Multiple sequence alignment - TraesCS2A01G593600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G593600 chr2A 100.000 3490 0 0 1 3490 780714892 780711403 0.000000e+00 6445.0
1 TraesCS2A01G593600 chr2A 93.277 119 8 0 2716 2834 555342224 555342342 3.580000e-40 176.0
2 TraesCS2A01G593600 chr2D 90.298 1680 112 28 820 2479 633607332 633608980 0.000000e+00 2152.0
3 TraesCS2A01G593600 chr2D 92.603 365 17 6 1 356 633606119 633606482 1.860000e-142 516.0
4 TraesCS2A01G593600 chr2D 86.290 248 31 3 2821 3067 633609319 633609564 2.070000e-67 267.0
5 TraesCS2A01G593600 chr2D 89.565 115 12 0 3115 3229 633685663 633685777 2.810000e-31 147.0
6 TraesCS2A01G593600 chr2D 94.030 67 3 1 3070 3135 633611265 633611331 2.220000e-17 100.0
7 TraesCS2A01G593600 chr2B 89.538 1730 124 26 824 2530 776700040 776701735 0.000000e+00 2139.0
8 TraesCS2A01G593600 chr2B 90.331 362 28 5 1 356 776699311 776699671 5.270000e-128 468.0
9 TraesCS2A01G593600 chr2B 86.047 387 27 11 375 735 776699658 776700043 1.170000e-104 390.0
10 TraesCS2A01G593600 chr2B 83.380 361 38 12 2821 3168 776701908 776702259 7.270000e-82 315.0
11 TraesCS2A01G593600 chr2B 94.643 56 3 0 2544 2599 776701787 776701842 1.730000e-13 87.9
12 TraesCS2A01G593600 chr3B 92.692 260 18 1 3232 3490 464300459 464300200 1.180000e-99 374.0
13 TraesCS2A01G593600 chr7A 92.308 260 19 1 3232 3490 633125888 633125629 5.500000e-98 368.0
14 TraesCS2A01G593600 chr7A 91.892 259 21 0 3232 3490 141216766 141216508 2.560000e-96 363.0
15 TraesCS2A01G593600 chr7A 91.892 259 21 0 3232 3490 142066346 142066088 2.560000e-96 363.0
16 TraesCS2A01G593600 chr7A 91.892 259 21 0 3232 3490 142096348 142096090 2.560000e-96 363.0
17 TraesCS2A01G593600 chr7A 91.892 259 21 0 3232 3490 597836662 597836920 2.560000e-96 363.0
18 TraesCS2A01G593600 chr7A 93.966 116 7 0 2707 2822 66251040 66250925 3.580000e-40 176.0
19 TraesCS2A01G593600 chr6A 91.985 262 16 4 3232 3490 603874523 603874782 2.560000e-96 363.0
20 TraesCS2A01G593600 chr4A 91.892 259 21 0 3232 3490 588843926 588843668 2.560000e-96 363.0
21 TraesCS2A01G593600 chr4A 94.783 115 4 2 2709 2822 278329147 278329260 9.950000e-41 178.0
22 TraesCS2A01G593600 chr4A 94.068 118 5 2 2714 2829 557549791 557549908 9.950000e-41 178.0
23 TraesCS2A01G593600 chr3A 91.892 259 21 0 3232 3490 682702466 682702724 2.560000e-96 363.0
24 TraesCS2A01G593600 chr1D 94.958 119 6 0 2712 2830 247521068 247520950 1.650000e-43 187.0
25 TraesCS2A01G593600 chr5A 96.396 111 4 0 2716 2826 609634093 609634203 2.140000e-42 183.0
26 TraesCS2A01G593600 chr5A 94.737 114 6 0 2713 2826 69844897 69844784 9.950000e-41 178.0
27 TraesCS2A01G593600 chr1A 94.783 115 5 1 2709 2823 499985468 499985355 9.950000e-41 178.0
28 TraesCS2A01G593600 chr6D 91.270 126 11 0 2713 2838 298921093 298920968 4.630000e-39 172.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G593600 chr2A 780711403 780714892 3489 True 6445.00 6445 100.00000 1 3490 1 chr2A.!!$R1 3489
1 TraesCS2A01G593600 chr2D 633606119 633611331 5212 False 758.75 2152 90.80525 1 3135 4 chr2D.!!$F2 3134
2 TraesCS2A01G593600 chr2B 776699311 776702259 2948 False 679.98 2139 88.78780 1 3168 5 chr2B.!!$F1 3167

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
738 792 0.331616 CGGAGGGTTTTTCCAGGGAT 59.668 55.0 0.0 0.0 38.11 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2607 3250 0.986527 TTGATGAAGAGAGGCAGGCA 59.013 50.0 0.0 0.0 0.0 4.75 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 6.767524 TTGGCAATAGTGGTAATGTTTAGG 57.232 37.500 0.00 0.00 0.00 2.69
25 26 5.197451 TGGCAATAGTGGTAATGTTTAGGG 58.803 41.667 0.00 0.00 0.00 3.53
79 80 2.328099 GCCCTGCGGAGTTTCTGTG 61.328 63.158 2.36 0.00 0.00 3.66
105 106 2.632996 AGCTACACACCTAAGAAGCACA 59.367 45.455 0.00 0.00 32.42 4.57
125 132 4.211794 CACACCTGGATGAATTTTTGTTGC 59.788 41.667 0.00 0.00 0.00 4.17
132 139 6.919721 TGGATGAATTTTTGTTGCCTAGTAC 58.080 36.000 0.00 0.00 0.00 2.73
153 160 2.154389 CGTTTAGCTGGTCGTGTTGTAC 59.846 50.000 0.00 0.00 0.00 2.90
293 303 1.956477 ACCATTTCGAGGCCATTATGC 59.044 47.619 5.01 0.00 0.00 3.14
295 305 1.603802 CATTTCGAGGCCATTATGCGT 59.396 47.619 5.01 0.00 0.00 5.24
327 337 5.733620 ATGGAATTGTCTGTTGCTTGAAT 57.266 34.783 0.00 0.00 0.00 2.57
345 355 6.696148 GCTTGAATCTTGCAATCTGGATTTAG 59.304 38.462 11.60 12.26 0.00 1.85
346 356 6.704289 TGAATCTTGCAATCTGGATTTAGG 57.296 37.500 11.60 0.00 0.00 2.69
347 357 5.595542 TGAATCTTGCAATCTGGATTTAGGG 59.404 40.000 11.60 0.00 0.00 3.53
348 358 4.860802 TCTTGCAATCTGGATTTAGGGA 57.139 40.909 0.00 0.00 0.00 4.20
349 359 4.785301 TCTTGCAATCTGGATTTAGGGAG 58.215 43.478 0.00 0.00 0.00 4.30
350 360 4.474651 TCTTGCAATCTGGATTTAGGGAGA 59.525 41.667 0.00 0.00 0.00 3.71
351 361 4.860802 TGCAATCTGGATTTAGGGAGAA 57.139 40.909 0.00 0.00 0.00 2.87
352 362 5.393068 TGCAATCTGGATTTAGGGAGAAT 57.607 39.130 0.00 0.00 0.00 2.40
353 363 6.514012 TGCAATCTGGATTTAGGGAGAATA 57.486 37.500 0.00 0.00 0.00 1.75
354 364 7.095183 TGCAATCTGGATTTAGGGAGAATAT 57.905 36.000 0.00 0.00 0.00 1.28
355 365 7.170965 TGCAATCTGGATTTAGGGAGAATATC 58.829 38.462 0.00 0.00 0.00 1.63
356 366 7.170965 GCAATCTGGATTTAGGGAGAATATCA 58.829 38.462 0.00 0.00 0.00 2.15
357 367 7.833183 GCAATCTGGATTTAGGGAGAATATCAT 59.167 37.037 0.00 0.00 0.00 2.45
361 371 8.996655 TCTGGATTTAGGGAGAATATCATATGG 58.003 37.037 2.13 0.00 0.00 2.74
362 372 8.931904 TGGATTTAGGGAGAATATCATATGGA 57.068 34.615 2.13 0.00 0.00 3.41
363 373 9.350306 TGGATTTAGGGAGAATATCATATGGAA 57.650 33.333 2.13 0.00 0.00 3.53
367 377 9.502091 TTTAGGGAGAATATCATATGGAAAACG 57.498 33.333 2.13 0.00 0.00 3.60
368 378 6.476378 AGGGAGAATATCATATGGAAAACGG 58.524 40.000 2.13 0.00 0.00 4.44
369 379 6.044404 AGGGAGAATATCATATGGAAAACGGT 59.956 38.462 2.13 0.00 0.00 4.83
370 380 6.149474 GGGAGAATATCATATGGAAAACGGTG 59.851 42.308 2.13 0.00 0.00 4.94
371 381 6.149474 GGAGAATATCATATGGAAAACGGTGG 59.851 42.308 2.13 0.00 0.00 4.61
372 382 6.837312 AGAATATCATATGGAAAACGGTGGA 58.163 36.000 2.13 0.00 0.00 4.02
373 383 6.936900 AGAATATCATATGGAAAACGGTGGAG 59.063 38.462 2.13 0.00 0.00 3.86
376 386 3.517901 TCATATGGAAAACGGTGGAGAGT 59.482 43.478 2.13 0.00 0.00 3.24
392 406 3.181475 GGAGAGTGGTGAATTATCTCGCA 60.181 47.826 0.00 0.00 37.80 5.10
420 434 5.391950 GCGGAACAAGAGAGCAATTTCATTA 60.392 40.000 0.00 0.00 0.00 1.90
459 474 6.737254 TGTTTTTCATTAGCAGTACCTAGC 57.263 37.500 0.00 0.00 0.00 3.42
461 476 6.594159 TGTTTTTCATTAGCAGTACCTAGCTC 59.406 38.462 8.17 0.00 42.05 4.09
546 567 3.366985 GGTTTGCCCTAGGTCAAAATTCG 60.367 47.826 19.08 0.00 33.31 3.34
551 574 3.064958 GCCCTAGGTCAAAATTCGTAAGC 59.935 47.826 8.29 0.00 37.18 3.09
706 760 6.688813 CACTTAACAAACAGAGAGCTTCAAAC 59.311 38.462 0.00 0.00 0.00 2.93
732 786 1.457823 AAACGGCGGAGGGTTTTTCC 61.458 55.000 13.24 0.00 32.77 3.13
738 792 0.331616 CGGAGGGTTTTTCCAGGGAT 59.668 55.000 0.00 0.00 38.11 3.85
742 796 3.357203 GAGGGTTTTTCCAGGGATCTTC 58.643 50.000 0.00 0.00 38.11 2.87
759 1216 5.009410 GGATCTTCCCAGATATTTTGCACAG 59.991 44.000 0.00 0.00 40.14 3.66
765 1222 3.065786 CCAGATATTTTGCACAGCACGAT 59.934 43.478 0.00 0.00 38.71 3.73
767 1224 5.049198 CCAGATATTTTGCACAGCACGATAT 60.049 40.000 0.00 0.00 38.71 1.63
768 1225 6.432936 CAGATATTTTGCACAGCACGATATT 58.567 36.000 0.00 0.00 38.71 1.28
769 1226 6.576313 CAGATATTTTGCACAGCACGATATTC 59.424 38.462 0.00 0.00 38.71 1.75
770 1227 4.970662 ATTTTGCACAGCACGATATTCT 57.029 36.364 0.00 0.00 38.71 2.40
771 1228 4.340894 TTTTGCACAGCACGATATTCTC 57.659 40.909 0.00 0.00 38.71 2.87
772 1229 2.671130 TGCACAGCACGATATTCTCA 57.329 45.000 0.00 0.00 31.71 3.27
773 1230 3.183793 TGCACAGCACGATATTCTCAT 57.816 42.857 0.00 0.00 31.71 2.90
774 1231 3.534554 TGCACAGCACGATATTCTCATT 58.465 40.909 0.00 0.00 31.71 2.57
776 1233 3.806521 GCACAGCACGATATTCTCATTCT 59.193 43.478 0.00 0.00 0.00 2.40
778 1235 5.557893 GCACAGCACGATATTCTCATTCTTC 60.558 44.000 0.00 0.00 0.00 2.87
780 1237 6.257411 CACAGCACGATATTCTCATTCTTCTT 59.743 38.462 0.00 0.00 0.00 2.52
782 1239 7.010923 ACAGCACGATATTCTCATTCTTCTTTC 59.989 37.037 0.00 0.00 0.00 2.62
