Multiple sequence alignment - TraesCS2A01G592900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G592900 chr2A 100.000 2664 0 0 1 2664 779810440 779807777 0.000000e+00 4920.0
1 TraesCS2A01G592900 chr2A 88.925 912 58 16 792 1674 779675427 779674530 0.000000e+00 1085.0
2 TraesCS2A01G592900 chr2A 93.525 139 9 0 444 582 779675767 779675629 9.670000e-50 207.0
3 TraesCS2A01G592900 chr2A 91.971 137 8 1 1730 1863 211337369 211337233 3.500000e-44 189.0
4 TraesCS2A01G592900 chr2A 96.330 109 4 0 1755 1863 115448334 115448442 2.110000e-41 180.0
5 TraesCS2A01G592900 chr2A 96.330 109 4 0 1755 1863 758094931 758094823 2.110000e-41 180.0
6 TraesCS2A01G592900 chr2A 96.875 32 1 0 1704 1735 779674426 779674395 1.000000e-03 54.7
7 TraesCS2A01G592900 chr2A 90.476 42 0 3 1696 1735 779846884 779846923 5.000000e-03 52.8
8 TraesCS2A01G592900 chr2D 84.102 1258 71 44 444 1670 633876945 633878104 0.000000e+00 1096.0
9 TraesCS2A01G592900 chr2D 95.493 355 15 1 1859 2213 650532436 650532789 1.380000e-157 566.0
10 TraesCS2A01G592900 chr2D 85.207 169 20 4 208 374 35641425 35641260 4.560000e-38 169.0
11 TraesCS2A01G592900 chr2D 84.524 168 21 4 208 373 74158330 74158166 7.630000e-36 161.0
12 TraesCS2A01G592900 chr2D 87.970 133 5 4 68 189 633876067 633876199 2.140000e-31 147.0
13 TraesCS2A01G592900 chr7B 86.576 663 68 11 1755 2417 642975012 642974371 0.000000e+00 712.0
14 TraesCS2A01G592900 chr7B 85.973 663 71 12 1755 2417 642990084 642989444 0.000000e+00 689.0
15 TraesCS2A01G592900 chr7B 85.973 663 72 11 1755 2417 643016339 643015698 0.000000e+00 689.0
16 TraesCS2A01G592900 chr7B 85.822 663 73 11 1755 2417 643003381 643002740 0.000000e+00 684.0
17 TraesCS2A01G592900 chr7B 84.545 110 16 1 1755 1863 525826693 525826584 1.010000e-19 108.0
18 TraesCS2A01G592900 chr2B 86.747 664 41 16 1004 1667 776888881 776889497 0.000000e+00 695.0
19 TraesCS2A01G592900 chr2B 92.969 256 9 2 2416 2664 776850313 776850566 5.420000e-97 364.0
20 TraesCS2A01G592900 chr2B 85.279 197 22 5 1350 1546 776841775 776841964 2.090000e-46 196.0
21 TraesCS2A01G592900 chr2B 81.564 179 9 6 843 1000 776888562 776888737 2.780000e-25 126.0
22 TraesCS2A01G592900 chr2B 88.660 97 5 4 555 645 776841094 776841190 2.170000e-21 113.0
23 TraesCS2A01G592900 chr3D 95.763 354 14 1 1858 2211 472074935 472075287 1.070000e-158 569.0
24 TraesCS2A01G592900 chr3D 95.493 355 15 1 1859 2213 75893191 75892838 1.380000e-157 566.0
25 TraesCS2A01G592900 chr3D 95.265 359 14 3 1856 2213 162181602 162181246 1.380000e-157 566.0
26 TraesCS2A01G592900 chr3D 84.118 170 22 4 208 375 193502609 193502443 2.740000e-35 159.0
27 TraesCS2A01G592900 chr6B 95.238 357 15 2 1858 2213 421311794 421312149 4.980000e-157 564.0
28 TraesCS2A01G592900 chr6B 89.349 169 14 3 206 373 233693130 233693295 2.690000e-50 209.0
29 TraesCS2A01G592900 chr6B 87.429 175 15 6 201 371 214866706 214866535 7.520000e-46 195.0
30 TraesCS2A01G592900 chr6B 87.719 171 16 4 205 373 643167432 643167599 7.520000e-46 195.0
31 TraesCS2A01G592900 chr6A 95.327 214 9 1 2207 2419 10924662 10924449 3.280000e-89 339.0
32 TraesCS2A01G592900 chr6A 87.209 172 15 4 210 376 76657981 76658150 3.500000e-44 189.0
33 TraesCS2A01G592900 chr6A 92.537 134 7 1 1733 1863 376474800 376474667 3.500000e-44 189.0
34 TraesCS2A01G592900 chr6A 86.905 168 17 4 208 373 598156565 598156401 1.630000e-42 183.0
35 TraesCS2A01G592900 chr6A 86.709 158 17 3 208 363 65548163 65548008 3.530000e-39 172.0
36 TraesCS2A01G592900 chrUn 95.305 213 8 2 2207 2417 30909828 30909616 1.180000e-88 337.0
37 TraesCS2A01G592900 chrUn 86.538 156 16 4 208 361 18079123 18078971 1.640000e-37 167.0
38 TraesCS2A01G592900 chrUn 82.390 159 21 5 219 373 202161176 202161021 5.980000e-27 132.0
39 TraesCS2A01G592900 chrUn 82.390 159 21 5 219 373 202182358 202182203 5.980000e-27 132.0
40 TraesCS2A01G592900 chrUn 82.677 127 13 7 201 324 437043011 437043131 1.300000e-18 104.0
41 TraesCS2A01G592900 chrUn 80.870 115 17 5 263 374 65957315 65957427 4.720000e-13 86.1
42 TraesCS2A01G592900 chrUn 90.909 44 3 1 330 373 278725050 278725008 1.030000e-04 58.4
43 TraesCS2A01G592900 chr1A 95.238 210 10 0 2211 2420 276652379 276652588 1.530000e-87 333.0
44 TraesCS2A01G592900 chr1A 84.524 168 20 6 210 373 507839496 507839331 7.630000e-36 161.0
45 TraesCS2A01G592900 chr5A 94.064 219 11 2 2207 2424 23935796 23935579 5.500000e-87 331.0
46 TraesCS2A01G592900 chr5A 92.609 230 13 4 2207 2433 45711726 45711498 7.110000e-86 327.0
47 TraesCS2A01G592900 chr5A 95.455 110 5 0 1754 1863 548766809 548766918 2.730000e-40 176.0
48 TraesCS2A01G592900 chr7A 88.304 171 14 5 206 374 53897095 53897261 1.620000e-47 200.0
49 TraesCS2A01G592900 chr7A 92.000 125 6 1 1755 1879 299276397 299276517 3.530000e-39 172.0
50 TraesCS2A01G592900 chr5D 88.690 168 14 4 208 373 312116189 312116353 1.620000e-47 200.0
51 TraesCS2A01G592900 chr5D 85.207 169 20 3 208 374 514551880 514551715 4.560000e-38 169.0
52 TraesCS2A01G592900 chr3A 87.931 174 15 4 206 375 733260750 733260579 1.620000e-47 200.0
53 TraesCS2A01G592900 chr1B 87.791 172 15 5 205 374 492367946 492368113 2.090000e-46 196.0
54 TraesCS2A01G592900 chr1B 87.500 168 15 5 208 373 327567965 327568128 3.500000e-44 189.0
55 TraesCS2A01G592900 chr3B 87.647 170 15 5 206 373 197796088 197796253 2.710000e-45 193.0
56 TraesCS2A01G592900 chr3B 91.200 125 7 1 1755 1879 736494180 736494060 1.640000e-37 167.0
57 TraesCS2A01G592900 chr6D 87.135 171 16 5 206 374 468888428 468888262 3.500000e-44 189.0
58 TraesCS2A01G592900 chr6D 81.287 171 27 4 205 373 428601692 428601859 1.660000e-27 134.0
59 TraesCS2A01G592900 chr5B 86.782 174 15 7 205 373 605013960 605014130 1.260000e-43 187.0
60 TraesCS2A01G592900 chr5B 96.330 109 4 0 1755 1863 36890584 36890692 2.110000e-41 180.0
61 TraesCS2A01G592900 chr4A 85.795 176 20 4 200 373 472363585 472363757 5.860000e-42 182.0
62 TraesCS2A01G592900 chr4A 85.556 180 19 6 200 374 681686230 681686053 5.860000e-42 182.0
63 TraesCS2A01G592900 chr4A 90.071 141 11 1 1726 1863 648402484 648402344 2.110000e-41 180.0
64 TraesCS2A01G592900 chr7D 86.275 153 17 3 208 358 436234268 436234418 2.120000e-36 163.0
65 TraesCS2A01G592900 chr4D 84.795 171 16 7 208 372 389517597 389517431 2.120000e-36 163.0
66 TraesCS2A01G592900 chr4D 85.000 160 17 6 219 375 16824208 16824053 3.550000e-34 156.0
67 TraesCS2A01G592900 chr4D 85.065 154 18 4 222 373 328541035 328541185 4.590000e-33 152.0
68 TraesCS2A01G592900 chr4D 82.353 170 24 4 208 373 23005230 23005397 2.760000e-30 143.0
69 TraesCS2A01G592900 chr4D 81.395 172 28 3 205 375 284836740 284836908 1.290000e-28 137.0
70 TraesCS2A01G592900 chr4D 80.347 173 28 4 205 373 161041537 161041707 2.780000e-25 126.0
71 TraesCS2A01G592900 chr4B 85.625 160 16 6 205 361 37566794 37566949 7.630000e-36 161.0
72 TraesCS2A01G592900 chr4B 85.443 158 18 4 213 368 658180648 658180802 2.740000e-35 159.0
73 TraesCS2A01G592900 chr4B 83.234 167 21 5 207 370 614119001 614119163 2.140000e-31 147.0
74 TraesCS2A01G592900 chr1D 82.320 181 23 7 199 373 143346139 143346316 5.940000e-32 148.0
75 TraesCS2A01G592900 chr1D 82.353 170 25 4 208 375 422051585 422051419 2.760000e-30 143.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G592900 chr2A 779807777 779810440 2663 True 4920.0 4920 100.000000 1 2664 1 chr2A.!!$R3 2663
