGAA 58.876 39.130 0.00 0.00 0.00 3.71
155 156 3.386402 AGCCTGGTTTTTGGAAAATTCGA 59.614 39.130 0.00 0.00 0.00 3.71
157 158 4.065088 GGAGCCTGGTTTTTGGAAAATTC 58.935 43.478 0.00 0.00 0.00 2.17
158 159 3.457749 TGGAGCCTGGTTTTTGGAAAATT 59.542 39.130 0.00 0.00 0.00 1.82
159 160 3.044894 TGGAGCCTGGTTTTTGGAAAAT 58.955 40.909 0.00 0.00 0.00 1.82
160 161 2.472029 TGGAGCCTGGTTTTTGGAAAA 58.528 42.857 0.00 0.00 0.00 2.29
161 162 2.166907 TGGAGCCTGGTTTTTGGAAA 57.833 45.000 0.00 0.00 0.00 3.13
162 163 2.166907 TTGGAGCCTGGTTTTTGGAA 57.833 45.000 0.00 0.00 0.00 3.53
163 164 1.760029 GTTTGGAGCCTGGTTTTTGGA 59.240 47.619 0.00 0.00 0.00 3.53
165 166 2.093764 TGTGTTTGGAGCCTGGTTTTTG 60.094 45.455 0.00 0.00 0.00 2.44
166 167 2.168313 CTGTGTTTGGAGCCTGGTTTTT 59.832 45.455 0.00 0.00 0.00 1.94
168 169 1.341976 ACTGTGTTTGGAGCCTGGTTT 60.342 47.619 0.00 0.00 0.00 3.27
169 170 0.258774 ACTGTGTTTGGAGCCTGGTT 59.741 50.000 0.00 0.00 0.00 3.67
170 171 0.258774 AACTGTGTTTGGAGCCTGGT 59.741 50.000 0.00 0.00 0.00 4.00
171 172 1.402787 AAACTGTGTTTGGAGCCTGG 58.597 50.000 0.00 0.00 0.00 4.45
173 174 5.631119 AGTATTAAACTGTGTTTGGAGCCT 58.369 37.500 6.01 0.00 36.93 4.58
174 175 5.959618 AGTATTAAACTGTGTTTGGAGCC 57.040 39.130 6.01 0.00 36.93 4.70
175 176 7.668525 ACTAGTATTAAACTGTGTTTGGAGC 57.331 36.000 0.00 0.00 39.39 4.70
176 177 8.718734 GGAACTAGTATTAAACTGTGTTTGGAG 58.281 37.037 0.00 0.00 39.39 3.86
177 178 8.212312 TGGAACTAGTATTAAACTGTGTTTGGA 58.788 33.333 0.00 0.00 39.39 3.53
178 179 8.287503 GTGGAACTAGTATTAAACTGTGTTTGG 58.712 37.037 0.00 0.00 39.39 3.28
180 181 7.994334 TGGTGGAACTAGTATTAAACTGTGTTT 59.006 33.333 0.00 1.33 39.39 2.83
181 182 7.511268 TGGTGGAACTAGTATTAAACTGTGTT 58.489 34.615 0.00 5.98 39.39 3.32
182 183 7.069877 TGGTGGAACTAGTATTAAACTGTGT 57.930 36.000 0.00 0.00 39.39 3.72
183 184 7.442969 TGTTGGTGGAACTAGTATTAAACTGTG 59.557 37.037 0.00 0.00 34.89 3.66
185 186 7.876068 TCTGTTGGTGGAACTAGTATTAAACTG 59.124 37.037 0.00 1.94 34.89 3.16
186 187 7.876582 GTCTGTTGGTGGAACTAGTATTAAACT 59.123 37.037 0.00 0.00 35.96 2.66
187 188 7.118825 GGTCTGTTGGTGGAACTAGTATTAAAC 59.881 40.741 0.00 0.00 36.74 2.01
188 189 7.163441 GGTCTGTTGGTGGAACTAGTATTAAA 58.837 38.462 0.00 0.00 36.74 1.52
189 190 6.270463 TGGTCTGTTGGTGGAACTAGTATTAA 59.730 38.462 0.00 0.00 36.74 1.40
190 191 5.781306 TGGTCTGTTGGTGGAACTAGTATTA 59.219 40.000 0.00 0.00 36.74 0.98
191 192 4.595781 TGGTCTGTTGGTGGAACTAGTATT 59.404 41.667 0.00 0.00 36.74 1.89
192 193 4.164981 TGGTCTGTTGGTGGAACTAGTAT 58.835 43.478 0.00 0.00 36.74 2.12
193 194 3.578978 TGGTCTGTTGGTGGAACTAGTA 58.421 45.455 0.00 0.00 36.74 1.82
194 195 2.404559 TGGTCTGTTGGTGGAACTAGT 58.595 47.619 0.00 0.00 36.74 2.57
195 196 3.139077 GTTGGTCTGTTGGTGGAACTAG 58.861 50.000 0.00 0.00 36.74 2.57
196 197 2.506231 TGTTGGTCTGTTGGTGGAACTA 59.494 45.455 0.00 0.00 36.74 2.24
197 198 1.283613 TGTTGGTCTGTTGGTGGAACT 59.716 47.619 0.00 0.00 36.74 3.01
198 199 1.757682 TGTTGGTCTGTTGGTGGAAC 58.242 50.000 0.00 0.00 34.84 3.62
199 200 2.746279 ATGTTGGTCTGTTGGTGGAA 57.254 45.000 0.00 0.00 0.00 3.53
200 201 2.549134 CGTATGTTGGTCTGTTGGTGGA 60.549 50.000 0.00 0.00 0.00 4.02
202 203 2.761559 TCGTATGTTGGTCTGTTGGTG 58.238 47.619 0.00 0.00 0.00 4.17
203 204 3.007506 TGATCGTATGTTGGTCTGTTGGT 59.992 43.478 0.00 0.00 0.00 3.67
204 205 3.595173 TGATCGTATGTTGGTCTGTTGG 58.405 45.455 0.00 0.00 0.00 3.77
205 206 5.605564 TTTGATCGTATGTTGGTCTGTTG 57.394 39.130 0.00 0.00 0.00 3.33
206 207 7.064609 CACTATTTGATCGTATGTTGGTCTGTT 59.935 37.037 0.00 0.00 0.00 3.16
208 209 6.756542 TCACTATTTGATCGTATGTTGGTCTG 59.243 38.462 0.00 0.00 0.00 3.51
209 210 6.873997 TCACTATTTGATCGTATGTTGGTCT 58.126 36.000 0.00 0.00 0.00 3.85