793 1250 6.204301 TCTCATTCTTCTTTCAGAACTTGCAG 59.796 38.462 0.00 0.00 35.57 4.41
795 1252 6.713903 TCATTCTTCTTTCAGAACTTGCAGAT 59.286 34.615 0.00 0.00 35.57 2.90
796 1253 6.949352 TTCTTCTTTCAGAACTTGCAGATT 57.051 33.333 0.00 0.00 29.89 2.40
801 1258 5.766670 TCTTTCAGAACTTGCAGATTCACAT 59.233 36.000 12.89 0.00 0.00 3.21
802 1259 6.263842 TCTTTCAGAACTTGCAGATTCACATT 59.736 34.615 12.89 0.00 0.00 2.71
803 1260 5.618056 TCAGAACTTGCAGATTCACATTC 57.382 39.130 12.89 0.00 0.00 2.67
804 1261 4.456911 TCAGAACTTGCAGATTCACATTCC 59.543 41.667 12.89 0.00 0.00 3.01
805 1262 4.458295 CAGAACTTGCAGATTCACATTCCT 59.542 41.667 12.89 0.00 0.00 3.36
806 1263 5.048224 CAGAACTTGCAGATTCACATTCCTT 60.048 40.000 12.89 0.00 0.00 3.36
807 1264 4.778534 ACTTGCAGATTCACATTCCTTG 57.221 40.909 0.00 0.00 0.00 3.61
808 1265 4.147321 ACTTGCAGATTCACATTCCTTGT 58.853 39.130 0.00 0.00 39.91 3.16
809 1266 5.316167 ACTTGCAGATTCACATTCCTTGTA 58.684 37.500 0.00 0.00 36.57 2.41
810 1267 5.413833 ACTTGCAGATTCACATTCCTTGTAG 59.586 40.000 0.00 0.00 36.57 2.74
811 1268 4.910195 TGCAGATTCACATTCCTTGTAGT 58.090 39.130 0.00 0.00 36.57 2.73
812 1269 4.696877 TGCAGATTCACATTCCTTGTAGTG 59.303 41.667 0.00 0.00 36.57 2.74
813 1270 4.437930 GCAGATTCACATTCCTTGTAGTGC 60.438 45.833 0.00 0.00 36.57 4.40
814 1271 4.696877 CAGATTCACATTCCTTGTAGTGCA 59.303 41.667 0.00 0.00 36.57 4.57
815 1272 5.181811 CAGATTCACATTCCTTGTAGTGCAA 59.818 40.000 0.00 0.00 36.57 4.08
816 1273 5.769662 AGATTCACATTCCTTGTAGTGCAAA 59.230 36.000 0.00 0.00 36.57 3.68
817 1274 6.435277 AGATTCACATTCCTTGTAGTGCAAAT 59.565 34.615 0.00 0.00 36.57 2.32
818 1275 6.403866 TTCACATTCCTTGTAGTGCAAATT 57.596 33.333 0.00 0.00 36.57 1.82
906 1363 2.779951 TCCGTTCATGCACCGGAGTG 62.780 60.000 9.46 0.00 45.20 3.51
912 1369 3.196207 ATGCACCGGAGTGGCTTGT 62.196 57.895 9.46 0.00 44.69 3.16
913 1370 3.357079 GCACCGGAGTGGCTTGTG 61.357 66.667 9.46 0.00 44.69 3.33
957 1415 4.235939 ACGCATGAACAAAGTAAATGCA 57.764 36.364 0.00 0.00 42.95 3.96
958 1416 4.808558 ACGCATGAACAAAGTAAATGCAT 58.191 34.783 0.00 0.00 42.95 3.96
967 1425 4.332819 ACAAAGTAAATGCATACGAGGCTC 59.667 41.667 3.87 3.87 0.00 4.70
968 1426 3.113260 AGTAAATGCATACGAGGCTCC 57.887 47.619 9.32 0.00 0.00 4.70
969 1427 2.143925 GTAAATGCATACGAGGCTCCC 58.856 52.381 9.32 0.00 0.00 4.30
970 1428 0.839946 AAATGCATACGAGGCTCCCT 59.160 50.000 9.32 0.00 36.03 4.20
1027 1494 3.138304 ACATTGTGCACACATTACGTCT 58.862 40.909 21.56 0.00 41.52 4.18
1035 1502 4.119862 GCACACATTACGTCTATCACCAT 58.880 43.478 0.00 0.00 0.00 3.55
1162 1639 3.998672 GACGACAAGCCGACCCCA 61.999 66.667 0.00 0.00 0.00 4.96
1164 1641 4.003788 CGACAAGCCGACCCCACT 62.004 66.667 0.00 0.00 0.00 4.00
1195 1672 3.918220 GATCGTGCCGCGCTTCTG 61.918 66.667 5.56 0.00 41.07 3.02
1238 1715 1.506718 GACACGACGAGCATCCTGA 59.493 57.895 0.00 0.00 0.00 3.86
1366 1843 0.615331 ACATGAACGGCACCATCTCT 59.385 50.000 0.00 0.00 0.00 3.10
1402 1879 0.323542 TCGAGTTCCTGGAGTCCCTC 60.324 60.000 6.74 4.53 0.00 4.30
1453 1930 2.202892 GTTCCGGACGCCATCTCC 60.203 66.667 1.83 0.00 0.00 3.71
1528 2014 4.760047 CCGGGGAAGGTGCTGTCG 62.760 72.222 0.00 0.00 0.00 4.35
1536 2022 2.266554 GAAGGTGCTGTCGAAGATGAG 58.733 52.381 0.00 0.00 40.67 2.90
1552 2038 2.443016 AGCTCCCTCCGCTACCTG 60.443 66.667 0.00 0.00 35.63 4.00
1862 2351 1.300971 GCTGAGCCGCAACAAGATCA 61.301 55.000 0.00 0.00 0.00 2.92
1898 2387 2.169789 CAGATCGGCAACCTGCTCG 61.170 63.158 0.00 1.41 44.28 5.03
1924 2413 2.826738 AGCTCTCTCGCCCTCGAC 60.827 66.667 0.00 0.00 40.21 4.20
1971 2460 2.280797 GTCACTGTTCGGCCTGCA 60.281 61.111 0.00 0.00 0.00 4.41
2004 2493 1.276421 CCTCGACCTGTCCAAGAACAT 59.724 52.381 0.00 0.00 0.00 2.71
2137 2626 2.424091 CCTAGAGAGGCTGGACATCTCA 60.424 54.545 9.67 0.00 41.58 3.27
2147 2636 1.967779 TGGACATCTCACGGAACAGAA 59.032 47.619 0.00 0.00 0.00 3.02
2161 2650 1.153168 CAGAATCGGGGGCGTCATT 60.153 57.895 0.00 0.00 0.00 2.57
2164 2653 3.415650 AATCGGGGGCGTCATTCCC 62.416 63.158 0.00 0.00 43.15 3.97
2210 2699 2.284995 AGTGGCTGGACCTCTCCC 60.285 66.667 0.00 0.00 37.78 4.30
2247 2736 2.159085 GGAGGATACCGGACAACTTCAG 60.159 54.545 9.46 0.00 37.17 3.02
2301 2790 3.286751 GAACAAGCTGTGCGGGCA 61.287 61.111 0.00 0.00 0.00 5.36
2437 2927 3.291585 CAGTGCTTCGTGTGTCAAAATC 58.708 45.455 0.00 0.00 0.00 2.17
2438 2928 2.942376 AGTGCTTCGTGTGTCAAAATCA 59.058 40.909 0.00 0.00 0.00 2.57
2439 2929 3.376859 AGTGCTTCGTGTGTCAAAATCAA 59.623 39.130 0.00 0.00 0.00 2.57
2440 2930 4.036734 AGTGCTTCGTGTGTCAAAATCAAT 59.963 37.500 0.00 0.00 0.00 2.57
2447 2937 4.118410 GTGTGTCAAAATCAATTGCACCA 58.882 39.130 0.00 0.00 36.94 4.17
2498 2998 8.024865 TGAAAATATGCTTATCATACATGCTGC 58.975 33.333 0.00 0.00 40.22 5.25
2585 3228 5.454966 AGTCCTTTTCCAGTGTAAAATGGT 58.545 37.500 0.00 1.58 37.84 3.55
2608 3251 2.886862 TGGGCACAAGTGTTGAAATG 57.113 45.000 1.79 0.00 0.00 2.32
2609 3252 1.202510 TGGGCACAAGTGTTGAAATGC 60.203 47.619 1.79 0.00 31.60 3.56
2610 3253 1.501169 GGCACAAGTGTTGAAATGCC 58.499 50.000 1.79 4.56 41.25 4.40
2611 3254 1.069049 GGCACAAGTGTTGAAATGCCT 59.931 47.619 10.85 0.00 43.28 4.75
2612 3255 2.129607 GCACAAGTGTTGAAATGCCTG 58.870 47.619 1.79 0.00 0.00 4.85
2613 3256 2.129607 CACAAGTGTTGAAATGCCTGC 58.870 47.619 0.00 0.00 0.00 4.85
2614 3257 1.069049 ACAAGTGTTGAAATGCCTGCC 59.931 47.619 0.00 0.00 0.00 4.85
2615 3258 1.342174 CAAGTGTTGAAATGCCTGCCT 59.658 47.619 0.00 0.00 0.00 4.75
2616 3259 1.251251 AGTGTTGAAATGCCTGCCTC 58.749 50.000 0.00 0.00 0.00 4.70
2617 3260 1.202976 AGTGTTGAAATGCCTGCCTCT 60.203 47.619 0.00 0.00 0.00 3.69
2618 3261 1.200948 GTGTTGAAATGCCTGCCTCTC 59.799 52.381 0.00 0.00 0.00 3.20
2619 3262 1.074405 TGTTGAAATGCCTGCCTCTCT 59.926 47.619 0.00 0.00 0.00 3.10
2620 3263 2.165998 GTTGAAATGCCTGCCTCTCTT 58.834 47.619 0.00 0.00 0.00 2.85
2621 3264 2.119801 TGAAATGCCTGCCTCTCTTC 57.880 50.000 0.00 0.00 0.00 2.87
2622 3265 1.352017 TGAAATGCCTGCCTCTCTTCA 59.648 47.619 0.00 0.00 0.00 3.02
2623 3266 2.025605 TGAAATGCCTGCCTCTCTTCAT 60.026 45.455 0.00 0.00 0.00 2.57
2624 3267 2.345124 AATGCCTGCCTCTCTTCATC 57.655 50.000 0.00 0.00 0.00 2.92
2625 3268 1.210538 ATGCCTGCCTCTCTTCATCA 58.789 50.000 0.00 0.00 0.00 3.07
2626 3269 0.986527 TGCCTGCCTCTCTTCATCAA 59.013 50.000 0.00 0.00 0.00 2.57
2627 3270 1.562942 TGCCTGCCTCTCTTCATCAAT 59.437 47.619 0.00 0.00 0.00 2.57
2628 3271 2.025605 TGCCTGCCTCTCTTCATCAATT 60.026 45.455 0.00 0.00 0.00 2.32
2629 3272 2.617774 GCCTGCCTCTCTTCATCAATTC 59.382 50.000 0.00 0.00 0.00 2.17
2630 3273 2.871022 CCTGCCTCTCTTCATCAATTCG 59.129 50.000 0.00 0.00 0.00 3.34
2631 3274 3.431346 CCTGCCTCTCTTCATCAATTCGA 60.431 47.826 0.00 0.00 0.00 3.71
2632 3275 4.186926 CTGCCTCTCTTCATCAATTCGAA 58.813 43.478 0.00 0.00 0.00 3.71
2633 3276 3.935203 TGCCTCTCTTCATCAATTCGAAC 59.065 43.478 0.00 0.00 0.00 3.95
2634 3277 4.187694 GCCTCTCTTCATCAATTCGAACT 58.812 43.478 0.00 0.00 0.00 3.01
2635 3278 5.105351 TGCCTCTCTTCATCAATTCGAACTA 60.105 40.000 0.00 0.00 0.00 2.24
2636 3279 5.988561 GCCTCTCTTCATCAATTCGAACTAT 59.011 40.000 0.00 0.00 0.00 2.12
2637 3280 6.481644 GCCTCTCTTCATCAATTCGAACTATT 59.518 38.462 0.00 0.00 0.00 1.73
2638 3281 7.011857 GCCTCTCTTCATCAATTCGAACTATTT 59.988 37.037 0.00 0.00 0.00 1.40
2639 3282 8.887717 CCTCTCTTCATCAATTCGAACTATTTT 58.112 33.333 0.00 0.00 0.00 1.82
2711 3360 8.940397 TGAAATACTCTCTTTTCCTTCCAAAT 57.060 30.769 0.00 0.00 32.14 2.32
2715 3364 9.981460 AATACTCTCTTTTCCTTCCAAATATGT 57.019 29.630 0.00 0.00 0.00 2.29
2717 3366 8.794335 ACTCTCTTTTCCTTCCAAATATGTAC 57.206 34.615 0.00 0.00 0.00 2.90
2718 3367 8.606830 ACTCTCTTTTCCTTCCAAATATGTACT 58.393 33.333 0.00 0.00 0.00 2.73
2719 3368 9.103861 CTCTCTTTTCCTTCCAAATATGTACTC 57.896 37.037 0.00 0.00 0.00 2.59
2720 3369 8.047310 TCTCTTTTCCTTCCAAATATGTACTCC 58.953 37.037 0.00 0.00 0.00 3.85
2721 3370 7.116736 TCTTTTCCTTCCAAATATGTACTCCC 58.883 38.462 0.00 0.00 0.00 4.30
2722 3371 6.652205 TTTCCTTCCAAATATGTACTCCCT 57.348 37.500 0.00 0.00 0.00 4.20
2723 3372 5.888982 TCCTTCCAAATATGTACTCCCTC 57.111 43.478 0.00 0.00 0.00 4.30
2724 3373 4.658901 TCCTTCCAAATATGTACTCCCTCC 59.341 45.833 0.00 0.00 0.00 4.30