1 TraesCS2A01G592900 chr2A 779674395 779675767 1372 True 448.9 1085 93.108333 444 1735 3 chr2A.!!$R4 1291
2 TraesCS2A01G592900 chr2D 633876067 633878104 2037 False 621.5 1096 86.036000 68 1670 2 chr2D.!!$F2 1602
3 TraesCS2A01G592900 chr7B 642974371 642975012 641 True 712.0 712 86.576000 1755 2417 1 chr7B.!!$R2 662
4 TraesCS2A01G592900 chr7B 642989444 642990084 640 True 689.0 689 85.973000 1755 2417 1 chr7B.!!$R3 662
5 TraesCS2A01G592900 chr7B 643015698 643016339 641 True 689.0 689 85.973000 1755 2417 1 chr7B.!!$R5 662
6 TraesCS2A01G592900 chr7B 643002740 643003381 641 True 684.0 684 85.822000 1755 2417 1 chr7B.!!$R4 662
7 TraesCS2A01G592900 chr2B 776888562 776889497 935 False 410.5 695 84.155500 843 1667 2 chr2B.!!$F3 824

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
577 1268 0.041224 GCACGATGCTGATGCTGATG 60.041 55.0 0.0 0.0 40.96 3.07 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2571 3592 0.034059 AGGGTCTGAACTTGCACTCG 59.966 55.0 0.0 0.0 0.0 4.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.984292 CTCCTGGACACGTACGTAC 57.016 57.895 22.34 15.90 0.00 3.67
31 32 3.342371 CGTACGTACGCGACACAC 58.658 61.111 32.36 1.98 43.14 3.82
32 33 2.471698 CGTACGTACGCGACACACG 61.472 63.158 32.36 18.41 43.14 4.49
33 34 1.154672 GTACGTACGCGACACACGA 60.155 57.895 24.97 11.94 45.77 4.35
34 35 1.116759 GTACGTACGCGACACACGAG 61.117 60.000 24.97 9.39 45.77 4.18
35 36 2.816692 TACGTACGCGACACACGAGC 62.817 60.000 24.97 2.32 45.03 5.03
36 37 2.126965 GTACGCGACACACGAGCT 60.127 61.111 15.93 0.00 45.03 4.09
37 38 1.133253 GTACGCGACACACGAGCTA 59.867 57.895 15.93 0.00 45.03 3.32
38 39 0.856490 GTACGCGACACACGAGCTAG 60.856 60.000 15.93 0.00 45.03 3.42
39 40 2.573341 TACGCGACACACGAGCTAGC 62.573 60.000 15.93 6.62 45.03 3.42
40 41 2.126463 GCGACACACGAGCTAGCA 60.126 61.111 18.83 0.00 45.77 3.49
41 42 2.437343 GCGACACACGAGCTAGCAC 61.437 63.158 18.83 10.18 45.77 4.40
42 43 1.081442 CGACACACGAGCTAGCACA 60.081 57.895 18.83 0.00 45.77 4.57
43 44 1.337817 CGACACACGAGCTAGCACAC 61.338 60.000 18.83 6.99 45.77 3.82
44 45 1.337817 GACACACGAGCTAGCACACG 61.338 60.000 18.83 20.16 0.00 4.49
45 46 1.081442 CACACGAGCTAGCACACGA 60.081 57.895 26.43 0.00 0.00 4.35
46 47 1.081376 ACACGAGCTAGCACACGAC 60.081 57.895 26.43 8.37 0.00 4.34
47 48 1.801913 CACGAGCTAGCACACGACC 60.802 63.158 26.43 5.15 0.00 4.79
48 49 2.202623 CGAGCTAGCACACGACCC 60.203 66.667 18.83 0.00 0.00 4.46
49 50 2.970639 GAGCTAGCACACGACCCA 59.029 61.111 18.83 0.00 0.00 4.51
50 51 1.446272 GAGCTAGCACACGACCCAC 60.446 63.158 18.83 0.00 0.00 4.61
60 61 4.293648 CGACCCACGTGTCCTGCA 62.294 66.667 15.65 0.00 37.22 4.41
61 62 2.347490 GACCCACGTGTCCTGCAT 59.653 61.111 15.65 0.00 0.00 3.96
62 63 2.032528 ACCCACGTGTCCTGCATG 59.967 61.111 15.65 0.00 39.90 4.06
63 64 3.434319 CCCACGTGTCCTGCATGC 61.434 66.667 15.65 11.82 37.62 4.06
64 65 3.792047 CCACGTGTCCTGCATGCG 61.792 66.667 15.65 7.87 37.62 4.73
65 66 4.450122 CACGTGTCCTGCATGCGC 62.450 66.667 14.09 0.00 37.62 6.09
66 67 4.687215 ACGTGTCCTGCATGCGCT 62.687 61.111 14.09 0.00 39.64 5.92
83 84 4.742649 TCGACGCCAGGAGGAGCT 62.743 66.667 0.00 0.00 38.42 4.09
85 86 4.828925 GACGCCAGGAGGAGCTGC 62.829 72.222 0.00 0.00 38.42 5.25
173 185 1.815421 GTACGTACGGAGGCGGAGA 60.815 63.158 21.06 0.00 34.67 3.71
207 231 2.176273 AGCGCCGATCGTACGTACT 61.176 57.895 22.55 13.32 41.07 2.73
208 232 0.875908 AGCGCCGATCGTACGTACTA 60.876 55.000 22.55 13.18 41.07 1.82
209 233 0.719520 GCGCCGATCGTACGTACTAC 60.720 60.000 22.55 12.47 41.07 2.73
210 234 0.855349 CGCCGATCGTACGTACTACT 59.145 55.000 22.55 7.60 0.00 2.57
211 235 1.136775 CGCCGATCGTACGTACTACTC 60.137 57.143 22.55 14.47 0.00 2.59
214 238 2.546795 CCGATCGTACGTACTACTCCCT 60.547 54.545 22.55 0.00 0.00 4.20
215 239 2.728839 CGATCGTACGTACTACTCCCTC 59.271 54.545 22.55 6.02 0.00 4.30
216 240 2.604046 TCGTACGTACTACTCCCTCC 57.396 55.000 22.55 0.00 0.00 4.30
217 241 1.831106 TCGTACGTACTACTCCCTCCA 59.169 52.381 22.55 0.00 0.00 3.86
218 242 2.435805 TCGTACGTACTACTCCCTCCAT 59.564 50.000 22.55 0.00 0.00 3.41
219 243 3.118261 TCGTACGTACTACTCCCTCCATT 60.118 47.826 22.55 0.00 0.00 3.16
220 244 3.249559 CGTACGTACTACTCCCTCCATTC 59.750 52.174 22.55 0.00 0.00 2.67
221 245 3.666345 ACGTACTACTCCCTCCATTCT 57.334 47.619 0.00 0.00 0.00 2.40
222 246 3.978610 ACGTACTACTCCCTCCATTCTT 58.021 45.455 0.00 0.00 0.00 2.52
223 247 5.121380 ACGTACTACTCCCTCCATTCTTA 57.879 43.478 0.00 0.00 0.00 2.10
224 248 5.513233 ACGTACTACTCCCTCCATTCTTAA 58.487 41.667 0.00 0.00 0.00 1.85
225 249 5.954150 ACGTACTACTCCCTCCATTCTTAAA 59.046 40.000 0.00 0.00 0.00 1.52
226 250 6.610425 ACGTACTACTCCCTCCATTCTTAAAT 59.390 38.462 0.00 0.00 0.00 1.40
227 251 7.781693 ACGTACTACTCCCTCCATTCTTAAATA 59.218 37.037 0.00 0.00 0.00 1.40
228 252 8.804204 CGTACTACTCCCTCCATTCTTAAATAT 58.196 37.037 0.00 0.00 0.00 1.28
231 255 9.853177 ACTACTCCCTCCATTCTTAAATATTTG 57.147 33.333 11.05 0.00 0.00 2.32
232 256 9.853177 CTACTCCCTCCATTCTTAAATATTTGT 57.147 33.333 11.05 0.00 0.00 2.83
234 258 9.547279 ACTCCCTCCATTCTTAAATATTTGTTT 57.453 29.630 11.05 0.00 0.00 2.83
371 395 9.939802 AACAAATATTTAGAAACGGAGAGTAGT 57.060 29.630 0.00 0.00 0.00 2.73
376 400 6.882610 TTTAGAAACGGAGAGTAGTACACA 57.117 37.500 2.52 0.00 0.00 3.72
377 401 4.762956 AGAAACGGAGAGTAGTACACAC 57.237 45.455 2.52 0.00 0.00 3.82
378 402 3.188048 AGAAACGGAGAGTAGTACACACG 59.812 47.826 2.52 7.98 0.00 4.49
379 403 1.446907 ACGGAGAGTAGTACACACGG 58.553 55.000 15.22 9.35 0.00 4.94
380 404 1.002430 ACGGAGAGTAGTACACACGGA 59.998 52.381 15.22 0.00 0.00 4.69
381 405 1.396301 CGGAGAGTAGTACACACGGAC 59.604 57.143 2.52 0.00 0.00 4.79
382 406 1.396301 GGAGAGTAGTACACACGGACG 59.604 57.143 2.52 0.00 0.00 4.79
383 407 0.801251 AGAGTAGTACACACGGACGC 59.199 55.000 2.52 0.00 0.00 5.19
384 408 0.179179 GAGTAGTACACACGGACGCC 60.179 60.000 2.52 0.00 0.00 5.68
410 434 2.774587 GCATTCATGCGCGTATGTG 58.225 52.632 31.50 24.88 44.67 3.21
411 435 0.658244 GCATTCATGCGCGTATGTGG 60.658 55.000 31.50 22.99 44.67 4.17
412 436 0.658244 CATTCATGCGCGTATGTGGC 60.658 55.000 31.50 3.73 0.00 5.01
414 438 2.867793 TTCATGCGCGTATGTGGCCT 62.868 55.000 31.50 0.00 0.00 5.19
415 439 1.594021 CATGCGCGTATGTGGCCTA 60.594 57.895 26.42 0.00 0.00 3.93
416 440 1.594293 ATGCGCGTATGTGGCCTAC 60.594 57.895 9.48 0.69 0.00 3.18
417 441 2.202824 GCGCGTATGTGGCCTACA 60.203 61.111 8.43 7.45 44.87 2.74
572 1263 3.503336 GAGCGCACGATGCTGATGC 62.503 63.158 11.47 3.28 44.18 3.91
577 1268 0.041224 GCACGATGCTGATGCTGATG 60.041 55.000 0.00 0.00 40.96 3.07
579 1270 2.143925 CACGATGCTGATGCTGATGAT 58.856 47.619 0.00 0.00 40.48 2.45
617 1313 1.154338 GCGAGCACACGTACGTACT 60.154 57.895 22.34 18.14 35.59 2.73
618 1314 0.727122 GCGAGCACACGTACGTACTT 60.727 55.000 22.34 11.60 35.59 2.24
619 1315 0.972717 CGAGCACACGTACGTACTTG 59.027 55.000 25.53 25.53 0.00 3.16
620 1316 1.398832 CGAGCACACGTACGTACTTGA 60.399 52.381 31.61 0.00 30.88 3.02
621 1317 1.974680 GAGCACACGTACGTACTTGAC 59.025 52.381 31.61 23.31 30.88 3.18
636 1332 2.276868 GACGACGCACATGCATGC 60.277 61.111 26.53 14.55 42.21 4.06
637 1333 3.025975 GACGACGCACATGCATGCA 62.026 57.895 26.53 25.04 46.47 3.96