210 211 7.715265 ATCACTATTTGATCGTATGTTGGTC 57.285 36.000 0.00 0.00 41.53 4.02
240 241 9.225682 ACATGGGAGGTAAGAAGATAAGATTTA 57.774 33.333 0.00 0.00 0.00 1.40
241 242 8.107196 ACATGGGAGGTAAGAAGATAAGATTT 57.893 34.615 0.00 0.00 0.00 2.17
244 245 8.618240 TTTACATGGGAGGTAAGAAGATAAGA 57.382 34.615 0.00 0.00 32.76 2.10
245 246 9.331282 CTTTTACATGGGAGGTAAGAAGATAAG 57.669 37.037 0.00 0.00 32.76 1.73
246 247 8.272173 CCTTTTACATGGGAGGTAAGAAGATAA 58.728 37.037 0.00 0.00 32.76 1.75
247 248 7.626084 TCCTTTTACATGGGAGGTAAGAAGATA 59.374 37.037 0.00 0.00 32.76 1.98
248 249 6.447084 TCCTTTTACATGGGAGGTAAGAAGAT 59.553 38.462 0.00 0.00 32.76 2.40
250 251 6.062258 TCCTTTTACATGGGAGGTAAGAAG 57.938 41.667 0.00 0.00 32.76 2.85
251 252 6.062258 CTCCTTTTACATGGGAGGTAAGAA 57.938 41.667 6.98 0.00 41.93 2.52
252 253 5.693769 CTCCTTTTACATGGGAGGTAAGA 57.306 43.478 6.98 0.00 41.93 2.10
259 260 2.929301 ACCTCCTCCTTTTACATGGGA 58.071 47.619 0.00 0.00 0.00 4.37
260 261 4.781934 CTTACCTCCTCCTTTTACATGGG 58.218 47.826 0.00 0.00 0.00 4.00
261 262 4.200092 GCTTACCTCCTCCTTTTACATGG 58.800 47.826 0.00 0.00 0.00 3.66
262 263 4.843728 TGCTTACCTCCTCCTTTTACATG 58.156 43.478 0.00 0.00 0.00 3.21
263 264 4.783227 TCTGCTTACCTCCTCCTTTTACAT 59.217 41.667 0.00 0.00 0.00 2.29
266 267 3.775316 CCTCTGCTTACCTCCTCCTTTTA 59.225 47.826 0.00 0.00 0.00 1.52
267 268 2.573915 CCTCTGCTTACCTCCTCCTTTT 59.426 50.000 0.00 0.00 0.00 2.27
268 269 2.192263 CCTCTGCTTACCTCCTCCTTT 58.808 52.381 0.00 0.00 0.00 3.11
269 270 1.623834 CCCTCTGCTTACCTCCTCCTT 60.624 57.143 0.00 0.00 0.00 3.36
271 272 0.032017 TCCCTCTGCTTACCTCCTCC 60.032 60.000 0.00 0.00 0.00 4.30
272 273 1.408969 CTCCCTCTGCTTACCTCCTC 58.591 60.000 0.00 0.00 0.00 3.71
274 275 0.978146 TGCTCCCTCTGCTTACCTCC 60.978 60.000 0.00 0.00 0.00 4.30
275 276 1.127343 ATGCTCCCTCTGCTTACCTC 58.873 55.000 0.00 0.00 0.00 3.85
278 279 2.409948 AACATGCTCCCTCTGCTTAC 57.590 50.000 0.00 0.00 0.00 2.34
281 282 3.439857 TTTTAACATGCTCCCTCTGCT 57.560 42.857 0.00 0.00 0.00 4.24
282 283 4.725790 ATTTTTAACATGCTCCCTCTGC 57.274 40.909 0.00 0.00 0.00 4.26
284 285 6.122964 GGAGTATTTTTAACATGCTCCCTCT 58.877 40.000 14.57 0.00 44.00 3.69
285 286 6.378710 GGAGTATTTTTAACATGCTCCCTC 57.621 41.667 14.57 0.00 44.00 4.30
291 292 4.335594 AGCCGAGGAGTATTTTTAACATGC 59.664 41.667 0.00 0.00 0.00 4.06
294 295 5.416271 AGAGCCGAGGAGTATTTTTAACA 57.584 39.130 0.00 0.00 0.00 2.41
295 296 8.976471 GTTATAGAGCCGAGGAGTATTTTTAAC 58.024 37.037 0.00 0.00 0.00 2.01
299 300 6.726490 TGTTATAGAGCCGAGGAGTATTTT 57.274 37.500 0.00 0.00 0.00 1.82
300 301 6.324254 ACTTGTTATAGAGCCGAGGAGTATTT 59.676 38.462 0.00 0.00 0.00 1.40
302 303 5.241949 CACTTGTTATAGAGCCGAGGAGTAT 59.758 44.000 0.00 0.00 0.00 2.12
303 304 4.579340 CACTTGTTATAGAGCCGAGGAGTA 59.421 45.833 0.00 0.00 0.00 2.59
304 305 3.381908 CACTTGTTATAGAGCCGAGGAGT 59.618 47.826 0.00 0.00 0.00 3.85
305 306 3.632604 TCACTTGTTATAGAGCCGAGGAG 59.367 47.826 0.00 0.00 0.00 3.69
306 307 3.628008 TCACTTGTTATAGAGCCGAGGA 58.372 45.455 0.00 0.00 0.00 3.71
308 309 6.910536 ATTTTCACTTGTTATAGAGCCGAG 57.089 37.500 0.00 0.00 0.00 4.63
309 310 7.324935 TGTATTTTCACTTGTTATAGAGCCGA 58.675 34.615 0.00 0.00 0.00 5.54
311 312 8.947115 ACTTGTATTTTCACTTGTTATAGAGCC 58.053 33.333 0.00 0.00 0.00 4.70
332 333 9.804758 GCTTAGTCTCATTAGTTGTATACTTGT 57.195 33.333 4.17 0.00 38.33 3.16
333 334 9.803315 TGCTTAGTCTCATTAGTTGTATACTTG 57.197 33.333 4.17 0.00 38.33 3.16
334 335 9.804758 GTGCTTAGTCTCATTAGTTGTATACTT 57.195 33.333 4.17 0.00 38.33 2.24
335 336 9.191479 AGTGCTTAGTCTCATTAGTTGTATACT 57.809 33.333 4.17 0.00 41.04 2.12
336 337 9.453325 GAGTGCTTAGTCTCATTAGTTGTATAC 57.547 37.037 0.00 0.00 0.00 1.47
337 338 9.185680 TGAGTGCTTAGTCTCATTAGTTGTATA 57.814 33.333 5.51 0.00 36.04 1.47
