Multiple sequence alignment - TraesCS2A01G593700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G593700 chr2A 100.000 6966 0 0 1 6966 780720898 780713933 0.000000e+00 12864
1 TraesCS2A01G593700 chr2A 94.203 69 4 0 2967 3035 780717863 780717795 9.560000e-19 106
2 TraesCS2A01G593700 chr2A 94.203 69 4 0 3036 3104 780717932 780717864 9.560000e-19 106
3 TraesCS2A01G593700 chr2D 95.458 2312 62 11 1807 4090 633601373 633603669 0.000000e+00 3648
4 TraesCS2A01G593700 chr2D 95.060 2166 84 17 4211 6362 633604326 633606482 0.000000e+00 3386
5 TraesCS2A01G593700 chr2D 89.867 1648 114 29 193 1811 633599558 633601181 0.000000e+00 2069
6 TraesCS2A01G593700 chr2D 85.380 171 22 2 1345 1513 333352812 333352643 2.580000e-39 174
7 TraesCS2A01G593700 chr2D 97.101 69 2 0 3036 3104 633602530 633602598 4.410000e-22 117
8 TraesCS2A01G593700 chr2D 95.652 69 3 0 2967 3035 633602599 633602667 2.050000e-20 111
9 TraesCS2A01G593700 chr2B 95.599 1386 56 4 1878 3258 776695351 776696736 0.000000e+00 2217
10 TraesCS2A01G593700 chr2B 91.076 1468 101 15 4908 6362 776698221 776699671 0.000000e+00 1958
11 TraesCS2A01G593700 chr2B 90.547 1481 93 23 3472 4909 776696795 776698271 0.000000e+00 1916
12 TraesCS2A01G593700 chr2B 90.274 1388 82 26 504 1872 776693880 776695233 0.000000e+00 1766
13 TraesCS2A01G593700 chr2B 86.047 387 27 11 6381 6741 776699658 776700043 2.360000e-104 390
14 TraesCS2A01G593700 chr2B 98.077 156 3 0 1 156 24866065 24865910 8.900000e-69 272
15 TraesCS2A01G593700 chr2B 96.855 159 4 1 1 159 26065832 26065989 1.490000e-66 265
16 TraesCS2A01G593700 chr2B 93.413 167 10 1 3400 3566 65245834 65245999 5.400000e-61 246
17 TraesCS2A01G593700 chr2B 85.965 171 21 2 1345 1513 750563150 750562981 5.550000e-41 180
18 TraesCS2A01G593700 chr2B 93.519 108 6 1 206 312 776686783 776686890 7.230000e-35 159
19 TraesCS2A01G593700 chr2B 95.652 69 3 0 3036 3104 776696445 776696513 2.050000e-20 111
20 TraesCS2A01G593700 chr2B 95.652 69 3 0 2967 3035 776696514 776696582 2.050000e-20 111
21 TraesCS2A01G593700 chr2B 91.139 79 7 0 6830 6908 776700040 776700118 2.660000e-19 108
22 TraesCS2A01G593700 chr1D 91.765 510 35 4 3400 3902 404758534 404758025 0.000000e+00 702
23 TraesCS2A01G593700 chr1D 84.795 171 23 2 1345 1513 233021202 233021033 1.200000e-37 169
24 TraesCS2A01G593700 chr6A 87.843 510 43 8 3400 3902 505924762 505924265 1.300000e-161 580
25 TraesCS2A01G593700 chr6A 84.181 177 23 4 1336 1509 152805246 152805420 4.320000e-37 167
26 TraesCS2A01G593700 chr3B 90.085 353 28 3 3400 3745 763575374 763575726 1.070000e-122 451
27 TraesCS2A01G593700 chr3B 86.550 171 20 2 1345 1513 519492590 519492421 1.190000e-42 185
28 TraesCS2A01G593700 chr3B 85.380 171 22 2 1345 1513 545614798 545614629 2.580000e-39 174
29 TraesCS2A01G593700 chr3B 84.270 178 24 4 1339 1513 545528971 545528795 3.340000e-38 171
30 TraesCS2A01G593700 chr5A 99.338 151 1 0 1 151 634019132 634018982 2.480000e-69 274
31 TraesCS2A01G593700 chr5A 98.684 152 2 0 1 152 600290366 600290215 3.200000e-68 270
32 TraesCS2A01G593700 chr3A 99.333 150 1 0 1 150 686167520 686167371 8.900000e-69 272
33 TraesCS2A01G593700 chrUn 97.436 156 4 0 1 156 200950358 200950203 4.140000e-67 267
34 TraesCS2A01G593700 chrUn 92.216 167 12 1 3400 3566 317046963 317046798 1.170000e-57 235
35 TraesCS2A01G593700 chrUn 92.216 167 12 1 3400 3566 317241629 317241464 1.170000e-57 235
36 TraesCS2A01G593700 chrUn 92.216 167 12 1 3400 3566 398147310 398147475 1.170000e-57 235
37 TraesCS2A01G593700 chr4A 97.436 156 4 0 1 156 744205178 744205023 4.140000e-67 267
38 TraesCS2A01G593700 chr4A 89.423 208 21 1 3695 3902 367694491 367694697 1.930000e-65 261
39 TraesCS2A01G593700 chr1A 98.039 153 3 0 1 153 516695370 516695522 4.140000e-67 267
40 TraesCS2A01G593700 chr7A 94.118 170 7 3 1 167 21815671 21815840 8.970000e-64 255


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G593700 chr2A 780713933 780720898 6965 True 4358.666667 12864 96.135333 1 6966 3 chr2A.!!$R1 6965
1 TraesCS2A01G593700 chr2D 633599558 633606482 6924 False 1866.200000 3648 94.627600 193 6362 5 chr2D.!!$F1 6169
2 TraesCS2A01G593700 chr2B 776693880 776700118 6238 False 1072.125000 2217 91.998250 504 6908 8 chr2B.!!$F4 6404
3 TraesCS2A01G593700 chr1D 404758025 404758534 509 True 702.000000 702 91.765000 3400 3902 1 chr1D.!!$R2 502

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
89 90 0.035152 ATGCGAGCACCAGGATTTGA 60.035 50.0 0.00 0.00 0.00 2.69 F
493 497 0.099791 CTTTCTCGCTCTCTCCGACC 59.900 60.0 0.00 0.00 0.00 4.79 F
820 845 0.318120 GCCAACAATCCCACACCAAG 59.682 55.0 0.00 0.00 0.00 3.61 F
902 928 0.963962 ACTTCCGCGGTCTCTAACAA 59.036 50.0 27.15 8.35 0.00 2.83 F
1362 1397 1.051812 CCCTCTGGTGTGAAGTGAGT 58.948 55.0 0.00 0.00 0.00 3.41 F
3045 3396 0.534203 CACCAACTAACACGCCTGGT 60.534 55.0 0.00 0.00 41.08 4.00 F
4424 5346 0.239347 GTTCGACATTGCAGCTGCTT 59.761 50.0 36.61 22.65 42.66 3.91 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1597 1633 1.594397 CTACATATGCACGCCACACAG 59.406 52.381 1.58 0.00 0.00 3.66 R
1600 1636 1.650825 CACTACATATGCACGCCACA 58.349 50.000 1.58 0.00 0.00 4.17 R
2674 3025 1.305219 GCTATTGACAGTTGCCGGCA 61.305 55.000 29.03 29.03 0.00 5.69 R
2817 3168 2.089201 AGTTATACCGCCAAAAGGTGC 58.911 47.619 0.00 0.00 42.83 5.01 R
3313 3664 1.422531 ACAAAGCTTTGCCATTCCCA 58.577 45.000 33.72 0.00 41.79 4.37 R
4657 5579 0.179048 TGCTGGCATGGAATCCTACG 60.179 55.000 0.00 0.00 0.00 3.51 R
6365 7313 0.107831 CCACTCTCCACCGTTTTCCA 59.892 55.000 0.00 0.00 0.00 3.53 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 4.115270 GGAACGTCTCCTCCCACT 57.885 61.111 8.87 0.00 41.61 4.00
29 30 1.592223 GGAACGTCTCCTCCCACTG 59.408 63.158 8.87 0.00 41.61 3.66
30 31 0.898789 GGAACGTCTCCTCCCACTGA 60.899 60.000 8.87 0.00 41.61 3.41
31 32 0.966920 GAACGTCTCCTCCCACTGAA 59.033 55.000 0.00 0.00 0.00 3.02
32 33 1.343465 GAACGTCTCCTCCCACTGAAA 59.657 52.381 0.00 0.00 0.00 2.69
33 34 0.969894 ACGTCTCCTCCCACTGAAAG 59.030 55.000 0.00 0.00 42.29 2.62
34 35 0.390472 CGTCTCCTCCCACTGAAAGC 60.390 60.000 0.00 0.00 37.60 3.51
35 36 0.390472 GTCTCCTCCCACTGAAAGCG 60.390 60.000 0.00 0.00 37.60 4.68
36 37 1.743252 CTCCTCCCACTGAAAGCGC 60.743 63.158 0.00 0.00 37.60 5.92
37 38 2.032528 CCTCCCACTGAAAGCGCA 59.967 61.111 11.47 0.00 37.60 6.09
38 39 1.377725 CCTCCCACTGAAAGCGCAT 60.378 57.895 11.47 0.00 37.60 4.73
39 40 1.372087 CCTCCCACTGAAAGCGCATC 61.372 60.000 11.47 8.39 37.60 3.91
40 41 1.699656 CTCCCACTGAAAGCGCATCG 61.700 60.000 11.47 6.82 37.60 3.84
51 52 2.588877 CGCATCGCCGGAAATCCT 60.589 61.111 5.05 0.00 0.00 3.24
52 53 2.885676 CGCATCGCCGGAAATCCTG 61.886 63.158 5.05 0.00 0.00 3.86
53 54 1.523711 GCATCGCCGGAAATCCTGA 60.524 57.895 5.05 0.00 0.00 3.86
54 55 1.095228 GCATCGCCGGAAATCCTGAA 61.095 55.000 5.05 0.00 0.00 3.02
55 56 1.378531 CATCGCCGGAAATCCTGAAA 58.621 50.000 5.05 0.00 0.00 2.69
56 57 1.949525 CATCGCCGGAAATCCTGAAAT 59.050 47.619 5.05 0.00 0.00 2.17
57 58 2.992124 TCGCCGGAAATCCTGAAATA 57.008 45.000 5.05 0.00 0.00 1.40
58 59 3.269538 TCGCCGGAAATCCTGAAATAA 57.730 42.857 5.05 0.00 0.00 1.40
59 60 3.611970 TCGCCGGAAATCCTGAAATAAA 58.388 40.909 5.05 0.00 0.00 1.40
60 61 4.204012 TCGCCGGAAATCCTGAAATAAAT 58.796 39.130 5.05 0.00 0.00 1.40
61 62 4.274950 TCGCCGGAAATCCTGAAATAAATC 59.725 41.667 5.05 0.00 0.00 2.17
62 63 4.556699 CGCCGGAAATCCTGAAATAAATCC 60.557 45.833 5.05 0.00 0.00 3.01
63 64 4.340950 GCCGGAAATCCTGAAATAAATCCA 59.659 41.667 5.05 0.00 0.00 3.41
64 65 5.163457 GCCGGAAATCCTGAAATAAATCCAA 60.163 40.000 5.05 0.00 0.00 3.53
65 66 6.507023 CCGGAAATCCTGAAATAAATCCAAG 58.493 40.000 0.00 0.00 0.00 3.61
66 67 6.321181 CCGGAAATCCTGAAATAAATCCAAGA 59.679 38.462 0.00 0.00 0.00 3.02
67 68 7.147915 CCGGAAATCCTGAAATAAATCCAAGAA 60.148 37.037 0.00 0.00 0.00 2.52
68 69 8.416329 CGGAAATCCTGAAATAAATCCAAGAAT 58.584 33.333 0.00 0.00 0.00 2.40
74 75 8.352201 TCCTGAAATAAATCCAAGAATAATGCG 58.648 33.333 0.00 0.00 0.00 4.73
75 76 8.352201 CCTGAAATAAATCCAAGAATAATGCGA 58.648 33.333 0.00 0.00 0.00 5.10
76 77 9.390795 CTGAAATAAATCCAAGAATAATGCGAG 57.609 33.333 0.00 0.00 0.00 5.03
77 78 7.862372 TGAAATAAATCCAAGAATAATGCGAGC 59.138 33.333 0.00 0.00 0.00 5.03
78 79 6.882610 ATAAATCCAAGAATAATGCGAGCA 57.117 33.333 0.00 0.00 0.00 4.26
79 80 4.558538 AATCCAAGAATAATGCGAGCAC 57.441 40.909 0.00 0.00 0.00 4.40
80 81 2.288666 TCCAAGAATAATGCGAGCACC 58.711 47.619 0.00 0.00 0.00 5.01
81 82 2.016318 CCAAGAATAATGCGAGCACCA 58.984 47.619 0.00 0.00 0.00 4.17