638 1334 2.313717 GACGACGCACATGCATGCAT 62.314 55.000 27.46 27.46 46.47 3.96
673 1369 3.450457 GGATGGAAATTGTTGGTGGCATA 59.550 43.478 0.00 0.00 0.00 3.14
674 1370 4.081198 GGATGGAAATTGTTGGTGGCATAA 60.081 41.667 0.00 0.00 0.00 1.90
676 1372 3.643320 TGGAAATTGTTGGTGGCATAACA 59.357 39.130 13.91 13.91 35.20 2.41
677 1373 4.101585 TGGAAATTGTTGGTGGCATAACAA 59.898 37.500 25.01 25.01 46.87 2.83
678 1374 4.690280 GGAAATTGTTGGTGGCATAACAAG 59.310 41.667 25.99 0.00 46.27 3.16
679 1375 3.959535 ATTGTTGGTGGCATAACAAGG 57.040 42.857 25.99 0.00 46.27 3.61
681 1377 5.192132 ATTGTTGGTGGCATAACAAGGCC 62.192 47.826 25.99 0.00 46.27 5.19
685 1381 2.274104 GGCATAACAAGGCCCGGA 59.726 61.111 0.73 0.00 44.53 5.14
729 1470 3.624410 GGAATGCCTGCCATTTTCAATTC 59.376 43.478 0.00 0.00 44.02 2.17
734 1475 3.681417 GCCTGCCATTTTCAATTCTTCAC 59.319 43.478 0.00 0.00 0.00 3.18
793 1546 2.107366 CTTCCCAGTCTCCTCCTTCTC 58.893 57.143 0.00 0.00 0.00 2.87
801 1554 2.024369 GTCTCCTCCTTCTCCTTCTCCT 60.024 54.545 0.00 0.00 0.00 3.69
802 1555 2.657459 TCTCCTCCTTCTCCTTCTCCTT 59.343 50.000 0.00 0.00 0.00 3.36
803 1556 3.031013 CTCCTCCTTCTCCTTCTCCTTC 58.969 54.545 0.00 0.00 0.00 3.46
804 1557 2.657459 TCCTCCTTCTCCTTCTCCTTCT 59.343 50.000 0.00 0.00 0.00 2.85
805 1558 3.078305 TCCTCCTTCTCCTTCTCCTTCTT 59.922 47.826 0.00 0.00 0.00 2.52
806 1559 3.450817 CCTCCTTCTCCTTCTCCTTCTTC 59.549 52.174 0.00 0.00 0.00 2.87
807 1560 4.352893 CTCCTTCTCCTTCTCCTTCTTCT 58.647 47.826 0.00 0.00 0.00 2.85
808 1561 4.757692 TCCTTCTCCTTCTCCTTCTTCTT 58.242 43.478 0.00 0.00 0.00 2.52
809 1562 4.775253 TCCTTCTCCTTCTCCTTCTTCTTC 59.225 45.833 0.00 0.00 0.00 2.87
891 1644 0.179094 GGATACCGGCATGACGACAA 60.179 55.000 25.84 7.50 35.47 3.18
926 1689 1.155042 CTCAGCAAGCTCTTGTCCAC 58.845 55.000 10.86 0.00 42.31 4.02
1042 1958 0.995024 CTTCATTCCTCCCACCTGGT 59.005 55.000 0.00 0.00 34.77 4.00
1118 2034 4.477975 GACGACCGTCCGCCAGAG 62.478 72.222 11.13 0.00 39.08 3.35
1121 2037 4.803426 GACCGTCCGCCAGAGCTG 62.803 72.222 0.00 0.00 36.60 4.24
1209 2144 1.202687 TGTGTTCTGCTCACCTTCCTG 60.203 52.381 0.00 0.00 35.25 3.86
1210 2145 1.131638 TGTTCTGCTCACCTTCCTGT 58.868 50.000 0.00 0.00 0.00 4.00
1215 2150 0.819259 TGCTCACCTTCCTGTGCAAC 60.819 55.000 0.00 0.00 37.63 4.17
1231 2168 1.915141 CAACAAGAAGGATGCCACCT 58.085 50.000 0.00 0.00 42.69 4.00
1243 2180 4.675029 CCACCTCCGTTCGCCGTT 62.675 66.667 0.00 0.00 33.66 4.44
1283 2220 3.526430 AGTTTACCTTTACCCTCCCCATC 59.474 47.826 0.00 0.00 0.00 3.51
1293 2230 2.123854 TCCCCATCTCCGACCTCG 60.124 66.667 0.00 0.00 39.44 4.63
1327 2268 3.402681 CAGGCCATCCACCCGAGT 61.403 66.667 5.01 0.00 33.74 4.18
1581 2528 2.202610 CGACATCTTGCTCGCCGA 60.203 61.111 0.00 0.00 0.00 5.54
1647 2594 4.004314 AGGATTATGAGACGATCGACGAT 58.996 43.478 24.34 10.78 45.77 3.73
1649 2596 4.142881 GGATTATGAGACGATCGACGATGA 60.143 45.833 24.34 10.38 45.77 2.92
1656 2603 3.105937 GACGATCGACGATGATGACAAA 58.894 45.455 24.34 0.00 45.77 2.83
1676 2623 3.527641 GCTAGAGCTAGGGCACGT 58.472 61.111 6.66 0.00 41.70 4.49
1677 2624 1.817209 GCTAGAGCTAGGGCACGTT 59.183 57.895 6.66 0.00 41.70 3.99
1678 2625 0.528684 GCTAGAGCTAGGGCACGTTG 60.529 60.000 6.66 0.00 41.70 4.10
1680 2627 1.476891 CTAGAGCTAGGGCACGTTGAA 59.523 52.381 0.00 0.00 41.70 2.69
1681 2628 0.037232 AGAGCTAGGGCACGTTGAAC 60.037 55.000 0.00 0.00 41.70 3.18
1683 2630 0.320771 AGCTAGGGCACGTTGAACAG 60.321 55.000 0.00 0.00 41.70 3.16
1684 2631 0.602905 GCTAGGGCACGTTGAACAGT 60.603 55.000 0.00 0.00 38.54 3.55
1685 2632 1.337447 GCTAGGGCACGTTGAACAGTA 60.337 52.381 0.00 0.00 38.54 2.74
1686 2633 2.868839 GCTAGGGCACGTTGAACAGTAA 60.869 50.000 0.00 0.00 38.54 2.24
1688 2635 2.151202 AGGGCACGTTGAACAGTAATG 58.849 47.619 0.00 0.00 0.00 1.90
1689 2636 1.877443 GGGCACGTTGAACAGTAATGT 59.123 47.619 0.00 0.00 0.00 2.71
1690 2637 2.095919 GGGCACGTTGAACAGTAATGTC 60.096 50.000 0.00 0.00 0.00 3.06
1691 2638 2.546368 GGCACGTTGAACAGTAATGTCA 59.454 45.455 0.00 0.00 0.00 3.58
1695 2642 4.506288 CACGTTGAACAGTAATGTCAGTCA 59.494 41.667 0.00 0.00 0.00 3.41
1697 2644 5.177511 ACGTTGAACAGTAATGTCAGTCATG 59.822 40.000 0.00 0.00 36.81 3.07
1698 2645 5.177511 CGTTGAACAGTAATGTCAGTCATGT 59.822 40.000 0.00 0.00 36.81 3.21
1699 2646 6.593978 GTTGAACAGTAATGTCAGTCATGTC 58.406 40.000 0.00 0.00 36.81 3.06
1702 2723 5.078411 ACAGTAATGTCAGTCATGTCCTC 57.922 43.478 0.00 0.00 36.81 3.71
1706 2727 4.630644 AATGTCAGTCATGTCCTCTGTT 57.369 40.909 0.00 0.00 36.81 3.16
1738 2759 9.933723 AAATTTGGATGAAACTTGAATAAGAGG 57.066 29.630 0.00 0.00 37.36 3.69
1739 2760 7.466746 TTTGGATGAAACTTGAATAAGAGGG 57.533 36.000 0.00 0.00 37.36 4.30
1740 2761 6.139679 TGGATGAAACTTGAATAAGAGGGT 57.860 37.500 0.00 0.00 37.36 4.34
1741 2762 5.945784 TGGATGAAACTTGAATAAGAGGGTG 59.054 40.000 0.00 0.00 37.36 4.61
1742 2763 5.163612 GGATGAAACTTGAATAAGAGGGTGC 60.164 44.000 0.00 0.00 37.36 5.01
1743 2764 4.985538 TGAAACTTGAATAAGAGGGTGCT 58.014 39.130 0.00 0.00 37.36 4.40
1744 2765 5.385198 TGAAACTTGAATAAGAGGGTGCTT 58.615 37.500 0.00 0.00 37.36 3.91
1745 2766 5.241506 TGAAACTTGAATAAGAGGGTGCTTG 59.758 40.000 0.00 0.00 37.36 4.01
1746 2767 3.690460 ACTTGAATAAGAGGGTGCTTGG 58.310 45.455 0.00 0.00 37.36 3.61
1747 2768 3.330701 ACTTGAATAAGAGGGTGCTTGGA 59.669 43.478 0.00 0.00 37.36 3.53
1748 2769 4.018050 ACTTGAATAAGAGGGTGCTTGGAT 60.018 41.667 0.00 0.00 37.36 3.41
1749 2770 4.156455 TGAATAAGAGGGTGCTTGGATC 57.844 45.455 0.00 0.00 0.00 3.36
1750 2771 3.117888 TGAATAAGAGGGTGCTTGGATCC 60.118 47.826 4.20 4.20 0.00 3.36
1751 2772 1.965414 TAAGAGGGTGCTTGGATCCA 58.035 50.000 11.44 11.44 0.00 3.41
1752 2773 1.075601 AAGAGGGTGCTTGGATCCAA 58.924 50.000 25.53 25.53 0.00 3.53
1770 2791 8.383175 TGGATCCAAGTGACTAAAAATAGTCTT 58.617 33.333 13.46 2.30 44.99 3.01
1795 2816 7.524717 TTTTAGAGGCTAAAGTTTCAAGCAT 57.475 32.000 11.51 5.16 38.01 3.79
1796 2817 7.524717 TTTAGAGGCTAAAGTTTCAAGCATT 57.475 32.000 11.51 0.86 38.01 3.56
1838 2859 7.063662 GCTAGAACTAGTCTTGAGGCTAAAAAC 59.936 40.741 0.00 0.00 37.84 2.43
1839 2860 7.068686 AGAACTAGTCTTGAGGCTAAAAACT 57.931 36.000 0.00 0.00 29.66 2.66
1866 2887 8.763984 TTAGTCATAGGAAACCTACTAAGAGG 57.236 38.462 0.00 0.00 39.10 3.69
1867 2888 6.137559 AGTCATAGGAAACCTACTAAGAGGG 58.862 44.000 0.00 0.00 39.10 4.30
1868 2889 5.898397 GTCATAGGAAACCTACTAAGAGGGT 59.102 44.000 0.00 0.00 39.10 4.34
1869 2890 5.897824 TCATAGGAAACCTACTAAGAGGGTG 59.102 44.000 0.00 0.00 39.10 4.61
1870 2891 4.143406 AGGAAACCTACTAAGAGGGTGT 57.857 45.455 0.00 0.00 41.36 4.16
1871 2892 4.500452 AGGAAACCTACTAAGAGGGTGTT 58.500 43.478 0.00 0.00 41.36 3.32
1872 2893 4.912133 AGGAAACCTACTAAGAGGGTGTTT 59.088 41.667 0.00 0.00 41.36 2.83
1873 2894 5.001874 GGAAACCTACTAAGAGGGTGTTTG 58.998 45.833 0.00 0.00 41.36 2.93
1874 2895 4.635699 AACCTACTAAGAGGGTGTTTGG 57.364 45.455 0.00 0.00 41.36 3.28
1875 2896 3.865571 ACCTACTAAGAGGGTGTTTGGA 58.134 45.455 0.00 0.00 41.36 3.53
1876 2897 4.436079 ACCTACTAAGAGGGTGTTTGGAT 58.564 43.478 0.00 0.00 41.36 3.41
1888 2909 4.999311 GGGTGTTTGGATACGTTTTAGTCT 59.001 41.667 0.00 0.00 42.51 3.24
1928 2949 3.685272 GGACTAAAACTTGCTAGCCTCAC 59.315 47.826 13.29 0.00 0.00 3.51
1941 2962 1.105759 GCCTCACCCATGCTTGGATC 61.106 60.000 19.85 0.00 46.92 3.36