338 339 8.067751 TGAGTGCTTAGTCTCATTAGTTGTAT 57.932 34.615 5.51 0.00 36.04 2.29
340 341 6.346477 TGAGTGCTTAGTCTCATTAGTTGT 57.654 37.500 5.51 0.00 36.04 3.32
341 342 5.290643 GCTGAGTGCTTAGTCTCATTAGTTG 59.709 44.000 8.89 0.87 39.48 3.16
343 344 4.464244 TGCTGAGTGCTTAGTCTCATTAGT 59.536 41.667 8.89 0.00 43.37 2.24
344 345 5.003692 TGCTGAGTGCTTAGTCTCATTAG 57.996 43.478 8.89 1.91 43.37 1.73
347 348 2.168106 CCTGCTGAGTGCTTAGTCTCAT 59.832 50.000 8.89 0.00 43.37 2.90
348 349 1.547820 CCTGCTGAGTGCTTAGTCTCA 59.452 52.381 8.36 8.36 43.37 3.27
349 350 1.134848 CCCTGCTGAGTGCTTAGTCTC 60.135 57.143 0.00 0.00 43.37 3.36
350 351 0.901124 CCCTGCTGAGTGCTTAGTCT 59.099 55.000 0.00 0.00 43.37 3.24
351 352 0.898320 TCCCTGCTGAGTGCTTAGTC 59.102 55.000 0.00 0.00 43.37 2.59
353 354 0.901124 ACTCCCTGCTGAGTGCTTAG 59.099 55.000 3.77 0.00 43.80 2.18
355 356 3.897856 ACTCCCTGCTGAGTGCTT 58.102 55.556 3.77 0.00 43.80 3.91
359 360 1.261480 CAGTACACTCCCTGCTGAGT 58.739 55.000 0.00 0.00 46.35 3.41
365 366 2.180276 ACTTAGGCAGTACACTCCCTG 58.820 52.381 1.87 0.00 34.36 4.45
366 367 2.567615 CAACTTAGGCAGTACACTCCCT 59.432 50.000 0.00 0.00 37.94 4.20
367 368 2.935676 GCAACTTAGGCAGTACACTCCC 60.936 54.545 0.00 0.00 32.94 4.30
368 369 2.028020 AGCAACTTAGGCAGTACACTCC 60.028 50.000 0.00 0.00 32.94 3.85
369 370 3.320673 AGCAACTTAGGCAGTACACTC 57.679 47.619 0.00 0.00 32.94 3.51
370 371 3.665190 GAAGCAACTTAGGCAGTACACT 58.335 45.455 0.00 0.00 32.94 3.55
371 372 2.412089 CGAAGCAACTTAGGCAGTACAC 59.588 50.000 0.00 0.00 32.94 2.90
372 373 2.611971 CCGAAGCAACTTAGGCAGTACA 60.612 50.000 0.00 0.00 32.94 2.90
373 374 2.000447 CCGAAGCAACTTAGGCAGTAC 59.000 52.381 0.00 0.00 32.94 2.73
374 375 2.380084 CCGAAGCAACTTAGGCAGTA 57.620 50.000 0.00 0.00 32.94 2.74
375 376 3.233355 CCGAAGCAACTTAGGCAGT 57.767 52.632 0.00 0.00 37.30 4.40
379 380 2.029838 ATGAGCCGAAGCAACTTAGG 57.970 50.000 2.46 2.46 43.56 2.69
380 381 4.046938 TCTATGAGCCGAAGCAACTTAG 57.953 45.455 0.00 0.00 43.56 2.18
381 382 4.465632 TTCTATGAGCCGAAGCAACTTA 57.534 40.909 0.00 0.00 43.56 2.24
382 383 3.334583 TTCTATGAGCCGAAGCAACTT 57.665 42.857 0.00 0.00 43.56 2.66
384 385 4.811557 AGTTATTCTATGAGCCGAAGCAAC 59.188 41.667 0.00 0.00 43.56 4.17
386 387 4.099419 TCAGTTATTCTATGAGCCGAAGCA 59.901 41.667 0.00 0.00 43.56 3.91
387 388 4.621991 TCAGTTATTCTATGAGCCGAAGC 58.378 43.478 0.00 0.00 40.32 3.86
390 391 7.611855 TCATCTATCAGTTATTCTATGAGCCGA 59.388 37.037 0.00 0.00 0.00 5.54
391 392 7.766283 TCATCTATCAGTTATTCTATGAGCCG 58.234 38.462 0.00 0.00 0.00 5.52
399 400 8.240682 GCGTGTCTATCATCTATCAGTTATTCT 58.759 37.037 0.00 0.00 0.00 2.40
401 402 7.177568 AGGCGTGTCTATCATCTATCAGTTATT 59.822 37.037 0.00 0.00 0.00 1.40
402 403 6.661377 AGGCGTGTCTATCATCTATCAGTTAT 59.339 38.462 0.00 0.00 0.00 1.89
404 405 4.830046 AGGCGTGTCTATCATCTATCAGTT 59.170 41.667 0.00 0.00 0.00 3.16
405 406 4.402829 AGGCGTGTCTATCATCTATCAGT 58.597 43.478 0.00 0.00 0.00 3.41
406 407 4.142491 GGAGGCGTGTCTATCATCTATCAG 60.142 50.000 0.00 0.00 0.00 2.90
407 408 3.759086 GGAGGCGTGTCTATCATCTATCA 59.241 47.826 0.00 0.00 0.00 2.15
410 411 3.223674 TGGAGGCGTGTCTATCATCTA 57.776 47.619 0.00 0.00 0.00 1.98
411 412 2.073252 TGGAGGCGTGTCTATCATCT 57.927 50.000 0.00 0.00 0.00 2.90
414 415 4.955811 AATAATGGAGGCGTGTCTATCA 57.044 40.909 0.00 0.00 0.00 2.15
415 416 4.691216 GGAAATAATGGAGGCGTGTCTATC 59.309 45.833 0.00 0.00 0.00 2.08
416 417 4.642429 GGAAATAATGGAGGCGTGTCTAT 58.358 43.478 0.00 0.00 0.00 1.98
417 418 3.491964 CGGAAATAATGGAGGCGTGTCTA 60.492 47.826 0.00 0.00 0.00 2.59
418 419 2.741878 CGGAAATAATGGAGGCGTGTCT 60.742 50.000 0.00 0.00 0.00 3.41
419 420 1.597663 CGGAAATAATGGAGGCGTGTC 59.402 52.381 0.00 0.00 0.00 3.67