82 83 2.032550 CCAAGAATAATGCGAGCACCAG 59.967 50.000 0.00 0.00 0.00 4.00
83 84 1.959042 AGAATAATGCGAGCACCAGG 58.041 50.000 0.00 0.00 0.00 4.45
84 85 1.486310 AGAATAATGCGAGCACCAGGA 59.514 47.619 0.00 0.00 0.00 3.86
85 86 2.105477 AGAATAATGCGAGCACCAGGAT 59.895 45.455 0.00 0.00 0.00 3.24
86 87 2.645838 ATAATGCGAGCACCAGGATT 57.354 45.000 0.00 0.00 33.17 3.01
87 88 2.418368 TAATGCGAGCACCAGGATTT 57.582 45.000 0.00 0.00 31.11 2.17
88 89 0.813184 AATGCGAGCACCAGGATTTG 59.187 50.000 0.00 0.00 0.00 2.32
89 90 0.035152 ATGCGAGCACCAGGATTTGA 60.035 50.000 0.00 0.00 0.00 2.69
90 91 0.250684 TGCGAGCACCAGGATTTGAA 60.251 50.000 0.00 0.00 0.00 2.69
91 92 0.169009 GCGAGCACCAGGATTTGAAC 59.831 55.000 0.00 0.00 0.00 3.18
92 93 0.804989 CGAGCACCAGGATTTGAACC 59.195 55.000 0.00 0.00 0.00 3.62
93 94 1.177401 GAGCACCAGGATTTGAACCC 58.823 55.000 0.00 0.00 0.00 4.11
94 95 0.779997 AGCACCAGGATTTGAACCCT 59.220 50.000 0.00 0.00 0.00 4.34
99 100 1.549203 CAGGATTTGAACCCTGGTGG 58.451 55.000 0.00 0.00 44.68 4.61
109 110 4.179896 CCTGGTGGGTTGGGGATA 57.820 61.111 0.00 0.00 0.00 2.59
110 111 2.645604 CCTGGTGGGTTGGGGATAT 58.354 57.895 0.00 0.00 0.00 1.63
111 112 0.478507 CCTGGTGGGTTGGGGATATC 59.521 60.000 0.00 0.00 0.00 1.63
112 113 1.221635 CTGGTGGGTTGGGGATATCA 58.778 55.000 4.83 0.00 0.00 2.15
113 114 0.923358 TGGTGGGTTGGGGATATCAC 59.077 55.000 4.83 0.00 0.00 3.06
114 115 1.222567 GGTGGGTTGGGGATATCACT 58.777 55.000 4.65 0.00 0.00 3.41
115 116 1.133792 GGTGGGTTGGGGATATCACTG 60.134 57.143 4.65 0.00 0.00 3.66
116 117 1.564348 GTGGGTTGGGGATATCACTGT 59.436 52.381 4.65 0.00 0.00 3.55
117 118 1.843851 TGGGTTGGGGATATCACTGTC 59.156 52.381 4.65 0.00 0.00 3.51
118 119 1.143073 GGGTTGGGGATATCACTGTCC 59.857 57.143 4.65 4.82 32.06 4.02
119 120 1.843851 GGTTGGGGATATCACTGTCCA 59.156 52.381 4.65 1.40 34.44 4.02
120 121 2.421529 GGTTGGGGATATCACTGTCCAC 60.422 54.545 4.65 0.00 36.63 4.02
121 122 1.507140 TGGGGATATCACTGTCCACC 58.493 55.000 4.65 0.00 35.25 4.61
122 123 1.009552 TGGGGATATCACTGTCCACCT 59.990 52.381 4.65 0.00 35.25 4.00
123 124 2.248950 TGGGGATATCACTGTCCACCTA 59.751 50.000 4.65 0.00 35.25 3.08
124 125 3.311028 TGGGGATATCACTGTCCACCTAA 60.311 47.826 4.65 0.00 35.25 2.69
125 126 3.071167 GGGGATATCACTGTCCACCTAAC 59.929 52.174 4.65 0.00 34.44 2.34
126 127 3.071167 GGGATATCACTGTCCACCTAACC 59.929 52.174 4.83 0.00 34.44 2.85
127 128 3.709653 GGATATCACTGTCCACCTAACCA 59.290 47.826 4.83 0.00 33.05 3.67
128 129 4.163458 GGATATCACTGTCCACCTAACCAA 59.837 45.833 4.83 0.00 33.05 3.67
129 130 2.922740 TCACTGTCCACCTAACCAAC 57.077 50.000 0.00 0.00 0.00 3.77
130 131 2.404559 TCACTGTCCACCTAACCAACT 58.595 47.619 0.00 0.00 0.00 3.16
131 132 2.367567 TCACTGTCCACCTAACCAACTC 59.632 50.000 0.00 0.00 0.00 3.01
132 133 2.104111 CACTGTCCACCTAACCAACTCA 59.896 50.000 0.00 0.00 0.00 3.41
133 134 2.775384 ACTGTCCACCTAACCAACTCAA 59.225 45.455 0.00 0.00 0.00 3.02
134 135 3.139077 CTGTCCACCTAACCAACTCAAC 58.861 50.000 0.00 0.00 0.00 3.18
135 136 2.158726 TGTCCACCTAACCAACTCAACC 60.159 50.000 0.00 0.00 0.00 3.77
136 137 2.128535 TCCACCTAACCAACTCAACCA 58.871 47.619 0.00 0.00 0.00 3.67
137 138 2.158726 TCCACCTAACCAACTCAACCAC 60.159 50.000 0.00 0.00 0.00 4.16
138 139 2.422235 CCACCTAACCAACTCAACCACA 60.422 50.000 0.00 0.00 0.00 4.17
139 140 2.878406 CACCTAACCAACTCAACCACAG 59.122 50.000 0.00 0.00 0.00 3.66
140 141 2.158667 ACCTAACCAACTCAACCACAGG 60.159 50.000 0.00 0.00 0.00 4.00
141 142 2.158667 CCTAACCAACTCAACCACAGGT 60.159 50.000 0.00 0.00 37.65 4.00
150 151 3.412722 AACCACAGGTTGATTCGCA 57.587 47.368 0.00 0.00 45.07 5.10
151 152 1.686355 AACCACAGGTTGATTCGCAA 58.314 45.000 0.00 0.00 45.07 4.85
159 160 2.594529 GTTGATTCGCAACGACATGT 57.405 45.000 0.00 0.00 46.50 3.21
160 161 2.495939 GTTGATTCGCAACGACATGTC 58.504 47.619 16.21 16.21 46.50 3.06
161 162 2.078849 TGATTCGCAACGACATGTCT 57.921 45.000 22.95 8.01 34.89 3.41
162 163 1.726248 TGATTCGCAACGACATGTCTG 59.274 47.619 22.95 16.17 34.89 3.51
163 164 1.726791 GATTCGCAACGACATGTCTGT 59.273 47.619 22.95 18.43 38.67 3.41
164 165 1.577468 TTCGCAACGACATGTCTGTT 58.423 45.000 22.95 22.43 35.14 3.16
165 166 2.425578 TCGCAACGACATGTCTGTTA 57.574 45.000 25.06 14.06 35.14 2.41
166 167 2.954316 TCGCAACGACATGTCTGTTAT 58.046 42.857 25.06 10.68 35.14 1.89
167 168 2.921121 TCGCAACGACATGTCTGTTATC 59.079 45.455 25.06 20.04 35.14 1.75
168 169 2.923655 CGCAACGACATGTCTGTTATCT 59.076 45.455 25.06 9.88 35.14 1.98
169 170 4.102649 CGCAACGACATGTCTGTTATCTA 58.897 43.478 25.06 0.00 35.14 1.98
170 171 4.561213 CGCAACGACATGTCTGTTATCTAA 59.439 41.667 25.06 0.00 35.14 2.10
171 172 5.498700 CGCAACGACATGTCTGTTATCTAAC 60.499 44.000 25.06 14.59 35.14 2.34
172 173 5.498700 GCAACGACATGTCTGTTATCTAACG 60.499 44.000 25.06 16.50 39.00 3.18
173 174 5.556355 ACGACATGTCTGTTATCTAACGA 57.444 39.130 22.95 0.00 39.00 3.85
174 175 5.946298 ACGACATGTCTGTTATCTAACGAA 58.054 37.500 22.95 0.00 39.00 3.85
175 176 6.384224 ACGACATGTCTGTTATCTAACGAAA 58.616 36.000 22.95 0.00 39.00 3.46
176 177 7.033791 ACGACATGTCTGTTATCTAACGAAAT 58.966 34.615 22.95 0.00 39.00 2.17
177 178 7.544566 ACGACATGTCTGTTATCTAACGAAATT 59.455 33.333 22.95 0.00 39.00 1.82
178 179 8.050750 CGACATGTCTGTTATCTAACGAAATTC 58.949 37.037 22.95 0.00 39.00 2.17
179 180 9.088512 GACATGTCTGTTATCTAACGAAATTCT 57.911 33.333 18.83 0.00 39.00 2.40
180 181 8.873830 ACATGTCTGTTATCTAACGAAATTCTG 58.126 33.333 0.00 0.00 39.00 3.02
181 182 8.873830 CATGTCTGTTATCTAACGAAATTCTGT 58.126 33.333 0.00 0.00 39.00 3.41
182 183 8.827177 TGTCTGTTATCTAACGAAATTCTGTT 57.173 30.769 0.00 7.92 39.00 3.16
183 184 8.708742 TGTCTGTTATCTAACGAAATTCTGTTG 58.291 33.333 11.41 4.70 39.00 3.33
184 185 8.709646 GTCTGTTATCTAACGAAATTCTGTTGT 58.290 33.333 11.41 3.58 39.00 3.32
185 186 9.268268 TCTGTTATCTAACGAAATTCTGTTGTT 57.732 29.630 11.41 2.52 39.00 2.83
186 187 9.878599 CTGTTATCTAACGAAATTCTGTTGTTT 57.121 29.630 11.41 0.00 39.00 2.83
273 276 2.660802 CTAAACGGACCGGCCTGT 59.339 61.111 20.00 0.00 0.00 4.00
288 291 1.972872 CCTGTGACAGGCCCATTATC 58.027 55.000 20.01 0.00 45.13 1.75
304 307 3.819920 TCGGCAGCGCTGAGAGAG 61.820 66.667 40.21 23.27 39.19 3.20
312 315 4.219999 GCTGAGAGAGCGGGCCTC 62.220 72.222 0.84 0.00 38.15 4.70
313 316 3.535962 CTGAGAGAGCGGGCCTCC 61.536 72.222 0.84 0.00 41.74 4.30
314 317 4.067512 TGAGAGAGCGGGCCTCCT 62.068 66.667 0.84 0.00 41.74 3.69
315 318 2.762043 GAGAGAGCGGGCCTCCTT 60.762 66.667 0.84 0.00 41.74 3.36
317 320 3.855853 GAGAGCGGGCCTCCTTCC 61.856 72.222 0.84 0.00 41.74 3.46
321 324 4.491409 GCGGGCCTCCTTCCCTTC 62.491 72.222 0.84 0.00 41.69 3.46
322 325 3.798511 CGGGCCTCCTTCCCTTCC 61.799 72.222 0.84 0.00 41.69 3.46
323 326 3.421386 GGGCCTCCTTCCCTTCCC 61.421 72.222 0.84 0.00 40.66 3.97
324 327 2.286502 GGCCTCCTTCCCTTCCCT 60.287 66.667 0.00 0.00 0.00 4.20
343 346 2.553247 CCTTCCCTTCCACACCTTTCTC 60.553 54.545 0.00 0.00 0.00 2.87
356 359 3.055458 CACCTTTCTCTTCTCTTCCTCCC 60.055 52.174 0.00 0.00 0.00 4.30
357 360 3.177228 CCTTTCTCTTCTCTTCCTCCCA 58.823 50.000 0.00 0.00 0.00 4.37
358 361 3.197549 CCTTTCTCTTCTCTTCCTCCCAG 59.802 52.174 0.00 0.00 0.00 4.45
476 480 4.394712 CTCTTCCCCGCACCGCTT 62.395 66.667 0.00 0.00 0.00 4.68
491 495 1.803943 GCTTTCTCGCTCTCTCCGA 59.196 57.895 0.00 0.00 0.00 4.55
493 497 0.099791 CTTTCTCGCTCTCTCCGACC 59.900 60.000 0.00 0.00 0.00 4.79
494 498 0.608308 TTTCTCGCTCTCTCCGACCA 60.608 55.000 0.00 0.00 0.00 4.02
496 500 2.750637 TCGCTCTCTCCGACCACC 60.751 66.667 0.00 0.00 0.00 4.61
498 502 2.363147 GCTCTCTCCGACCACCCT 60.363 66.667 0.00 0.00 0.00 4.34
650 670 1.241315 AAATCCCAACCGCACCTTCG 61.241 55.000 0.00 0.00 0.00 3.79
720 740 1.249407 GTCTAGATCCGCCCCTAGTG 58.751 60.000 0.00 0.00 35.20 2.74
740 765 2.097038 CAGCTCTCGGCCTCAAACG 61.097 63.158 0.00 0.00 43.05 3.60
741 766 3.491652 GCTCTCGGCCTCAAACGC 61.492 66.667 0.00 0.00 34.27 4.84
747 772 1.669760 CGGCCTCAAACGCTGGTAA 60.670 57.895 0.00 0.00 0.00 2.85
779 804 0.319040 CACCTATGCATCGCGCTACT 60.319 55.000 0.19 0.00 43.06 2.57
804 829 3.056107 AGACGCTCTACTGTTTATTGCCA 60.056 43.478 0.00 0.00 0.00 4.92
805 830 3.670625 ACGCTCTACTGTTTATTGCCAA 58.329 40.909 0.00 0.00 0.00 4.52
806 831 3.435671 ACGCTCTACTGTTTATTGCCAAC 59.564 43.478 0.00 0.00 0.00 3.77
818 843 0.397675 TTGCCAACAATCCCACACCA 60.398 50.000 0.00 0.00 0.00 4.17
819 844 0.397675 TGCCAACAATCCCACACCAA 60.398 50.000 0.00 0.00 0.00 3.67
820 845 0.318120 GCCAACAATCCCACACCAAG 59.682 55.000 0.00 0.00 0.00 3.61
821 846 1.703411 CCAACAATCCCACACCAAGT 58.297 50.000 0.00 0.00 0.00 3.16