1943 2964 0.256752 CTCACCCATGCTTGGATCCA 59.743 55.000 19.85 11.44 46.92 3.41
1954 2975 7.205297 CCATGCTTGGATCCAAAATACTAAAG 58.795 38.462 26.87 13.51 46.92 1.85
2006 3027 0.704076 CCTCCAAACCCTCCAATCCA 59.296 55.000 0.00 0.00 0.00 3.41
2012 3033 3.500343 CAAACCCTCCAATCCAGAACTT 58.500 45.455 0.00 0.00 0.00 2.66
2043 3064 8.095169 GTGTTAAAGGAGAGGAGTTAAATGAGA 58.905 37.037 0.00 0.00 0.00 3.27
2044 3065 8.656806 TGTTAAAGGAGAGGAGTTAAATGAGAA 58.343 33.333 0.00 0.00 0.00 2.87
2051 3072 7.201821 GGAGAGGAGTTAAATGAGAAGAGAGAG 60.202 44.444 0.00 0.00 0.00 3.20
2054 3075 6.379988 AGGAGTTAAATGAGAAGAGAGAGGAC 59.620 42.308 0.00 0.00 0.00 3.85
2060 3081 9.707957 TTAAATGAGAAGAGAGAGGACTAATCT 57.292 33.333 0.00 0.00 0.00 2.40
2063 3084 6.285224 TGAGAAGAGAGAGGACTAATCTACG 58.715 44.000 0.00 0.00 0.00 3.51
2067 3088 6.930667 AGAGAGAGGACTAATCTACGTTTC 57.069 41.667 0.00 0.00 0.00 2.78
2069 3090 7.057894 AGAGAGAGGACTAATCTACGTTTCAT 58.942 38.462 0.00 0.00 0.00 2.57
2075 3096 6.041751 AGGACTAATCTACGTTTCATTAGGGG 59.958 42.308 18.01 3.27 35.31 4.79
2077 3098 7.014615 GGACTAATCTACGTTTCATTAGGGGTA 59.985 40.741 18.01 0.00 35.31 3.69
2129 3150 6.154877 AGACTAGTTTTAGCCCCTCTTTAGTC 59.845 42.308 0.00 0.00 36.42 2.59
2137 3158 0.253327 CCCTCTTTAGTCAGGGGTGC 59.747 60.000 0.00 0.00 45.39 5.01
2155 3176 3.149981 GTGCTTGGAACTTTAGCCTCTT 58.850 45.455 0.00 0.00 34.03 2.85
2159 3180 5.830991 TGCTTGGAACTTTAGCCTCTTAAAA 59.169 36.000 0.00 0.00 34.03 1.52
2162 3183 6.327279 TGGAACTTTAGCCTCTTAAAAAGC 57.673 37.500 0.00 0.00 33.25 3.51
2163 3184 5.243060 TGGAACTTTAGCCTCTTAAAAAGCC 59.757 40.000 0.00 0.00 33.25 4.35
2166 3187 7.361885 GGAACTTTAGCCTCTTAAAAAGCCTAC 60.362 40.741 0.00 0.00 33.25 3.18
2198 3219 7.496263 GTCAGACTAAAATAAGTCCCTTGGATC 59.504 40.741 0.00 0.00 45.86 3.36
2216 3237 4.476846 TGGATCCAAGCACCCTCTAAAATA 59.523 41.667 13.46 0.00 0.00 1.40
2219 3240 5.450818 TCCAAGCACCCTCTAAAATATGT 57.549 39.130 0.00 0.00 0.00 2.29
2225 3246 8.507249 CAAGCACCCTCTAAAATATGTATTAGC 58.493 37.037 0.00 0.00 0.00 3.09
2230 3251 7.037514 ACCCTCTAAAATATGTATTAGCCCTCC 60.038 40.741 0.00 0.00 0.00 4.30
2245 3266 2.713708 GCCCTCCCTCTCCTCATTTAAT 59.286 50.000 0.00 0.00 0.00 1.40
2248 3269 4.662650 CCCTCCCTCTCCTCATTTAATTCT 59.337 45.833 0.00 0.00 0.00 2.40
2252 3273 7.291182 CCTCCCTCTCCTCATTTAATTCTTCTA 59.709 40.741 0.00 0.00 0.00 2.10
2253 3274 8.024145 TCCCTCTCCTCATTTAATTCTTCTAC 57.976 38.462 0.00 0.00 0.00 2.59
2266 3287 9.820229 TTTAATTCTTCTACTTTAACACATGCG 57.180 29.630 0.00 0.00 0.00 4.73
2279 3300 1.399440 CACATGCGAGTTCTGGATTGG 59.601 52.381 0.00 0.00 0.00 3.16
2281 3302 2.092753 ACATGCGAGTTCTGGATTGGAT 60.093 45.455 0.00 0.00 0.00 3.41
2288 3309 3.434309 AGTTCTGGATTGGATGGTTTGG 58.566 45.455 0.00 0.00 0.00 3.28
2299 3320 7.177392 GGATTGGATGGTTTGGAGGATAATAAG 59.823 40.741 0.00 0.00 0.00 1.73
2306 3327 5.885912 GGTTTGGAGGATAATAAGTGCTCAA 59.114 40.000 0.00 0.00 35.96 3.02
2310 3331 9.866655 TTTGGAGGATAATAAGTGCTCAATAAT 57.133 29.630 0.00 0.00 35.96 1.28
2312 3333 9.866655 TGGAGGATAATAAGTGCTCAATAATTT 57.133 29.630 0.00 0.00 35.96 1.82
2351 3372 3.899052 ATTTGGATTCAAGCATGGGTG 57.101 42.857 0.00 0.00 33.98 4.61
2365 3386 0.771127 TGGGTGAGGCTAGCAAGTTT 59.229 50.000 18.24 0.00 0.00 2.66
2392 3413 6.153680 AGTCCCACTACTTTTAGTCATGAGAG 59.846 42.308 0.00 0.00 36.31 3.20
2414 3435 5.067954 AGTAAAACGTATTCAAGCACCCTT 58.932 37.500 0.00 0.00 0.00 3.95
2417 3438 6.394025 AAAACGTATTCAAGCACCCTTTAA 57.606 33.333 0.00 0.00 0.00 1.52
2418 3439 5.622770 AACGTATTCAAGCACCCTTTAAG 57.377 39.130 0.00 0.00 0.00 1.85
2419 3440 4.901868 ACGTATTCAAGCACCCTTTAAGA 58.098 39.130 0.00 0.00 0.00 2.10
2420 3441 5.310451 ACGTATTCAAGCACCCTTTAAGAA 58.690 37.500 0.00 0.00 0.00 2.52
2421 3442 5.944007 ACGTATTCAAGCACCCTTTAAGAAT 59.056 36.000 0.00 0.00 30.74 2.40
2422 3443 6.433093 ACGTATTCAAGCACCCTTTAAGAATT 59.567 34.615 0.00 0.00 29.39 2.17
2423 3444 6.747280 CGTATTCAAGCACCCTTTAAGAATTG 59.253 38.462 0.00 0.00 29.39 2.32
2424 3445 4.519540 TCAAGCACCCTTTAAGAATTGC 57.480 40.909 0.00 0.00 0.00 3.56
2425 3446 3.258123 TCAAGCACCCTTTAAGAATTGCC 59.742 43.478 8.19 0.00 0.00 4.52
2426 3447 3.175438 AGCACCCTTTAAGAATTGCCT 57.825 42.857 8.19 0.00 0.00 4.75
2427 3448 3.092301 AGCACCCTTTAAGAATTGCCTC 58.908 45.455 8.19 0.00 0.00 4.70
2428 3449 2.166459 GCACCCTTTAAGAATTGCCTCC 59.834 50.000 0.00 0.00 0.00 4.30
2429 3450 3.701664 CACCCTTTAAGAATTGCCTCCT 58.298 45.455 0.00 0.00 0.00 3.69
2430 3451 3.445096 CACCCTTTAAGAATTGCCTCCTG 59.555 47.826 0.00 0.00 0.00 3.86
2431 3452 3.076032 ACCCTTTAAGAATTGCCTCCTGT 59.924 43.478 0.00 0.00 0.00 4.00
2432 3453 4.089361 CCCTTTAAGAATTGCCTCCTGTT 58.911 43.478 0.00 0.00 0.00 3.16
2433 3454 5.222254 ACCCTTTAAGAATTGCCTCCTGTTA 60.222 40.000 0.00 0.00 0.00 2.41
2434 3455 5.714806 CCCTTTAAGAATTGCCTCCTGTTAA 59.285 40.000 0.00 0.00 0.00 2.01
2435 3456 6.350194 CCCTTTAAGAATTGCCTCCTGTTAAC 60.350 42.308 0.00 0.00 0.00 2.01
2436 3457 6.434340 CCTTTAAGAATTGCCTCCTGTTAACT 59.566 38.462 7.22 0.00 0.00 2.24
2437 3458 7.039714 CCTTTAAGAATTGCCTCCTGTTAACTT 60.040 37.037 7.22 0.00 0.00 2.66
2438 3459 5.712152 AAGAATTGCCTCCTGTTAACTTG 57.288 39.130 7.22 0.00 0.00 3.16
2439 3460 4.729868 AGAATTGCCTCCTGTTAACTTGT 58.270 39.130 7.22 0.00 0.00 3.16
2440 3461 5.140454 AGAATTGCCTCCTGTTAACTTGTT 58.860 37.500 7.22 0.00 0.00 2.83
2441 3462 5.598417 AGAATTGCCTCCTGTTAACTTGTTT 59.402 36.000 7.22 0.00 0.00 2.83
2442 3463 4.647424 TTGCCTCCTGTTAACTTGTTTG 57.353 40.909 7.22 0.00 0.00 2.93
2443 3464 2.360801 TGCCTCCTGTTAACTTGTTTGC 59.639 45.455 7.22 3.76 0.00 3.68
2444 3465 2.360801 GCCTCCTGTTAACTTGTTTGCA 59.639 45.455 7.22 0.00 0.00 4.08
2445 3466 3.005791 GCCTCCTGTTAACTTGTTTGCAT 59.994 43.478 7.22 0.00 0.00 3.96
2446 3467 4.501400 GCCTCCTGTTAACTTGTTTGCATT 60.501 41.667 7.22 0.00 0.00 3.56
2447 3468 5.222631 CCTCCTGTTAACTTGTTTGCATTC 58.777 41.667 7.22 0.00 0.00 2.67
2448 3469 5.010012 CCTCCTGTTAACTTGTTTGCATTCT 59.990 40.000 7.22 0.00 0.00 2.40
2449 3470 6.461509 CCTCCTGTTAACTTGTTTGCATTCTT 60.462 38.462 7.22 0.00 0.00 2.52
2450 3471 6.503524 TCCTGTTAACTTGTTTGCATTCTTC 58.496 36.000 7.22 0.00 0.00 2.87
2451 3472 6.096141 TCCTGTTAACTTGTTTGCATTCTTCA 59.904 34.615 7.22 0.00 0.00 3.02
2452 3473 6.418819 CCTGTTAACTTGTTTGCATTCTTCAG 59.581 38.462 7.22 0.00 0.00 3.02
2453 3474 6.862209 TGTTAACTTGTTTGCATTCTTCAGT 58.138 32.000 7.22 0.00 0.00 3.41
2454 3475 6.972328 TGTTAACTTGTTTGCATTCTTCAGTC 59.028 34.615 7.22 0.00 0.00 3.51
2455 3476 5.841957 AACTTGTTTGCATTCTTCAGTCT 57.158 34.783 0.00 0.00 0.00 3.24
2456 3477 5.429957 ACTTGTTTGCATTCTTCAGTCTC 57.570 39.130 0.00 0.00 0.00 3.36
2457 3478 5.128919 ACTTGTTTGCATTCTTCAGTCTCT 58.871 37.500 0.00 0.00 0.00 3.10
2458 3479 5.591877 ACTTGTTTGCATTCTTCAGTCTCTT 59.408 36.000 0.00 0.00 0.00 2.85
2459 3480 5.428496 TGTTTGCATTCTTCAGTCTCTTG 57.572 39.130 0.00 0.00 0.00 3.02
2460 3481 4.276678 TGTTTGCATTCTTCAGTCTCTTGG 59.723 41.667 0.00 0.00 0.00 3.61
2461 3482 3.063510 TGCATTCTTCAGTCTCTTGGG 57.936 47.619 0.00 0.00 0.00 4.12
2462 3483 2.373169 TGCATTCTTCAGTCTCTTGGGT 59.627 45.455 0.00 0.00 0.00 4.51
2463 3484 3.006247 GCATTCTTCAGTCTCTTGGGTC 58.994 50.000 0.00 0.00 0.00 4.46
2464 3485 3.604582 CATTCTTCAGTCTCTTGGGTCC 58.395 50.000 0.00 0.00 0.00 4.46