420 421 1.065709 ACGGAAATAATGGAGGCGTGT 60.066 47.619 0.00 0.00 0.00 4.49
421 422 1.663695 ACGGAAATAATGGAGGCGTG 58.336 50.000 0.00 0.00 0.00 5.34
422 423 2.413310 AACGGAAATAATGGAGGCGT 57.587 45.000 0.00 0.00 0.00 5.68
423 424 3.377172 AGAAAACGGAAATAATGGAGGCG 59.623 43.478 0.00 0.00 0.00 5.52
424 425 4.983671 AGAAAACGGAAATAATGGAGGC 57.016 40.909 0.00 0.00 0.00 4.70
425 426 9.301153 CAAATAAGAAAACGGAAATAATGGAGG 57.699 33.333 0.00 0.00 0.00 4.30
433 434 9.244799 GTGTTTCTCAAATAAGAAAACGGAAAT 57.755 29.630 0.95 0.00 44.54 2.17
434 435 8.244802 TGTGTTTCTCAAATAAGAAAACGGAAA 58.755 29.630 0.95 0.00 44.54 3.13
436 437 7.323049 TGTGTTTCTCAAATAAGAAAACGGA 57.677 32.000 0.95 0.00 44.54 4.69
438 439 8.311120 GTGTTGTGTTTCTCAAATAAGAAAACG 58.689 33.333 0.95 0.00 44.54 3.60
439 440 9.134734 TGTGTTGTGTTTCTCAAATAAGAAAAC 57.865 29.630 0.95 3.76 44.54 2.43
440 441 9.352784 CTGTGTTGTGTTTCTCAAATAAGAAAA 57.647 29.630 0.95 0.00 44.54 2.29
441 442 8.735315 TCTGTGTTGTGTTTCTCAAATAAGAAA 58.265 29.630 0.00 0.00 41.70 2.52
444 445 7.012327 TCCTCTGTGTTGTGTTTCTCAAATAAG 59.988 37.037 0.00 0.00 0.00 1.73
446 447 6.353323 TCCTCTGTGTTGTGTTTCTCAAATA 58.647 36.000 0.00 0.00 0.00 1.40
447 448 5.192927 TCCTCTGTGTTGTGTTTCTCAAAT 58.807 37.500 0.00 0.00 0.00 2.32
451 452 4.060038 TCTCCTCTGTGTTGTGTTTCTC 57.940 45.455 0.00 0.00 0.00 2.87
452 453 4.192317 GTTCTCCTCTGTGTTGTGTTTCT 58.808 43.478 0.00 0.00 0.00 2.52
453 454 3.001330 CGTTCTCCTCTGTGTTGTGTTTC 59.999 47.826 0.00 0.00 0.00 2.78
454 455 2.936498 CGTTCTCCTCTGTGTTGTGTTT 59.064 45.455 0.00 0.00 0.00 2.83
456 457 1.806623 GCGTTCTCCTCTGTGTTGTGT 60.807 52.381 0.00 0.00 0.00 3.72
457 458 0.861837 GCGTTCTCCTCTGTGTTGTG 59.138 55.000 0.00 0.00 0.00 3.33
458 459 0.753262 AGCGTTCTCCTCTGTGTTGT 59.247 50.000 0.00 0.00 0.00 3.32
459 460 1.269778 TGAGCGTTCTCCTCTGTGTTG 60.270 52.381 0.00 0.00 38.58 3.33
462 463 0.315251 TGTGAGCGTTCTCCTCTGTG 59.685 55.000 0.00 0.00 38.58 3.66
463 464 1.040646 TTGTGAGCGTTCTCCTCTGT 58.959 50.000 0.00 0.00 38.58 3.41
464 465 1.269778 TGTTGTGAGCGTTCTCCTCTG 60.270 52.381 0.00 0.00 38.58 3.35
465 466 1.040646 TGTTGTGAGCGTTCTCCTCT 58.959 50.000 0.00 0.00 38.58 3.69
466 467 1.728971 CATGTTGTGAGCGTTCTCCTC 59.271 52.381 0.00 0.00 38.58 3.71
467 468 1.344438 TCATGTTGTGAGCGTTCTCCT 59.656 47.619 0.00 0.00 38.58 3.69
468 469 1.795768 TCATGTTGTGAGCGTTCTCC 58.204 50.000 0.00 0.00 38.58 3.71
469 470 5.725110 ATATTCATGTTGTGAGCGTTCTC 57.275 39.130 0.00 0.00 38.29 2.87
470 471 5.232202 CGTATATTCATGTTGTGAGCGTTCT 59.768 40.000 0.00 0.00 38.29 3.01
471 472 5.423717 CGTATATTCATGTTGTGAGCGTTC 58.576 41.667 0.00 0.00 38.29 3.95
472 473 4.260212 GCGTATATTCATGTTGTGAGCGTT 60.260 41.667 0.00 0.00 38.29 4.84
473 474 3.245284 GCGTATATTCATGTTGTGAGCGT 59.755 43.478 0.00 0.00 38.29 5.07
474 475 3.245048 TGCGTATATTCATGTTGTGAGCG 59.755 43.478 0.00 0.00 38.29 5.03
475 476 4.033932 TGTGCGTATATTCATGTTGTGAGC 59.966 41.667 0.00 0.00 38.29 4.26
476 477 5.717038 TGTGCGTATATTCATGTTGTGAG 57.283 39.130 0.00 0.00 38.29 3.51
479 480 6.017440 GGGTTATGTGCGTATATTCATGTTGT 60.017 38.462 0.00 0.00 0.00 3.32
480 481 6.204688 AGGGTTATGTGCGTATATTCATGTTG 59.795 38.462 0.00 0.00 0.00 3.33
481 482 6.296026 AGGGTTATGTGCGTATATTCATGTT 58.704 36.000 0.00 0.00 0.00 2.71
483 484 6.312918 GGTAGGGTTATGTGCGTATATTCATG 59.687 42.308 0.00 0.00 0.00 3.07
485 486 5.541101 AGGTAGGGTTATGTGCGTATATTCA 59.459 40.000 0.00 0.00 0.00 2.57
486 487 6.034161 AGGTAGGGTTATGTGCGTATATTC 57.966 41.667 0.00 0.00 0.00 1.75
487 488 5.778750 AGAGGTAGGGTTATGTGCGTATATT 59.221 40.000 0.00 0.00 0.00 1.28
489 490 4.733165 AGAGGTAGGGTTATGTGCGTATA 58.267 43.478 0.00 0.00 0.00 1.47