902 928 0.963962 ACTTCCGCGGTCTCTAACAA 59.036 50.000 27.15 8.35 0.00 2.83
943 969 8.807667 ATTTCTGTTGATTTTTCTTGCTGTAG 57.192 30.769 0.00 0.00 0.00 2.74
971 997 3.119849 GCCTCTGTTAATTCGTTGCACAT 60.120 43.478 0.00 0.00 0.00 3.21
1042 1068 1.837051 CCCCATACAGGAGCCGCTA 60.837 63.158 0.00 0.00 41.22 4.26
1131 1160 2.084610 TGGACACTTCTTCATCTGCG 57.915 50.000 0.00 0.00 0.00 5.18
1160 1191 1.690283 CGCGGCATCTCAGTCACTTG 61.690 60.000 0.00 0.00 0.00 3.16
1163 1194 2.625737 CGGCATCTCAGTCACTTGATT 58.374 47.619 0.00 0.00 0.00 2.57
1215 1249 7.076842 TCATGTTTATTGTTTCAGCTCTAGC 57.923 36.000 0.00 0.00 42.49 3.42
1242 1276 7.841729 TGAAGTCCTTTCTGAATATCTAGTCCT 59.158 37.037 0.00 0.00 36.71 3.85
1243 1277 7.833285 AGTCCTTTCTGAATATCTAGTCCTC 57.167 40.000 0.00 0.00 0.00 3.71
1244 1278 7.591821 AGTCCTTTCTGAATATCTAGTCCTCT 58.408 38.462 0.00 0.00 0.00 3.69
1353 1388 1.133976 GCTGCATATTCCCTCTGGTGT 60.134 52.381 0.00 0.00 0.00 4.16
1356 1391 2.575735 TGCATATTCCCTCTGGTGTGAA 59.424 45.455 0.00 0.00 0.00 3.18
1362 1397 1.051812 CCCTCTGGTGTGAAGTGAGT 58.948 55.000 0.00 0.00 0.00 3.41
1509 1544 4.848757 CTTCACAAGCTTGTAAGGTGTTC 58.151 43.478 30.67 0.00 39.91 3.18
1518 1553 8.352942 CAAGCTTGTAAGGTGTTCTCTTTATTT 58.647 33.333 18.65 0.00 36.76 1.40
1574 1610 6.040729 CCTGTGGCCATTGATAAAATGTATCA 59.959 38.462 9.72 0.00 32.63 2.15
1597 1633 8.351495 TCACTATCACAATTTGCTTTGTTTTC 57.649 30.769 0.00 0.00 37.73 2.29
1600 1636 7.981225 ACTATCACAATTTGCTTTGTTTTCTGT 59.019 29.630 0.00 0.00 37.73 3.41
1612 1648 1.265635 GTTTTCTGTGTGGCGTGCATA 59.734 47.619 0.00 0.00 0.00 3.14
1639 1675 8.325787 TGTAGTGGATTTGTGGATGTTAGTATT 58.674 33.333 0.00 0.00 0.00 1.89
1644 1680 6.238759 GGATTTGTGGATGTTAGTATTCCAGC 60.239 42.308 0.00 0.00 40.11 4.85
1680 1716 4.803098 TTACTTCCTGAGTTGCTAGGAC 57.197 45.455 0.00 0.00 42.55 3.85
1772 1808 8.267183 TGTGAAGATGAACCATGTTATGAGTAT 58.733 33.333 0.00 0.00 27.44 2.12
1889 2234 6.783708 AAGGAGCTATATAGGCTGTATGTC 57.216 41.667 13.39 7.53 40.40 3.06
1974 2319 2.291043 CCCTCAACGGTGCCTACCT 61.291 63.158 0.00 0.00 45.22 3.08
1997 2344 1.533469 AAGTGCTCGTCGGCCTAAGT 61.533 55.000 0.00 0.00 0.00 2.24
2010 2357 1.488393 GCCTAAGTTCCTGCCTCTCAT 59.512 52.381 0.00 0.00 0.00 2.90
2145 2492 7.765819 TGATAAATATGATTAGCAGACCATCCG 59.234 37.037 0.00 0.00 28.71 4.18
2164 2511 6.351371 CCATCCGATTACTATCCTATGCAACT 60.351 42.308 0.00 0.00 0.00 3.16
2474 2823 4.345859 TGAACTCGTCACCTATTGGTTT 57.654 40.909 0.00 0.00 46.05 3.27
2498 2847 4.599041 TGCTTAGATGGTATTTTGGCACT 58.401 39.130 0.00 0.00 0.00 4.40
2619 2970 6.380846 TGTCAATTGGCTTAGGCAGAATAAAT 59.619 34.615 12.01 0.00 39.75 1.40
2627 2978 6.055588 GCTTAGGCAGAATAAATCAGGTACA 58.944 40.000 0.00 0.00 38.54 2.90
2674 3025 5.304101 CAGCCAATGAGGAGAAGACTACTAT 59.696 44.000 0.00 0.00 37.45 2.12
2817 3168 3.244249 ACTCCCTTCTCAGAAGAAAACGG 60.244 47.826 16.64 8.08 40.95 4.44
2970 3321 6.319658 CAGGCATATTTGATAACAAGGACACT 59.680 38.462 0.00 0.00 37.32 3.55
3017 3368 2.554893 TCCAGTTTGGTGGAAATAACGC 59.445 45.455 0.00 0.00 44.01 4.84
3045 3396 0.534203 CACCAACTAACACGCCTGGT 60.534 55.000 0.00 0.00 41.08 4.00
3259 3610 5.306394 TGGTTGGTTCACGTGTATATTTCA 58.694 37.500 16.51 5.67 0.00 2.69
3299 3650 5.045872 GCATTTATTTGAATGAGGCCTGTC 58.954 41.667 12.00 5.19 38.93 3.51
3313 3664 4.613437 AGGCCTGTCCACAATATTTGAAT 58.387 39.130 3.11 0.00 37.29 2.57
3332 3683 1.422531 TGGGAATGGCAAAGCTTTGT 58.577 45.000 33.47 18.47 40.24 2.83
3343 3694 5.011533 TGGCAAAGCTTTGTATTGTAATGGT 59.988 36.000 33.47 0.00 40.24 3.55
3344 3695 5.576774 GGCAAAGCTTTGTATTGTAATGGTC 59.423 40.000 33.47 15.96 40.24 4.02
3364 3715 9.632638 AATGGTCTATTGTCATTTTAGCACTAT 57.367 29.630 0.00 0.00 0.00 2.12
3380 3731 6.872628 AGCACTATGGTTGTATGATTGATG 57.127 37.500 0.00 0.00 0.00 3.07
3614 3967 7.118496 TGTTTCTGTTTACATTTGACCCAAT 57.882 32.000 0.00 0.00 0.00 3.16
3615 3968 8.239038 TGTTTCTGTTTACATTTGACCCAATA 57.761 30.769 0.00 0.00 0.00 1.90
3693 4053 2.028130 TGGTTTTGCCTAACACACAGG 58.972 47.619 1.19 0.00 38.35 4.00
3745 4105 7.475015 CAATTTGATCATTCTATTGACGGTGT 58.525 34.615 0.00 0.00 31.69 4.16
3910 4272 8.585018 CCAATTTGTTAAGTTATGGGAAAGTCT 58.415 33.333 0.00 0.00 0.00 3.24
3970 4332 1.480954 ACCCTCAGCTATACAACCGTG 59.519 52.381 0.00 0.00 0.00 4.94
4010 4393 3.737559 ATAAGTCAACCCTCAATGGCA 57.262 42.857 0.00 0.00 0.00 4.92
4099 4482 5.023533 TCTCCCACATCAGCTAATTGTAC 57.976 43.478 0.00 0.00 0.00 2.90
4100 4483 4.130118 CTCCCACATCAGCTAATTGTACC 58.870 47.826 0.00 0.00 0.00 3.34
4110 4493 4.937620 CAGCTAATTGTACCACATCACTGT 59.062 41.667 0.00 0.00 35.44 3.55
4124 4507 4.202503 ACATCACTGTATCATCCCCAATCC 60.203 45.833 0.00 0.00 32.49 3.01
4145 4795 1.674057 CCCACCCACTGTCTCTCAC 59.326 63.158 0.00 0.00 0.00 3.51
4164 4814 4.264253 TCACGGAATGCTCAAGATTTCAT 58.736 39.130 0.00 0.00 0.00 2.57
4191 4841 7.759465 ACAAGATGCAGTTTATCATTCAAGAG 58.241 34.615 0.00 0.00 0.00 2.85
4194 4844 5.300969 TGCAGTTTATCATTCAAGAGTGC 57.699 39.130 0.00 0.00 0.00 4.40
4196 4849 4.093408 GCAGTTTATCATTCAAGAGTGCGA 59.907 41.667 0.00 0.00 0.00 5.10
4197 4850 5.390885 GCAGTTTATCATTCAAGAGTGCGAA 60.391 40.000 0.00 0.00 0.00 4.70
4254 5176 3.003394 TGCCCCATTGTCACATTCTAG 57.997 47.619 0.00 0.00 0.00 2.43
4397 5319 2.614057 GTTGACTTGTGAGGTGTTGAGG 59.386 50.000 0.00 0.00 0.00 3.86
4424 5346 0.239347 GTTCGACATTGCAGCTGCTT 59.761 50.000 36.61 22.65 42.66 3.91
4528 5450 1.990060 GGCTGGAGGCAGGAGTGTA 60.990 63.158 0.00 0.00 44.01 2.90
4540 5462 1.432024 AGGAGTGTACTGTGGGGTAGT 59.568 52.381 0.00 0.00 0.00 2.73
4575 5497 3.150949 CTGAGTGTCCACCAGCCA 58.849 61.111 0.00 0.00 0.00 4.75
4591 5513 2.352805 CAGTGAGTTCCAGGCCCC 59.647 66.667 0.00 0.00 0.00 5.80
4622 5544 8.079211 TCAAGATGCTAACCTGACTATTTACT 57.921 34.615 0.00 0.00 0.00 2.24
4657 5579 8.941977 AGATATCATACTGACGTGTATTCTCTC 58.058 37.037 5.32 0.00 31.45 3.20
4789 5712 3.687102 CGCACGGACAGGGGTGTA 61.687 66.667 0.00 0.00 36.54 2.90
4846 5776 8.654094 AGGAACTGTTTTACTTAAGCTAGGTTA 58.346 33.333 10.31 10.31 37.18 2.85
4883 5813 0.033601 ATCACTGGACTCGCTCCTCT 60.034 55.000 1.21 0.00 40.26 3.69
4932 5862 1.320344 TATCACTGGACGCGCTCCTT 61.320 55.000 22.40 11.09 40.26 3.36
4945 5875 5.598769 ACGCGCTCCTTAATACTTAATTCT 58.401 37.500 5.73 0.00 0.00 2.40
5095 6025 3.441572 CCACTCTTCCCTGTTTAGCATTG 59.558 47.826 0.00 0.00 0.00 2.82
5142 6072 5.428783 ACTTATGTTCCCCAGTGCTACTATT 59.571 40.000 0.00 0.00 0.00 1.73
5206 6136 6.681777 ACTTCTTTTTCCATTCATGTAGCAC 58.318 36.000 0.00 0.00 0.00 4.40
5242 6172 2.698274 GGGTTGGAAAGACATTGGTGTT 59.302 45.455 0.00 0.00 39.09 3.32
5335 6265 8.834465 GTTATCAGAAATGATGTATGTGCTCTT 58.166 33.333 1.04 0.00 0.00 2.85
5355 6285 6.018343 GCTCTTCCTTTTCTGCTGACATATAC 60.018 42.308 0.00 0.00 0.00 1.47
5438 6368 6.418057 AGTTTTGCAAAGTATTCCATTCCA 57.582 33.333 12.41 0.00 0.00 3.53
5606 6537 1.899814 GAAATCGCCCTTTCCCCTTTT 59.100 47.619 0.00 0.00 0.00 2.27
5607 6538 1.266178 AATCGCCCTTTCCCCTTTTG 58.734 50.000 0.00 0.00 0.00 2.44
5608 6539 1.257750 ATCGCCCTTTCCCCTTTTGC 61.258 55.000 0.00 0.00 0.00 3.68
5950 6888 3.265791 GTCAGCGGTGATCAAAGAGAAT 58.734 45.455 21.66 0.00 34.36 2.40
5976 6914 1.765314 GCTGGACTGATCCTGTATGGT 59.235 52.381 0.00 0.00 46.43 3.55
6005 6944 8.531530 GCATTAATTATTGTCTTAAGGTTTGCG 58.468 33.333 1.85 0.00 0.00 4.85
6030 6969 6.767524 TTGGCAATAGTGGTAATGTTTAGG 57.232 37.500 0.00 0.00 0.00 2.69
6031 6970 5.197451 TGGCAATAGTGGTAATGTTTAGGG 58.803 41.667 0.00 0.00 0.00 3.53
6085 7024 2.328099 GCCCTGCGGAGTTTCTGTG 61.328 63.158 2.36 0.00 0.00 3.66
6111 7050 2.632996 AGCTACACACCTAAGAAGCACA 59.367 45.455 0.00 0.00 32.42 4.57
6131 7076 4.211794 CACACCTGGATGAATTTTTGTTGC 59.788 41.667 0.00 0.00 0.00 4.17
6138 7083 6.919721 TGGATGAATTTTTGTTGCCTAGTAC 58.080 36.000 0.00 0.00 0.00 2.73
6159 7104 2.154389 CGTTTAGCTGGTCGTGTTGTAC 59.846 50.000 0.00 0.00 0.00 2.90
6299 7247 1.956477 ACCATTTCGAGGCCATTATGC 59.044 47.619 5.01 0.00 0.00 3.14
6301 7249 1.603802 CATTTCGAGGCCATTATGCGT 59.396 47.619 5.01 0.00 0.00 5.24
6333 7281 5.733620 ATGGAATTGTCTGTTGCTTGAAT 57.266 34.783 0.00 0.00 0.00 2.57
6351 7299 6.696148 GCTTGAATCTTGCAATCTGGATTTAG 59.304 38.462 11.60 12.26 0.00 1.85
6352 7300 6.704289 TGAATCTTGCAATCTGGATTTAGG 57.296 37.500 11.60 0.00 0.00 2.69
6353 7301 5.595542 TGAATCTTGCAATCTGGATTTAGGG 59.404 40.000 11.60 0.00 0.00 3.53
6354 7302 4.860802 TCTTGCAATCTGGATTTAGGGA 57.139 40.909 0.00 0.00 0.00 4.20
6355 7303 4.785301 TCTTGCAATCTGGATTTAGGGAG 58.215 43.478 0.00 0.00 0.00 4.30