2465 3486 2.398754 TCTTCAGTCTCTTGGGTCCA 57.601 50.000 0.00 0.00 0.00 4.02
2466 3487 2.907892 TCTTCAGTCTCTTGGGTCCAT 58.092 47.619 0.00 0.00 0.00 3.41
2467 3488 2.834549 TCTTCAGTCTCTTGGGTCCATC 59.165 50.000 0.00 0.00 0.00 3.51
2468 3489 2.325661 TCAGTCTCTTGGGTCCATCA 57.674 50.000 0.00 0.00 0.00 3.07
2469 3490 1.902508 TCAGTCTCTTGGGTCCATCAC 59.097 52.381 0.00 0.00 0.00 3.06
2470 3491 1.625315 CAGTCTCTTGGGTCCATCACA 59.375 52.381 0.00 0.00 0.00 3.58
2471 3492 1.905215 AGTCTCTTGGGTCCATCACAG 59.095 52.381 0.00 0.00 0.00 3.66
2472 3493 1.902508 GTCTCTTGGGTCCATCACAGA 59.097 52.381 0.00 0.00 0.00 3.41
2473 3494 2.093764 GTCTCTTGGGTCCATCACAGAG 60.094 54.545 9.16 9.16 0.00 3.35
2474 3495 2.182827 CTCTTGGGTCCATCACAGAGA 58.817 52.381 9.66 0.10 31.29 3.10
2475 3496 2.568956 CTCTTGGGTCCATCACAGAGAA 59.431 50.000 9.66 0.00 31.29 2.87
2476 3497 2.568956 TCTTGGGTCCATCACAGAGAAG 59.431 50.000 0.00 0.00 0.00 2.85
2477 3498 2.325661 TGGGTCCATCACAGAGAAGA 57.674 50.000 0.00 0.00 0.00 2.87
2478 3499 2.619931 TGGGTCCATCACAGAGAAGAA 58.380 47.619 0.00 0.00 0.00 2.52
2479 3500 2.568956 TGGGTCCATCACAGAGAAGAAG 59.431 50.000 0.00 0.00 0.00 2.85
2480 3501 2.626840 GGTCCATCACAGAGAAGAAGC 58.373 52.381 0.00 0.00 0.00 3.86
2481 3502 2.027745 GGTCCATCACAGAGAAGAAGCA 60.028 50.000 0.00 0.00 0.00 3.91
2482 3503 3.370315 GGTCCATCACAGAGAAGAAGCAT 60.370 47.826 0.00 0.00 0.00 3.79
2483 3504 3.870419 GTCCATCACAGAGAAGAAGCATC 59.130 47.826 0.00 0.00 0.00 3.91
2484 3505 3.773667 TCCATCACAGAGAAGAAGCATCT 59.226 43.478 0.00 0.00 37.57 2.90
2485 3506 4.958581 TCCATCACAGAGAAGAAGCATCTA 59.041 41.667 0.00 0.00 33.77 1.98
2486 3507 5.601729 TCCATCACAGAGAAGAAGCATCTAT 59.398 40.000 0.00 0.00 33.77 1.98
2487 3508 6.099413 TCCATCACAGAGAAGAAGCATCTATT 59.901 38.462 0.00 0.00 33.77 1.73
2488 3509 6.766944 CCATCACAGAGAAGAAGCATCTATTT 59.233 38.462 0.00 0.00 33.77 1.40
2489 3510 7.254829 CCATCACAGAGAAGAAGCATCTATTTG 60.255 40.741 0.00 0.00 33.77 2.32
2490 3511 6.111382 TCACAGAGAAGAAGCATCTATTTGG 58.889 40.000 0.00 0.00 33.77 3.28
2491 3512 5.879223 CACAGAGAAGAAGCATCTATTTGGT 59.121 40.000 0.00 0.00 33.77 3.67
2492 3513 6.373774 CACAGAGAAGAAGCATCTATTTGGTT 59.626 38.462 0.00 0.00 39.86 3.67
2514 3535 9.096823 TGGTTCTCCAAAGTTAACTTAGATAGA 57.903 33.333 20.83 16.70 41.25 1.98
2515 3536 9.589111 GGTTCTCCAAAGTTAACTTAGATAGAG 57.411 37.037 20.83 19.02 34.61 2.43
2516 3537 9.089601 GTTCTCCAAAGTTAACTTAGATAGAGC 57.910 37.037 20.83 17.01 34.61 4.09
2517 3538 8.362464 TCTCCAAAGTTAACTTAGATAGAGCA 57.638 34.615 20.83 9.70 34.61 4.26
2518 3539 8.982723 TCTCCAAAGTTAACTTAGATAGAGCAT 58.017 33.333 20.83 0.00 34.61 3.79
2519 3540 9.606631 CTCCAAAGTTAACTTAGATAGAGCATT 57.393 33.333 20.83 0.00 34.61 3.56
2520 3541 9.959721 TCCAAAGTTAACTTAGATAGAGCATTT 57.040 29.630 20.83 0.00 34.61 2.32
2521 3542 9.994432 CCAAAGTTAACTTAGATAGAGCATTTG 57.006 33.333 20.83 10.35 34.61 2.32
2538 3559 6.694447 AGCATTTGTTAGCTCATGATTTTGT 58.306 32.000 0.00 0.00 36.00 2.83
2539 3560 6.810182 AGCATTTGTTAGCTCATGATTTTGTC 59.190 34.615 0.00 0.00 36.00 3.18
2540 3561 6.587226 GCATTTGTTAGCTCATGATTTTGTCA 59.413 34.615 0.00 0.00 42.06 3.58
2541 3562 7.411157 GCATTTGTTAGCTCATGATTTTGTCAC 60.411 37.037 0.00 0.00 40.28 3.67
2542 3563 5.281693 TGTTAGCTCATGATTTTGTCACG 57.718 39.130 0.00 0.00 40.28 4.35
2543 3564 2.907910 AGCTCATGATTTTGTCACGC 57.092 45.000 0.00 0.00 40.28 5.34
2544 3565 1.470098 AGCTCATGATTTTGTCACGCC 59.530 47.619 0.00 0.00 40.28 5.68
2545 3566 1.470098 GCTCATGATTTTGTCACGCCT 59.530 47.619 0.00 0.00 40.28 5.52
2546 3567 2.730090 GCTCATGATTTTGTCACGCCTG 60.730 50.000 0.00 0.00 40.28 4.85
2547 3568 1.199789 TCATGATTTTGTCACGCCTGC 59.800 47.619 0.00 0.00 40.28 4.85
2548 3569 0.527565 ATGATTTTGTCACGCCTGCC 59.472 50.000 0.00 0.00 40.28 4.85
2549 3570 1.154225 GATTTTGTCACGCCTGCCG 60.154 57.895 0.00 0.00 44.21 5.69
2550 3571 1.573829 GATTTTGTCACGCCTGCCGA 61.574 55.000 0.00 0.00 41.02 5.54
2551 3572 0.960364 ATTTTGTCACGCCTGCCGAT 60.960 50.000 0.00 0.00 41.02 4.18
2552 3573 1.851021 TTTTGTCACGCCTGCCGATG 61.851 55.000 0.00 0.00 41.02 3.84
2563 3584 2.211375 TGCCGATGCATCTACAGGT 58.789 52.632 23.73 0.00 44.23 4.00
2564 3585 0.179076 TGCCGATGCATCTACAGGTG 60.179 55.000 23.73 6.81 44.23 4.00
2565 3586 0.104855 GCCGATGCATCTACAGGTGA 59.895 55.000 23.73 0.00 37.47 4.02
2566 3587 1.858091 CCGATGCATCTACAGGTGAC 58.142 55.000 23.73 0.00 0.00 3.67
2567 3588 1.410517 CCGATGCATCTACAGGTGACT 59.589 52.381 23.73 0.00 46.44 3.41
2578 3599 2.124293 AGGTGACTGAACGAGTGCA 58.876 52.632 0.00 0.00 41.13 4.57
2579 3600 0.464036 AGGTGACTGAACGAGTGCAA 59.536 50.000 0.00 0.00 41.13 4.08
2580 3601 0.861837 GGTGACTGAACGAGTGCAAG 59.138 55.000 0.00 0.00 33.83 4.01
2581 3602 1.571919 GTGACTGAACGAGTGCAAGT 58.428 50.000 0.00 0.00 33.83 3.16
2582 3603 1.933853 GTGACTGAACGAGTGCAAGTT 59.066 47.619 3.53 3.53 33.83 2.66
2583 3604 2.033662 GTGACTGAACGAGTGCAAGTTC 60.034 50.000 18.45 18.45 44.93 3.01
2587 3608 2.932167 GAACGAGTGCAAGTTCAGAC 57.068 50.000 19.65 0.84 44.32 3.51
2588 3609 1.527311 GAACGAGTGCAAGTTCAGACC 59.473 52.381 19.65 0.56 44.32 3.85
2589 3610 0.249911 ACGAGTGCAAGTTCAGACCC 60.250 55.000 0.00 0.00 0.00 4.46
2590 3611 0.034059 CGAGTGCAAGTTCAGACCCT 59.966 55.000 0.00 0.00 0.00 4.34
2591 3612 1.517242 GAGTGCAAGTTCAGACCCTG 58.483 55.000 0.00 0.00 0.00 4.45
2592 3613 1.070758 GAGTGCAAGTTCAGACCCTGA 59.929 52.381 0.00 0.00 38.87 3.86
2593 3614 1.490490 AGTGCAAGTTCAGACCCTGAA 59.510 47.619 5.38 5.38 46.50 3.02
2602 3623 3.753294 TCAGACCCTGAAACTCTGAAC 57.247 47.619 0.00 0.00 37.97 3.18
2603 3624 3.309296 TCAGACCCTGAAACTCTGAACT 58.691 45.455 0.00 0.00 37.97 3.01
2604 3625 3.322254 TCAGACCCTGAAACTCTGAACTC 59.678 47.826 0.00 0.00 37.97 3.01
2605 3626 2.297597 AGACCCTGAAACTCTGAACTCG 59.702 50.000 0.00 0.00 0.00 4.18
2606 3627 1.270358 ACCCTGAAACTCTGAACTCGC 60.270 52.381 0.00 0.00 0.00 5.03
2607 3628 1.270305 CCCTGAAACTCTGAACTCGCA 60.270 52.381 0.00 0.00 0.00 5.10
2608 3629 2.483876 CCTGAAACTCTGAACTCGCAA 58.516 47.619 0.00 0.00 0.00 4.85
2609 3630 2.221981 CCTGAAACTCTGAACTCGCAAC 59.778 50.000 0.00 0.00 0.00 4.17
2610 3631 2.866156 CTGAAACTCTGAACTCGCAACA 59.134 45.455 0.00 0.00 0.00 3.33
2611 3632 2.866156 TGAAACTCTGAACTCGCAACAG 59.134 45.455 0.00 0.00 0.00 3.16
2612 3633 1.221414 AACTCTGAACTCGCAACAGC 58.779 50.000 0.00 0.00 0.00 4.40
2613 3634 0.601311 ACTCTGAACTCGCAACAGCC 60.601 55.000 0.00 0.00 0.00 4.85
2614 3635 0.320247 CTCTGAACTCGCAACAGCCT 60.320 55.000 0.00 0.00 0.00 4.58
2615 3636 0.601046 TCTGAACTCGCAACAGCCTG 60.601 55.000 0.00 0.00 0.00 4.85
2616 3637 0.882042 CTGAACTCGCAACAGCCTGT 60.882 55.000 0.00 0.00 0.00 4.00
2617 3638 0.463654 TGAACTCGCAACAGCCTGTT 60.464 50.000 3.74 3.74 42.08 3.16
2624 3645 4.779475 AACAGCCTGTTGGACTCG 57.221 55.556 9.77 0.00 39.45 4.18
2625 3646 1.071471 AACAGCCTGTTGGACTCGG 59.929 57.895 9.77 0.00 39.45 4.63
2626 3647 2.046892 CAGCCTGTTGGACTCGGG 60.047 66.667 0.00 0.00 34.57 5.14
2629 3650 2.750350 CCTGTTGGACTCGGGCTT 59.250 61.111 0.00 0.00 34.57 4.35
2630 3651 1.672356 CCTGTTGGACTCGGGCTTG 60.672 63.158 0.00 0.00 34.57 4.01
2631 3652 2.281484 TGTTGGACTCGGGCTTGC 60.281 61.111 0.00 0.00 0.00 4.01