494 495 4.561734 GCTCATAGAGGTAGGGTTATGTGC 60.562 50.000 0.00 0.00 36.49 4.57
495 496 4.588951 TGCTCATAGAGGTAGGGTTATGTG 59.411 45.833 0.00 0.00 0.00 3.21
496 497 4.816126 TGCTCATAGAGGTAGGGTTATGT 58.184 43.478 0.00 0.00 0.00 2.29
497 498 5.719085 AGATGCTCATAGAGGTAGGGTTATG 59.281 44.000 0.00 0.00 0.00 1.90
498 499 5.909760 AGATGCTCATAGAGGTAGGGTTAT 58.090 41.667 0.00 0.00 0.00 1.89
499 500 5.340891 AGATGCTCATAGAGGTAGGGTTA 57.659 43.478 0.00 0.00 0.00 2.85
500 501 4.206244 AGATGCTCATAGAGGTAGGGTT 57.794 45.455 0.00 0.00 0.00 4.11
502 503 5.559148 AAAAGATGCTCATAGAGGTAGGG 57.441 43.478 0.00 0.00 0.00 3.53
505 506 8.948401 ATCTCTAAAAGATGCTCATAGAGGTA 57.052 34.615 7.93 0.00 43.35 3.08
506 507 7.854166 ATCTCTAAAAGATGCTCATAGAGGT 57.146 36.000 7.93 0.00 43.35 3.85
508 509 9.761504 TTCAATCTCTAAAAGATGCTCATAGAG 57.238 33.333 0.00 0.00 44.26 2.43
509 510 9.539825 GTTCAATCTCTAAAAGATGCTCATAGA 57.460 33.333 0.00 0.00 44.26 1.98
511 512 7.716998 GGGTTCAATCTCTAAAAGATGCTCATA 59.283 37.037 0.00 0.00 44.26 2.15
512 513 6.545298 GGGTTCAATCTCTAAAAGATGCTCAT 59.455 38.462 0.00 0.00 44.26 2.90
513 514 5.882557 GGGTTCAATCTCTAAAAGATGCTCA 59.117 40.000 0.00 0.00 44.26 4.26
514 515 5.882557 TGGGTTCAATCTCTAAAAGATGCTC 59.117 40.000 0.00 0.00 44.26 4.26
536 537 9.979270 GCGACTTCATAATCTCAAAATATATGG 57.021 33.333 0.00 0.00 0.00 2.74
541 542 9.764363 ATGTAGCGACTTCATAATCTCAAAATA 57.236 29.630 0.00 0.00 0.00 1.40
543 544 7.465916 GCATGTAGCGACTTCATAATCTCAAAA 60.466 37.037 0.00 0.00 0.00 2.44
544 545 6.018751 GCATGTAGCGACTTCATAATCTCAAA 60.019 38.462 0.00 0.00 0.00 2.69
547 548 5.508124 GCATGTAGCGACTTCATAATCTC 57.492 43.478 0.00 0.00 0.00 2.75
561 562 2.661866 CTACCGGGCGCATGTAGC 60.662 66.667 10.83 6.74 40.87 3.58
563 564 0.822811 TTAACTACCGGGCGCATGTA 59.177 50.000 10.83 6.23 0.00 2.29
564 565 0.741927 GTTAACTACCGGGCGCATGT 60.742 55.000 10.83 5.21 0.00 3.21
565 566 1.758319 CGTTAACTACCGGGCGCATG 61.758 60.000 10.83 0.00 0.00 4.06
567 568 2.125991 CGTTAACTACCGGGCGCA 60.126 61.111 10.83 0.00 0.00 6.09
569 570 1.517039 GTCCGTTAACTACCGGGCG 60.517 63.158 6.32 0.00 44.32 6.13
570 571 4.502263 GTCCGTTAACTACCGGGC 57.498 61.111 6.32 0.00 44.32 6.13
571 572 0.456653 CGTGTCCGTTAACTACCGGG 60.457 60.000 6.32 0.00 44.32 5.73
572 573 1.072666 GCGTGTCCGTTAACTACCGG 61.073 60.000 0.00 0.00 45.55 5.28
573 574 1.072666 GGCGTGTCCGTTAACTACCG 61.073 60.000 3.71 8.63 36.15 4.02
574 575 0.038343 TGGCGTGTCCGTTAACTACC 60.038 55.000 3.71 0.00 37.80 3.18
575 576 2.000429 ATGGCGTGTCCGTTAACTAC 58.000 50.000 3.71 2.73 37.80 2.73
576 577 3.193267 AGTTATGGCGTGTCCGTTAACTA 59.807 43.478 3.71 0.00 41.09 2.24
578 579 2.340337 AGTTATGGCGTGTCCGTTAAC 58.660 47.619 0.00 0.00 36.80 2.01
579 580 2.747396 AGTTATGGCGTGTCCGTTAA 57.253 45.000 0.00 0.00 37.80 2.01
580 581 5.512753 TTATAGTTATGGCGTGTCCGTTA 57.487 39.130 0.00 0.00 37.80 3.18
581 582 2.973694 ATAGTTATGGCGTGTCCGTT 57.026 45.000 0.00 0.00 37.80 4.44
582 583 4.389890 TTTATAGTTATGGCGTGTCCGT 57.610 40.909 0.00 0.00 37.80 4.69
584 585 8.601476 GCTATTATTTATAGTTATGGCGTGTCC 58.399 37.037 0.00 0.00 38.80 4.02
585 586 9.146984 TGCTATTATTTATAGTTATGGCGTGTC 57.853 33.333 0.00 0.00 38.80 3.67
601 602 8.589338 CCGCCTCTCCTATATATGCTATTATTT 58.411 37.037 0.00 0.00 0.00 1.40
602 603 7.310113 GCCGCCTCTCCTATATATGCTATTATT 60.310 40.741 0.00 0.00 0.00 1.40
604 605 5.477291 GCCGCCTCTCCTATATATGCTATTA 59.523 44.000 0.00 0.00 0.00 0.98
605 606 4.282195 GCCGCCTCTCCTATATATGCTATT 59.718 45.833 0.00 0.00 0.00 1.73
606 607 3.829601 GCCGCCTCTCCTATATATGCTAT 59.170 47.826 0.00 0.00 0.00 2.97
607 608 3.117474 AGCCGCCTCTCCTATATATGCTA 60.117 47.826 0.00 0.00 0.00 3.49
608 609 2.035632 GCCGCCTCTCCTATATATGCT 58.964 52.381 0.00 0.00 0.00 3.79