6356 7304 4.474651 TCTTGCAATCTGGATTTAGGGAGA 59.525 41.667 0.00 0.00 0.00 3.71
6357 7305 4.860802 TGCAATCTGGATTTAGGGAGAA 57.139 40.909 0.00 0.00 0.00 2.87
6358 7306 5.393068 TGCAATCTGGATTTAGGGAGAAT 57.607 39.130 0.00 0.00 0.00 2.40
6359 7307 6.514012 TGCAATCTGGATTTAGGGAGAATA 57.486 37.500 0.00 0.00 0.00 1.75
6360 7308 7.095183 TGCAATCTGGATTTAGGGAGAATAT 57.905 36.000 0.00 0.00 0.00 1.28
6361 7309 7.170965 TGCAATCTGGATTTAGGGAGAATATC 58.829 38.462 0.00 0.00 0.00 1.63
6362 7310 7.170965 GCAATCTGGATTTAGGGAGAATATCA 58.829 38.462 0.00 0.00 0.00 2.15
6363 7311 7.833183 GCAATCTGGATTTAGGGAGAATATCAT 59.167 37.037 0.00 0.00 0.00 2.45
6367 7315 8.996655 TCTGGATTTAGGGAGAATATCATATGG 58.003 37.037 2.13 0.00 0.00 2.74
6368 7316 8.931904 TGGATTTAGGGAGAATATCATATGGA 57.068 34.615 2.13 0.00 0.00 3.41
6369 7317 9.350306 TGGATTTAGGGAGAATATCATATGGAA 57.650 33.333 2.13 0.00 0.00 3.53
6373 7321 9.502091 TTTAGGGAGAATATCATATGGAAAACG 57.498 33.333 2.13 0.00 0.00 3.60
6374 7322 6.476378 AGGGAGAATATCATATGGAAAACGG 58.524 40.000 2.13 0.00 0.00 4.44
6375 7323 6.044404 AGGGAGAATATCATATGGAAAACGGT 59.956 38.462 2.13 0.00 0.00 4.83
6376 7324 6.149474 GGGAGAATATCATATGGAAAACGGTG 59.851 42.308 2.13 0.00 0.00 4.94
6377 7325 6.149474 GGAGAATATCATATGGAAAACGGTGG 59.851 42.308 2.13 0.00 0.00 4.61
6378 7326 6.837312 AGAATATCATATGGAAAACGGTGGA 58.163 36.000 2.13 0.00 0.00 4.02
6379 7327 6.936900 AGAATATCATATGGAAAACGGTGGAG 59.063 38.462 2.13 0.00 0.00 3.86
6382 7330 3.517901 TCATATGGAAAACGGTGGAGAGT 59.482 43.478 2.13 0.00 0.00 3.24
6398 7346 3.181475 GGAGAGTGGTGAATTATCTCGCA 60.181 47.826 0.00 0.00 37.80 5.10
6426 7374 5.391950 GCGGAACAAGAGAGCAATTTCATTA 60.392 40.000 0.00 0.00 0.00 1.90
6429 7377 7.247019 GGAACAAGAGAGCAATTTCATTACTC 58.753 38.462 0.00 0.00 33.72 2.59
6430 7378 7.094634 GGAACAAGAGAGCAATTTCATTACTCA 60.095 37.037 0.00 0.00 35.55 3.41
6437 7386 6.336842 AGCAATTTCATTACTCAGTTTGCT 57.663 33.333 5.03 5.03 42.53 3.91
6465 7414 6.737254 TGTTTTTCATTAGCAGTACCTAGC 57.263 37.500 0.00 0.00 0.00 3.42
6467 7416 6.594159 TGTTTTTCATTAGCAGTACCTAGCTC 59.406 38.462 8.17 0.00 42.05 4.09
6468 7417 4.569761 TTCATTAGCAGTACCTAGCTCG 57.430 45.455 8.17 0.00 42.05 5.03
6477 7426 2.509931 TACCTAGCTCGGGTGGCTGT 62.510 60.000 18.18 0.00 40.52 4.40
6552 7503 3.366985 GGTTTGCCCTAGGTCAAAATTCG 60.367 47.826 19.08 0.00 33.31 3.34
6553 7504 2.871096 TGCCCTAGGTCAAAATTCGT 57.129 45.000 8.29 0.00 0.00 3.85
6557 7508 3.064958 GCCCTAGGTCAAAATTCGTAAGC 59.935 47.826 8.29 0.00 37.18 3.09
6576 7527 6.092944 CGTAAGCCTGACCATGTACATAAAAA 59.907 38.462 8.32 0.00 0.00 1.94
6670 7621 5.508200 TTTGGTGTTGTAGATGTTTGGTC 57.492 39.130 0.00 0.00 0.00 4.02
6671 7622 4.157849 TGGTGTTGTAGATGTTTGGTCA 57.842 40.909 0.00 0.00 0.00 4.02
6673 7624 4.950475 TGGTGTTGTAGATGTTTGGTCAAA 59.050 37.500 0.00 0.00 0.00 2.69
6712 7685 6.688813 CACTTAACAAACAGAGAGCTTCAAAC 59.311 38.462 0.00 0.00 0.00 2.93
6714 7687 5.841957 AACAAACAGAGAGCTTCAAACAT 57.158 34.783 0.00 0.00 0.00 2.71
6726 7699 3.601360 GCTTCAAACATTTTGAAACGGCG 60.601 43.478 4.80 4.80 37.89 6.46
6738 7711 1.457823 AAACGGCGGAGGGTTTTTCC 61.458 55.000 13.24 0.00 32.77 3.13
6739 7712 2.281900 CGGCGGAGGGTTTTTCCA 60.282 61.111 0.00 0.00 38.11 3.53
6740 7713 2.332654 CGGCGGAGGGTTTTTCCAG 61.333 63.158 0.00 0.00 38.11 3.86
6741 7714 1.977009 GGCGGAGGGTTTTTCCAGG 60.977 63.158 0.00 0.00 38.11 4.45
6742 7715 1.977009 GCGGAGGGTTTTTCCAGGG 60.977 63.158 0.00 0.00 38.11 4.45
6743 7716 1.765074 CGGAGGGTTTTTCCAGGGA 59.235 57.895 0.00 0.00 38.11 4.20
6744 7717 0.331616 CGGAGGGTTTTTCCAGGGAT 59.668 55.000 0.00 0.00 38.11 3.85
6745 7718 1.682087 CGGAGGGTTTTTCCAGGGATC 60.682 57.143 0.00 0.00 38.11 3.36
6746 7719 1.641192 GGAGGGTTTTTCCAGGGATCT 59.359 52.381 0.00 0.00 38.11 2.75
6747 7720 2.043115 GGAGGGTTTTTCCAGGGATCTT 59.957 50.000 0.00 0.00 38.11 2.40
6748 7721 3.357203 GAGGGTTTTTCCAGGGATCTTC 58.643 50.000 0.00 0.00 38.11 2.87
6749 7722 2.043115 AGGGTTTTTCCAGGGATCTTCC 59.957 50.000 0.00 0.00 38.11 3.46
6763 7736 5.444663 GGATCTTCCCAGATATTTTGCAC 57.555 43.478 0.00 0.00 40.14 4.57
6764 7737 4.889409 GGATCTTCCCAGATATTTTGCACA 59.111 41.667 0.00 0.00 40.14 4.57
6765 7738 5.009410 GGATCTTCCCAGATATTTTGCACAG 59.991 44.000 0.00 0.00 40.14 3.66
6766 7739 3.696051 TCTTCCCAGATATTTTGCACAGC 59.304 43.478 0.00 0.00 0.00 4.40
6767 7740 3.084536 TCCCAGATATTTTGCACAGCA 57.915 42.857 0.00 0.00 36.47 4.41
6768 7741 2.754552 TCCCAGATATTTTGCACAGCAC 59.245 45.455 0.00 0.00 38.71 4.40
6769 7742 2.478370 CCCAGATATTTTGCACAGCACG 60.478 50.000 0.00 0.00 38.71 5.34
6770 7743 2.419673 CCAGATATTTTGCACAGCACGA 59.580 45.455 0.00 0.00 38.71 4.35
6771 7744 3.065786 CCAGATATTTTGCACAGCACGAT 59.934 43.478 0.00 0.00 38.71 3.73
6772 7745 4.273235 CCAGATATTTTGCACAGCACGATA 59.727 41.667 0.00 0.00 38.71 2.92
6773 7746 5.049198 CCAGATATTTTGCACAGCACGATAT 60.049 40.000 0.00 0.00 38.71 1.63
6774 7747 6.432936 CAGATATTTTGCACAGCACGATATT 58.567 36.000 0.00 0.00 38.71 1.28
6775 7748 6.576313 CAGATATTTTGCACAGCACGATATTC 59.424 38.462 0.00 0.00 38.71 1.75
6776 7749 4.970662 ATTTTGCACAGCACGATATTCT 57.029 36.364 0.00 0.00 38.71 2.40
6777 7750 4.340894 TTTTGCACAGCACGATATTCTC 57.659 40.909 0.00 0.00 38.71 2.87
6778 7751 2.671130 TGCACAGCACGATATTCTCA 57.329 45.000 0.00 0.00 31.71 3.27
6779 7752 3.183793 TGCACAGCACGATATTCTCAT 57.816 42.857 0.00 0.00 31.71 2.90
6780 7753 3.534554 TGCACAGCACGATATTCTCATT 58.465 40.909 0.00 0.00 31.71 2.57
6781 7754 3.557185 TGCACAGCACGATATTCTCATTC 59.443 43.478 0.00 0.00 31.71 2.67
6782 7755 3.806521 GCACAGCACGATATTCTCATTCT 59.193 43.478 0.00 0.00 0.00 2.40
6783 7756 4.272018 GCACAGCACGATATTCTCATTCTT 59.728 41.667 0.00 0.00 0.00 2.52
6784 7757 5.557893 GCACAGCACGATATTCTCATTCTTC 60.558 44.000 0.00 0.00 0.00 2.87
6785 7758 5.752472 CACAGCACGATATTCTCATTCTTCT 59.248 40.000 0.00 0.00 0.00 2.85
6786 7759 6.257411 CACAGCACGATATTCTCATTCTTCTT 59.743 38.462 0.00 0.00 0.00 2.52
6787 7760 6.820656 ACAGCACGATATTCTCATTCTTCTTT 59.179 34.615 0.00 0.00 0.00 2.52
6788 7761 7.010923 ACAGCACGATATTCTCATTCTTCTTTC 59.989 37.037 0.00 0.00 0.00 2.62
6789 7762 7.010830 CAGCACGATATTCTCATTCTTCTTTCA 59.989 37.037 0.00 0.00 0.00 2.69
6790 7763 7.224362 AGCACGATATTCTCATTCTTCTTTCAG 59.776 37.037 0.00 0.00 0.00 3.02
6791 7764 7.223582 GCACGATATTCTCATTCTTCTTTCAGA 59.776 37.037 0.00 0.00 0.00 3.27
6792 7765 9.091784 CACGATATTCTCATTCTTCTTTCAGAA 57.908 33.333 0.00 0.00 37.20 3.02
6793 7766 9.092876 ACGATATTCTCATTCTTCTTTCAGAAC 57.907 33.333 0.00 0.00 35.57 3.01
6794 7767 9.311916 CGATATTCTCATTCTTCTTTCAGAACT 57.688 33.333 0.00 0.00 35.57 3.01
6797 7770 6.551385 TCTCATTCTTCTTTCAGAACTTGC 57.449 37.500 0.00 0.00 35.57 4.01
6798 7771 6.057533 TCTCATTCTTCTTTCAGAACTTGCA 58.942 36.000 0.00 0.00 35.57 4.08
6799 7772 6.204301 TCTCATTCTTCTTTCAGAACTTGCAG 59.796 38.462 0.00 0.00 35.57 4.41
6800 7773 6.057533 TCATTCTTCTTTCAGAACTTGCAGA 58.942 36.000 0.00 0.00 35.57 4.26
6801 7774 6.713903 TCATTCTTCTTTCAGAACTTGCAGAT 59.286 34.615 0.00 0.00 35.57 2.90
6802 7775 6.949352 TTCTTCTTTCAGAACTTGCAGATT 57.051 33.333 0.00 0.00 29.89 2.40
6803 7776 6.551385 TCTTCTTTCAGAACTTGCAGATTC 57.449 37.500 4.29 4.29 29.89 2.52
6804 7777 6.057533 TCTTCTTTCAGAACTTGCAGATTCA 58.942 36.000 12.89 0.00 29.89 2.57
6805 7778 5.679734 TCTTTCAGAACTTGCAGATTCAC 57.320 39.130 12.89 0.00 0.00 3.18
6806 7779 5.125356 TCTTTCAGAACTTGCAGATTCACA 58.875 37.500 12.89 0.00 0.00 3.58
6807 7780 5.766670 TCTTTCAGAACTTGCAGATTCACAT 59.233 36.000 12.89 0.00 0.00 3.21
6808 7781 6.263842 TCTTTCAGAACTTGCAGATTCACATT 59.736 34.615 12.89 0.00 0.00 2.71
6809 7782 5.618056 TCAGAACTTGCAGATTCACATTC 57.382 39.130 12.89 0.00 0.00 2.67
6810 7783 4.456911 TCAGAACTTGCAGATTCACATTCC 59.543 41.667 12.89 0.00 0.00 3.01
6811 7784 4.458295 CAGAACTTGCAGATTCACATTCCT 59.542 41.667 12.89 0.00 0.00 3.36
6812 7785 5.048224 CAGAACTTGCAGATTCACATTCCTT 60.048 40.000 12.89 0.00 0.00 3.36
6813 7786 4.778534 ACTTGCAGATTCACATTCCTTG 57.221 40.909 0.00 0.00 0.00 3.61
6814 7787 4.147321 ACTTGCAGATTCACATTCCTTGT 58.853 39.130 0.00 0.00 39.91 3.16
6815 7788 5.316167 ACTTGCAGATTCACATTCCTTGTA 58.684 37.500 0.00 0.00 36.57 2.41
6816 7789 5.413833 ACTTGCAGATTCACATTCCTTGTAG 59.586 40.000 0.00 0.00 36.57 2.74
6817 7790 4.910195 TGCAGATTCACATTCCTTGTAGT 58.090 39.130 0.00 0.00 36.57 2.73
6818 7791 4.696877 TGCAGATTCACATTCCTTGTAGTG 59.303 41.667 0.00 0.00 36.57 2.74
6819 7792 4.437930 GCAGATTCACATTCCTTGTAGTGC 60.438 45.833 0.00 0.00 36.57 4.40
6820 7793 4.696877 CAGATTCACATTCCTTGTAGTGCA 59.303 41.667 0.00 0.00 36.57 4.57