2632 3653 2.281484 GTTGGACTCGGGCTTGCA 60.281 61.111 0.00 0.00 0.00 4.08
2633 3654 2.032528 TTGGACTCGGGCTTGCAG 59.967 61.111 0.00 0.00 0.00 4.41
2634 3655 4.704833 TGGACTCGGGCTTGCAGC 62.705 66.667 0.11 0.11 41.46 5.25
2643 3664 4.731503 GCTTGCAGCGCTCACGTG 62.732 66.667 7.13 9.94 42.83 4.49
2644 3665 3.341043 CTTGCAGCGCTCACGTGT 61.341 61.111 16.51 0.00 42.83 4.49
2645 3666 3.568907 CTTGCAGCGCTCACGTGTG 62.569 63.158 16.51 14.71 42.83 3.82
2646 3667 4.889856 TGCAGCGCTCACGTGTGT 62.890 61.111 16.51 0.00 42.83 3.72
2648 3669 2.961721 CAGCGCTCACGTGTGTGT 60.962 61.111 26.36 14.13 46.49 3.72
2649 3670 2.961721 AGCGCTCACGTGTGTGTG 60.962 61.111 26.36 19.11 46.49 3.82
2653 3674 2.584970 CTCACGTGTGTGTGCCGT 60.585 61.111 16.51 0.00 46.49 5.68
2655 3676 3.935872 CACGTGTGTGTGCCGTGG 61.936 66.667 7.58 0.00 45.97 4.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.095935 CGTACGTACGTGTCCAGGAG 59.904 60.000 33.95 7.63 44.13 3.69
1 2 2.161831 CGTACGTACGTGTCCAGGA 58.838 57.895 33.95 5.88 44.13 3.86
2 3 4.751539 CGTACGTACGTGTCCAGG 57.248 61.111 33.95 12.32 44.13 4.45
15 16 1.116759 CTCGTGTGTCGCGTACGTAC 61.117 60.000 17.90 15.90 41.18 3.67
16 17 1.130411 CTCGTGTGTCGCGTACGTA 59.870 57.895 17.90 2.47 41.18 3.57
17 18 2.127496 CTCGTGTGTCGCGTACGT 60.127 61.111 17.90 0.00 41.18 3.57
18 19 2.552918 TAGCTCGTGTGTCGCGTACG 62.553 60.000 11.84 11.84 38.57 3.67
19 20 0.856490 CTAGCTCGTGTGTCGCGTAC 60.856 60.000 5.77 7.70 38.57 3.67
20 21 1.422662 CTAGCTCGTGTGTCGCGTA 59.577 57.895 5.77 0.00 38.57 4.42
21 22 2.176055 CTAGCTCGTGTGTCGCGT 59.824 61.111 5.77 0.00 38.57 6.01
22 23 3.241059 GCTAGCTCGTGTGTCGCG 61.241 66.667 7.70 0.00 39.67 5.87
23 24 2.126463 TGCTAGCTCGTGTGTCGC 60.126 61.111 17.23 0.00 39.67 5.19
24 25 1.081442 TGTGCTAGCTCGTGTGTCG 60.081 57.895 17.23 0.00 41.41 4.35
25 26 1.337817 CGTGTGCTAGCTCGTGTGTC 61.338 60.000 17.23 0.09 0.00 3.67
26 27 1.371758 CGTGTGCTAGCTCGTGTGT 60.372 57.895 17.23 0.00 0.00 3.72
27 28 1.081442 TCGTGTGCTAGCTCGTGTG 60.081 57.895 17.23 3.90 0.00 3.82
28 29 1.081376 GTCGTGTGCTAGCTCGTGT 60.081 57.895 17.23 0.00 0.00 4.49
29 30 1.801913 GGTCGTGTGCTAGCTCGTG 60.802 63.158 17.23 8.86 0.00 4.35
30 31 2.567049 GGTCGTGTGCTAGCTCGT 59.433 61.111 17.23 0.00 0.00 4.18
31 32 2.202623 GGGTCGTGTGCTAGCTCG 60.203 66.667 17.23 16.94 0.00 5.03
32 33 1.446272 GTGGGTCGTGTGCTAGCTC 60.446 63.158 17.23 13.38 0.00 4.09
33 34 2.657237 GTGGGTCGTGTGCTAGCT 59.343 61.111 17.23 0.00 0.00 3.32
34 35 2.809601 CGTGGGTCGTGTGCTAGC 60.810 66.667 8.10 8.10 34.52 3.42
43 44 3.589654 ATGCAGGACACGTGGGTCG 62.590 63.158 21.57 6.72 46.00 4.79
44 45 2.034879 CATGCAGGACACGTGGGTC 61.035 63.158 21.57 9.15 37.06 4.46
45 46 2.032528 CATGCAGGACACGTGGGT 59.967 61.111 21.57 0.00 0.00 4.51
46 47 3.434319 GCATGCAGGACACGTGGG 61.434 66.667 21.57 7.44 0.00 4.61
47 48 3.792047 CGCATGCAGGACACGTGG 61.792 66.667 21.57 2.48 0.00 4.94
48 49 4.450122 GCGCATGCAGGACACGTG 62.450 66.667 19.57 15.48 42.15 4.49
49 50 4.687215 AGCGCATGCAGGACACGT 62.687 61.111 19.57 0.00 46.23 4.49
50 51 3.857854 GAGCGCATGCAGGACACG 61.858 66.667 19.57 0.00 46.23 4.49
51 52 3.857854 CGAGCGCATGCAGGACAC 61.858 66.667 19.57 1.61 46.23 3.67
52 53 4.067913 TCGAGCGCATGCAGGACA 62.068 61.111 19.57 0.00 46.23 4.02
53 54 3.558411 GTCGAGCGCATGCAGGAC 61.558 66.667 19.57 14.12 46.23 3.85
65 66 4.200283 GCTCCTCCTGGCGTCGAG 62.200 72.222 0.00 0.00 0.00 4.04
66 67 4.742649 AGCTCCTCCTGGCGTCGA 62.743 66.667 0.00 0.00 0.00 4.20
73 74 4.527583 GCTCGGCAGCTCCTCCTG 62.528 72.222 0.00 0.00 43.09 3.86
108 113 0.453615 GCAGATATCTCGCTCGGTCG 60.454 60.000 15.63 0.00 0.00 4.79
189 201 0.875908 TAGTACGTACGATCGGCGCT 60.876 55.000 24.41 19.93 46.04 5.92
208 232 9.547279 AAACAAATATTTAAGAATGGAGGGAGT 57.453 29.630 0.00 0.00 0.00 3.85
345 369 9.939802 ACTACTCTCCGTTTCTAAATATTTGTT 57.060 29.630 11.05 0.00 0.00 2.83
350 374 9.182214 TGTGTACTACTCTCCGTTTCTAAATAT 57.818 33.333 0.00 0.00 0.00 1.28
351 375 8.454106 GTGTGTACTACTCTCCGTTTCTAAATA 58.546 37.037 0.00 0.00 0.00 1.40
352 376 7.311408 GTGTGTACTACTCTCCGTTTCTAAAT 58.689 38.462 0.00 0.00 0.00 1.40
353 377 6.566564 CGTGTGTACTACTCTCCGTTTCTAAA 60.567 42.308 0.00 0.00 0.00 1.85
354 378 5.106948 CGTGTGTACTACTCTCCGTTTCTAA 60.107 44.000 0.00 0.00 0.00 2.10
355 379 4.389992 CGTGTGTACTACTCTCCGTTTCTA 59.610 45.833 0.00 0.00 0.00 2.10
356 380 3.188048 CGTGTGTACTACTCTCCGTTTCT 59.812 47.826 0.00 0.00 0.00 2.52
357 381 3.486584 CGTGTGTACTACTCTCCGTTTC 58.513 50.000 0.00 0.00 0.00 2.78
358 382 2.227388 CCGTGTGTACTACTCTCCGTTT 59.773 50.000 0.00 0.00 0.00 3.60
359 383 1.808945 CCGTGTGTACTACTCTCCGTT 59.191 52.381 0.00 0.00 0.00 4.44
360 384 1.002430 TCCGTGTGTACTACTCTCCGT 59.998 52.381 0.00 0.00 0.00 4.69
361 385 1.396301 GTCCGTGTGTACTACTCTCCG 59.604 57.143 0.00 0.00 0.00 4.63
362 386 1.396301 CGTCCGTGTGTACTACTCTCC 59.604 57.143 0.00 0.00 0.00 3.71
363 387 1.202009 GCGTCCGTGTGTACTACTCTC 60.202 57.143 0.00 0.00 0.00 3.20
364 388 0.801251 GCGTCCGTGTGTACTACTCT 59.199 55.000 0.00 0.00 0.00 3.24
365 389 0.179179 GGCGTCCGTGTGTACTACTC 60.179 60.000 0.00 0.00 0.00 2.59
366 390 1.878775 GGCGTCCGTGTGTACTACT 59.121 57.895 0.00 0.00 0.00 2.57
367 391 1.512734 CGGCGTCCGTGTGTACTAC 60.513 63.158 9.69 0.00 42.73 2.73
368 392 2.869646 CGGCGTCCGTGTGTACTA 59.130 61.111 9.69 0.00 42.73 1.82
378 402 3.340953 AATGCAATGCACGGCGTCC 62.341 57.895 11.23 0.00 43.04 4.79
379 403 1.869132 GAATGCAATGCACGGCGTC 60.869 57.895 11.23 6.01 43.04 5.19
380 404 1.936436 ATGAATGCAATGCACGGCGT 61.936 50.000 11.23 6.77 43.04 5.68
381 405 1.226745 ATGAATGCAATGCACGGCG 60.227 52.632 11.23 4.80 43.04 6.46
382 406 2.293765 CATGAATGCAATGCACGGC 58.706 52.632 11.23 3.28 43.04 5.68
408 432 2.434359 GCTCCGTGTGTAGGCCAC 60.434 66.667 5.01 1.31 44.78 5.01
409 433 3.702048 GGCTCCGTGTGTAGGCCA 61.702 66.667 5.01 0.00 42.08 5.36
410 434 4.814294 CGGCTCCGTGTGTAGGCC 62.814 72.222 0.00 0.00 39.43 5.19
411 435 2.573609 AATCGGCTCCGTGTGTAGGC 62.574 60.000 8.28 0.00 40.74 3.93
412 436 0.108329 AAATCGGCTCCGTGTGTAGG 60.108 55.000 8.28 0.00 40.74 3.18
414 438 0.390603 CCAAATCGGCTCCGTGTGTA 60.391 55.000 8.28 0.00 40.74 2.90
415 439 1.671054 CCAAATCGGCTCCGTGTGT 60.671 57.895 8.28 0.00 40.74 3.72
416 440 3.177600 CCAAATCGGCTCCGTGTG 58.822 61.111 8.28 5.19 40.74 3.82
451 1124 2.344203 CGACGCTCTTCTCCCCTGT 61.344 63.158 0.00 0.00 0.00 4.00
572 1263 3.073678 TCGTTGGTTGGTTCATCATCAG 58.926 45.455 0.00 0.00 0.00 2.90
577 1268 3.216147 CCATTCGTTGGTTGGTTCATC 57.784 47.619 0.00 0.00 40.99 2.92
613 1309 0.093026 GCATGTGCGTCGTCAAGTAC 59.907 55.000 0.00 0.00 0.00 2.73
617 1313 1.496835 CATGCATGTGCGTCGTCAA 59.503 52.632 18.91 0.00 45.83 3.18
618 1314 3.025975 GCATGCATGTGCGTCGTCA 62.026 57.895 26.79 0.00 45.83 4.35
619 1315 2.276868 GCATGCATGTGCGTCGTC 60.277 61.111 26.79 4.79 45.83 4.20
636 1332 3.161866 TCCATCCATTCCATCATGCATG 58.838 45.455 21.07 21.07 0.00 4.06
637 1333 3.536075 TCCATCCATTCCATCATGCAT 57.464 42.857 0.00 0.00 0.00 3.96
638 1334 3.315880 TTCCATCCATTCCATCATGCA 57.684 42.857 0.00 0.00 0.00 3.96
639 1335 4.884668 ATTTCCATCCATTCCATCATGC 57.115 40.909 0.00 0.00 0.00 4.06
640 1336 6.169557 ACAATTTCCATCCATTCCATCATG 57.830 37.500 0.00 0.00 0.00 3.07
641 1337 6.408776 CCAACAATTTCCATCCATTCCATCAT 60.409 38.462 0.00 0.00 0.00 2.45