2725 3374 4.503296 CCTTCCAAATATGTACTCCCTCCG 60.503 50.000 0.00 0.00 0.00 4.63
2726 3375 3.649843 TCCAAATATGTACTCCCTCCGT 58.350 45.455 0.00 0.00 0.00 4.69
2727 3376 4.035112 TCCAAATATGTACTCCCTCCGTT 58.965 43.478 0.00 0.00 0.00 4.44
2728 3377 4.100498 TCCAAATATGTACTCCCTCCGTTC 59.900 45.833 0.00 0.00 0.00 3.95
2729 3378 4.377897 CAAATATGTACTCCCTCCGTTCC 58.622 47.826 0.00 0.00 0.00 3.62
2730 3379 2.832643 TATGTACTCCCTCCGTTCCA 57.167 50.000 0.00 0.00 0.00 3.53
2731 3380 1.946984 ATGTACTCCCTCCGTTCCAA 58.053 50.000 0.00 0.00 0.00 3.53
2732 3381 1.719529 TGTACTCCCTCCGTTCCAAA 58.280 50.000 0.00 0.00 0.00 3.28
2733 3382 2.262637 TGTACTCCCTCCGTTCCAAAT 58.737 47.619 0.00 0.00 0.00 2.32
2734 3383 2.640826 TGTACTCCCTCCGTTCCAAATT 59.359 45.455 0.00 0.00 0.00 1.82
2735 3384 3.839490 TGTACTCCCTCCGTTCCAAATTA 59.161 43.478 0.00 0.00 0.00 1.40
2736 3385 3.345508 ACTCCCTCCGTTCCAAATTAC 57.654 47.619 0.00 0.00 0.00 1.89
2737 3386 2.910977 ACTCCCTCCGTTCCAAATTACT 59.089 45.455 0.00 0.00 0.00 2.24
2738 3387 3.329814 ACTCCCTCCGTTCCAAATTACTT 59.670 43.478 0.00 0.00 0.00 2.24
2739 3388 3.681593 TCCCTCCGTTCCAAATTACTTG 58.318 45.455 0.00 0.00 34.52 3.16
2740 3389 3.073356 TCCCTCCGTTCCAAATTACTTGT 59.927 43.478 0.00 0.00 32.65 3.16
2741 3390 3.439129 CCCTCCGTTCCAAATTACTTGTC 59.561 47.826 0.00 0.00 32.65 3.18
2742 3391 3.124636 CCTCCGTTCCAAATTACTTGTCG 59.875 47.826 0.00 0.00 32.65 4.35
2743 3392 2.481185 TCCGTTCCAAATTACTTGTCGC 59.519 45.455 0.00 0.00 32.65 5.19
2744 3393 2.224549 CCGTTCCAAATTACTTGTCGCA 59.775 45.455 0.00 0.00 32.65 5.10
2745 3394 3.479006 CGTTCCAAATTACTTGTCGCAG 58.521 45.455 0.00 0.00 32.65 5.18
2746 3395 3.185594 CGTTCCAAATTACTTGTCGCAGA 59.814 43.478 0.00 0.00 32.65 4.26
2747 3396 4.319190 CGTTCCAAATTACTTGTCGCAGAA 60.319 41.667 0.00 0.00 39.69 3.02
2748 3397 5.516090 GTTCCAAATTACTTGTCGCAGAAA 58.484 37.500 0.00 0.00 39.69 2.52
2749 3398 5.957842 TCCAAATTACTTGTCGCAGAAAT 57.042 34.783 0.00 0.00 39.69 2.17
2750 3399 5.698832 TCCAAATTACTTGTCGCAGAAATG 58.301 37.500 0.00 0.00 39.69 2.32
2751 3400 4.858692 CCAAATTACTTGTCGCAGAAATGG 59.141 41.667 0.00 0.00 39.69 3.16
2752 3401 5.335583 CCAAATTACTTGTCGCAGAAATGGA 60.336 40.000 0.00 0.00 39.69 3.41
2753 3402 6.324819 CAAATTACTTGTCGCAGAAATGGAT 58.675 36.000 0.00 0.00 39.69 3.41
2754 3403 4.944962 TTACTTGTCGCAGAAATGGATG 57.055 40.909 0.00 0.00 39.69 3.51
2755 3404 2.783135 ACTTGTCGCAGAAATGGATGT 58.217 42.857 0.00 0.00 39.69 3.06
2756 3405 3.937814 ACTTGTCGCAGAAATGGATGTA 58.062 40.909 0.00 0.00 39.69 2.29
2757 3406 4.517285 ACTTGTCGCAGAAATGGATGTAT 58.483 39.130 0.00 0.00 39.69 2.29
2758 3407 4.572389 ACTTGTCGCAGAAATGGATGTATC 59.428 41.667 0.00 0.00 39.69 2.24
2759 3408 4.406648 TGTCGCAGAAATGGATGTATCT 57.593 40.909 0.00 0.00 39.69 1.98
2760 3409 5.529581 TGTCGCAGAAATGGATGTATCTA 57.470 39.130 0.00 0.00 39.69 1.98
2761 3410 5.532557 TGTCGCAGAAATGGATGTATCTAG 58.467 41.667 0.00 0.00 39.69 2.43
2762 3411 5.301805 TGTCGCAGAAATGGATGTATCTAGA 59.698 40.000 0.00 0.00 39.69 2.43
2763 3412 6.183360 TGTCGCAGAAATGGATGTATCTAGAA 60.183 38.462 0.00 0.00 39.69 2.10
2764 3413 6.144724 GTCGCAGAAATGGATGTATCTAGAAC 59.855 42.308 0.00 0.00 39.69 3.01
2765 3414 6.040955 TCGCAGAAATGGATGTATCTAGAACT 59.959 38.462 0.00 0.00 0.00 3.01
2766 3415 7.230712 TCGCAGAAATGGATGTATCTAGAACTA 59.769 37.037 0.00 0.00 0.00 2.24
2767 3416 7.867909 CGCAGAAATGGATGTATCTAGAACTAA 59.132 37.037 0.00 0.00 0.00 2.24
2768 3417 9.547753 GCAGAAATGGATGTATCTAGAACTAAA 57.452 33.333 0.00 0.00 0.00 1.85
2807 3456 5.824429 TCCATACCTACGACAAGTAATTCG 58.176 41.667 0.00 0.00 41.14 3.34
2808 3457 4.980434 CCATACCTACGACAAGTAATTCGG 59.020 45.833 0.00 0.00 39.63 4.30
2809 3458 5.221106 CCATACCTACGACAAGTAATTCGGA 60.221 44.000 0.00 0.00 39.63 4.55
2810 3459 4.789012 ACCTACGACAAGTAATTCGGAA 57.211 40.909 0.00 0.00 39.63 4.30
2811 3460 4.741342 ACCTACGACAAGTAATTCGGAAG 58.259 43.478 0.00 0.00 39.63 3.46
2812 3461 4.110482 CCTACGACAAGTAATTCGGAAGG 58.890 47.826 0.00 0.00 39.63 3.46
2813 3462 2.968675 ACGACAAGTAATTCGGAAGGG 58.031 47.619 0.00 0.00 39.63 3.95
2814 3463 2.564062 ACGACAAGTAATTCGGAAGGGA 59.436 45.455 0.00 0.00 39.63 4.20
2815 3464 3.187700 CGACAAGTAATTCGGAAGGGAG 58.812 50.000 0.00 0.00 0.00 4.30
2816 3465 3.532542 GACAAGTAATTCGGAAGGGAGG 58.467 50.000 0.00 0.00 0.00 4.30
2817 3466 2.238898 ACAAGTAATTCGGAAGGGAGGG 59.761 50.000 0.00 0.00 0.00 4.30
2818 3467 2.504175 CAAGTAATTCGGAAGGGAGGGA 59.496 50.000 0.00 0.00 0.00 4.20
2819 3468 2.399580 AGTAATTCGGAAGGGAGGGAG 58.600 52.381 0.00 0.00 0.00 4.30
2845 3494 3.827008 TGGATGCCAGAGTTGTAGATC 57.173 47.619 0.00 0.00 0.00 2.75
2846 3495 2.101415 TGGATGCCAGAGTTGTAGATCG 59.899 50.000 0.00 0.00 0.00 3.69
2919 3573 7.451255 ACAGAACCTATGGTCATTGAAATTGAA 59.549 33.333 0.00 0.00 33.12 2.69
2946 3600 7.170320 CCCAAATTCAACAACTCTTCAATGAAG 59.830 37.037 16.39 16.39 40.65 3.02
2972 3626 5.971763 AGAGTTCCATGACATGAAGTAGAC 58.028 41.667 17.24 5.99 0.00 2.59
2975 3629 6.533730 AGTTCCATGACATGAAGTAGACAAA 58.466 36.000 17.24 0.00 0.00 2.83
2976 3630 6.428159 AGTTCCATGACATGAAGTAGACAAAC 59.572 38.462 17.24 6.72 0.00 2.93
2977 3631 5.863965 TCCATGACATGAAGTAGACAAACA 58.136 37.500 17.24 0.00 0.00 2.83
2990 3644 3.214328 AGACAAACAGCGAACCTTCAAT 58.786 40.909 0.00 0.00 0.00 2.57
2992 3646 2.948979 ACAAACAGCGAACCTTCAATGA 59.051 40.909 0.00 0.00 0.00 2.57
2996 3650 4.853924 ACAGCGAACCTTCAATGAAAAT 57.146 36.364 0.00 0.00 0.00 1.82
3010 3664 9.426837 CTTCAATGAAAATGCAGAAGGAAATAA 57.573 29.630 0.00 0.00 31.36 1.40
3016 3670 7.660617 TGAAAATGCAGAAGGAAATAAAATGCA 59.339 29.630 0.00 0.00 45.22 3.96
3031 3685 4.778534 AAATGCACAAATGAGGTCTGAG 57.221 40.909 0.00 0.00 0.00 3.35
3034 3688 3.141398 TGCACAAATGAGGTCTGAGTTC 58.859 45.455 0.00 0.00 0.00 3.01
3094 5448 5.480205 GCCCATGTACTAATAAGCCTAGTC 58.520 45.833 0.00 0.00 31.98 2.59
3124 5478 2.578495 CATCGTGAAACTTTGCTCTGC 58.422 47.619 0.00 0.00 31.75 4.26
3130 5484 2.880890 TGAAACTTTGCTCTGCTTCTCC 59.119 45.455 0.00 0.00 0.00 3.71
3155 5509 6.670695 AGGTTCCTGAATTTTATTGTGCTT 57.329 33.333 0.00 0.00 0.00 3.91
3156 5510 6.458210 AGGTTCCTGAATTTTATTGTGCTTG 58.542 36.000 0.00 0.00 0.00 4.01
3158 5512 5.726980 TCCTGAATTTTATTGTGCTTGCT 57.273 34.783 0.00 0.00 0.00 3.91
3159 5513 6.100404 TCCTGAATTTTATTGTGCTTGCTT 57.900 33.333 0.00 0.00 0.00 3.91
3160 5514 5.927689 TCCTGAATTTTATTGTGCTTGCTTG 59.072 36.000 0.00 0.00 0.00 4.01
3161 5515 5.927689 CCTGAATTTTATTGTGCTTGCTTGA 59.072 36.000 0.00 0.00 0.00 3.02
3164 5518 6.930164 TGAATTTTATTGTGCTTGCTTGATGT 59.070 30.769 0.00 0.00 0.00 3.06
3165 5519 6.715344 ATTTTATTGTGCTTGCTTGATGTG 57.285 33.333 0.00 0.00 0.00 3.21
3166 5520 2.736144 ATTGTGCTTGCTTGATGTGG 57.264 45.000 0.00 0.00 0.00 4.17
3167 5521 1.689984 TTGTGCTTGCTTGATGTGGA 58.310 45.000 0.00 0.00 0.00 4.02
3168 5522 1.241165 TGTGCTTGCTTGATGTGGAG 58.759 50.000 0.00 0.00 0.00 3.86
3169 5523 1.202794 TGTGCTTGCTTGATGTGGAGA 60.203 47.619 0.00 0.00 0.00 3.71
3170 5524 1.881973 GTGCTTGCTTGATGTGGAGAA 59.118 47.619 0.00 0.00 0.00 2.87
3171 5525 2.294233 GTGCTTGCTTGATGTGGAGAAA 59.706 45.455 0.00 0.00 0.00 2.52
3172 5526 2.957680 TGCTTGCTTGATGTGGAGAAAA 59.042 40.909 0.00 0.00 0.00 2.29
3173 5527 3.005050 TGCTTGCTTGATGTGGAGAAAAG 59.995 43.478 0.00 0.00 0.00 2.27
3174 5528 3.254166 GCTTGCTTGATGTGGAGAAAAGA 59.746 43.478 0.00 0.00 0.00 2.52
3175 5529 4.791974 CTTGCTTGATGTGGAGAAAAGAC 58.208 43.478 0.00 0.00 0.00 3.01
3176 5530 3.819368 TGCTTGATGTGGAGAAAAGACA 58.181 40.909 0.00 0.00 0.00 3.41
3177 5531 3.817084 TGCTTGATGTGGAGAAAAGACAG 59.183 43.478 0.00 0.00 0.00 3.51
3178 5532 3.190118 GCTTGATGTGGAGAAAAGACAGG 59.810 47.826 0.00 0.00 0.00 4.00
3179 5533 4.392940 CTTGATGTGGAGAAAAGACAGGT 58.607 43.478 0.00 0.00 0.00 4.00
3180 5534 3.743521 TGATGTGGAGAAAAGACAGGTG 58.256 45.455 0.00 0.00 0.00 4.00
3181 5535 2.638480 TGTGGAGAAAAGACAGGTGG 57.362 50.000 0.00 0.00 0.00 4.61
3182 5536 1.239347 GTGGAGAAAAGACAGGTGGC 58.761 55.000 0.00 0.00 0.00 5.01
3183 5537 0.110486 TGGAGAAAAGACAGGTGGCC 59.890 55.000 0.00 0.00 0.00 5.36
3184 5538 0.110486 GGAGAAAAGACAGGTGGCCA 59.890 55.000 0.00 0.00 0.00 5.36