6821 7794 5.181811 CAGATTCACATTCCTTGTAGTGCAA 59.818 40.000 0.00 0.00 36.57 4.08
6822 7795 5.769662 AGATTCACATTCCTTGTAGTGCAAA 59.230 36.000 0.00 0.00 36.57 3.68
6823 7796 6.435277 AGATTCACATTCCTTGTAGTGCAAAT 59.565 34.615 0.00 0.00 36.57 2.32
6824 7797 6.403866 TTCACATTCCTTGTAGTGCAAATT 57.596 33.333 0.00 0.00 36.57 1.82
6825 7798 7.517614 TTCACATTCCTTGTAGTGCAAATTA 57.482 32.000 0.00 0.00 36.57 1.40
6826 7799 7.144722 TCACATTCCTTGTAGTGCAAATTAG 57.855 36.000 0.00 0.00 36.57 1.73
6827 7800 5.801947 CACATTCCTTGTAGTGCAAATTAGC 59.198 40.000 0.00 0.00 36.57 3.09
6828 7801 5.711976 ACATTCCTTGTAGTGCAAATTAGCT 59.288 36.000 0.00 0.00 36.57 3.32
6838 7811 8.525316 TGTAGTGCAAATTAGCTACAGTTACTA 58.475 33.333 8.16 0.00 38.88 1.82
6844 7817 9.413048 GCAAATTAGCTACAGTTACTATAGGAG 57.587 37.037 4.43 0.00 0.00 3.69
6850 7823 6.993902 AGCTACAGTTACTATAGGAGTCTCAC 59.006 42.308 4.43 0.00 39.81 3.51
6896 7869 1.334288 GCGCCAATTCAAACGTTCCG 61.334 55.000 0.00 0.00 0.00 4.30
6908 7881 2.867472 GTTCCGTTCATGCACCGG 59.133 61.111 0.00 0.00 43.03 5.28
6910 7883 2.264480 TCCGTTCATGCACCGGAG 59.736 61.111 9.46 0.00 45.20 4.63
6911 7884 2.047274 CCGTTCATGCACCGGAGT 60.047 61.111 9.46 0.00 44.41 3.85
6912 7885 2.779951 TCCGTTCATGCACCGGAGTG 62.780 60.000 9.46 0.00 45.20 3.51
6913 7886 2.390599 CGTTCATGCACCGGAGTGG 61.391 63.158 9.46 0.00 44.69 4.00
6914 7887 2.359850 TTCATGCACCGGAGTGGC 60.360 61.111 9.46 6.85 44.69 5.01
6915 7888 2.894257 TTCATGCACCGGAGTGGCT 61.894 57.895 9.46 0.00 44.69 4.75
6916 7889 2.360350 CATGCACCGGAGTGGCTT 60.360 61.111 9.46 1.37 44.69 4.35
6917 7890 2.360350 ATGCACCGGAGTGGCTTG 60.360 61.111 9.46 0.00 44.69 4.01
6918 7891 3.196207 ATGCACCGGAGTGGCTTGT 62.196 57.895 9.46 0.00 44.69 3.16
6919 7892 3.357079 GCACCGGAGTGGCTTGTG 61.357 66.667 9.46 0.00 44.69 3.33
6920 7893 3.357079 CACCGGAGTGGCTTGTGC 61.357 66.667 9.46 0.00 43.94 4.57
6930 7903 2.362120 GCTTGTGCCAGGCTCCAT 60.362 61.111 14.15 0.00 33.60 3.41
6931 7904 2.707849 GCTTGTGCCAGGCTCCATG 61.708 63.158 14.15 12.23 33.60 3.66
6932 7905 2.677524 TTGTGCCAGGCTCCATGC 60.678 61.111 14.15 0.00 41.94 4.06
6933 7906 3.510559 TTGTGCCAGGCTCCATGCA 62.511 57.895 14.15 0.00 45.15 3.96
6934 7907 3.138798 GTGCCAGGCTCCATGCAG 61.139 66.667 14.15 0.00 45.15 4.41
6935 7908 3.332385 TGCCAGGCTCCATGCAGA 61.332 61.111 14.15 0.00 45.15 4.26
6936 7909 2.516460 GCCAGGCTCCATGCAGAG 60.516 66.667 3.29 0.00 45.15 3.35
6937 7910 2.192443 CCAGGCTCCATGCAGAGG 59.808 66.667 5.23 3.51 45.15 3.69
6941 7914 4.119363 GCTCCATGCAGAGGCCCA 62.119 66.667 0.00 0.00 42.31 5.36
6942 7915 2.679092 CTCCATGCAGAGGCCCAA 59.321 61.111 0.00 0.00 40.13 4.12
6943 7916 1.751927 CTCCATGCAGAGGCCCAAC 60.752 63.158 0.00 0.00 40.13 3.77
6944 7917 3.136123 CCATGCAGAGGCCCAACG 61.136 66.667 0.00 0.00 40.13 4.10
6945 7918 3.818787 CATGCAGAGGCCCAACGC 61.819 66.667 0.00 0.00 40.13 4.84
6946 7919 4.349503 ATGCAGAGGCCCAACGCA 62.350 61.111 0.00 3.76 40.31 5.24
6947 7920 3.650298 ATGCAGAGGCCCAACGCAT 62.650 57.895 12.39 12.39 40.31 4.73
6948 7921 3.818787 GCAGAGGCCCAACGCATG 61.819 66.667 0.00 0.00 40.31 4.06
6949 7922 2.046023 CAGAGGCCCAACGCATGA 60.046 61.111 0.00 0.00 40.31 3.07
6950 7923 1.675310 CAGAGGCCCAACGCATGAA 60.675 57.895 0.00 0.00 40.31 2.57
6951 7924 1.675641 AGAGGCCCAACGCATGAAC 60.676 57.895 0.00 0.00 40.31 3.18
6952 7925 1.971167 GAGGCCCAACGCATGAACA 60.971 57.895 0.00 0.00 40.31 3.18
6953 7926 1.523154 GAGGCCCAACGCATGAACAA 61.523 55.000 0.00 0.00 40.31 2.83
6954 7927 1.112315 AGGCCCAACGCATGAACAAA 61.112 50.000 0.00 0.00 40.31 2.83
6955 7928 0.667184 GGCCCAACGCATGAACAAAG 60.667 55.000 0.00 0.00 40.31 2.77
6956 7929 0.031994 GCCCAACGCATGAACAAAGT 59.968 50.000 0.00 0.00 37.47 2.66
6957 7930 1.268352 GCCCAACGCATGAACAAAGTA 59.732 47.619 0.00 0.00 37.47 2.24
6958 7931 2.287909 GCCCAACGCATGAACAAAGTAA 60.288 45.455 0.00 0.00 37.47 2.24
6959 7932 3.797184 GCCCAACGCATGAACAAAGTAAA 60.797 43.478 0.00 0.00 37.47 2.01
6960 7933 4.555262 CCCAACGCATGAACAAAGTAAAT 58.445 39.130 0.00 0.00 0.00 1.40
6961 7934 4.385447 CCCAACGCATGAACAAAGTAAATG 59.615 41.667 0.00 0.00 0.00 2.32
6962 7935 4.143347 CCAACGCATGAACAAAGTAAATGC 60.143 41.667 0.00 0.00 40.14 3.56
6963 7936 4.235939 ACGCATGAACAAAGTAAATGCA 57.764 36.364 0.00 0.00 42.95 3.96
6964 7937 4.808558 ACGCATGAACAAAGTAAATGCAT 58.191 34.783 0.00 0.00 42.95 3.96
6965 7938 5.948588 ACGCATGAACAAAGTAAATGCATA 58.051 33.333 0.00 0.00 42.95 3.14
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 0.966920 TTCAGTGGGAGGAGACGTTC 59.033 55.000 0.00 0.00 0.00 3.95
13 14 1.344763 CTTTCAGTGGGAGGAGACGTT 59.655 52.381 0.00 0.00 0.00 3.99
14 15 0.969894 CTTTCAGTGGGAGGAGACGT 59.030 55.000 0.00 0.00 0.00 4.34
15 16 0.390472 GCTTTCAGTGGGAGGAGACG 60.390 60.000 0.00 0.00 0.00 4.18
16 17 0.390472 CGCTTTCAGTGGGAGGAGAC 60.390 60.000 0.00 0.00 0.00 3.36
17 18 1.975327 CGCTTTCAGTGGGAGGAGA 59.025 57.895 0.00 0.00 0.00 3.71
18 19 1.743252 GCGCTTTCAGTGGGAGGAG 60.743 63.158 0.00 0.00 0.00 3.69
19 20 1.841302 ATGCGCTTTCAGTGGGAGGA 61.841 55.000 9.73 0.00 0.00 3.71
20 21 1.372087 GATGCGCTTTCAGTGGGAGG 61.372 60.000 9.73 0.00 0.00 4.30
21 22 1.699656 CGATGCGCTTTCAGTGGGAG 61.700 60.000 9.73 0.00 0.00 4.30
22 23 1.741401 CGATGCGCTTTCAGTGGGA 60.741 57.895 9.73 0.00 0.00 4.37
23 24 2.787249 CGATGCGCTTTCAGTGGG 59.213 61.111 9.73 0.00 0.00 4.61
34 35 2.588877 AGGATTTCCGGCGATGCG 60.589 61.111 9.30 0.00 42.08 4.73
35 36 1.095228 TTCAGGATTTCCGGCGATGC 61.095 55.000 9.30 0.00 42.08 3.91
36 37 1.378531 TTTCAGGATTTCCGGCGATG 58.621 50.000 9.30 0.00 42.08 3.84
37 38 2.348411 ATTTCAGGATTTCCGGCGAT 57.652 45.000 9.30 0.00 42.08 4.58
38 39 2.992124 TATTTCAGGATTTCCGGCGA 57.008 45.000 9.30 0.00 42.08 5.54
39 40 4.537015 GATTTATTTCAGGATTTCCGGCG 58.463 43.478 0.00 0.00 42.08 6.46
40 41 4.340950 TGGATTTATTTCAGGATTTCCGGC 59.659 41.667 0.00 0.00 42.08 6.13
41 42 6.321181 TCTTGGATTTATTTCAGGATTTCCGG 59.679 38.462 0.00 0.00 42.08 5.14
42 43 7.333528 TCTTGGATTTATTTCAGGATTTCCG 57.666 36.000 0.00 0.00 42.08 4.30
48 49 8.352201 CGCATTATTCTTGGATTTATTTCAGGA 58.648 33.333 0.00 0.00 0.00 3.86
49 50 8.352201 TCGCATTATTCTTGGATTTATTTCAGG 58.648 33.333 0.00 0.00 0.00 3.86
50 51 9.390795 CTCGCATTATTCTTGGATTTATTTCAG 57.609 33.333 0.00 0.00 0.00 3.02
51 52 7.862372 GCTCGCATTATTCTTGGATTTATTTCA 59.138 33.333 0.00 0.00 0.00 2.69
52 53 7.862372 TGCTCGCATTATTCTTGGATTTATTTC 59.138 33.333 0.00 0.00 0.00 2.17
53 54 7.649306 GTGCTCGCATTATTCTTGGATTTATTT 59.351 33.333 0.00 0.00 0.00 1.40
54 55 7.141363 GTGCTCGCATTATTCTTGGATTTATT 58.859 34.615 0.00 0.00 0.00 1.40
55 56 6.294176 GGTGCTCGCATTATTCTTGGATTTAT 60.294 38.462 0.00 0.00 0.00 1.40
56 57 5.008613 GGTGCTCGCATTATTCTTGGATTTA 59.991 40.000 0.00 0.00 0.00 1.40
57 58 4.202050 GGTGCTCGCATTATTCTTGGATTT 60.202 41.667 0.00 0.00 0.00 2.17
58 59 3.316308 GGTGCTCGCATTATTCTTGGATT 59.684 43.478 0.00 0.00 0.00 3.01
59 60 2.880890 GGTGCTCGCATTATTCTTGGAT 59.119 45.455 0.00 0.00 0.00 3.41
60 61 2.288666 GGTGCTCGCATTATTCTTGGA 58.711 47.619 0.00 0.00 0.00 3.53
61 62 2.016318 TGGTGCTCGCATTATTCTTGG 58.984 47.619 0.00 0.00 0.00 3.61
62 63 2.032550 CCTGGTGCTCGCATTATTCTTG 59.967 50.000 0.00 0.00 0.00 3.02
63 64 2.092968 TCCTGGTGCTCGCATTATTCTT 60.093 45.455 0.00 0.00 0.00 2.52
64 65 1.486310 TCCTGGTGCTCGCATTATTCT 59.514 47.619 0.00 0.00 0.00 2.40
65 66 1.953559 TCCTGGTGCTCGCATTATTC 58.046 50.000 0.00 0.00 0.00 1.75
66 67 2.645838 ATCCTGGTGCTCGCATTATT 57.354 45.000 0.00 0.00 0.00 1.40
67 68 2.620115 CAAATCCTGGTGCTCGCATTAT 59.380 45.455 0.00 0.00 0.00 1.28
68 69 2.016318 CAAATCCTGGTGCTCGCATTA 58.984 47.619 0.00 0.00 0.00 1.90
69 70 0.813184 CAAATCCTGGTGCTCGCATT 59.187 50.000 0.00 0.00 0.00 3.56
70 71 0.035152 TCAAATCCTGGTGCTCGCAT 60.035 50.000 0.00 0.00 0.00 4.73
71 72 0.250684 TTCAAATCCTGGTGCTCGCA 60.251 50.000 0.00 0.00 0.00 5.10
72 73 0.169009 GTTCAAATCCTGGTGCTCGC 59.831 55.000 0.00 0.00 0.00 5.03
73 74 0.804989 GGTTCAAATCCTGGTGCTCG 59.195 55.000 0.00 0.00 0.00 5.03
74 75 1.177401 GGGTTCAAATCCTGGTGCTC 58.823 55.000 0.00 0.00 0.00 4.26
75 76 0.779997 AGGGTTCAAATCCTGGTGCT 59.220 50.000 0.00 0.00 38.36 4.40
76 77 3.363787 AGGGTTCAAATCCTGGTGC 57.636 52.632 0.00 0.00 38.36 5.01
92 93 0.478507 GATATCCCCAACCCACCAGG 59.521 60.000 0.00 0.00 43.78 4.45
93 94 1.133792 GTGATATCCCCAACCCACCAG 60.134 57.143 0.00 0.00 0.00 4.00
94 95 0.923358 GTGATATCCCCAACCCACCA 59.077 55.000 0.00 0.00 0.00 4.17
95 96 1.133792 CAGTGATATCCCCAACCCACC 60.134 57.143 0.00 0.00 0.00 4.61