609 610 2.035632 AGCCGCCTCTCCTATATATGC 58.964 52.381 0.00 0.00 0.00 3.14
610 611 3.291584 TCAGCCGCCTCTCCTATATATG 58.708 50.000 0.00 0.00 0.00 1.78
612 613 3.451402 TTCAGCCGCCTCTCCTATATA 57.549 47.619 0.00 0.00 0.00 0.86
614 615 2.082140 TTTCAGCCGCCTCTCCTATA 57.918 50.000 0.00 0.00 0.00 1.31
617 618 1.204146 TTATTTCAGCCGCCTCTCCT 58.796 50.000 0.00 0.00 0.00 3.69
618 619 2.038387 TTTATTTCAGCCGCCTCTCC 57.962 50.000 0.00 0.00 0.00 3.71
620 621 5.437060 TCTTAATTTATTTCAGCCGCCTCT 58.563 37.500 0.00 0.00 0.00 3.69
621 622 5.751243 TCTTAATTTATTTCAGCCGCCTC 57.249 39.130 0.00 0.00 0.00 4.70
622 623 6.524101 TTTCTTAATTTATTTCAGCCGCCT 57.476 33.333 0.00 0.00 0.00 5.52
623 624 7.770801 ATTTTCTTAATTTATTTCAGCCGCC 57.229 32.000 0.00 0.00 0.00 6.13
635 636 8.686334 ACGGATGCTCACATATTTTCTTAATTT 58.314 29.630 0.00 0.00 36.35 1.82
636 637 8.131100 CACGGATGCTCACATATTTTCTTAATT 58.869 33.333 0.00 0.00 36.35 1.40
639 640 6.112734 ACACGGATGCTCACATATTTTCTTA 58.887 36.000 0.00 0.00 36.35 2.10
641 642 4.517285 ACACGGATGCTCACATATTTTCT 58.483 39.130 0.00 0.00 36.35 2.52
642 643 4.550831 CGACACGGATGCTCACATATTTTC 60.551 45.833 0.00 0.00 36.35 2.29
644 645 2.866156 CGACACGGATGCTCACATATTT 59.134 45.455 0.00 0.00 36.35 1.40
645 646 2.100749 TCGACACGGATGCTCACATATT 59.899 45.455 0.00 0.00 36.35 1.28
646 647 1.681264 TCGACACGGATGCTCACATAT 59.319 47.619 0.00 0.00 36.35 1.78
648 649 0.246360 TTCGACACGGATGCTCACAT 59.754 50.000 0.00 0.00 39.98 3.21
649 650 0.388520 CTTCGACACGGATGCTCACA 60.389 55.000 0.00 0.00 0.00 3.58
650 651 0.388649 ACTTCGACACGGATGCTCAC 60.389 55.000 0.00 0.00 0.00 3.51
651 652 0.109272 GACTTCGACACGGATGCTCA 60.109 55.000 0.00 0.00 0.00 4.26
652 653 0.171455 AGACTTCGACACGGATGCTC 59.829 55.000 0.00 0.00 0.00 4.26
653 654 1.402259 CTAGACTTCGACACGGATGCT 59.598 52.381 0.00 0.00 0.00 3.79
654 655 1.828832 CTAGACTTCGACACGGATGC 58.171 55.000 0.00 0.00 0.00 3.91
655 656 1.132453 TGCTAGACTTCGACACGGATG 59.868 52.381 0.00 0.00 0.00 3.51
656 657 1.132643 GTGCTAGACTTCGACACGGAT 59.867 52.381 0.00 0.00 0.00 4.18
657 658 0.520404 GTGCTAGACTTCGACACGGA 59.480 55.000 0.00 0.00 0.00 4.69
658 659 0.456312 GGTGCTAGACTTCGACACGG 60.456 60.000 0.00 0.00 32.00 4.94
659 660 0.522180 AGGTGCTAGACTTCGACACG 59.478 55.000 0.00 0.00 32.00 4.49
660 661 1.540267 TCAGGTGCTAGACTTCGACAC 59.460 52.381 0.00 0.00 0.00 3.67
661 662 1.905637 TCAGGTGCTAGACTTCGACA 58.094 50.000 0.00 0.00 0.00 4.35
662 663 2.229302 AGTTCAGGTGCTAGACTTCGAC 59.771 50.000 0.00 0.00 0.00 4.20
663 664 2.488545 GAGTTCAGGTGCTAGACTTCGA 59.511 50.000 0.00 0.00 0.00 3.71
665 666 3.508012 TCTGAGTTCAGGTGCTAGACTTC 59.492 47.826 9.13 0.00 43.91 3.01
666 667 3.501349 TCTGAGTTCAGGTGCTAGACTT 58.499 45.455 9.13 0.00 43.91 3.01
670 671 5.590530 AACTATCTGAGTTCAGGTGCTAG 57.409 43.478 9.13 7.86 45.81 3.42
683 684 7.276658 TGGTTTGTTGTAGTTGAACTATCTGA 58.723 34.615 8.46 0.00 32.65 3.27
684 685 7.490962 TGGTTTGTTGTAGTTGAACTATCTG 57.509 36.000 8.46 0.00 32.65 2.90
685 686 7.012989 GGTTGGTTTGTTGTAGTTGAACTATCT 59.987 37.037 8.46 0.00 32.65 1.98
686 687 7.136772 GGTTGGTTTGTTGTAGTTGAACTATC 58.863 38.462 8.46 3.56 32.65 2.08
687 688 6.603997 TGGTTGGTTTGTTGTAGTTGAACTAT 59.396 34.615 8.46 0.00 32.65 2.12
688 689 5.944599 TGGTTGGTTTGTTGTAGTTGAACTA 59.055 36.000 0.00 0.00 0.00 2.24
690 691 5.061920 TGGTTGGTTTGTTGTAGTTGAAC 57.938 39.130 0.00 0.00 0.00 3.18
691 692 5.654650 AGATGGTTGGTTTGTTGTAGTTGAA 59.345 36.000 0.00 0.00 0.00 2.69
693 694 5.514274 AGATGGTTGGTTTGTTGTAGTTG 57.486 39.130 0.00 0.00 0.00 3.16
695 696 6.362248 ACTTAGATGGTTGGTTTGTTGTAGT 58.638 36.000 0.00 0.00 0.00 2.73
697 698 7.033530 CAACTTAGATGGTTGGTTTGTTGTA 57.966 36.000 0.00 0.00 39.97 2.41
698 699 5.901552 CAACTTAGATGGTTGGTTTGTTGT 58.098 37.500 0.00 0.00 39.97 3.32