3185 5539 1.528129 GAGAAAAGACAGGTGGCCAG 58.472 55.000 5.11 0.00 0.00 4.85
3186 5540 1.072331 GAGAAAAGACAGGTGGCCAGA 59.928 52.381 5.11 0.00 0.00 3.86
3187 5541 1.202818 AGAAAAGACAGGTGGCCAGAC 60.203 52.381 5.11 1.34 0.00 3.51
3188 5542 0.178990 AAAAGACAGGTGGCCAGACC 60.179 55.000 5.11 4.52 39.84 3.85
3205 5559 4.442706 CAGACCATGGTAACTGGATACAC 58.557 47.826 19.80 0.00 46.17 2.90
3206 5560 3.132289 AGACCATGGTAACTGGATACACG 59.868 47.826 19.80 0.00 46.17 4.49
3207 5561 3.101437 ACCATGGTAACTGGATACACGA 58.899 45.455 18.10 0.00 46.17 4.35
3208 5562 3.132289 ACCATGGTAACTGGATACACGAG 59.868 47.826 18.10 0.00 46.17 4.18
3209 5563 3.492656 CCATGGTAACTGGATACACGAGG 60.493 52.174 2.57 0.00 46.17 4.63
3210 5564 3.090210 TGGTAACTGGATACACGAGGA 57.910 47.619 0.00 0.00 46.17 3.71
3211 5565 3.638860 TGGTAACTGGATACACGAGGAT 58.361 45.455 0.00 0.00 46.17 3.24
3212 5566 3.383505 TGGTAACTGGATACACGAGGATG 59.616 47.826 0.00 0.00 46.17 3.51
3213 5567 3.635373 GGTAACTGGATACACGAGGATGA 59.365 47.826 0.00 0.00 46.17 2.92
3214 5568 4.261656 GGTAACTGGATACACGAGGATGAG 60.262 50.000 0.00 0.00 46.17 2.90
3215 5569 3.019799 ACTGGATACACGAGGATGAGT 57.980 47.619 0.00 0.00 46.17 3.41
3216 5570 3.366396 ACTGGATACACGAGGATGAGTT 58.634 45.455 0.00 0.00 46.17 3.01
3217 5571 3.381908 ACTGGATACACGAGGATGAGTTC 59.618 47.826 0.00 0.00 46.17 3.01
3218 5572 3.361786 TGGATACACGAGGATGAGTTCA 58.638 45.455 0.00 0.00 46.17 3.18
3219 5573 3.960755 TGGATACACGAGGATGAGTTCAT 59.039 43.478 0.00 0.00 46.17 2.57
3220 5574 4.038042 TGGATACACGAGGATGAGTTCATC 59.962 45.833 12.61 12.61 46.77 2.92
3229 5583 1.324736 GATGAGTTCATCGTTGTCCGC 59.675 52.381 6.38 0.00 42.66 5.54
3230 5584 0.669318 TGAGTTCATCGTTGTCCGCC 60.669 55.000 0.00 0.00 36.19 6.13
3231 5585 0.669318 GAGTTCATCGTTGTCCGCCA 60.669 55.000 0.00 0.00 36.19 5.69
3232 5586 0.250124 AGTTCATCGTTGTCCGCCAA 60.250 50.000 0.00 0.00 36.19 4.52
3233 5587 0.165944 GTTCATCGTTGTCCGCCAAG 59.834 55.000 0.00 0.00 36.19 3.61
3234 5588 0.034198 TTCATCGTTGTCCGCCAAGA 59.966 50.000 0.00 0.00 36.19 3.02
3235 5589 0.249120 TCATCGTTGTCCGCCAAGAT 59.751 50.000 0.00 0.00 36.19 2.40
3236 5590 0.374758 CATCGTTGTCCGCCAAGATG 59.625 55.000 9.09 9.09 34.94 2.90
3237 5591 0.036388 ATCGTTGTCCGCCAAGATGT 60.036 50.000 0.00 0.00 36.19 3.06
3238 5592 0.604073 TCGTTGTCCGCCAAGATGTA 59.396 50.000 0.00 0.00 36.19 2.29
3239 5593 1.001068 TCGTTGTCCGCCAAGATGTAA 59.999 47.619 0.00 0.00 36.19 2.41
3240 5594 1.393539 CGTTGTCCGCCAAGATGTAAG 59.606 52.381 0.00 0.00 32.51 2.34
3241 5595 2.695359 GTTGTCCGCCAAGATGTAAGA 58.305 47.619 0.00 0.00 32.51 2.10
3242 5596 3.071479 GTTGTCCGCCAAGATGTAAGAA 58.929 45.455 0.00 0.00 32.51 2.52
3243 5597 3.627395 TGTCCGCCAAGATGTAAGAAT 57.373 42.857 0.00 0.00 0.00 2.40
3244 5598 3.270027 TGTCCGCCAAGATGTAAGAATG 58.730 45.455 0.00 0.00 0.00 2.67
3245 5599 2.032178 GTCCGCCAAGATGTAAGAATGC 59.968 50.000 0.00 0.00 0.00 3.56
3246 5600 1.003545 CCGCCAAGATGTAAGAATGCG 60.004 52.381 0.00 0.00 40.38 4.73
3247 5601 1.003545 CGCCAAGATGTAAGAATGCGG 60.004 52.381 0.00 0.00 37.33 5.69
3248 5602 1.334869 GCCAAGATGTAAGAATGCGGG 59.665 52.381 0.00 0.00 0.00 6.13
3249 5603 2.917933 CCAAGATGTAAGAATGCGGGA 58.082 47.619 0.00 0.00 0.00 5.14
3250 5604 2.614057 CCAAGATGTAAGAATGCGGGAC 59.386 50.000 0.00 0.00 0.00 4.46
3251 5605 3.535561 CAAGATGTAAGAATGCGGGACT 58.464 45.455 0.00 0.00 0.00 3.85
3252 5606 3.460857 AGATGTAAGAATGCGGGACTC 57.539 47.619 0.00 0.00 0.00 3.36
3253 5607 2.103263 AGATGTAAGAATGCGGGACTCC 59.897 50.000 0.00 0.00 0.00 3.85
3254 5608 1.271856 TGTAAGAATGCGGGACTCCA 58.728 50.000 0.00 0.00 0.00 3.86
3255 5609 1.837439 TGTAAGAATGCGGGACTCCAT 59.163 47.619 0.00 0.00 0.00 3.41
3256 5610 2.158957 TGTAAGAATGCGGGACTCCATC 60.159 50.000 0.00 0.00 0.00 3.51
3274 5628 3.987638 CCCCCTCCCGCTCTTTAT 58.012 61.111 0.00 0.00 0.00 1.40
3275 5629 3.159141 CCCCCTCCCGCTCTTTATA 57.841 57.895 0.00 0.00 0.00 0.98
3276 5630 1.430992 CCCCCTCCCGCTCTTTATAA 58.569 55.000 0.00 0.00 0.00 0.98
3277 5631 1.772453 CCCCCTCCCGCTCTTTATAAA 59.228 52.381 0.00 0.00 0.00 1.40
3278 5632 2.224548 CCCCCTCCCGCTCTTTATAAAG 60.225 54.545 17.60 17.60 37.36 1.85
3279 5633 2.224548 CCCCTCCCGCTCTTTATAAAGG 60.225 54.545 22.11 14.76 36.67 3.11
3280 5634 2.704065 CCCTCCCGCTCTTTATAAAGGA 59.296 50.000 22.11 12.64 36.67 3.36
3281 5635 3.135895 CCCTCCCGCTCTTTATAAAGGAA 59.864 47.826 22.11 6.00 36.67 3.36
3282 5636 4.127907 CCTCCCGCTCTTTATAAAGGAAC 58.872 47.826 22.11 12.31 36.67 3.62
3283 5637 3.788937 TCCCGCTCTTTATAAAGGAACG 58.211 45.455 22.11 20.64 36.67 3.95
3284 5638 2.870411 CCCGCTCTTTATAAAGGAACGG 59.130 50.000 28.61 28.61 41.44 4.44
3285 5639 2.870411 CCGCTCTTTATAAAGGAACGGG 59.130 50.000 28.25 19.95 39.83 5.28
3286 5640 2.870411 CGCTCTTTATAAAGGAACGGGG 59.130 50.000 22.11 12.66 36.67 5.73
3287 5641 3.680754 CGCTCTTTATAAAGGAACGGGGT 60.681 47.826 22.11 0.00 36.67 4.95
3288 5642 4.267536 GCTCTTTATAAAGGAACGGGGTT 58.732 43.478 22.11 0.00 36.67 4.11
3289 5643 4.095932 GCTCTTTATAAAGGAACGGGGTTG 59.904 45.833 22.11 0.00 36.67 3.77
3290 5644 4.591929 TCTTTATAAAGGAACGGGGTTGG 58.408 43.478 22.11 0.00 36.67 3.77
3291 5645 3.369242 TTATAAAGGAACGGGGTTGGG 57.631 47.619 0.00 0.00 0.00 4.12
3292 5646 0.333652 ATAAAGGAACGGGGTTGGGG 59.666 55.000 0.00 0.00 0.00 4.96
3293 5647 2.429235 TAAAGGAACGGGGTTGGGGC 62.429 60.000 0.00 0.00 0.00 5.80
3295 5649 4.735358 GGAACGGGGTTGGGGCTC 62.735 72.222 0.00 0.00 0.00 4.70
3296 5650 3.961414 GAACGGGGTTGGGGCTCA 61.961 66.667 0.00 0.00 0.00 4.26
3297 5651 3.920093 GAACGGGGTTGGGGCTCAG 62.920 68.421 0.00 0.00 0.00 3.35
3316 5670 4.545706 CGCCCCGCTCTGCCAATA 62.546 66.667 0.00 0.00 0.00 1.90
3317 5671 2.124320 GCCCCGCTCTGCCAATAA 60.124 61.111 0.00 0.00 0.00 1.40
3318 5672 1.752694 GCCCCGCTCTGCCAATAAA 60.753 57.895 0.00 0.00 0.00 1.40
3319 5673 1.728490 GCCCCGCTCTGCCAATAAAG 61.728 60.000 0.00 0.00 0.00 1.85
3320 5674 0.107214 CCCCGCTCTGCCAATAAAGA 60.107 55.000 0.00 0.00 0.00 2.52
3321 5675 1.017387 CCCGCTCTGCCAATAAAGAC 58.983 55.000 0.00 0.00 0.00 3.01
3322 5676 0.652592 CCGCTCTGCCAATAAAGACG 59.347 55.000 0.00 0.00 0.00 4.18
3323 5677 0.026803 CGCTCTGCCAATAAAGACGC 59.973 55.000 0.00 0.00 0.00 5.19
3324 5678 0.026803 GCTCTGCCAATAAAGACGCG 59.973 55.000 3.53 3.53 0.00 6.01
3325 5679 0.652592 CTCTGCCAATAAAGACGCGG 59.347 55.000 12.47 0.00 0.00 6.46
3326 5680 0.248012 TCTGCCAATAAAGACGCGGA 59.752 50.000 12.47 0.00 34.31 5.54
3327 5681 1.083489 CTGCCAATAAAGACGCGGAA 58.917 50.000 12.47 0.00 0.00 4.30
3328 5682 1.062587 CTGCCAATAAAGACGCGGAAG 59.937 52.381 12.47 0.00 0.00 3.46
3329 5683 0.377203 GCCAATAAAGACGCGGAAGG 59.623 55.000 12.47 1.50 0.00 3.46
3330 5684 0.377203 CCAATAAAGACGCGGAAGGC 59.623 55.000 12.47 0.00 38.69 4.35
3393 5747 4.324991 GTTTCCCGCCTCCACCGT 62.325 66.667 0.00 0.00 0.00 4.83
3394 5748 3.562232 TTTCCCGCCTCCACCGTT 61.562 61.111 0.00 0.00 0.00 4.44
3395 5749 3.122727 TTTCCCGCCTCCACCGTTT 62.123 57.895 0.00 0.00 0.00 3.60
3396 5750 3.835790 TTCCCGCCTCCACCGTTTG 62.836 63.158 0.00 0.00 0.00 2.93
3400 5754 3.670377 GCCTCCACCGTTTGCCAC 61.670 66.667 0.00 0.00 0.00 5.01
3401 5755 2.983592 CCTCCACCGTTTGCCACC 60.984 66.667 0.00 0.00 0.00 4.61
3402 5756 2.983592 CTCCACCGTTTGCCACCC 60.984 66.667 0.00 0.00 0.00 4.61
3403 5757 4.589675 TCCACCGTTTGCCACCCC 62.590 66.667 0.00 0.00 0.00 4.95
3404 5758 4.904590 CCACCGTTTGCCACCCCA 62.905 66.667 0.00 0.00 0.00 4.96
3405 5759 2.835431 CACCGTTTGCCACCCCAA 60.835 61.111 0.00 0.00 0.00 4.12
3406 5760 2.520741 ACCGTTTGCCACCCCAAG 60.521 61.111 0.00 0.00 0.00 3.61
3407 5761 3.989787 CCGTTTGCCACCCCAAGC 61.990 66.667 0.00 0.00 0.00 4.01
3408 5762 4.341502 CGTTTGCCACCCCAAGCG 62.342 66.667 0.00 0.00 41.57 4.68
3409 5763 4.662961 GTTTGCCACCCCAAGCGC 62.663 66.667 0.00 0.00 0.00 5.92
3411 5765 4.992740 TTGCCACCCCAAGCGCAT 62.993 61.111 11.47 0.00 0.00 4.73
3414 5768 4.738998 CCACCCCAAGCGCATGGA 62.739 66.667 32.05 0.00 43.54 3.41
3415 5769 2.676121 CACCCCAAGCGCATGGAA 60.676 61.111 32.05 0.00 43.54 3.53
3416 5770 2.361610 ACCCCAAGCGCATGGAAG 60.362 61.111 32.05 23.56 43.54 3.46