96 97 1.564348 ACAGTGATATCCCCAACCCAC 59.436 52.381 0.00 0.00 0.00 4.61
97 98 1.843851 GACAGTGATATCCCCAACCCA 59.156 52.381 0.00 0.00 0.00 4.51
98 99 1.143073 GGACAGTGATATCCCCAACCC 59.857 57.143 0.00 0.00 0.00 4.11
99 100 1.843851 TGGACAGTGATATCCCCAACC 59.156 52.381 0.00 0.00 0.00 3.77
100 101 2.421529 GGTGGACAGTGATATCCCCAAC 60.422 54.545 0.00 0.00 0.00 3.77
101 102 1.843851 GGTGGACAGTGATATCCCCAA 59.156 52.381 0.00 0.00 0.00 4.12
102 103 1.009552 AGGTGGACAGTGATATCCCCA 59.990 52.381 0.00 0.00 0.00 4.96
103 104 1.807814 AGGTGGACAGTGATATCCCC 58.192 55.000 0.00 0.00 0.00 4.81
104 105 3.071167 GGTTAGGTGGACAGTGATATCCC 59.929 52.174 0.00 0.00 0.00 3.85
105 106 3.709653 TGGTTAGGTGGACAGTGATATCC 59.290 47.826 0.00 0.00 0.00 2.59
106 107 5.104900 AGTTGGTTAGGTGGACAGTGATATC 60.105 44.000 0.00 0.00 0.00 1.63
107 108 4.783227 AGTTGGTTAGGTGGACAGTGATAT 59.217 41.667 0.00 0.00 0.00 1.63
108 109 4.164981 AGTTGGTTAGGTGGACAGTGATA 58.835 43.478 0.00 0.00 0.00 2.15
109 110 2.979678 AGTTGGTTAGGTGGACAGTGAT 59.020 45.455 0.00 0.00 0.00 3.06
110 111 2.367567 GAGTTGGTTAGGTGGACAGTGA 59.632 50.000 0.00 0.00 0.00 3.41
111 112 2.104111 TGAGTTGGTTAGGTGGACAGTG 59.896 50.000 0.00 0.00 0.00 3.66
112 113 2.404559 TGAGTTGGTTAGGTGGACAGT 58.595 47.619 0.00 0.00 0.00 3.55
113 114 3.139077 GTTGAGTTGGTTAGGTGGACAG 58.861 50.000 0.00 0.00 0.00 3.51
114 115 2.158726 GGTTGAGTTGGTTAGGTGGACA 60.159 50.000 0.00 0.00 0.00 4.02
115 116 2.158726 TGGTTGAGTTGGTTAGGTGGAC 60.159 50.000 0.00 0.00 0.00 4.02
116 117 2.128535 TGGTTGAGTTGGTTAGGTGGA 58.871 47.619 0.00 0.00 0.00 4.02
117 118 2.227194 GTGGTTGAGTTGGTTAGGTGG 58.773 52.381 0.00 0.00 0.00 4.61
118 119 2.878406 CTGTGGTTGAGTTGGTTAGGTG 59.122 50.000 0.00 0.00 0.00 4.00
119 120 2.158667 CCTGTGGTTGAGTTGGTTAGGT 60.159 50.000 0.00 0.00 0.00 3.08
120 121 2.158667 ACCTGTGGTTGAGTTGGTTAGG 60.159 50.000 0.00 0.00 27.29 2.69
121 122 3.208747 ACCTGTGGTTGAGTTGGTTAG 57.791 47.619 0.00 0.00 27.29 2.34
122 123 3.655615 AACCTGTGGTTGAGTTGGTTA 57.344 42.857 0.71 0.00 45.07 2.85
123 124 2.525105 AACCTGTGGTTGAGTTGGTT 57.475 45.000 0.71 0.00 45.07 3.67
133 134 3.412722 TTGCGAATCAACCTGTGGT 57.587 47.368 0.00 0.00 37.65 4.16
140 141 6.359048 ACAGACATGTCGTTGCGAATCAAC 62.359 45.833 19.85 0.00 41.09 3.18
141 142 2.157474 CAGACATGTCGTTGCGAATCAA 59.843 45.455 19.85 0.00 37.72 2.57
142 143 1.726248 CAGACATGTCGTTGCGAATCA 59.274 47.619 19.85 0.00 37.72 2.57
143 144 1.726791 ACAGACATGTCGTTGCGAATC 59.273 47.619 19.85 0.00 37.72 2.52
144 145 1.795768 ACAGACATGTCGTTGCGAAT 58.204 45.000 19.85 0.00 37.72 3.34
145 146 1.577468 AACAGACATGTCGTTGCGAA 58.423 45.000 24.98 0.00 39.29 4.70
146 147 2.425578 TAACAGACATGTCGTTGCGA 57.574 45.000 29.57 16.98 39.29 5.10
147 148 2.923655 AGATAACAGACATGTCGTTGCG 59.076 45.455 29.57 17.63 39.29 4.85
148 149 5.498700 CGTTAGATAACAGACATGTCGTTGC 60.499 44.000 29.57 23.77 39.29 4.17
149 150 5.798434 TCGTTAGATAACAGACATGTCGTTG 59.202 40.000 29.57 22.41 39.29 4.10
150 151 5.946298 TCGTTAGATAACAGACATGTCGTT 58.054 37.500 27.03 27.03 39.29 3.85
151 152 5.556355 TCGTTAGATAACAGACATGTCGT 57.444 39.130 19.85 16.98 39.29 4.34
152 153 6.864560 TTTCGTTAGATAACAGACATGTCG 57.135 37.500 19.85 16.37 39.29 4.35
153 154 9.088512 AGAATTTCGTTAGATAACAGACATGTC 57.911 33.333 18.47 18.47 39.29 3.06
154 155 8.873830 CAGAATTTCGTTAGATAACAGACATGT 58.126 33.333 0.00 0.00 43.15 3.21
155 156 8.873830 ACAGAATTTCGTTAGATAACAGACATG 58.126 33.333 3.81 0.00 35.99 3.21
156 157 9.436957 AACAGAATTTCGTTAGATAACAGACAT 57.563 29.630 3.81 0.00 35.99 3.06
157 158 8.708742 CAACAGAATTTCGTTAGATAACAGACA 58.291 33.333 3.81 0.00 35.99 3.41
158 159 8.709646 ACAACAGAATTTCGTTAGATAACAGAC 58.290 33.333 3.81 0.00 35.99 3.51
159 160 8.827177 ACAACAGAATTTCGTTAGATAACAGA 57.173 30.769 3.81 0.00 35.99 3.41
160 161 9.878599 AAACAACAGAATTTCGTTAGATAACAG 57.121 29.630 3.81 0.00 35.99 3.16
244 247 0.247145 CCGTTTAGCGCACGTGATTC 60.247 55.000 22.23 6.89 39.71 2.52
273 276 1.148273 GCCGATAATGGGCCTGTCA 59.852 57.895 4.53 0.00 44.97 3.58
307 310 1.927569 GAAGGGAAGGGAAGGAGGCC 61.928 65.000 0.00 0.00 0.00 5.19
309 312 1.282653 GGGAAGGGAAGGGAAGGAGG 61.283 65.000 0.00 0.00 0.00 4.30
310 313 0.253394 AGGGAAGGGAAGGGAAGGAG 60.253 60.000 0.00 0.00 0.00 3.69
311 314 0.198696 AAGGGAAGGGAAGGGAAGGA 59.801 55.000 0.00 0.00 0.00 3.36
312 315 0.626382 GAAGGGAAGGGAAGGGAAGG 59.374 60.000 0.00 0.00 0.00 3.46
313 316 0.626382 GGAAGGGAAGGGAAGGGAAG 59.374 60.000 0.00 0.00 0.00 3.46
314 317 0.103608 TGGAAGGGAAGGGAAGGGAA 60.104 55.000 0.00 0.00 0.00 3.97
315 318 0.845102 GTGGAAGGGAAGGGAAGGGA 60.845 60.000 0.00 0.00 0.00 4.20
317 320 0.038310 GTGTGGAAGGGAAGGGAAGG 59.962 60.000 0.00 0.00 0.00 3.46
318 321 0.038310 GGTGTGGAAGGGAAGGGAAG 59.962 60.000 0.00 0.00 0.00 3.46
319 322 0.402861 AGGTGTGGAAGGGAAGGGAA 60.403 55.000 0.00 0.00 0.00 3.97
320 323 0.402861 AAGGTGTGGAAGGGAAGGGA 60.403 55.000 0.00 0.00 0.00 4.20
321 324 0.482887 AAAGGTGTGGAAGGGAAGGG 59.517 55.000 0.00 0.00 0.00 3.95
322 325 1.425448 AGAAAGGTGTGGAAGGGAAGG 59.575 52.381 0.00 0.00 0.00 3.46
323 326 2.373502 AGAGAAAGGTGTGGAAGGGAAG 59.626 50.000 0.00 0.00 0.00 3.46
324 327 2.418669 AGAGAAAGGTGTGGAAGGGAA 58.581 47.619 0.00 0.00 0.00 3.97
343 346 0.540923 CTGGCTGGGAGGAAGAGAAG 59.459 60.000 0.00 0.00 0.00 2.85
356 359 1.078143 GGCAAGTAGGGTCTGGCTG 60.078 63.158 0.00 0.00 34.99 4.85
357 360 1.229658 AGGCAAGTAGGGTCTGGCT 60.230 57.895 0.00 0.00 34.99 4.75
358 361 1.222113 GAGGCAAGTAGGGTCTGGC 59.778 63.158 0.00 0.00 33.93 4.85
476 480 3.906718 GGTCGGAGAGAGCGAGAA 58.093 61.111 0.00 0.00 36.95 2.87
483 487 2.359404 GGAGGGTGGTCGGAGAGA 59.641 66.667 0.00 0.00 36.95 3.10
650 670 3.376918 GCCCAGGCCAGAAGTTGC 61.377 66.667 5.01 0.00 34.56 4.17
696 716 2.027751 GGCGGATCTAGACGGTGC 59.972 66.667 0.00 0.00 0.00 5.01
740 765 1.635663 ATGCGCGTTCAGTTACCAGC 61.636 55.000 8.43 0.00 0.00 4.85
741 766 0.370273 GATGCGCGTTCAGTTACCAG 59.630 55.000 8.43 0.00 0.00 4.00
747 772 0.175760 ATAGGTGATGCGCGTTCAGT 59.824 50.000 8.43 6.64 0.00 3.41
779 804 3.868757 ATAAACAGTAGAGCGTCTGCA 57.131 42.857 6.05 0.00 46.23 4.41
804 829 1.039856 GCACTTGGTGTGGGATTGTT 58.960 50.000 0.00 0.00 46.27 2.83
805 830 0.106268 TGCACTTGGTGTGGGATTGT 60.106 50.000 0.00 0.00 46.27 2.71
806 831 0.599558 CTGCACTTGGTGTGGGATTG 59.400 55.000 0.00 0.00 46.27 2.67
823 848 5.050837 GGAAATTTTTACTGTGCAGCAACTG 60.051 40.000 0.00 0.00 34.12 3.16
825 850 4.211164 GGGAAATTTTTACTGTGCAGCAAC 59.789 41.667 0.00 0.00 0.00 4.17
826 851 4.376146 GGGAAATTTTTACTGTGCAGCAA 58.624 39.130 0.00 0.00 0.00 3.91
827 852 3.244044 GGGGAAATTTTTACTGTGCAGCA 60.244 43.478 0.00 0.00 0.00 4.41
881 907 1.741706 TGTTAGAGACCGCGGAAGTAG 59.258 52.381 35.90 3.66 0.00 2.57
888 914 2.607187 ACAATCTTGTTAGAGACCGCG 58.393 47.619 0.00 0.00 38.47 6.46
920 946 7.566760 TCTACAGCAAGAAAAATCAACAGAA 57.433 32.000 0.00 0.00 0.00 3.02
921 947 7.566760 TTCTACAGCAAGAAAAATCAACAGA 57.433 32.000 0.00 0.00 32.59 3.41
943 969 5.563842 CAACGAATTAACAGAGGCAGATTC 58.436 41.667 0.00 0.00 0.00 2.52
1042 1068 2.274760 CCGTCGGGGGTCTAGAGT 59.725 66.667 2.34 0.00 0.00 3.24
1145 1176 5.618056 TTCAAATCAAGTGACTGAGATGC 57.382 39.130 2.16 0.00 0.00 3.91
1160 1191 6.704512 ATGTACGCCACAAAATTTCAAATC 57.295 33.333 0.00 0.00 41.55 2.17
1163 1194 5.352284 ACAATGTACGCCACAAAATTTCAA 58.648 33.333 0.00 0.00 41.55 2.69
1215 1249 8.141268 GGACTAGATATTCAGAAAGGACTTCAG 58.859 40.741 0.00 0.00 36.40 3.02
1217 1251 8.245195 AGGACTAGATATTCAGAAAGGACTTC 57.755 38.462 0.00 0.00 0.00 3.01
1338 1373 4.104086 TCACTTCACACCAGAGGGAATAT 58.896 43.478 0.00 0.00 38.05 1.28
1362 1397 8.946085 CAAAATAAACAGGTAGATGAGTGCTTA 58.054 33.333 0.00 0.00 0.00 3.09
1574 1610 7.981225 ACAGAAAACAAAGCAAATTGTGATAGT 59.019 29.630 3.72 0.00 42.49 2.12
1597 1633 1.594397 CTACATATGCACGCCACACAG 59.406 52.381 1.58 0.00 0.00 3.66
1600 1636 1.650825 CACTACATATGCACGCCACA 58.349 50.000 1.58 0.00 0.00 4.17
1612 1648 6.721318 ACTAACATCCACAAATCCACTACAT 58.279 36.000 0.00 0.00 0.00 2.29
1639 1675 9.982651 GAAGTAAATTATACTCTGTATGCTGGA 57.017 33.333 0.96 0.00 0.00 3.86
1772 1808 7.090319 AGGGCATATGGTAGTTTGATATTCA 57.910 36.000 4.56 0.00 0.00 2.57
1873 2106 9.314133 ACTTGAGATTGACATACAGCCTATATA 57.686 33.333 0.00 0.00 0.00 0.86
1874 2107 8.200024 ACTTGAGATTGACATACAGCCTATAT 57.800 34.615 0.00 0.00 0.00 0.86
1889 2234 9.877178 ACTAACCTTACTGATAACTTGAGATTG 57.123 33.333 0.00 0.00 0.00 2.67
1909 2254 5.741962 AGAGTTTAGGGACAAGACTAACC 57.258 43.478 0.00 0.00 0.00 2.85
1974 2319 1.959226 GGCCGACGAGCACTTGAAA 60.959 57.895 0.00 0.00 0.00 2.69