642 1338 5.104859 CCAACAATTTCCATCCATTCCATCA 60.105 40.000 0.00 0.00 0.00 3.07
643 1339 5.104817 ACCAACAATTTCCATCCATTCCATC 60.105 40.000 0.00 0.00 0.00 3.51
644 1340 4.784300 ACCAACAATTTCCATCCATTCCAT 59.216 37.500 0.00 0.00 0.00 3.41
645 1341 4.020396 CACCAACAATTTCCATCCATTCCA 60.020 41.667 0.00 0.00 0.00 3.53
646 1342 4.506758 CACCAACAATTTCCATCCATTCC 58.493 43.478 0.00 0.00 0.00 3.01
647 1343 4.506758 CCACCAACAATTTCCATCCATTC 58.493 43.478 0.00 0.00 0.00 2.67
648 1344 3.307621 GCCACCAACAATTTCCATCCATT 60.308 43.478 0.00 0.00 0.00 3.16
681 1377 0.811616 GCTCTAACACATGCCTCCGG 60.812 60.000 0.00 0.00 0.00 5.14
683 1379 1.065854 ACTGCTCTAACACATGCCTCC 60.066 52.381 0.00 0.00 0.00 4.30
684 1380 2.393271 ACTGCTCTAACACATGCCTC 57.607 50.000 0.00 0.00 0.00 4.70
685 1381 2.816087 CAAACTGCTCTAACACATGCCT 59.184 45.455 0.00 0.00 0.00 4.75
729 1470 4.722700 CTGTGGGCCGGGGTGAAG 62.723 72.222 2.18 0.00 0.00 3.02
793 1546 2.563179 TCCGTGAAGAAGAAGGAGAAGG 59.437 50.000 0.00 0.00 0.00 3.46
801 1554 3.031736 CCCTCCTATCCGTGAAGAAGAA 58.968 50.000 0.00 0.00 0.00 2.52
802 1555 2.243994 TCCCTCCTATCCGTGAAGAAGA 59.756 50.000 0.00 0.00 0.00 2.87
803 1556 2.625790 CTCCCTCCTATCCGTGAAGAAG 59.374 54.545 0.00 0.00 0.00 2.85
804 1557 2.667470 CTCCCTCCTATCCGTGAAGAA 58.333 52.381 0.00 0.00 0.00 2.52
805 1558 1.754555 GCTCCCTCCTATCCGTGAAGA 60.755 57.143 0.00 0.00 0.00 2.87
806 1559 0.676736 GCTCCCTCCTATCCGTGAAG 59.323 60.000 0.00 0.00 0.00 3.02
807 1560 0.759436 GGCTCCCTCCTATCCGTGAA 60.759 60.000 0.00 0.00 0.00 3.18
808 1561 1.152525 GGCTCCCTCCTATCCGTGA 60.153 63.158 0.00 0.00 0.00 4.35
809 1562 2.210711 GGGCTCCCTCCTATCCGTG 61.211 68.421 0.00 0.00 0.00 4.94
872 1625 0.179094 TTGTCGTCATGCCGGTATCC 60.179 55.000 0.34 0.00 0.00 2.59
884 1637 0.674895 AGAATGGCAGCCTTGTCGTC 60.675 55.000 14.15 0.62 0.00 4.20
926 1689 2.513204 CATGGTCGCTGCAGGGAG 60.513 66.667 31.54 17.21 37.69 4.30
1114 2030 2.183811 CCGACTGAGCCAGCTCTG 59.816 66.667 20.88 20.88 43.12 3.35
1115 2031 3.768922 GCCGACTGAGCCAGCTCT 61.769 66.667 19.71 1.06 43.12 4.09
1116 2032 4.074526 TGCCGACTGAGCCAGCTC 62.075 66.667 12.78 12.78 43.01 4.09
1117 2033 4.385405 GTGCCGACTGAGCCAGCT 62.385 66.667 0.00 0.00 34.37 4.24
1152 2087 3.764466 CGAGGGCGAGCTCCAAGT 61.764 66.667 8.47 0.00 40.82 3.16
1209 2144 0.961019 TGGCATCCTTCTTGTTGCAC 59.039 50.000 0.00 0.00 36.82 4.57
1210 2145 0.961019 GTGGCATCCTTCTTGTTGCA 59.039 50.000 0.00 0.00 36.82 4.08
1215 2150 0.745845 CGGAGGTGGCATCCTTCTTG 60.746 60.000 9.50 0.00 38.02 3.02
1253 2190 5.164897 AGGGTAAAGGTAAACTAAGGGACA 58.835 41.667 0.00 0.00 0.00 4.02
1254 2191 5.338708 GGAGGGTAAAGGTAAACTAAGGGAC 60.339 48.000 0.00 0.00 0.00 4.46
1255 2192 4.784838 GGAGGGTAAAGGTAAACTAAGGGA 59.215 45.833 0.00 0.00 0.00 4.20
1256 2193 4.080129 GGGAGGGTAAAGGTAAACTAAGGG 60.080 50.000 0.00 0.00 0.00 3.95
1257 2194 4.080129 GGGGAGGGTAAAGGTAAACTAAGG 60.080 50.000 0.00 0.00 0.00 2.69
1258 2195 4.537288 TGGGGAGGGTAAAGGTAAACTAAG 59.463 45.833 0.00 0.00 0.00 2.18
1406 2347 1.199327 CTTGACGTACTTGCTCTCCGA 59.801 52.381 0.00 0.00 0.00 4.55
1533 2480 4.814294 CGTAGGTCACGCCCAGGC 62.814 72.222 0.00 0.00 45.03 4.85
1544 2491 0.815734 CCGTCATTGTCCTCGTAGGT 59.184 55.000 1.60 0.00 36.53 3.08
1581 2528 3.254035 ATGTCCCAGGGGAGGTCGT 62.254 63.158 7.47 0.00 46.16 4.34
1674 2621 5.177511 ACATGACTGACATTACTGTTCAACG 59.822 40.000 0.00 0.00 37.07 4.10
1675 2622 6.347725 GGACATGACTGACATTACTGTTCAAC 60.348 42.308 0.00 0.00 37.07 3.18
1676 2623 5.700832 GGACATGACTGACATTACTGTTCAA 59.299 40.000 0.00 0.00 37.07 2.69
1677 2624 5.012046 AGGACATGACTGACATTACTGTTCA 59.988 40.000 0.00 0.00 37.07 3.18
1678 2625 5.482908 AGGACATGACTGACATTACTGTTC 58.517 41.667 0.00 0.00 37.07 3.18
1680 2627 4.774726 AGAGGACATGACTGACATTACTGT 59.225 41.667 0.00 0.00 37.07 3.55
1681 2628 5.107824 CAGAGGACATGACTGACATTACTG 58.892 45.833 0.00 0.00 37.07 2.74
1683 2630 5.078411 ACAGAGGACATGACTGACATTAC 57.922 43.478 0.00 0.00 37.07 1.89
1684 2631 5.012046 ACAACAGAGGACATGACTGACATTA 59.988 40.000 0.00 0.00 37.07 1.90
1685 2632 4.202398 ACAACAGAGGACATGACTGACATT 60.202 41.667 0.00 0.00 37.07 2.71
1686 2633 3.326006 ACAACAGAGGACATGACTGACAT 59.674 43.478 0.00 0.00 40.17 3.06
1688 2635 3.062763 CACAACAGAGGACATGACTGAC 58.937 50.000 0.00 0.00 35.85 3.51
1689 2636 2.965147 TCACAACAGAGGACATGACTGA 59.035 45.455 0.00 0.00 35.85 3.41
1690 2637 3.006217 TCTCACAACAGAGGACATGACTG 59.994 47.826 0.00 6.10 36.30 3.51
1691 2638 3.234353 TCTCACAACAGAGGACATGACT 58.766 45.455 0.00 0.00 36.30 3.41
1695 2642 5.242393 CCAAATTTCTCACAACAGAGGACAT 59.758 40.000 0.00 0.00 36.30 3.06
1697 2644 4.821805 TCCAAATTTCTCACAACAGAGGAC 59.178 41.667 0.00 0.00 36.30 3.85
1698 2645 5.047566 TCCAAATTTCTCACAACAGAGGA 57.952 39.130 0.00 0.00 36.30 3.71
1699 2646 5.474532 TCATCCAAATTTCTCACAACAGAGG 59.525 40.000 0.00 0.00 36.30 3.69
1702 2723 7.205297 AGTTTCATCCAAATTTCTCACAACAG 58.795 34.615 0.00 0.00 0.00 3.16
1706 2727 7.345422 TCAAGTTTCATCCAAATTTCTCACA 57.655 32.000 0.00 0.00 0.00 3.58
1735 2756 3.181526 CTTGGATCCAAGCACCCTC 57.818 57.895 35.47 0.00 45.38 4.30
1742 2763 8.669243 GACTATTTTTAGTCACTTGGATCCAAG 58.331 37.037 40.81 40.81 45.02 3.61
1743 2764 8.383175 AGACTATTTTTAGTCACTTGGATCCAA 58.617 33.333 25.53 25.53 46.62 3.53
1744 2765 7.918076 AGACTATTTTTAGTCACTTGGATCCA 58.082 34.615 11.44 11.44 46.62 3.41
1745 2766 8.794335 AAGACTATTTTTAGTCACTTGGATCC 57.206 34.615 4.20 4.20 46.62 3.36
1770 2791 7.341445 TGCTTGAAACTTTAGCCTCTAAAAA 57.659 32.000 0.00 0.00 34.03 1.94
1788 2809 5.337894 CCTCTCTTTAGTCAGGAATGCTTGA 60.338 44.000 0.00 0.00 0.00 3.02
1792 2813 3.118445 AGCCTCTCTTTAGTCAGGAATGC 60.118 47.826 0.00 0.00 0.00 3.56
1795 2816 5.194473 TCTAGCCTCTCTTTAGTCAGGAA 57.806 43.478 0.00 0.00 0.00 3.36
1796 2817 4.864483 TCTAGCCTCTCTTTAGTCAGGA 57.136 45.455 0.00 0.00 0.00 3.86
1847 2868 5.851418 ACACCCTCTTAGTAGGTTTCCTAT 58.149 41.667 0.00 0.00 38.48 2.57
1848 2869 5.280998 ACACCCTCTTAGTAGGTTTCCTA 57.719 43.478 0.00 0.00 34.61 2.94
1849 2870 4.143406 ACACCCTCTTAGTAGGTTTCCT 57.857 45.455 0.00 0.00 37.71 3.36
1854 2875 3.865571 TCCAAACACCCTCTTAGTAGGT 58.134 45.455 0.00 0.00 34.56 3.08
1862 2883 3.782656 AAACGTATCCAAACACCCTCT 57.217 42.857 0.00 0.00 0.00 3.69
1863 2884 4.999311 ACTAAAACGTATCCAAACACCCTC 59.001 41.667 0.00 0.00 0.00 4.30
1864 2885 4.976864 ACTAAAACGTATCCAAACACCCT 58.023 39.130 0.00 0.00 0.00 4.34
1865 2886 4.999311 AGACTAAAACGTATCCAAACACCC 59.001 41.667 0.00 0.00 0.00 4.61
1866 2887 5.697633 TGAGACTAAAACGTATCCAAACACC 59.302 40.000 0.00 0.00 0.00 4.16
1867 2888 6.774354 TGAGACTAAAACGTATCCAAACAC 57.226 37.500 0.00 0.00 0.00 3.32
1868 2889 7.117236 GTCATGAGACTAAAACGTATCCAAACA 59.883 37.037 0.00 0.00 41.64 2.83
1869 2890 7.453838 GTCATGAGACTAAAACGTATCCAAAC 58.546 38.462 0.00 0.00 41.64 2.93
1870 2891 7.591006 GTCATGAGACTAAAACGTATCCAAA 57.409 36.000 0.00 0.00 41.64 3.28
1888 2909 7.786046 TTAGTCCCACTACTTTTAGTCATGA 57.214 36.000 0.00 0.00 36.31 3.07
1966 2987 9.866655 TGGAGGATAATAAATGCTCATTAACTT 57.133 29.630 8.48 0.00 38.10 2.66
2006 3027 5.376625 TCTCCTTTAACACATGCAAGTTCT 58.623 37.500 5.91 0.00 0.00 3.01
2012 3033 3.327757 ACTCCTCTCCTTTAACACATGCA 59.672 43.478 0.00 0.00 0.00 3.96