716 717 1.547901 GGAGCCAACTAAGCCCAACTT 60.548 52.381 0.00 0.00 42.76 2.66
717 718 0.038310 GGAGCCAACTAAGCCCAACT 59.962 55.000 0.00 0.00 0.00 3.16
718 719 0.251165 TGGAGCCAACTAAGCCCAAC 60.251 55.000 0.00 0.00 30.66 3.77
719 720 0.251165 GTGGAGCCAACTAAGCCCAA 60.251 55.000 0.00 0.00 33.98 4.12
720 721 1.378762 GTGGAGCCAACTAAGCCCA 59.621 57.895 0.00 0.00 0.00 5.36
722 723 1.378646 GGGTGGAGCCAACTAAGCC 60.379 63.158 4.32 0.00 39.65 4.35
723 724 1.378646 GGGGTGGAGCCAACTAAGC 60.379 63.158 4.32 0.00 39.65 3.09
724 725 0.253327 GAGGGGTGGAGCCAACTAAG 59.747 60.000 4.32 0.00 39.65 2.18
725 726 0.474854 TGAGGGGTGGAGCCAACTAA 60.475 55.000 4.32 0.00 39.65 2.24
726 727 0.474854 TTGAGGGGTGGAGCCAACTA 60.475 55.000 4.32 0.00 39.65 2.24
727 728 1.142688 ATTGAGGGGTGGAGCCAACT 61.143 55.000 4.32 0.00 39.65 3.16
728 729 0.967380 CATTGAGGGGTGGAGCCAAC 60.967 60.000 0.00 0.00 39.65 3.77
729 730 1.139498 TCATTGAGGGGTGGAGCCAA 61.139 55.000 0.00 0.00 39.65 4.52
730 731 0.920763 ATCATTGAGGGGTGGAGCCA 60.921 55.000 0.00 0.00 39.65 4.75
732 733 1.341383 ACAATCATTGAGGGGTGGAGC 60.341 52.381 3.79 0.00 0.00 4.70
733 734 2.240667 AGACAATCATTGAGGGGTGGAG 59.759 50.000 3.79 0.00 0.00 3.86
735 736 2.814805 AGACAATCATTGAGGGGTGG 57.185 50.000 3.79 0.00 0.00 4.61
736 737 3.367703 GCAAAGACAATCATTGAGGGGTG 60.368 47.826 3.79 0.00 27.31 4.61
737 738 2.827921 GCAAAGACAATCATTGAGGGGT 59.172 45.455 3.79 0.00 27.31 4.95
738 739 3.094572 AGCAAAGACAATCATTGAGGGG 58.905 45.455 3.79 0.00 27.31 4.79
739 740 3.760151 TCAGCAAAGACAATCATTGAGGG 59.240 43.478 3.79 0.00 27.31 4.30
740 741 5.381174 TTCAGCAAAGACAATCATTGAGG 57.619 39.130 3.79 0.00 27.31 3.86
741 742 7.061905 GTCATTTCAGCAAAGACAATCATTGAG 59.938 37.037 3.79 0.00 27.31 3.02
742 743 6.864685 GTCATTTCAGCAAAGACAATCATTGA 59.135 34.615 3.79 0.00 27.31 2.57
743 744 6.090358 GGTCATTTCAGCAAAGACAATCATTG 59.910 38.462 0.00 0.00 0.00 2.82
744 745 6.014840 AGGTCATTTCAGCAAAGACAATCATT 60.015 34.615 0.00 0.00 0.00 2.57
745 746 5.479375 AGGTCATTTCAGCAAAGACAATCAT 59.521 36.000 0.00 0.00 0.00 2.45
746 747 4.828939 AGGTCATTTCAGCAAAGACAATCA 59.171 37.500 0.00 0.00 0.00 2.57
747 748 5.382618 AGGTCATTTCAGCAAAGACAATC 57.617 39.130 0.00 0.00 0.00 2.67
748 749 5.279156 GGAAGGTCATTTCAGCAAAGACAAT 60.279 40.000 0.00 0.00 0.00 2.71
749 750 4.037923 GGAAGGTCATTTCAGCAAAGACAA 59.962 41.667 0.00 0.00 0.00 3.18
750 751 3.569701 GGAAGGTCATTTCAGCAAAGACA 59.430 43.478 0.00 0.00 0.00 3.41
751 752 3.569701 TGGAAGGTCATTTCAGCAAAGAC 59.430 43.478 0.00 0.00 0.00 3.01
752 753 3.569701 GTGGAAGGTCATTTCAGCAAAGA 59.430 43.478 0.00 0.00 0.00 2.52
753 754 3.610114 CGTGGAAGGTCATTTCAGCAAAG 60.610 47.826 0.00 0.00 0.00 2.77
754 755 2.293122 CGTGGAAGGTCATTTCAGCAAA 59.707 45.455 0.00 0.00 0.00 3.68
755 756 1.879380 CGTGGAAGGTCATTTCAGCAA 59.121 47.619 0.00 0.00 0.00 3.91
756 757 1.522668 CGTGGAAGGTCATTTCAGCA 58.477 50.000 0.00 0.00 0.00 4.41
757 758 0.169009 GCGTGGAAGGTCATTTCAGC 59.831 55.000 0.00 0.00 0.00 4.26
758 759 0.804989 GGCGTGGAAGGTCATTTCAG 59.195 55.000 0.00 0.00 0.00 3.02
759 760 0.400213 AGGCGTGGAAGGTCATTTCA 59.600 50.000 0.00 0.00 0.00 2.69
760 761 2.396590 TAGGCGTGGAAGGTCATTTC 57.603 50.000 0.00 0.00 0.00 2.17
761 762 2.871096 TTAGGCGTGGAAGGTCATTT 57.129 45.000 0.00 0.00 0.00 2.32
762 763 2.871096 TTTAGGCGTGGAAGGTCATT 57.129 45.000 0.00 0.00 0.00 2.57
763 764 2.238646 TCATTTAGGCGTGGAAGGTCAT 59.761 45.455 0.00 0.00 0.00 3.06
764 765 1.626321 TCATTTAGGCGTGGAAGGTCA 59.374 47.619 0.00 0.00 0.00 4.02
765 766 2.396590 TCATTTAGGCGTGGAAGGTC 57.603 50.000 0.00 0.00 0.00 3.85
766 767 3.016736 CAATCATTTAGGCGTGGAAGGT 58.983 45.455 0.00 0.00 0.00 3.50