2010 2357 4.755411 CTTTAGATCAAAGGACGTAGCCA 58.245 43.478 0.00 0.00 40.08 4.75
2145 2492 8.725148 CATGGAAAGTTGCATAGGATAGTAATC 58.275 37.037 0.00 0.00 37.10 1.75
2472 2821 5.714333 TGCCAAAATACCATCTAAGCAGAAA 59.286 36.000 0.00 0.00 33.50 2.52
2474 2823 4.640201 GTGCCAAAATACCATCTAAGCAGA 59.360 41.667 0.00 0.00 34.56 4.26
2498 2847 5.151297 TGACTGCTGACATAACATCTGAA 57.849 39.130 0.00 0.00 0.00 3.02
2619 2970 3.552132 TGAAACAGCTGTTGTACCTGA 57.448 42.857 31.73 8.10 39.73 3.86
2627 2978 2.242043 CTTGGGGATGAAACAGCTGTT 58.758 47.619 26.36 26.36 40.50 3.16
2674 3025 1.305219 GCTATTGACAGTTGCCGGCA 61.305 55.000 29.03 29.03 0.00 5.69
2817 3168 2.089201 AGTTATACCGCCAAAAGGTGC 58.911 47.619 0.00 0.00 42.83 5.01
2970 3321 2.753009 ATTTGCTGCTGTCGCCAGGA 62.753 55.000 0.00 0.00 39.22 3.86
3017 3368 4.347813 CGTGTTAGTTGGTGTTGAAAAGG 58.652 43.478 0.00 0.00 0.00 3.11
3045 3396 3.623060 GGAAAGTCGATTTGCTGCTATCA 59.377 43.478 0.00 0.00 36.38 2.15
3287 3638 3.959495 ATATTGTGGACAGGCCTCATT 57.041 42.857 0.00 0.00 39.71 2.57
3299 3650 5.058490 GCCATTCCCATTCAAATATTGTGG 58.942 41.667 0.00 0.00 0.00 4.17
3313 3664 1.422531 ACAAAGCTTTGCCATTCCCA 58.577 45.000 33.72 0.00 41.79 4.37
3343 3694 8.892723 CAACCATAGTGCTAAAATGACAATAGA 58.107 33.333 0.00 0.00 0.00 1.98
3344 3695 8.677300 ACAACCATAGTGCTAAAATGACAATAG 58.323 33.333 0.00 0.00 0.00 1.73
3364 3715 6.578023 TGACGATACATCAATCATACAACCA 58.422 36.000 0.00 0.00 0.00 3.67
3380 3731 3.128068 GGATTTGGTTGGGTTGACGATAC 59.872 47.826 0.00 0.00 0.00 2.24
3496 3847 9.985730 AATTGCCATTACACAAAATAGGATATG 57.014 29.630 0.00 0.00 0.00 1.78
3614 3967 5.361571 TCTGAACTGCGTAGGAAATGGTATA 59.638 40.000 5.26 0.00 0.00 1.47
3615 3968 4.161565 TCTGAACTGCGTAGGAAATGGTAT 59.838 41.667 5.26 0.00 0.00 2.73
3693 4053 2.995939 TCATCATCAGAGTTTCACGTGC 59.004 45.455 11.67 0.00 0.00 5.34
3910 4272 1.747367 CGGGTGGAGCGGCAAATTA 60.747 57.895 1.45 0.00 0.00 1.40
4010 4393 2.039879 AGGCGAAAACCACCTACAAGAT 59.960 45.455 0.00 0.00 29.98 2.40
4037 4420 2.048444 ATGTTAGATGGTGCCTGCAG 57.952 50.000 6.78 6.78 0.00 4.41
4099 4482 2.439135 TGGGGATGATACAGTGATGTGG 59.561 50.000 0.00 0.00 0.00 4.17
4100 4483 3.843893 TGGGGATGATACAGTGATGTG 57.156 47.619 0.00 0.00 0.00 3.21
4145 4795 6.122850 TGTAATGAAATCTTGAGCATTCCG 57.877 37.500 0.00 0.00 33.45 4.30
4164 4814 9.230122 TCTTGAATGATAAACTGCATCTTGTAA 57.770 29.630 0.00 0.00 0.00 2.41
4254 5176 6.992063 TTTGCTTTAAGAGTCATGATCTCC 57.008 37.500 16.74 0.00 32.93 3.71
4528 5450 1.420138 CTTCAACCACTACCCCACAGT 59.580 52.381 0.00 0.00 0.00 3.55
4560 5482 1.302033 CACTGGCTGGTGGACACTC 60.302 63.158 2.13 0.00 33.95 3.51
4575 5497 3.322466 CGGGGCCTGGAACTCACT 61.322 66.667 3.77 0.00 0.00 3.41
4591 5513 1.009829 GGTTAGCATCTTGAGTGGCG 58.990 55.000 0.00 0.00 0.00 5.69
4654 5576 1.688735 CTGGCATGGAATCCTACGAGA 59.311 52.381 0.00 0.00 0.00 4.04
4657 5579 0.179048 TGCTGGCATGGAATCCTACG 60.179 55.000 0.00 0.00 0.00 3.51
4789 5712 6.983906 AAGAGACAAGAAAAATTCACCCAT 57.016 33.333 0.00 0.00 0.00 4.00
4838 5768 3.368013 GGTTGGCCACAAAATAACCTAGC 60.368 47.826 3.88 0.00 38.54 3.42
4846 5776 2.225496 TGATAGGGGTTGGCCACAAAAT 60.225 45.455 3.88 0.00 41.86 1.82
4850 5780 0.844661 AGTGATAGGGGTTGGCCACA 60.845 55.000 3.88 0.00 41.86 4.17
4945 5875 5.412594 GCATCTGACCATTCAAACAAGAGTA 59.587 40.000 0.00 0.00 0.00 2.59
5129 6059 5.349817 CAGAACACTTGAATAGTAGCACTGG 59.650 44.000 0.00 0.00 34.56 4.00
5184 6114 5.471797 TCGTGCTACATGAATGGAAAAAGAA 59.528 36.000 0.00 0.00 0.00 2.52
5185 6115 5.000591 TCGTGCTACATGAATGGAAAAAGA 58.999 37.500 0.00 0.00 0.00 2.52
5186 6116 5.295431 TCGTGCTACATGAATGGAAAAAG 57.705 39.130 0.00 0.00 0.00 2.27
5206 6136 1.942657 CAACCCTTGGTAGCATCATCG 59.057 52.381 0.00 0.00 33.12 3.84
5242 6172 3.908476 ACATCTGATAGAGAGCTGACCA 58.092 45.455 0.00 0.00 32.80 4.02
5335 6265 8.150945 GGATTAGTATATGTCAGCAGAAAAGGA 58.849 37.037 0.00 0.00 0.00 3.36
5355 6285 8.103948 ACTGAAGACAAATGAACTTGGATTAG 57.896 34.615 0.00 0.00 0.00 1.73
5434 6364 9.357161 ACACCAATAGTAAAACAATTACTGGAA 57.643 29.630 10.33 0.00 36.67 3.53
5494 6424 3.814504 ACCCAGGACAAATGAATCTGT 57.185 42.857 0.00 0.00 0.00 3.41
5509 6439 6.823689 AGCACTAAATACTGTATGAAACCCAG 59.176 38.462 0.22 0.00 0.00 4.45
5548 6478 7.120873 CAGCCAAGATGATAGAAATATCCAAGG 59.879 40.741 0.00 0.00 0.00 3.61
5553 6484 5.942236 TGCCAGCCAAGATGATAGAAATATC 59.058 40.000 0.00 0.00 0.00 1.63
5606 6537 5.594317 TCTGACAGCAGTATAACAGATAGCA 59.406 40.000 0.00 0.00 42.84 3.49
5607 6538 6.078202 TCTGACAGCAGTATAACAGATAGC 57.922 41.667 0.00 0.00 42.84 2.97
5950 6888 4.819761 GATCAGTCCAGCGGCGCA 62.820 66.667 35.02 11.09 0.00 6.09
6005 6944 7.033185 CCTAAACATTACCACTATTGCCAAAC 58.967 38.462 0.00 0.00 0.00 2.93
6031 6970 0.815615 CAGCAAGTTATCGAGCCCCC 60.816 60.000 0.00 0.00 0.00 5.40
6085 7024 0.179108 CTTAGGTGTGTAGCTCGGGC 60.179 60.000 0.00 0.00 35.90 6.13
6111 7050 3.647590 AGGCAACAAAAATTCATCCAGGT 59.352 39.130 0.00 0.00 41.41 4.00
6131 7076 2.421424 ACGACCAGCTAAACGTACTAGG 59.579 50.000 8.96 0.00 37.22 3.02
6138 7083 1.214367 ACAACACGACCAGCTAAACG 58.786 50.000 0.00 0.00 0.00 3.60
6190 7138 0.392193 CTGGAGCCAACAGGTGCTAG 60.392 60.000 0.00 0.00 38.11 3.42
6299 7247 4.393062 AGACAATTCCATAGCTGAACAACG 59.607 41.667 0.00 0.00 0.00 4.10
6301 7249 5.316167 ACAGACAATTCCATAGCTGAACAA 58.684 37.500 0.00 0.00 0.00 2.83
6333 7281 4.474651 TCTCCCTAAATCCAGATTGCAAGA 59.525 41.667 4.94 0.00 0.00 3.02
6351 7299 6.149474 CACCGTTTTCCATATGATATTCTCCC 59.851 42.308 3.65 0.00 0.00 4.30
6352 7300 6.149474 CCACCGTTTTCCATATGATATTCTCC 59.851 42.308 3.65 0.00 0.00 3.71
6353 7301 6.934645 TCCACCGTTTTCCATATGATATTCTC 59.065 38.462 3.65 0.00 0.00 2.87
6354 7302 6.837312 TCCACCGTTTTCCATATGATATTCT 58.163 36.000 3.65 0.00 0.00 2.40
6355 7303 6.934645 TCTCCACCGTTTTCCATATGATATTC 59.065 38.462 3.65 0.00 0.00 1.75
6356 7304 6.837312 TCTCCACCGTTTTCCATATGATATT 58.163 36.000 3.65 0.00 0.00 1.28
6357 7305 6.043243 ACTCTCCACCGTTTTCCATATGATAT 59.957 38.462 3.65 0.00 0.00 1.63
6358 7306 5.365605 ACTCTCCACCGTTTTCCATATGATA 59.634 40.000 3.65 0.00 0.00 2.15
6359 7307 4.164221 ACTCTCCACCGTTTTCCATATGAT 59.836 41.667 3.65 0.00 0.00 2.45
6360 7308 3.517901 ACTCTCCACCGTTTTCCATATGA 59.482 43.478 3.65 0.00 0.00 2.15
6361 7309 3.623060 CACTCTCCACCGTTTTCCATATG 59.377 47.826 0.00 0.00 0.00 1.78
6362 7310 3.370527 CCACTCTCCACCGTTTTCCATAT 60.371 47.826 0.00 0.00 0.00 1.78
6363 7311 2.027561 CCACTCTCCACCGTTTTCCATA 60.028 50.000 0.00 0.00 0.00 2.74
6364 7312 1.271379 CCACTCTCCACCGTTTTCCAT 60.271 52.381 0.00 0.00 0.00 3.41
6365 7313 0.107831 CCACTCTCCACCGTTTTCCA 59.892 55.000 0.00 0.00 0.00 3.53
6366 7314 0.108019 ACCACTCTCCACCGTTTTCC 59.892 55.000 0.00 0.00 0.00 3.13
6367 7315 1.202604 TCACCACTCTCCACCGTTTTC 60.203 52.381 0.00 0.00 0.00 2.29
6368 7316 0.834612 TCACCACTCTCCACCGTTTT 59.165 50.000 0.00 0.00 0.00 2.43
6369 7317 0.834612 TTCACCACTCTCCACCGTTT 59.165 50.000 0.00 0.00 0.00 3.60
6370 7318 1.056660 ATTCACCACTCTCCACCGTT 58.943 50.000 0.00 0.00 0.00 4.44
6371 7319 1.056660 AATTCACCACTCTCCACCGT 58.943 50.000 0.00 0.00 0.00 4.83
6372 7320 3.133003 AGATAATTCACCACTCTCCACCG 59.867 47.826 0.00 0.00 0.00 4.94
6373 7321 4.698575 GAGATAATTCACCACTCTCCACC 58.301 47.826 0.00 0.00 0.00 4.61
6374 7322 4.363999 CGAGATAATTCACCACTCTCCAC 58.636 47.826 0.00 0.00 30.82 4.02
6375 7323 3.181475 GCGAGATAATTCACCACTCTCCA 60.181 47.826 0.00 0.00 30.82 3.86
6376 7324 3.181475 TGCGAGATAATTCACCACTCTCC 60.181 47.826 0.00 0.00 30.82 3.71
6377 7325 4.046938 TGCGAGATAATTCACCACTCTC 57.953 45.455 0.00 0.00 0.00 3.20
6378 7326 4.471904 TTGCGAGATAATTCACCACTCT 57.528 40.909 0.00 0.00 0.00 3.24
6379 7327 5.505286 CAATTGCGAGATAATTCACCACTC 58.495 41.667 0.00 0.00 0.00 3.51
6382 7330 4.291540 GCAATTGCGAGATAATTCACCA 57.708 40.909 15.87 0.00 0.00 4.17
6398 7346 1.896220 TGCTCTCTTGTTCCGCAATT 58.104 45.000 0.00 0.00 36.36 2.32
6426 7374 7.550196 AATGAAAAACATTTCAGCAAACTGAGT 59.450 29.630 9.53 0.00 45.15 3.41
6429 7377 7.795272 GCTAATGAAAAACATTTCAGCAAACTG 59.205 33.333 9.53 0.00 45.60 3.16
6430 7378 7.854534 GCTAATGAAAAACATTTCAGCAAACT 58.145 30.769 9.53 0.00 45.60 2.66
6437 7386 8.177119 AGGTACTGCTAATGAAAAACATTTCA 57.823 30.769 6.47 6.47 41.53 2.69
6465 7414 2.910688 ATACATTACAGCCACCCGAG 57.089 50.000 0.00 0.00 0.00 4.63
6467 7416 3.194005 AGAATACATTACAGCCACCCG 57.806 47.619 0.00 0.00 0.00 5.28
6468 7417 4.576463 CAGAAGAATACATTACAGCCACCC 59.424 45.833 0.00 0.00 0.00 4.61
6516 7466 4.617959 GGGCAAACCTAAGACTTCAAAAC 58.382 43.478 0.00 0.00 35.85 2.43