3417 5771 2.045045 CCCCAAGCGCATGGAAGA 60.045 61.111 32.05 0.00 43.54 2.87
3418 5772 2.409870 CCCCAAGCGCATGGAAGAC 61.410 63.158 32.05 0.00 43.54 3.01
3419 5773 1.675310 CCCAAGCGCATGGAAGACA 60.675 57.895 32.05 0.00 43.54 3.41
3420 5774 1.033746 CCCAAGCGCATGGAAGACAT 61.034 55.000 32.05 0.00 43.54 3.06
3427 5781 4.643795 ATGGAAGACATGTGGCGG 57.356 55.556 1.15 0.00 38.70 6.13
3428 5782 1.990424 ATGGAAGACATGTGGCGGA 59.010 52.632 1.15 0.00 38.70 5.54
3429 5783 0.392998 ATGGAAGACATGTGGCGGAC 60.393 55.000 1.15 0.00 38.70 4.79
3430 5784 2.100631 GGAAGACATGTGGCGGACG 61.101 63.158 1.15 0.00 0.00 4.79
3431 5785 1.374252 GAAGACATGTGGCGGACGT 60.374 57.895 1.15 0.00 0.00 4.34
3432 5786 1.626654 GAAGACATGTGGCGGACGTG 61.627 60.000 1.15 5.40 45.83 4.49
3433 5787 3.788766 GACATGTGGCGGACGTGC 61.789 66.667 1.15 0.00 44.43 5.34
3434 5788 4.617520 ACATGTGGCGGACGTGCA 62.618 61.111 8.11 0.00 44.43 4.57
3435 5789 3.792047 CATGTGGCGGACGTGCAG 61.792 66.667 8.11 0.94 34.78 4.41
3436 5790 4.002506 ATGTGGCGGACGTGCAGA 62.003 61.111 8.11 0.00 36.28 4.26
3437 5791 3.529341 ATGTGGCGGACGTGCAGAA 62.529 57.895 8.11 0.00 36.28 3.02
3438 5792 3.712881 GTGGCGGACGTGCAGAAC 61.713 66.667 8.11 0.00 36.28 3.01
3439 5793 4.980805 TGGCGGACGTGCAGAACC 62.981 66.667 8.11 3.14 36.28 3.62
3442 5796 2.805353 CGGACGTGCAGAACCGAG 60.805 66.667 16.88 0.00 42.18 4.63
3443 5797 2.432628 GGACGTGCAGAACCGAGG 60.433 66.667 0.63 0.00 0.00 4.63
3444 5798 2.432628 GACGTGCAGAACCGAGGG 60.433 66.667 0.00 0.00 0.00 4.30
3445 5799 3.934391 GACGTGCAGAACCGAGGGG 62.934 68.421 0.00 0.00 40.11 4.79
3446 5800 3.691342 CGTGCAGAACCGAGGGGA 61.691 66.667 0.00 0.00 36.97 4.81
3447 5801 2.047179 GTGCAGAACCGAGGGGAC 60.047 66.667 0.00 0.00 36.97 4.46
3448 5802 3.691342 TGCAGAACCGAGGGGACG 61.691 66.667 0.00 0.00 36.97 4.79
3469 5823 3.622514 GAGGCGACCTCTCACCAT 58.377 61.111 15.90 0.00 46.41 3.55
3470 5824 1.439644 GAGGCGACCTCTCACCATC 59.560 63.158 15.90 0.00 46.41 3.51
3471 5825 2.022240 GAGGCGACCTCTCACCATCC 62.022 65.000 15.90 0.00 46.41 3.51
3472 5826 2.501610 GCGACCTCTCACCATCCC 59.498 66.667 0.00 0.00 0.00 3.85
3473 5827 2.808315 CGACCTCTCACCATCCCG 59.192 66.667 0.00 0.00 0.00 5.14
3474 5828 2.052690 CGACCTCTCACCATCCCGT 61.053 63.158 0.00 0.00 0.00 5.28
3475 5829 1.517832 GACCTCTCACCATCCCGTG 59.482 63.158 0.00 0.00 34.93 4.94
3476 5830 0.970937 GACCTCTCACCATCCCGTGA 60.971 60.000 0.00 0.00 40.44 4.35
3477 5831 0.325671 ACCTCTCACCATCCCGTGAT 60.326 55.000 0.00 0.00 41.78 3.06
3478 5832 0.390860 CCTCTCACCATCCCGTGATC 59.609 60.000 0.00 0.00 41.78 2.92
3479 5833 0.031314 CTCTCACCATCCCGTGATCG 59.969 60.000 0.00 0.00 41.78 3.69
3480 5834 0.683179 TCTCACCATCCCGTGATCGT 60.683 55.000 0.00 0.00 41.78 3.73
3481 5835 0.528466 CTCACCATCCCGTGATCGTG 60.528 60.000 0.00 0.00 41.78 4.35
3482 5836 1.521457 CACCATCCCGTGATCGTGG 60.521 63.158 0.00 0.00 36.71 4.94
3484 5838 2.108976 CATCCCGTGATCGTGGGG 59.891 66.667 19.08 14.10 46.03 4.96
3486 5840 2.758327 TCCCGTGATCGTGGGGAG 60.758 66.667 19.08 0.00 44.99 4.30
3487 5841 3.075005 CCCGTGATCGTGGGGAGT 61.075 66.667 13.13 0.00 44.10 3.85
3488 5842 2.184322 CCGTGATCGTGGGGAGTG 59.816 66.667 0.00 0.00 35.01 3.51
3489 5843 2.184322 CGTGATCGTGGGGAGTGG 59.816 66.667 0.00 0.00 0.00 4.00
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 0.815615 CAGCAAGTTATCGAGCCCCC 60.816 60.000 0.00 0.00 0.00 5.40
79 80 0.179108 CTTAGGTGTGTAGCTCGGGC 60.179 60.000 0.00 0.00 35.90 6.13
105 106 3.647590 AGGCAACAAAAATTCATCCAGGT 59.352 39.130 0.00 0.00 41.41 4.00
125 132 2.421424 ACGACCAGCTAAACGTACTAGG 59.579 50.000 8.96 0.00 37.22 3.02
132 139 1.214367 ACAACACGACCAGCTAAACG 58.786 50.000 0.00 0.00 0.00 3.60
184 194 0.392193 CTGGAGCCAACAGGTGCTAG 60.392 60.000 0.00 0.00 38.11 3.42
293 303 4.393062 AGACAATTCCATAGCTGAACAACG 59.607 41.667 0.00 0.00 0.00 4.10
295 305 5.316167 ACAGACAATTCCATAGCTGAACAA 58.684 37.500 0.00 0.00 0.00 2.83
327 337 4.474651 TCTCCCTAAATCCAGATTGCAAGA 59.525 41.667 4.94 0.00 0.00 3.02
345 355 6.149474 CACCGTTTTCCATATGATATTCTCCC 59.851 42.308 3.65 0.00 0.00 4.30
346 356 6.149474 CCACCGTTTTCCATATGATATTCTCC 59.851 42.308 3.65 0.00 0.00 3.71
347 357 6.934645 TCCACCGTTTTCCATATGATATTCTC 59.065 38.462 3.65 0.00 0.00 2.87
348 358 6.837312 TCCACCGTTTTCCATATGATATTCT 58.163 36.000 3.65 0.00 0.00 2.40
349 359 6.934645 TCTCCACCGTTTTCCATATGATATTC 59.065 38.462 3.65 0.00 0.00 1.75
350 360 6.837312 TCTCCACCGTTTTCCATATGATATT 58.163 36.000 3.65 0.00 0.00 1.28
351 361 6.043243 ACTCTCCACCGTTTTCCATATGATAT 59.957 38.462 3.65 0.00 0.00 1.63
352 362 5.365605 ACTCTCCACCGTTTTCCATATGATA 59.634 40.000 3.65 0.00 0.00 2.15
353 363 4.164221 ACTCTCCACCGTTTTCCATATGAT 59.836 41.667 3.65 0.00 0.00 2.45
354 364 3.517901 ACTCTCCACCGTTTTCCATATGA 59.482 43.478 3.65 0.00 0.00 2.15
355 365 3.623060 CACTCTCCACCGTTTTCCATATG 59.377 47.826 0.00 0.00 0.00 1.78
356 366 3.370527 CCACTCTCCACCGTTTTCCATAT 60.371 47.826 0.00 0.00 0.00 1.78
357 367 2.027561 CCACTCTCCACCGTTTTCCATA 60.028 50.000 0.00 0.00 0.00 2.74
358 368 1.271379 CCACTCTCCACCGTTTTCCAT 60.271 52.381 0.00 0.00 0.00 3.41
359 369 0.107831 CCACTCTCCACCGTTTTCCA 59.892 55.000 0.00 0.00 0.00 3.53
360 370 0.108019 ACCACTCTCCACCGTTTTCC 59.892 55.000 0.00 0.00 0.00 3.13
361 371 1.202604 TCACCACTCTCCACCGTTTTC 60.203 52.381 0.00 0.00 0.00 2.29
362 372 0.834612 TCACCACTCTCCACCGTTTT 59.165 50.000 0.00 0.00 0.00 2.43
363 373 0.834612 TTCACCACTCTCCACCGTTT 59.165 50.000 0.00 0.00 0.00 3.60
364 374 1.056660 ATTCACCACTCTCCACCGTT 58.943 50.000 0.00 0.00 0.00 4.44
365 375 1.056660 AATTCACCACTCTCCACCGT 58.943 50.000 0.00 0.00 0.00 4.83
366 376 3.133003 AGATAATTCACCACTCTCCACCG 59.867 47.826 0.00 0.00 0.00 4.94
367 377 4.698575 GAGATAATTCACCACTCTCCACC 58.301 47.826 0.00 0.00 0.00 4.61
368 378 4.363999 CGAGATAATTCACCACTCTCCAC 58.636 47.826 0.00 0.00 30.82 4.02
369 379 3.181475 GCGAGATAATTCACCACTCTCCA 60.181 47.826 0.00 0.00 30.82 3.86
370 380 3.181475 TGCGAGATAATTCACCACTCTCC 60.181 47.826 0.00 0.00 30.82 3.71
371 381 4.046938 TGCGAGATAATTCACCACTCTC 57.953 45.455 0.00 0.00 0.00 3.20
372 382 4.471904 TTGCGAGATAATTCACCACTCT 57.528 40.909 0.00 0.00 0.00 3.24
373 383 5.505286 CAATTGCGAGATAATTCACCACTC 58.495 41.667 0.00 0.00 0.00 3.51
376 386 4.291540 GCAATTGCGAGATAATTCACCA 57.708 40.909 15.87 0.00 0.00 4.17
392 406 1.896220 TGCTCTCTTGTTCCGCAATT 58.104 45.000 0.00 0.00 36.36 2.32
420 434 7.550196 AATGAAAAACATTTCAGCAAACTGAGT 59.450 29.630 9.53 0.00 45.15 3.41
459 474 2.910688 ATACATTACAGCCACCCGAG 57.089 50.000 0.00 0.00 0.00 4.63
461 476 3.194005 AGAATACATTACAGCCACCCG 57.806 47.619 0.00 0.00 0.00 5.28
510 530 4.617959 GGGCAAACCTAAGACTTCAAAAC 58.382 43.478 0.00 0.00 35.85 2.43
546 567 6.995511 TTTTATGTACATGGTCAGGCTTAC 57.004 37.500 18.81 0.00 0.00 2.34
706 760 0.109319 CCCTCCGCCGTTTCAAAATG 60.109 55.000 0.00 0.00 0.00 2.32
738 792 3.696051 GCTGTGCAAAATATCTGGGAAGA 59.304 43.478 0.00 0.00 0.00 2.87
742 796 2.478370 CGTGCTGTGCAAAATATCTGGG 60.478 50.000 0.00 0.00 41.47 4.45
744 798 3.745332 TCGTGCTGTGCAAAATATCTG 57.255 42.857 0.00 0.00 41.47 2.90
759 1216 7.223582 TCTGAAAGAAGAATGAGAATATCGTGC 59.776 37.037 0.00 0.00 42.31 5.34
778 1235 5.428496 TGTGAATCTGCAAGTTCTGAAAG 57.572 39.130 10.88 0.00 33.76 2.62
780 1237 5.048504 GGAATGTGAATCTGCAAGTTCTGAA 60.049 40.000 10.88 0.00 33.76 3.02
782 1239 4.458295 AGGAATGTGAATCTGCAAGTTCTG 59.542 41.667 10.88 0.00 33.76 3.02
793 1250 5.627499 TTGCACTACAAGGAATGTGAATC 57.373 39.130 0.00 0.00 43.77 2.52
795 1252 6.403866 AATTTGCACTACAAGGAATGTGAA 57.596 33.333 0.00 0.00 43.77 3.18
796 1253 6.349280 GCTAATTTGCACTACAAGGAATGTGA 60.349 38.462 7.02 0.00 43.77 3.58
801 1258 6.234920 TGTAGCTAATTTGCACTACAAGGAA 58.765 36.000 14.27 0.00 41.37 3.36
802 1259 5.800296 TGTAGCTAATTTGCACTACAAGGA 58.200 37.500 14.27 0.00 41.37 3.36
803 1260 5.643777 ACTGTAGCTAATTTGCACTACAAGG 59.356 40.000 14.27 6.77 43.10 3.61
804 1261 6.727824 ACTGTAGCTAATTTGCACTACAAG 57.272 37.500 14.27 10.25 43.10 3.16
805 1262 7.876068 AGTAACTGTAGCTAATTTGCACTACAA 59.124 33.333 14.27 0.00 43.10 2.41
806 1263 7.383687 AGTAACTGTAGCTAATTTGCACTACA 58.616 34.615 14.27 12.63 41.90 2.74