767 768 3.278574 TCAATCATTTAGGCGTGGAAGG 58.721 45.455 0.00 0.00 0.00 3.46
769 770 4.515191 GCTATCAATCATTTAGGCGTGGAA 59.485 41.667 0.00 0.00 0.00 3.53
771 772 3.814842 TGCTATCAATCATTTAGGCGTGG 59.185 43.478 0.00 0.00 0.00 4.94
772 773 5.422666 TTGCTATCAATCATTTAGGCGTG 57.577 39.130 0.00 0.00 0.00 5.34
773 774 7.744087 TTATTGCTATCAATCATTTAGGCGT 57.256 32.000 0.00 0.00 41.68 5.68
774 775 9.282247 GAATTATTGCTATCAATCATTTAGGCG 57.718 33.333 0.00 0.00 41.68 5.52
798 799 8.378565 CCCCAGAAGATAAGCTAGAATATTGAA 58.621 37.037 0.00 0.00 0.00 2.69
799 800 7.527868 GCCCCAGAAGATAAGCTAGAATATTGA 60.528 40.741 0.00 0.00 0.00 2.57
800 801 6.597280 GCCCCAGAAGATAAGCTAGAATATTG 59.403 42.308 0.00 0.00 0.00 1.90
801 802 6.273260 TGCCCCAGAAGATAAGCTAGAATATT 59.727 38.462 0.00 0.00 0.00 1.28
803 804 5.155161 TGCCCCAGAAGATAAGCTAGAATA 58.845 41.667 0.00 0.00 0.00 1.75
805 806 3.384168 TGCCCCAGAAGATAAGCTAGAA 58.616 45.455 0.00 0.00 0.00 2.10
806 807 3.046283 TGCCCCAGAAGATAAGCTAGA 57.954 47.619 0.00 0.00 0.00 2.43
807 808 3.582208 AGATGCCCCAGAAGATAAGCTAG 59.418 47.826 0.00 0.00 0.00 3.42
808 809 3.580458 GAGATGCCCCAGAAGATAAGCTA 59.420 47.826 0.00 0.00 0.00 3.32
810 811 2.371510 AGAGATGCCCCAGAAGATAAGC 59.628 50.000 0.00 0.00 0.00 3.09
811 812 4.703379 AAGAGATGCCCCAGAAGATAAG 57.297 45.455 0.00 0.00 0.00 1.73
812 813 4.968719 TGTAAGAGATGCCCCAGAAGATAA 59.031 41.667 0.00 0.00 0.00 1.75
813 814 4.556697 TGTAAGAGATGCCCCAGAAGATA 58.443 43.478 0.00 0.00 0.00 1.98
815 816 2.832838 TGTAAGAGATGCCCCAGAAGA 58.167 47.619 0.00 0.00 0.00 2.87
817 818 2.026262 GGTTGTAAGAGATGCCCCAGAA 60.026 50.000 0.00 0.00 0.00 3.02
818 819 1.559682 GGTTGTAAGAGATGCCCCAGA 59.440 52.381 0.00 0.00 0.00 3.86
819 820 1.281867 TGGTTGTAAGAGATGCCCCAG 59.718 52.381 0.00 0.00 0.00 4.45
820 821 1.367346 TGGTTGTAAGAGATGCCCCA 58.633 50.000 0.00 0.00 0.00 4.96
821 822 2.369394 CTTGGTTGTAAGAGATGCCCC 58.631 52.381 0.00 0.00 0.00 5.80
822 823 1.745653 GCTTGGTTGTAAGAGATGCCC 59.254 52.381 0.00 0.00 0.00 5.36
823 824 2.436417 TGCTTGGTTGTAAGAGATGCC 58.564 47.619 0.00 0.00 0.00 4.40
824 825 4.439289 GGATTGCTTGGTTGTAAGAGATGC 60.439 45.833 0.00 0.00 0.00 3.91
825 826 4.096984 GGGATTGCTTGGTTGTAAGAGATG 59.903 45.833 0.00 0.00 0.00 2.90
826 827 4.273318 GGGATTGCTTGGTTGTAAGAGAT 58.727 43.478 0.00 0.00 0.00 2.75
827 828 3.686016 GGGATTGCTTGGTTGTAAGAGA 58.314 45.455 0.00 0.00 0.00 3.10
828 829 2.420022 CGGGATTGCTTGGTTGTAAGAG 59.580 50.000 0.00 0.00 0.00 2.85
829 830 2.432444 CGGGATTGCTTGGTTGTAAGA 58.568 47.619 0.00 0.00 0.00 2.10
830 831 1.472480 CCGGGATTGCTTGGTTGTAAG 59.528 52.381 0.00 0.00 0.00 2.34
831 832 1.074084 TCCGGGATTGCTTGGTTGTAA 59.926 47.619 0.00 0.00 0.00 2.41
832 833 0.693622 TCCGGGATTGCTTGGTTGTA 59.306 50.000 0.00 0.00 0.00 2.41
834 835 0.609131 ACTCCGGGATTGCTTGGTTG 60.609 55.000 0.00 0.00 0.00 3.77
835 836 0.988832 TACTCCGGGATTGCTTGGTT 59.011 50.000 0.00 0.00 0.00 3.67
837 838 2.104111 TGTATACTCCGGGATTGCTTGG 59.896 50.000 0.00 0.00 0.00 3.61
838 839 3.131396 GTGTATACTCCGGGATTGCTTG 58.869 50.000 0.00 0.00 0.00 4.01
840 841 1.340248 CGTGTATACTCCGGGATTGCT 59.660 52.381 0.00 0.00 0.00 3.91
841 842 1.068127 ACGTGTATACTCCGGGATTGC 59.932 52.381 16.27 0.00 0.00 3.56
842 843 2.359848 TGACGTGTATACTCCGGGATTG 59.640 50.000 16.27 0.00 0.00 2.67
1810 3769 0.320771 AACGCAGCGAGATTCTTGGT 60.321 50.000 24.65 0.00 0.00 3.67
2573 4560 5.003804 GTGTGGTGGAAACTTAGATGTGAT 58.996 41.667 0.00 0.00 0.00 3.06
2659 4646 0.323725 AACCAGGGGCATAGCAACTG 60.324 55.000 0.00 5.53 34.96 3.16
2913 4912 5.877012 TCTCTCTTCTTTTATCATGTGCCAC 59.123 40.000 0.00 0.00 0.00 5.01
3098 5097 8.355913 TGCAACAGTTTGTATGTTCAATCATTA 58.644 29.630 0.00 0.00 38.80 1.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.