6539 7490 4.933400 GTCAGGCTTACGAATTTTGACCTA 59.067 41.667 0.00 0.00 0.00 3.08
6552 7503 6.995511 TTTTATGTACATGGTCAGGCTTAC 57.004 37.500 18.81 0.00 0.00 2.34
6712 7685 0.109319 CCCTCCGCCGTTTCAAAATG 60.109 55.000 0.00 0.00 0.00 2.32
6714 7687 0.752376 AACCCTCCGCCGTTTCAAAA 60.752 50.000 0.00 0.00 0.00 2.44
6726 7699 1.641192 AGATCCCTGGAAAAACCCTCC 59.359 52.381 0.00 0.00 38.00 4.30
6741 7714 4.889409 TGTGCAAAATATCTGGGAAGATCC 59.111 41.667 0.00 0.00 35.23 3.36
6742 7715 5.506982 GCTGTGCAAAATATCTGGGAAGATC 60.507 44.000 0.00 0.00 0.00 2.75
6743 7716 4.340381 GCTGTGCAAAATATCTGGGAAGAT 59.660 41.667 0.00 0.00 0.00 2.40
6744 7717 3.696051 GCTGTGCAAAATATCTGGGAAGA 59.304 43.478 0.00 0.00 0.00 2.87
6745 7718 3.444742 TGCTGTGCAAAATATCTGGGAAG 59.555 43.478 0.00 0.00 34.76 3.46
6746 7719 3.193267 GTGCTGTGCAAAATATCTGGGAA 59.807 43.478 0.00 0.00 41.47 3.97
6747 7720 2.754552 GTGCTGTGCAAAATATCTGGGA 59.245 45.455 0.00 0.00 41.47 4.37
6748 7721 2.478370 CGTGCTGTGCAAAATATCTGGG 60.478 50.000 0.00 0.00 41.47 4.45
6749 7722 2.419673 TCGTGCTGTGCAAAATATCTGG 59.580 45.455 0.00 0.00 41.47 3.86
6750 7723 3.745332 TCGTGCTGTGCAAAATATCTG 57.255 42.857 0.00 0.00 41.47 2.90
6751 7724 6.484643 AGAATATCGTGCTGTGCAAAATATCT 59.515 34.615 0.00 0.00 41.47 1.98
6752 7725 6.662616 AGAATATCGTGCTGTGCAAAATATC 58.337 36.000 0.00 0.00 41.47 1.63
6753 7726 6.260714 TGAGAATATCGTGCTGTGCAAAATAT 59.739 34.615 0.00 0.00 41.47 1.28
6754 7727 5.584251 TGAGAATATCGTGCTGTGCAAAATA 59.416 36.000 0.00 0.00 41.47 1.40
6755 7728 4.395854 TGAGAATATCGTGCTGTGCAAAAT 59.604 37.500 0.00 0.00 41.47 1.82
6756 7729 3.750652 TGAGAATATCGTGCTGTGCAAAA 59.249 39.130 0.00 0.00 41.47 2.44
6757 7730 3.333804 TGAGAATATCGTGCTGTGCAAA 58.666 40.909 0.00 0.00 41.47 3.68
6758 7731 2.971307 TGAGAATATCGTGCTGTGCAA 58.029 42.857 0.00 0.00 41.47 4.08
6759 7732 2.671130 TGAGAATATCGTGCTGTGCA 57.329 45.000 0.00 0.00 35.60 4.57
6760 7733 3.806521 AGAATGAGAATATCGTGCTGTGC 59.193 43.478 0.00 0.00 30.83 4.57
6761 7734 5.752472 AGAAGAATGAGAATATCGTGCTGTG 59.248 40.000 0.00 0.00 32.58 3.66
6762 7735 5.911752 AGAAGAATGAGAATATCGTGCTGT 58.088 37.500 0.00 0.00 32.58 4.40
6763 7736 6.841443 AAGAAGAATGAGAATATCGTGCTG 57.159 37.500 0.00 0.00 32.58 4.41
6764 7737 7.044181 TGAAAGAAGAATGAGAATATCGTGCT 58.956 34.615 0.00 0.00 33.79 4.40
6765 7738 7.223582 TCTGAAAGAAGAATGAGAATATCGTGC 59.776 37.037 0.00 0.00 42.31 5.34
6766 7739 8.640091 TCTGAAAGAAGAATGAGAATATCGTG 57.360 34.615 0.00 0.00 42.31 4.35
6783 7756 5.125356 TGTGAATCTGCAAGTTCTGAAAGA 58.875 37.500 10.88 0.00 44.68 2.52
6784 7757 5.428496 TGTGAATCTGCAAGTTCTGAAAG 57.572 39.130 10.88 0.00 33.76 2.62
6785 7758 6.395426 AATGTGAATCTGCAAGTTCTGAAA 57.605 33.333 10.88 0.00 33.76 2.69
6786 7759 5.048504 GGAATGTGAATCTGCAAGTTCTGAA 60.049 40.000 10.88 0.00 33.76 3.02
6787 7760 4.456911 GGAATGTGAATCTGCAAGTTCTGA 59.543 41.667 10.88 0.00 33.76 3.27
6788 7761 4.458295 AGGAATGTGAATCTGCAAGTTCTG 59.542 41.667 10.88 0.00 33.76 3.02
6789 7762 4.660168 AGGAATGTGAATCTGCAAGTTCT 58.340 39.130 10.88 0.00 33.76 3.01
6790 7763 5.159209 CAAGGAATGTGAATCTGCAAGTTC 58.841 41.667 4.26 4.26 33.76 3.01
6791 7764 4.586001 ACAAGGAATGTGAATCTGCAAGTT 59.414 37.500 0.00 0.00 41.93 2.66
6792 7765 4.147321 ACAAGGAATGTGAATCTGCAAGT 58.853 39.130 0.00 0.00 41.93 3.16
6793 7766 4.778534 ACAAGGAATGTGAATCTGCAAG 57.221 40.909 0.00 0.00 41.93 4.01
6794 7767 5.181811 CACTACAAGGAATGTGAATCTGCAA 59.818 40.000 0.00 0.00 43.77 4.08
6795 7768 4.696877 CACTACAAGGAATGTGAATCTGCA 59.303 41.667 0.00 0.00 43.77 4.41
6796 7769 4.437930 GCACTACAAGGAATGTGAATCTGC 60.438 45.833 0.00 0.00 43.77 4.26
6797 7770 4.696877 TGCACTACAAGGAATGTGAATCTG 59.303 41.667 0.00 0.00 43.77 2.90
6798 7771 4.910195 TGCACTACAAGGAATGTGAATCT 58.090 39.130 0.00 0.00 43.77 2.40
6799 7772 5.627499 TTGCACTACAAGGAATGTGAATC 57.373 39.130 0.00 0.00 43.77 2.52
6800 7773 6.594788 ATTTGCACTACAAGGAATGTGAAT 57.405 33.333 0.00 0.00 43.77 2.57
6801 7774 6.403866 AATTTGCACTACAAGGAATGTGAA 57.596 33.333 0.00 0.00 43.77 3.18
6802 7775 6.349280 GCTAATTTGCACTACAAGGAATGTGA 60.349 38.462 7.02 0.00 43.77 3.58
6803 7776 5.801947 GCTAATTTGCACTACAAGGAATGTG 59.198 40.000 7.02 0.00 43.77 3.21
6804 7777 5.711976 AGCTAATTTGCACTACAAGGAATGT 59.288 36.000 14.27 0.00 40.06 2.71
6805 7778 6.199937 AGCTAATTTGCACTACAAGGAATG 57.800 37.500 14.27 0.00 40.06 2.67
6806 7779 6.884295 TGTAGCTAATTTGCACTACAAGGAAT 59.116 34.615 14.27 0.00 41.37 3.01
6807 7780 6.234920 TGTAGCTAATTTGCACTACAAGGAA 58.765 36.000 14.27 0.00 41.37 3.36
6808 7781 5.800296 TGTAGCTAATTTGCACTACAAGGA 58.200 37.500 14.27 0.00 41.37 3.36
6809 7782 5.643777 ACTGTAGCTAATTTGCACTACAAGG 59.356 40.000 14.27 6.77 43.10 3.61
6810 7783 6.727824 ACTGTAGCTAATTTGCACTACAAG 57.272 37.500 14.27 10.25 43.10 3.16
6811 7784 7.876068 AGTAACTGTAGCTAATTTGCACTACAA 59.124 33.333 14.27 0.00 43.10 2.41
6812 7785 7.383687 AGTAACTGTAGCTAATTTGCACTACA 58.616 34.615 14.27 12.63 41.90 2.74
6813 7786 7.829378 AGTAACTGTAGCTAATTTGCACTAC 57.171 36.000 14.27 9.01 36.40 2.73
6815 7788 9.751542 CTATAGTAACTGTAGCTAATTTGCACT 57.248 33.333 14.27 8.86 34.99 4.40
6816 7789 8.979574 CCTATAGTAACTGTAGCTAATTTGCAC 58.020 37.037 14.27 10.19 34.99 4.57
6817 7790 8.920174 TCCTATAGTAACTGTAGCTAATTTGCA 58.080 33.333 14.27 0.00 34.99 4.08
6818 7791 9.413048 CTCCTATAGTAACTGTAGCTAATTTGC 57.587 37.037 3.49 3.49 0.00 3.68
6822 7795 9.729281 GAGACTCCTATAGTAACTGTAGCTAAT 57.271 37.037 0.00 0.00 39.07 1.73
6823 7796 8.712103 TGAGACTCCTATAGTAACTGTAGCTAA 58.288 37.037 0.00 0.00 39.07 3.09
6824 7797 8.149647 GTGAGACTCCTATAGTAACTGTAGCTA 58.850 40.741 0.00 0.00 39.07 3.32
6825 7798 6.993902 GTGAGACTCCTATAGTAACTGTAGCT 59.006 42.308 0.00 0.00 39.07 3.32
6826 7799 6.073657 CGTGAGACTCCTATAGTAACTGTAGC 60.074 46.154 0.00 0.00 39.07 3.58
6827 7800 6.073657 GCGTGAGACTCCTATAGTAACTGTAG 60.074 46.154 0.00 0.00 39.07 2.74
6828 7801 5.757320 GCGTGAGACTCCTATAGTAACTGTA 59.243 44.000 0.00 0.00 39.07 2.74
6838 7811 2.879002 CACATGCGTGAGACTCCTAT 57.121 50.000 14.17 0.00 46.80 2.57
6896 7869 2.690778 GCCACTCCGGTGCATGAAC 61.691 63.158 0.00 0.00 41.75 3.18
6902 7875 3.357079 CACAAGCCACTCCGGTGC 61.357 66.667 0.00 0.06 41.75 5.01
6914 7887 2.707849 GCATGGAGCCTGGCACAAG 61.708 63.158 22.65 16.57 38.70 3.16
6915 7888 2.677524 GCATGGAGCCTGGCACAA 60.678 61.111 22.65 8.87 38.70 3.33
6916 7889 3.931190 CTGCATGGAGCCTGGCACA 62.931 63.158 22.65 19.25 44.83 4.57
6917 7890 3.138798 CTGCATGGAGCCTGGCAC 61.139 66.667 22.65 15.18 44.83 5.01
6918 7891 3.332385 TCTGCATGGAGCCTGGCA 61.332 61.111 22.65 0.00 44.83 4.92
6919 7892 2.516460 CTCTGCATGGAGCCTGGC 60.516 66.667 11.65 11.65 44.83 4.85
6920 7893 2.192443 CCTCTGCATGGAGCCTGG 59.808 66.667 9.76 7.75 44.83 4.45
6921 7894 2.516460 GCCTCTGCATGGAGCCTG 60.516 66.667 9.76 1.37 44.83 4.85
6922 7895 3.806667 GGCCTCTGCATGGAGCCT 61.807 66.667 9.76 0.00 44.83 4.58
6923 7896 4.891037 GGGCCTCTGCATGGAGCC 62.891 72.222 9.76 8.43 44.83 4.70
6924 7897 3.650298 TTGGGCCTCTGCATGGAGC 62.650 63.158 9.76 0.00 45.96 4.70
6925 7898 1.751927 GTTGGGCCTCTGCATGGAG 60.752 63.158 8.12 8.12 40.13 3.86
6926 7899 2.356278 GTTGGGCCTCTGCATGGA 59.644 61.111 4.53 0.00 40.13 3.41
6927 7900 3.136123 CGTTGGGCCTCTGCATGG 61.136 66.667 4.53 1.87 40.13 3.66
6928 7901 3.818787 GCGTTGGGCCTCTGCATG 61.819 66.667 4.53 0.00 40.13 4.06
6929 7902 3.650298 ATGCGTTGGGCCTCTGCAT 62.650 57.895 19.45 19.45 42.61 3.96
6930 7903 4.349503 ATGCGTTGGGCCTCTGCA 62.350 61.111 17.01 17.01 42.61 4.41
6931 7904 3.818787 CATGCGTTGGGCCTCTGC 61.819 66.667 4.53 6.28 42.61 4.26
6932 7905 1.675310 TTCATGCGTTGGGCCTCTG 60.675 57.895 4.53 0.00 42.61 3.35
6933 7906 1.675641 GTTCATGCGTTGGGCCTCT 60.676 57.895 4.53 0.00 42.61 3.69
6934 7907 1.523154 TTGTTCATGCGTTGGGCCTC 61.523 55.000 4.53 0.00 42.61 4.70
6935 7908 1.112315 TTTGTTCATGCGTTGGGCCT 61.112 50.000 4.53 0.00 42.61 5.19
6936 7909 0.667184 CTTTGTTCATGCGTTGGGCC 60.667 55.000 0.00 0.00 42.61 5.80
6937 7910 0.031994 ACTTTGTTCATGCGTTGGGC 59.968 50.000 0.00 0.00 43.96 5.36
6938 7911 3.634568 TTACTTTGTTCATGCGTTGGG 57.365 42.857 0.00 0.00 0.00 4.12
6939 7912 4.143347 GCATTTACTTTGTTCATGCGTTGG 60.143 41.667 0.00 0.00 31.55 3.77
6940 7913 4.443725 TGCATTTACTTTGTTCATGCGTTG 59.556 37.500 0.00 0.00 42.68 4.10
6941 7914 4.615949 TGCATTTACTTTGTTCATGCGTT 58.384 34.783 0.00 0.00 42.68 4.84
6942 7915 4.235939 TGCATTTACTTTGTTCATGCGT 57.764 36.364 0.00 0.00 42.68 5.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.