807 1264 7.829378 AGTAACTGTAGCTAATTTGCACTAC 57.171 36.000 14.27 9.01 36.40 2.73
809 1266 9.751542 CTATAGTAACTGTAGCTAATTTGCACT 57.248 33.333 14.27 8.86 34.99 4.40
810 1267 8.979574 CCTATAGTAACTGTAGCTAATTTGCAC 58.020 37.037 14.27 10.19 34.99 4.57
811 1268 8.920174 TCCTATAGTAACTGTAGCTAATTTGCA 58.080 33.333 14.27 0.00 34.99 4.08
812 1269 9.413048 CTCCTATAGTAACTGTAGCTAATTTGC 57.587 37.037 3.49 3.49 0.00 3.68
816 1273 9.729281 GAGACTCCTATAGTAACTGTAGCTAAT 57.271 37.037 0.00 0.00 39.07 1.73
817 1274 8.712103 TGAGACTCCTATAGTAACTGTAGCTAA 58.288 37.037 0.00 0.00 39.07 3.09
818 1275 8.149647 GTGAGACTCCTATAGTAACTGTAGCTA 58.850 40.741 0.00 0.00 39.07 3.32
896 1353 3.357079 CACAAGCCACTCCGGTGC 61.357 66.667 0.00 0.06 41.75 5.01
912 1369 3.332385 TCTGCATGGAGCCTGGCA 61.332 61.111 22.65 0.00 44.83 4.92
913 1370 2.516460 CTCTGCATGGAGCCTGGC 60.516 66.667 11.65 11.65 44.83 4.85
957 1415 0.104934 ATGGGAAGGGAGCCTCGTAT 60.105 55.000 0.00 0.00 30.89 3.06
958 1416 1.048724 CATGGGAAGGGAGCCTCGTA 61.049 60.000 0.00 0.00 30.89 3.43
967 1425 1.518774 GTGCAATGCATGGGAAGGG 59.481 57.895 12.38 0.00 41.91 3.95
968 1426 1.259142 TGGTGCAATGCATGGGAAGG 61.259 55.000 12.38 0.00 41.91 3.46
969 1427 0.108520 GTGGTGCAATGCATGGGAAG 60.109 55.000 12.38 0.00 41.91 3.46
970 1428 1.543065 GGTGGTGCAATGCATGGGAA 61.543 55.000 12.38 0.00 41.91 3.97
1017 1484 7.553334 AGTTGTAATGGTGATAGACGTAATGT 58.447 34.615 0.00 0.00 0.00 2.71
1021 1488 6.927416 ACAAGTTGTAATGGTGATAGACGTA 58.073 36.000 6.75 0.00 0.00 3.57
1027 1494 7.333423 GCTCAAGTACAAGTTGTAATGGTGATA 59.667 37.037 19.08 1.75 34.21 2.15
1035 1502 5.526111 GTCCTTGCTCAAGTACAAGTTGTAA 59.474 40.000 17.16 1.33 41.36 2.41
1145 1622 3.998672 TGGGGTCGGCTTGTCGTC 61.999 66.667 0.00 0.00 0.00 4.20
1146 1623 4.309950 GTGGGGTCGGCTTGTCGT 62.310 66.667 0.00 0.00 0.00 4.34
1229 1706 2.665000 CCACGTGGTCAGGATGCT 59.335 61.111 26.95 0.00 34.76 3.79
1342 1819 4.759096 GTGCCGTTCATGTGCCGC 62.759 66.667 0.00 0.00 0.00 6.53
1345 1822 1.137404 GATGGTGCCGTTCATGTGC 59.863 57.895 0.00 0.00 0.00 4.57
1513 1999 1.376037 CTTCGACAGCACCTTCCCC 60.376 63.158 0.00 0.00 0.00 4.81
1528 2014 1.068921 GCGGAGGGAGCTCATCTTC 59.931 63.158 17.19 10.09 0.00 2.87
1536 2022 2.760385 ACAGGTAGCGGAGGGAGC 60.760 66.667 0.00 0.00 0.00 4.70
1685 2171 1.592400 CTCAGGTCGAGGTACGCCAA 61.592 60.000 0.00 0.00 42.26 4.52
1768 2257 2.042686 AGCTGTTGTTGCTCAAGTCA 57.957 45.000 0.00 0.00 35.67 3.41
1851 2340 1.503542 CTGCCGGTGATCTTGTTGC 59.496 57.895 1.90 0.00 0.00 4.17
1862 2351 4.096003 CGGTGGAATCCTGCCGGT 62.096 66.667 21.65 0.00 38.39 5.28
1890 2379 1.680651 CTCAGAGACCCGAGCAGGT 60.681 63.158 0.00 0.00 45.12 4.00
1898 2387 1.724582 GCGAGAGAGCTCAGAGACCC 61.725 65.000 17.77 0.00 41.36 4.46
1924 2413 1.805945 GCCTACGAGCAGGTTGTCG 60.806 63.158 0.00 0.00 42.04 4.35
1971 2460 4.749310 CGAGGCGCCACAGCTTCT 62.749 66.667 31.54 4.27 40.52 2.85
2137 2626 2.987125 CCCCCGATTCTGTTCCGT 59.013 61.111 0.00 0.00 0.00 4.69
2147 2636 3.873812 GGGAATGACGCCCCCGAT 61.874 66.667 0.00 0.00 39.81 4.18
2247 2736 4.603946 GGACGCCCGCCATCCTAC 62.604 72.222 0.00 0.00 0.00 3.18
2437 2927 4.502171 TTATGAGTGTGTGGTGCAATTG 57.498 40.909 0.00 0.00 0.00 2.32
2438 2928 4.158394 GGATTATGAGTGTGTGGTGCAATT 59.842 41.667 0.00 0.00 0.00 2.32
2439 2929 3.696051 GGATTATGAGTGTGTGGTGCAAT 59.304 43.478 0.00 0.00 0.00 3.56
2440 2930 3.081061 GGATTATGAGTGTGTGGTGCAA 58.919 45.455 0.00 0.00 0.00 4.08
2447 2937 9.334947 CATTCTCTTATTGGATTATGAGTGTGT 57.665 33.333 0.00 0.00 0.00 3.72
2481 2981 4.534168 CAACTGCAGCATGTATGATAAGC 58.466 43.478 15.27 0.00 39.31 3.09
2530 3127 9.754382 GGTTGAGCAACAATGATGATAATTATT 57.246 29.630 14.55 0.00 42.85 1.40
2598 3241 1.200948 GAGAGGCAGGCATTTCAACAC 59.799 52.381 0.00 0.00 0.00 3.32
2599 3242 1.074405 AGAGAGGCAGGCATTTCAACA 59.926 47.619 0.00 0.00 0.00 3.33
2600 3243 1.831580 AGAGAGGCAGGCATTTCAAC 58.168 50.000 0.00 0.00 0.00 3.18
2601 3244 2.224843 TGAAGAGAGGCAGGCATTTCAA 60.225 45.455 0.00 0.00 0.00 2.69
2602 3245 1.352017 TGAAGAGAGGCAGGCATTTCA 59.648 47.619 0.00 0.00 0.00 2.69
2603 3246 2.119801 TGAAGAGAGGCAGGCATTTC 57.880 50.000 0.00 0.00 0.00 2.17
2604 3247 2.025605 TGATGAAGAGAGGCAGGCATTT 60.026 45.455 0.00 0.00 0.00 2.32
2605 3248 1.562942 TGATGAAGAGAGGCAGGCATT 59.437 47.619 0.00 0.00 0.00 3.56
2606 3249 1.210538 TGATGAAGAGAGGCAGGCAT 58.789 50.000 0.00 0.00 0.00 4.40
2607 3250 0.986527 TTGATGAAGAGAGGCAGGCA 59.013 50.000 0.00 0.00 0.00 4.75
2608 3251 2.345124 ATTGATGAAGAGAGGCAGGC 57.655 50.000 0.00 0.00 0.00 4.85
2609 3252 2.871022 CGAATTGATGAAGAGAGGCAGG 59.129 50.000 0.00 0.00 0.00 4.85
2610 3253 3.790091 TCGAATTGATGAAGAGAGGCAG 58.210 45.455 0.00 0.00 0.00 4.85
2611 3254 3.893326 TCGAATTGATGAAGAGAGGCA 57.107 42.857 0.00 0.00 0.00 4.75
2612 3255 4.187694 AGTTCGAATTGATGAAGAGAGGC 58.812 43.478 0.00 0.00 0.00 4.70
2613 3256 8.430801 AAATAGTTCGAATTGATGAAGAGAGG 57.569 34.615 0.00 0.00 0.00 3.69
2629 3272 9.878599 ACTCATTCTTGTTGTAAAAATAGTTCG 57.121 29.630 0.00 0.00 0.00 3.95
2639 3282 9.944663 GACATTTAACACTCATTCTTGTTGTAA 57.055 29.630 0.00 0.00 36.61 2.41
2640 3283 9.114952 TGACATTTAACACTCATTCTTGTTGTA 57.885 29.630 0.00 0.00 36.61 2.41
2641 3284 7.995289 TGACATTTAACACTCATTCTTGTTGT 58.005 30.769 0.00 0.00 36.61 3.32
2642 3285 8.854979 TTGACATTTAACACTCATTCTTGTTG 57.145 30.769 0.00 0.00 36.61 3.33
2693 3339 9.103861 GAGTACATATTTGGAAGGAAAAGAGAG 57.896 37.037 0.00 0.00 0.00 3.20
2695 3341 7.283354 GGGAGTACATATTTGGAAGGAAAAGAG 59.717 40.741 0.00 0.00 0.00 2.85
2705 3354 3.649843 ACGGAGGGAGTACATATTTGGA 58.350 45.455 0.00 0.00 0.00 3.53
2711 3360 2.832643 TGGAACGGAGGGAGTACATA 57.167 50.000 0.00 0.00 0.00 2.29
2712 3361 1.946984 TTGGAACGGAGGGAGTACAT 58.053 50.000 0.00 0.00 0.00 2.29
2713 3362 1.719529 TTTGGAACGGAGGGAGTACA 58.280 50.000 0.00 0.00 0.00 2.90
2714 3363 3.345508 AATTTGGAACGGAGGGAGTAC 57.654 47.619 0.00 0.00 0.00 2.73
2715 3364 4.098894 AGTAATTTGGAACGGAGGGAGTA 58.901 43.478 0.00 0.00 0.00 2.59
2716 3365 2.910977 AGTAATTTGGAACGGAGGGAGT 59.089 45.455 0.00 0.00 0.00 3.85
2717 3366 3.629142 AGTAATTTGGAACGGAGGGAG 57.371 47.619 0.00 0.00 0.00 4.30
2718 3367 3.073356 ACAAGTAATTTGGAACGGAGGGA 59.927 43.478 0.00 0.00 41.25 4.20
2719 3368 3.418047 ACAAGTAATTTGGAACGGAGGG 58.582 45.455 0.00 0.00 41.25 4.30
2720 3369 3.124636 CGACAAGTAATTTGGAACGGAGG 59.875 47.826 0.00 0.00 41.25 4.30
2721 3370 3.424433 GCGACAAGTAATTTGGAACGGAG 60.424 47.826 0.00 0.00 41.25 4.63
2722 3371 2.481185 GCGACAAGTAATTTGGAACGGA 59.519 45.455 0.00 0.00 41.25 4.69
2723 3372 2.224549 TGCGACAAGTAATTTGGAACGG 59.775 45.455 0.00 0.00 41.25 4.44
2724 3373 3.185594 TCTGCGACAAGTAATTTGGAACG 59.814 43.478 0.00 0.00 41.25 3.95
2725 3374 4.742438 TCTGCGACAAGTAATTTGGAAC 57.258 40.909 0.00 0.00 41.25 3.62
2726 3375 5.759506 TTTCTGCGACAAGTAATTTGGAA 57.240 34.783 0.00 0.00 41.25 3.53
2727 3376 5.335583 CCATTTCTGCGACAAGTAATTTGGA 60.336 40.000 0.00 0.00 41.25 3.53
2728 3377 4.858692 CCATTTCTGCGACAAGTAATTTGG 59.141 41.667 0.00 0.00 41.25 3.28
2729 3378 5.698832 TCCATTTCTGCGACAAGTAATTTG 58.301 37.500 0.00 0.00 42.68 2.32
2730 3379 5.957842 TCCATTTCTGCGACAAGTAATTT 57.042 34.783 0.00 0.00 0.00 1.82
2731 3380 5.415701 ACATCCATTTCTGCGACAAGTAATT 59.584 36.000 0.00 0.00 0.00 1.40
2732 3381 4.943705 ACATCCATTTCTGCGACAAGTAAT 59.056 37.500 0.00 0.00 0.00 1.89
2733 3382 4.323417 ACATCCATTTCTGCGACAAGTAA 58.677 39.130 0.00 0.00 0.00 2.24
2734 3383 3.937814 ACATCCATTTCTGCGACAAGTA 58.062 40.909 0.00 0.00 0.00 2.24
2735 3384 2.783135 ACATCCATTTCTGCGACAAGT 58.217 42.857 0.00 0.00 0.00 3.16
2736 3385 4.813161 AGATACATCCATTTCTGCGACAAG 59.187 41.667 0.00 0.00 0.00 3.16
2737 3386 4.769688 AGATACATCCATTTCTGCGACAA 58.230 39.130 0.00 0.00 0.00 3.18
2738 3387 4.406648 AGATACATCCATTTCTGCGACA 57.593 40.909 0.00 0.00 0.00 4.35
2739 3388 5.773575 TCTAGATACATCCATTTCTGCGAC 58.226 41.667 0.00 0.00 0.00 5.19
2740 3389 6.040955 AGTTCTAGATACATCCATTTCTGCGA 59.959 38.462 0.00 0.00 0.00 5.10
2741 3390 6.219473 AGTTCTAGATACATCCATTTCTGCG 58.781 40.000 0.00 0.00 0.00 5.18
2742 3391 9.547753 TTTAGTTCTAGATACATCCATTTCTGC 57.452 33.333 0.00 0.00 0.00 4.26
2781 3430 8.242053 CGAATTACTTGTCGTAGGTATGGATAT 58.758 37.037 0.00 0.00 32.61 1.63
2782 3431 7.308770 CCGAATTACTTGTCGTAGGTATGGATA 60.309 40.741 0.00 0.00 35.48 2.59
2783 3432 6.444633 CGAATTACTTGTCGTAGGTATGGAT 58.555 40.000 0.00 0.00 32.61 3.41
2784 3433 5.221106 CCGAATTACTTGTCGTAGGTATGGA 60.221 44.000 0.00 0.00 35.48 3.41
2785 3434 4.980434 CCGAATTACTTGTCGTAGGTATGG 59.020 45.833 0.00 0.00 35.48 2.74
2786 3435 5.824429 TCCGAATTACTTGTCGTAGGTATG 58.176 41.667 0.00 0.00 35.48 2.39
2787 3436 6.455360 TTCCGAATTACTTGTCGTAGGTAT 57.545 37.500 0.00 0.00 35.48 2.73
2788 3437 5.163622 CCTTCCGAATTACTTGTCGTAGGTA 60.164 44.000 0.00 0.00 34.76 3.08
2789 3438 4.381292 CCTTCCGAATTACTTGTCGTAGGT 60.381 45.833 0.00 0.00 34.76 3.08
2790 3439 4.110482 CCTTCCGAATTACTTGTCGTAGG 58.890 47.826 0.00 0.00 35.48 3.18
2791 3440 4.110482 CCCTTCCGAATTACTTGTCGTAG 58.890 47.826 0.00 0.00 35.48 3.51
2792 3441 3.763360 TCCCTTCCGAATTACTTGTCGTA 59.237 43.478 0.00 0.00 35.48 3.43
2793 3442 2.564062 TCCCTTCCGAATTACTTGTCGT 59.436 45.455 0.00 0.00 35.48 4.34
2794 3443 3.187700 CTCCCTTCCGAATTACTTGTCG 58.812 50.000 0.00 0.00 37.01 4.35
2795 3444 3.532542 CCTCCCTTCCGAATTACTTGTC 58.467 50.000 0.00 0.00 0.00 3.18
2796 3445 2.238898 CCCTCCCTTCCGAATTACTTGT 59.761 50.000 0.00 0.00 0.00 3.16
2797 3446 2.504175 TCCCTCCCTTCCGAATTACTTG 59.496 50.000 0.00 0.00 0.00 3.16
2798 3447 2.772515 CTCCCTCCCTTCCGAATTACTT 59.227 50.000 0.00 0.00 0.00 2.24
2799 3448 2.292984 ACTCCCTCCCTTCCGAATTACT 60.293 50.000 0.00 0.00 0.00 2.24
2800 3449 2.117051 ACTCCCTCCCTTCCGAATTAC 58.883 52.381 0.00 0.00 0.00 1.89
2801 3450 2.563039 ACTCCCTCCCTTCCGAATTA 57.437 50.000 0.00 0.00 0.00 1.40
2802 3451 2.117051 GTACTCCCTCCCTTCCGAATT 58.883 52.381 0.00 0.00 0.00 2.17
2803 3452 1.007963 TGTACTCCCTCCCTTCCGAAT 59.992 52.381 0.00 0.00 0.00 3.34
2804 3453 0.410663 TGTACTCCCTCCCTTCCGAA 59.589 55.000 0.00 0.00 0.00 4.30
2805 3454 0.410663 TTGTACTCCCTCCCTTCCGA 59.589 55.000 0.00 0.00 0.00 4.55
2806 3455 1.139058 CATTGTACTCCCTCCCTTCCG 59.861 57.143 0.00 0.00 0.00 4.30
2807 3456 1.490910 CCATTGTACTCCCTCCCTTCC 59.509 57.143 0.00 0.00 0.00 3.46
2808 3457 2.478292 TCCATTGTACTCCCTCCCTTC 58.522 52.381 0.00 0.00 0.00 3.46
2809 3458 2.661176 TCCATTGTACTCCCTCCCTT 57.339 50.000 0.00 0.00 0.00 3.95
2810 3459 2.412591 CATCCATTGTACTCCCTCCCT 58.587 52.381 0.00 0.00 0.00 4.20
2811 3460 1.202818 GCATCCATTGTACTCCCTCCC 60.203 57.143 0.00 0.00 0.00 4.30
2812 3461 1.202818 GGCATCCATTGTACTCCCTCC 60.203 57.143 0.00 0.00 0.00 4.30
2813 3462 1.490490 TGGCATCCATTGTACTCCCTC 59.510 52.381 0.00 0.00 0.00 4.30
2814 3463 1.492176 CTGGCATCCATTGTACTCCCT 59.508 52.381 0.00 0.00 30.82 4.20
2815 3464 1.490490 TCTGGCATCCATTGTACTCCC 59.510 52.381 0.00 0.00 30.82 4.30
2816 3465 2.171448 ACTCTGGCATCCATTGTACTCC 59.829 50.000 0.00 0.00 30.82 3.85
2817 3466 3.550437 ACTCTGGCATCCATTGTACTC 57.450 47.619 0.00 0.00 30.82 2.59
2818 3467 3.009473 ACAACTCTGGCATCCATTGTACT 59.991 43.478 5.17 0.00 33.97 2.73
2819 3468 3.347216 ACAACTCTGGCATCCATTGTAC 58.653 45.455 5.17 0.00 33.97 2.90
2845 3494 6.971527 TGTTACTGTTAATGGTTGGATACG 57.028 37.500 0.00 0.00 42.51 3.06
2846 3495 8.181573 CACATGTTACTGTTAATGGTTGGATAC 58.818 37.037 0.00 0.00 0.00 2.24
2890 3542 5.241403 TCAATGACCATAGGTTCTGTTGT 57.759 39.130 0.00 0.00 35.25 3.32
2899 3551 5.421693 TGGGTTCAATTTCAATGACCATAGG 59.578 40.000 0.00 0.00 0.00 2.57
2903 3555 5.620738 TTTGGGTTCAATTTCAATGACCA 57.379 34.783 0.00 0.00 32.28 4.02
2919 3573 5.930837 TTGAAGAGTTGTTGAATTTGGGT 57.069 34.783 0.00 0.00 0.00 4.51
2946 3600 7.865385 GTCTACTTCATGTCATGGAACTCTATC 59.135 40.741 12.90 0.00 0.00 2.08
2949 3603 5.481824 TGTCTACTTCATGTCATGGAACTCT 59.518 40.000 12.90 0.00 0.00 3.24
2972 3626 3.624326 TCATTGAAGGTTCGCTGTTTG 57.376 42.857 0.00 0.00 0.00 2.93
2975 3629 4.549458 CATTTTCATTGAAGGTTCGCTGT 58.451 39.130 0.00 0.00 0.00 4.40
2976 3630 3.365820 GCATTTTCATTGAAGGTTCGCTG 59.634 43.478 0.00 0.00 0.00 5.18
2977 3631 3.005684 TGCATTTTCATTGAAGGTTCGCT 59.994 39.130 0.00 0.00 0.00 4.93
2990 3644 7.660617 TGCATTTTATTTCCTTCTGCATTTTCA 59.339 29.630 0.00 0.00 33.59 2.69
2992 3646 7.444792 TGTGCATTTTATTTCCTTCTGCATTTT 59.555 29.630 0.00 0.00 39.94 1.82
2996 3650 5.465532 TGTGCATTTTATTTCCTTCTGCA 57.534 34.783 0.00 0.00 35.93 4.41
3004 3658 7.814107 TCAGACCTCATTTGTGCATTTTATTTC 59.186 33.333 0.00 0.00 0.00 2.17
3010 3664 4.147321 ACTCAGACCTCATTTGTGCATTT 58.853 39.130 0.00 0.00 0.00 2.32
3016 3670 6.426646 AACTAGAACTCAGACCTCATTTGT 57.573 37.500 0.00 0.00 0.00 2.83
3067 3721 4.168088 AGGCTTATTAGTACATGGGCCTTT 59.832 41.667 4.53 0.00 45.16 3.11
3068 3722 3.722101 AGGCTTATTAGTACATGGGCCTT 59.278 43.478 4.53 0.00 45.16 4.35
3094 5448 3.873910 AGTTTCACGATGGTTCATAGGG 58.126 45.455 0.00 0.00 0.00 3.53
3124 5478 8.897752 CAATAAAATTCAGGAACCTAGGAGAAG 58.102 37.037 17.98 1.10 0.00 2.85
3130 5484 7.396540 AGCACAATAAAATTCAGGAACCTAG 57.603 36.000 0.00 0.00 0.00 3.02
3155 5509 3.817084 CTGTCTTTTCTCCACATCAAGCA 59.183 43.478 0.00 0.00 0.00 3.91
3156 5510 3.190118 CCTGTCTTTTCTCCACATCAAGC 59.810 47.826 0.00 0.00 0.00 4.01
3158 5512 4.136796 CACCTGTCTTTTCTCCACATCAA 58.863 43.478 0.00 0.00 0.00 2.57
3159 5513 3.496692 CCACCTGTCTTTTCTCCACATCA 60.497 47.826 0.00 0.00 0.00 3.07
3160 5514 3.077359 CCACCTGTCTTTTCTCCACATC 58.923 50.000 0.00 0.00 0.00 3.06
3161 5515 2.815589 GCCACCTGTCTTTTCTCCACAT 60.816 50.000 0.00 0.00 0.00 3.21
3164 5518 0.110486 GGCCACCTGTCTTTTCTCCA 59.890 55.000 0.00 0.00 0.00 3.86
3165 5519 0.110486 TGGCCACCTGTCTTTTCTCC 59.890 55.000 0.00 0.00 0.00 3.71
3166 5520 1.072331 TCTGGCCACCTGTCTTTTCTC 59.928 52.381 0.00 0.00 0.00 2.87
3167 5521 1.140312 TCTGGCCACCTGTCTTTTCT 58.860 50.000 0.00 0.00 0.00 2.52
3168 5522 1.239347 GTCTGGCCACCTGTCTTTTC 58.761 55.000 0.00 0.00 0.00 2.29
3169 5523 0.178990 GGTCTGGCCACCTGTCTTTT 60.179 55.000 0.00 0.00 37.17 2.27
3170 5524 1.352622 TGGTCTGGCCACCTGTCTTT 61.353 55.000 13.28 0.00 43.61 2.52
3171 5525 1.770110 TGGTCTGGCCACCTGTCTT 60.770 57.895 13.28 0.00 43.61 3.01
3172 5526 2.122413 TGGTCTGGCCACCTGTCT 60.122 61.111 13.28 0.00 43.61 3.41
3183 5537 4.442706 GTGTATCCAGTTACCATGGTCTG 58.557 47.826 23.76 22.31 39.01 3.51
3184 5538 3.132289 CGTGTATCCAGTTACCATGGTCT 59.868 47.826 23.76 10.88 39.01 3.85
3185 5539 3.131577 TCGTGTATCCAGTTACCATGGTC 59.868 47.826 23.76 8.26 39.01 4.02
3186 5540 3.101437 TCGTGTATCCAGTTACCATGGT 58.899 45.455 23.55 23.55 39.01 3.55
3187 5541 3.492656 CCTCGTGTATCCAGTTACCATGG 60.493 52.174 11.19 11.19 39.33 3.66
3188 5542 3.383505 TCCTCGTGTATCCAGTTACCATG 59.616 47.826 0.00 0.00 0.00 3.66
3189 5543 3.638860 TCCTCGTGTATCCAGTTACCAT 58.361 45.455 0.00 0.00 0.00 3.55
3190 5544 3.090210 TCCTCGTGTATCCAGTTACCA 57.910 47.619 0.00 0.00 0.00 3.25
3191 5545 3.635373 TCATCCTCGTGTATCCAGTTACC 59.365 47.826 0.00 0.00 0.00 2.85
3192 5546 4.338682 ACTCATCCTCGTGTATCCAGTTAC 59.661 45.833 0.00 0.00 0.00 2.50
3193 5547 4.533815 ACTCATCCTCGTGTATCCAGTTA 58.466 43.478 0.00 0.00 0.00 2.24
3194 5548 3.366396 ACTCATCCTCGTGTATCCAGTT 58.634 45.455 0.00 0.00 0.00 3.16
3195 5549 3.019799 ACTCATCCTCGTGTATCCAGT 57.980 47.619 0.00 0.00 0.00 4.00
3196 5550 3.381590 TGAACTCATCCTCGTGTATCCAG 59.618 47.826 0.00 0.00 0.00 3.86
3197 5551 3.361786 TGAACTCATCCTCGTGTATCCA 58.638 45.455 0.00 0.00 0.00 3.41
3198 5552 4.551388 GATGAACTCATCCTCGTGTATCC 58.449 47.826 8.28 0.00 45.24 2.59
3221 5575 2.695359 TCTTACATCTTGGCGGACAAC 58.305 47.619 0.00 0.00 34.76 3.32
3222 5576 3.410631 TTCTTACATCTTGGCGGACAA 57.589 42.857 0.00 0.00 37.55 3.18
3223 5577 3.270027 CATTCTTACATCTTGGCGGACA 58.730 45.455 0.00 0.00 0.00 4.02
3224 5578 2.032178 GCATTCTTACATCTTGGCGGAC 59.968 50.000 0.00 0.00 0.00 4.79
3225 5579 2.288666 GCATTCTTACATCTTGGCGGA 58.711 47.619 0.00 0.00 0.00 5.54
3226 5580 1.003545 CGCATTCTTACATCTTGGCGG 60.004 52.381 0.00 0.00 39.59 6.13
3227 5581 1.003545 CCGCATTCTTACATCTTGGCG 60.004 52.381 0.00 0.00 42.56 5.69
3228 5582 1.334869 CCCGCATTCTTACATCTTGGC 59.665 52.381 0.00 0.00 0.00 4.52
3229 5583 2.614057 GTCCCGCATTCTTACATCTTGG 59.386 50.000 0.00 0.00 0.00 3.61
3230 5584 3.535561 AGTCCCGCATTCTTACATCTTG 58.464 45.455 0.00 0.00 0.00 3.02
3231 5585 3.432326 GGAGTCCCGCATTCTTACATCTT 60.432 47.826 0.00 0.00 0.00 2.40
3232 5586 2.103263 GGAGTCCCGCATTCTTACATCT 59.897 50.000 0.00 0.00 0.00 2.90
3233 5587 2.158957 TGGAGTCCCGCATTCTTACATC 60.159 50.000 6.74 0.00 34.29 3.06
3234 5588 1.837439 TGGAGTCCCGCATTCTTACAT 59.163 47.619 6.74 0.00 34.29 2.29
3235 5589 1.271856 TGGAGTCCCGCATTCTTACA 58.728 50.000 6.74 0.00 34.29 2.41
3236 5590 2.484889 GATGGAGTCCCGCATTCTTAC 58.515 52.381 6.74 0.00 34.29 2.34
3237 5591 1.416401 GGATGGAGTCCCGCATTCTTA 59.584 52.381 6.74 0.00 41.50 2.10
3238 5592 0.181350 GGATGGAGTCCCGCATTCTT 59.819 55.000 6.74 0.00 41.50 2.52
3239 5593 1.832912 GGATGGAGTCCCGCATTCT 59.167 57.895 6.74 0.00 41.50 2.40
3240 5594 4.464262 GGATGGAGTCCCGCATTC 57.536 61.111 6.74 0.00 41.50 2.67
3257 5611 1.430992 TTATAAAGAGCGGGAGGGGG 58.569 55.000 0.00 0.00 0.00 5.40
3258 5612 2.224548 CCTTTATAAAGAGCGGGAGGGG 60.225 54.545 23.95 3.03 38.28 4.79
3259 5613 2.704065 TCCTTTATAAAGAGCGGGAGGG 59.296 50.000 23.95 7.29 38.28 4.30
3260 5614 4.127907 GTTCCTTTATAAAGAGCGGGAGG 58.872 47.826 23.95 7.85 38.28 4.30
3261 5615 3.802685 CGTTCCTTTATAAAGAGCGGGAG 59.197 47.826 23.95 7.71 38.28 4.30
3262 5616 3.431207 CCGTTCCTTTATAAAGAGCGGGA 60.431 47.826 27.90 17.28 38.91 5.14
3263 5617 2.870411 CCGTTCCTTTATAAAGAGCGGG 59.130 50.000 27.90 19.67 38.91 6.13
3264 5618 2.870411 CCCGTTCCTTTATAAAGAGCGG 59.130 50.000 28.25 28.25 40.46 5.52
3265 5619 2.870411 CCCCGTTCCTTTATAAAGAGCG 59.130 50.000 23.95 21.27 38.28 5.03
3266 5620 3.882444 ACCCCGTTCCTTTATAAAGAGC 58.118 45.455 23.95 13.04 38.28 4.09
3267 5621 4.638865 CCAACCCCGTTCCTTTATAAAGAG 59.361 45.833 23.95 14.78 38.28 2.85
3268 5622 4.568169 CCCAACCCCGTTCCTTTATAAAGA 60.568 45.833 23.95 9.42 38.28 2.52
3269 5623 3.697542 CCCAACCCCGTTCCTTTATAAAG 59.302 47.826 16.90 16.90 35.79 1.85
3270 5624 3.563915 CCCCAACCCCGTTCCTTTATAAA 60.564 47.826 0.00 0.00 0.00 1.40
3271 5625 2.025131 CCCCAACCCCGTTCCTTTATAA 60.025 50.000 0.00 0.00 0.00 0.98
3272 5626 1.565288 CCCCAACCCCGTTCCTTTATA 59.435 52.381 0.00 0.00 0.00 0.98
3273 5627 0.333652 CCCCAACCCCGTTCCTTTAT 59.666 55.000 0.00 0.00 0.00 1.40
3274 5628 1.769006 CCCCAACCCCGTTCCTTTA 59.231 57.895 0.00 0.00 0.00 1.85
3275 5629 2.524044 CCCCAACCCCGTTCCTTT 59.476 61.111 0.00 0.00 0.00 3.11
3276 5630 4.295199 GCCCCAACCCCGTTCCTT 62.295 66.667 0.00 0.00 0.00 3.36
3278 5632 4.735358 GAGCCCCAACCCCGTTCC 62.735 72.222 0.00 0.00 0.00 3.62
3279 5633 3.920093 CTGAGCCCCAACCCCGTTC 62.920 68.421 0.00 0.00 0.00 3.95
3280 5634 3.966543 CTGAGCCCCAACCCCGTT 61.967 66.667 0.00 0.00 0.00 4.44
3299 5653 4.545706 TATTGGCAGAGCGGGGCG 62.546 66.667 0.00 0.00 0.00 6.13
3300 5654 1.728490 CTTTATTGGCAGAGCGGGGC 61.728 60.000 0.00 0.00 0.00 5.80
3301 5655 0.107214 TCTTTATTGGCAGAGCGGGG 60.107 55.000 0.00 0.00 0.00 5.73
3302 5656 1.017387 GTCTTTATTGGCAGAGCGGG 58.983 55.000 0.00 0.00 0.00 6.13
3303 5657 0.652592 CGTCTTTATTGGCAGAGCGG 59.347 55.000 0.00 0.00 0.00 5.52
3304 5658 0.026803 GCGTCTTTATTGGCAGAGCG 59.973 55.000 0.00 0.00 0.00 5.03
3305 5659 0.026803 CGCGTCTTTATTGGCAGAGC 59.973 55.000 0.00 0.00 0.00 4.09
3306 5660 0.652592 CCGCGTCTTTATTGGCAGAG 59.347 55.000 4.92 0.00 0.00 3.35
3307 5661 0.248012 TCCGCGTCTTTATTGGCAGA 59.752 50.000 4.92 0.00 0.00 4.26
3308 5662 1.062587 CTTCCGCGTCTTTATTGGCAG 59.937 52.381 4.92 0.00 0.00 4.85
3309 5663 1.083489 CTTCCGCGTCTTTATTGGCA 58.917 50.000 4.92 0.00 0.00 4.92
3310 5664 0.377203 CCTTCCGCGTCTTTATTGGC 59.623 55.000 4.92 0.00 0.00 4.52
3311 5665 0.377203 GCCTTCCGCGTCTTTATTGG 59.623 55.000 4.92 0.00 0.00 3.16
3312 5666 3.897819 GCCTTCCGCGTCTTTATTG 57.102 52.632 4.92 0.00 0.00 1.90
3332 5686 4.078516 GTCGGTCCCGGTTCCCTG 62.079 72.222 5.80 0.00 40.25 4.45
3376 5730 3.837570 AACGGTGGAGGCGGGAAAC 62.838 63.158 0.00 0.00 0.00 2.78
3377 5731 3.122727 AAACGGTGGAGGCGGGAAA 62.123 57.895 0.00 0.00 0.00 3.13
3378 5732 3.562232 AAACGGTGGAGGCGGGAA 61.562 61.111 0.00 0.00 0.00 3.97
3379 5733 4.323477 CAAACGGTGGAGGCGGGA 62.323 66.667 0.00 0.00 0.00 5.14
3383 5737 3.670377 GTGGCAAACGGTGGAGGC 61.670 66.667 0.00 0.00 0.00 4.70
3384 5738 2.983592 GGTGGCAAACGGTGGAGG 60.984 66.667 0.00 0.00 0.00 4.30
3385 5739 2.983592 GGGTGGCAAACGGTGGAG 60.984 66.667 0.00 0.00 0.00 3.86
3386 5740 4.589675 GGGGTGGCAAACGGTGGA 62.590 66.667 0.00 0.00 0.00 4.02
3387 5741 4.904590 TGGGGTGGCAAACGGTGG 62.905 66.667 0.00 0.00 0.00 4.61
3388 5742 2.835431 TTGGGGTGGCAAACGGTG 60.835 61.111 0.00 0.00 0.00 4.94
3389 5743 2.520741 CTTGGGGTGGCAAACGGT 60.521 61.111 0.00 0.00 0.00 4.83
3390 5744 3.989787 GCTTGGGGTGGCAAACGG 61.990 66.667 0.00 0.00 0.00 4.44
3391 5745 4.341502 CGCTTGGGGTGGCAAACG 62.342 66.667 0.00 0.00 0.00 3.60
3392 5746 4.662961 GCGCTTGGGGTGGCAAAC 62.663 66.667 0.00 0.00 0.00 2.93
3394 5748 4.992740 ATGCGCTTGGGGTGGCAA 62.993 61.111 9.73 0.00 39.09 4.52
3397 5751 4.738998 TCCATGCGCTTGGGGTGG 62.739 66.667 34.24 19.90 37.37 4.61
3398 5752 2.676121 TTCCATGCGCTTGGGGTG 60.676 61.111 34.24 14.95 37.37 4.61
3399 5753 2.361610 CTTCCATGCGCTTGGGGT 60.362 61.111 34.24 1.68 37.37 4.95
3400 5754 2.045045 TCTTCCATGCGCTTGGGG 60.045 61.111 34.24 27.03 37.37 4.96
3401 5755 1.033746 ATGTCTTCCATGCGCTTGGG 61.034 55.000 34.24 22.65 37.37 4.12
3402 5756 0.099968 CATGTCTTCCATGCGCTTGG 59.900 55.000 31.02 31.02 44.21 3.61
3403 5757 3.616935 CATGTCTTCCATGCGCTTG 57.383 52.632 15.90 15.90 44.21 4.01
3410 5764 0.392998 GTCCGCCACATGTCTTCCAT 60.393 55.000 0.00 0.00 0.00 3.41
3411 5765 1.003839 GTCCGCCACATGTCTTCCA 60.004 57.895 0.00 0.00 0.00 3.53
3412 5766 2.100631 CGTCCGCCACATGTCTTCC 61.101 63.158 0.00 0.00 0.00 3.46
3413 5767 1.374252 ACGTCCGCCACATGTCTTC 60.374 57.895 0.00 0.00 0.00 2.87
3414 5768 1.667830 CACGTCCGCCACATGTCTT 60.668 57.895 0.00 0.00 0.00 3.01
3415 5769 2.048222 CACGTCCGCCACATGTCT 60.048 61.111 0.00 0.00 0.00 3.41
3416 5770 3.788766 GCACGTCCGCCACATGTC 61.789 66.667 0.00 0.00 0.00 3.06
3417 5771 4.617520 TGCACGTCCGCCACATGT 62.618 61.111 0.00 0.00 0.00 3.21
3418 5772 3.792047 CTGCACGTCCGCCACATG 61.792 66.667 0.00 0.00 0.00 3.21
3419 5773 3.529341 TTCTGCACGTCCGCCACAT 62.529 57.895 0.00 0.00 0.00 3.21
3420 5774 4.228567 TTCTGCACGTCCGCCACA 62.229 61.111 0.00 0.00 0.00 4.17
3421 5775 3.712881 GTTCTGCACGTCCGCCAC 61.713 66.667 0.00 0.00 0.00 5.01
3422 5776 4.980805 GGTTCTGCACGTCCGCCA 62.981 66.667 0.00 0.00 0.00 5.69
3425 5779 2.805353 CTCGGTTCTGCACGTCCG 60.805 66.667 4.84 4.84 43.65 4.79
3426 5780 2.432628 CCTCGGTTCTGCACGTCC 60.433 66.667 0.00 0.00 0.00 4.79
3427 5781 2.432628 CCCTCGGTTCTGCACGTC 60.433 66.667 0.00 0.00 0.00 4.34
3428 5782 4.003788 CCCCTCGGTTCTGCACGT 62.004 66.667 0.00 0.00 0.00 4.49
3429 5783 3.691342 TCCCCTCGGTTCTGCACG 61.691 66.667 0.00 0.00 0.00 5.34
3430 5784 2.047179 GTCCCCTCGGTTCTGCAC 60.047 66.667 0.00 0.00 0.00 4.57
3431 5785 3.691342 CGTCCCCTCGGTTCTGCA 61.691 66.667 0.00 0.00 0.00 4.41
3432 5786 4.452733 CCGTCCCCTCGGTTCTGC 62.453 72.222 0.00 0.00 44.77 4.26
3455 5809 2.501610 GGGATGGTGAGAGGTCGC 59.498 66.667 0.00 0.00 0.00 5.19
3456 5810 2.052690 ACGGGATGGTGAGAGGTCG 61.053 63.158 0.00 0.00 0.00 4.79
3457 5811 0.970937 TCACGGGATGGTGAGAGGTC 60.971 60.000 0.00 0.00 41.76 3.85
3458 5812 1.078528 TCACGGGATGGTGAGAGGT 59.921 57.895 0.00 0.00 41.76 3.85
3459 5813 4.034246 TCACGGGATGGTGAGAGG 57.966 61.111 0.00 0.00 41.76 3.69
3465 5819 2.731571 CCCACGATCACGGGATGGT 61.732 63.158 9.78 9.78 46.86 3.55
3466 5820 2.108976 CCCACGATCACGGGATGG 59.891 66.667 3.97 6.48 46.86 3.51
3467 5821 2.108976 CCCCACGATCACGGGATG 59.891 66.667 3.97 0.00 46.86 3.51
3468 5822 2.042333 TCCCCACGATCACGGGAT 60.042 61.111 16.50 0.00 46.86 3.85
3469 5823 2.758327 CTCCCCACGATCACGGGA 60.758 66.667 16.50 13.24 46.86 5.14
3470 5824 3.075005 ACTCCCCACGATCACGGG 61.075 66.667 9.16 9.16 44.46 5.28
3471 5825 2.184322 CACTCCCCACGATCACGG 59.816 66.667 0.00 0.00 44.46 4.94
3472 5826 2.184322 CCACTCCCCACGATCACG 59.816 66.667 0.00 0.00 45.75 4.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.