2043 3064 6.885376 TGAAACGTAGATTAGTCCTCTCTCTT 59.115 38.462 0.00 0.00 0.00 2.85
2044 3065 6.416415 TGAAACGTAGATTAGTCCTCTCTCT 58.584 40.000 0.00 0.00 0.00 3.10
2051 3072 6.183360 ACCCCTAATGAAACGTAGATTAGTCC 60.183 42.308 14.96 0.00 30.68 3.85
2054 3075 7.150640 GGTACCCCTAATGAAACGTAGATTAG 58.849 42.308 0.00 11.52 31.91 1.73
2113 3134 2.478292 CCCTGACTAAAGAGGGGCTAA 58.522 52.381 0.00 0.00 44.88 3.09
2119 3140 1.280457 AGCACCCCTGACTAAAGAGG 58.720 55.000 0.00 0.00 0.00 3.69
2129 3150 2.162681 CTAAAGTTCCAAGCACCCCTG 58.837 52.381 0.00 0.00 0.00 4.45
2137 3158 6.863645 GCTTTTTAAGAGGCTAAAGTTCCAAG 59.136 38.462 8.14 0.00 31.81 3.61
2198 3219 7.823745 AATACATATTTTAGAGGGTGCTTGG 57.176 36.000 0.00 0.00 0.00 3.61
2205 3226 7.339482 GGAGGGCTAATACATATTTTAGAGGG 58.661 42.308 0.00 0.00 0.00 4.30
2206 3227 7.182930 AGGGAGGGCTAATACATATTTTAGAGG 59.817 40.741 0.00 0.00 0.00 3.69
2207 3228 8.152023 AGGGAGGGCTAATACATATTTTAGAG 57.848 38.462 0.00 0.00 0.00 2.43
2208 3229 7.962003 AGAGGGAGGGCTAATACATATTTTAGA 59.038 37.037 0.00 0.00 0.00 2.10
2216 3237 2.456733 AGGAGAGGGAGGGCTAATACAT 59.543 50.000 0.00 0.00 0.00 2.29
2219 3240 2.152982 TGAGGAGAGGGAGGGCTAATA 58.847 52.381 0.00 0.00 0.00 0.98
2225 3246 4.662650 AGAATTAAATGAGGAGAGGGAGGG 59.337 45.833 0.00 0.00 0.00 4.30
2230 3251 9.898152 AAAGTAGAAGAATTAAATGAGGAGAGG 57.102 33.333 0.00 0.00 0.00 3.69
2245 3266 6.220930 ACTCGCATGTGTTAAAGTAGAAGAA 58.779 36.000 6.09 0.00 0.00 2.52
2248 3269 6.145534 CAGAACTCGCATGTGTTAAAGTAGAA 59.854 38.462 6.09 0.00 32.29 2.10
2252 3273 3.498397 CCAGAACTCGCATGTGTTAAAGT 59.502 43.478 6.09 0.00 32.29 2.66
2253 3274 3.745975 TCCAGAACTCGCATGTGTTAAAG 59.254 43.478 6.09 0.00 32.29 1.85
2266 3287 3.445096 CCAAACCATCCAATCCAGAACTC 59.555 47.826 0.00 0.00 0.00 3.01
2279 3300 6.064717 AGCACTTATTATCCTCCAAACCATC 58.935 40.000 0.00 0.00 0.00 3.51
2281 3302 5.045213 TGAGCACTTATTATCCTCCAAACCA 60.045 40.000 0.00 0.00 0.00 3.67
2324 3345 7.147846 ACCCATGCTTGAATCCAAATACTAAAG 60.148 37.037 0.22 0.00 0.00 1.85
2329 3350 4.402155 TCACCCATGCTTGAATCCAAATAC 59.598 41.667 0.22 0.00 0.00 1.89
2336 3357 0.743097 GCCTCACCCATGCTTGAATC 59.257 55.000 0.22 0.00 0.00 2.52
2339 3360 0.543277 CTAGCCTCACCCATGCTTGA 59.457 55.000 0.22 0.00 36.57 3.02
2351 3372 3.271729 GGGACTAAAACTTGCTAGCCTC 58.728 50.000 13.29 0.00 0.00 4.70
2365 3386 7.672660 TCTCATGACTAAAAGTAGTGGGACTAA 59.327 37.037 0.00 0.00 40.82 2.24
2392 3413 5.366829 AAGGGTGCTTGAATACGTTTTAC 57.633 39.130 0.00 0.00 0.00 2.01
2403 3424 3.258123 GGCAATTCTTAAAGGGTGCTTGA 59.742 43.478 0.00 0.00 32.61 3.02
2414 3435 6.775629 ACAAGTTAACAGGAGGCAATTCTTAA 59.224 34.615 8.61 0.00 0.00 1.85
2417 3438 4.729868 ACAAGTTAACAGGAGGCAATTCT 58.270 39.130 8.61 0.00 0.00 2.40
2418 3439 5.453567 AACAAGTTAACAGGAGGCAATTC 57.546 39.130 8.61 0.00 0.00 2.17
2419 3440 5.600696 CAAACAAGTTAACAGGAGGCAATT 58.399 37.500 8.61 0.00 0.00 2.32
2420 3441 4.501400 GCAAACAAGTTAACAGGAGGCAAT 60.501 41.667 8.61 0.00 0.00 3.56
2421 3442 3.181480 GCAAACAAGTTAACAGGAGGCAA 60.181 43.478 8.61 0.00 0.00 4.52
2422 3443 2.360801 GCAAACAAGTTAACAGGAGGCA 59.639 45.455 8.61 0.00 0.00 4.75
2423 3444 2.360801 TGCAAACAAGTTAACAGGAGGC 59.639 45.455 8.61 4.96 0.00 4.70
2424 3445 4.853924 ATGCAAACAAGTTAACAGGAGG 57.146 40.909 8.61 0.00 0.00 4.30
2425 3446 6.076981 AGAATGCAAACAAGTTAACAGGAG 57.923 37.500 8.61 0.00 0.00 3.69
2426 3447 6.096141 TGAAGAATGCAAACAAGTTAACAGGA 59.904 34.615 8.61 0.00 0.00 3.86
2427 3448 6.272318 TGAAGAATGCAAACAAGTTAACAGG 58.728 36.000 8.61 1.59 0.00 4.00
2428 3449 6.974622 ACTGAAGAATGCAAACAAGTTAACAG 59.025 34.615 8.61 2.39 0.00 3.16
2429 3450 6.862209 ACTGAAGAATGCAAACAAGTTAACA 58.138 32.000 8.61 0.00 0.00 2.41
2430 3451 7.196331 AGACTGAAGAATGCAAACAAGTTAAC 58.804 34.615 0.00 0.00 0.00 2.01
2431 3452 7.283127 AGAGACTGAAGAATGCAAACAAGTTAA 59.717 33.333 0.00 0.00 0.00 2.01
2432 3453 6.767902 AGAGACTGAAGAATGCAAACAAGTTA 59.232 34.615 0.00 0.00 0.00 2.24
2433 3454 5.591877 AGAGACTGAAGAATGCAAACAAGTT 59.408 36.000 0.00 0.00 0.00 2.66
2434 3455 5.128919 AGAGACTGAAGAATGCAAACAAGT 58.871 37.500 0.00 0.00 0.00 3.16
2435 3456 5.686159 AGAGACTGAAGAATGCAAACAAG 57.314 39.130 0.00 0.00 0.00 3.16
2436 3457 5.221106 CCAAGAGACTGAAGAATGCAAACAA 60.221 40.000 0.00 0.00 0.00 2.83
2437 3458 4.276678 CCAAGAGACTGAAGAATGCAAACA 59.723 41.667 0.00 0.00 0.00 2.83
2438 3459 4.320788 CCCAAGAGACTGAAGAATGCAAAC 60.321 45.833 0.00 0.00 0.00 2.93
2439 3460 3.822735 CCCAAGAGACTGAAGAATGCAAA 59.177 43.478 0.00 0.00 0.00 3.68
2440 3461 3.181440 ACCCAAGAGACTGAAGAATGCAA 60.181 43.478 0.00 0.00 0.00 4.08
2441 3462 2.373169 ACCCAAGAGACTGAAGAATGCA 59.627 45.455 0.00 0.00 0.00 3.96
2442 3463 3.006247 GACCCAAGAGACTGAAGAATGC 58.994 50.000 0.00 0.00 0.00 3.56
2443 3464 3.008375 TGGACCCAAGAGACTGAAGAATG 59.992 47.826 0.00 0.00 0.00 2.67
2444 3465 3.251484 TGGACCCAAGAGACTGAAGAAT 58.749 45.455 0.00 0.00 0.00 2.40
2445 3466 2.689658 TGGACCCAAGAGACTGAAGAA 58.310 47.619 0.00 0.00 0.00 2.52
2446 3467 2.398754 TGGACCCAAGAGACTGAAGA 57.601 50.000 0.00 0.00 0.00 2.87
2447 3468 2.568956 TGATGGACCCAAGAGACTGAAG 59.431 50.000 0.00 0.00 0.00 3.02
2448 3469 2.303022 GTGATGGACCCAAGAGACTGAA 59.697 50.000 0.00 0.00 0.00 3.02
2449 3470 1.902508 GTGATGGACCCAAGAGACTGA 59.097 52.381 0.00 0.00 0.00 3.41
2450 3471 1.625315 TGTGATGGACCCAAGAGACTG 59.375 52.381 0.00 0.00 0.00 3.51
2451 3472 1.905215 CTGTGATGGACCCAAGAGACT 59.095 52.381 0.00 0.00 0.00 3.24
2452 3473 1.902508 TCTGTGATGGACCCAAGAGAC 59.097 52.381 0.00 0.00 0.00 3.36
2453 3474 2.182827 CTCTGTGATGGACCCAAGAGA 58.817 52.381 8.96 0.04 0.00 3.10
2454 3475 2.182827 TCTCTGTGATGGACCCAAGAG 58.817 52.381 8.49 8.49 0.00 2.85
2455 3476 2.325661 TCTCTGTGATGGACCCAAGA 57.674 50.000 0.00 0.00 0.00 3.02
2456 3477 2.568956 TCTTCTCTGTGATGGACCCAAG 59.431 50.000 0.00 0.00 0.00 3.61
2457 3478 2.619931 TCTTCTCTGTGATGGACCCAA 58.380 47.619 0.00 0.00 0.00 4.12
2458 3479 2.325661 TCTTCTCTGTGATGGACCCA 57.674 50.000 0.00 0.00 0.00 4.51
2459 3480 2.679349 GCTTCTTCTCTGTGATGGACCC 60.679 54.545 0.00 0.00 0.00 4.46
2460 3481 2.027745 TGCTTCTTCTCTGTGATGGACC 60.028 50.000 0.00 0.00 0.00 4.46
2461 3482 3.325293 TGCTTCTTCTCTGTGATGGAC 57.675 47.619 0.00 0.00 0.00 4.02
2462 3483 3.773667 AGATGCTTCTTCTCTGTGATGGA 59.226 43.478 0.00 0.00 0.00 3.41
2463 3484 4.139859 AGATGCTTCTTCTCTGTGATGG 57.860 45.455 0.00 0.00 0.00 3.51
2464 3485 7.254829 CCAAATAGATGCTTCTTCTCTGTGATG 60.255 40.741 7.51 0.00 33.17 3.07
2465 3486 6.766944 CCAAATAGATGCTTCTTCTCTGTGAT 59.233 38.462 7.51 0.00 33.17 3.06
2466 3487 6.111382 CCAAATAGATGCTTCTTCTCTGTGA 58.889 40.000 7.51 0.00 33.17 3.58
2467 3488 5.879223 ACCAAATAGATGCTTCTTCTCTGTG 59.121 40.000 7.51 0.00 33.17 3.66
2468 3489 6.059787 ACCAAATAGATGCTTCTTCTCTGT 57.940 37.500 7.51 0.00 33.17 3.41
2469 3490 6.822676 AGAACCAAATAGATGCTTCTTCTCTG 59.177 38.462 7.51 1.49 33.17 3.35
2470 3491 6.956497 AGAACCAAATAGATGCTTCTTCTCT 58.044 36.000 7.51 0.00 33.17 3.10
2471 3492 6.259829 GGAGAACCAAATAGATGCTTCTTCTC 59.740 42.308 7.51 11.03 35.97 2.87
2472 3493 6.118852 GGAGAACCAAATAGATGCTTCTTCT 58.881 40.000 7.51 2.68 35.97 2.85
2473 3494 5.882557 TGGAGAACCAAATAGATGCTTCTTC 59.117 40.000 7.51 0.00 43.91 2.87
2474 3495 5.819991 TGGAGAACCAAATAGATGCTTCTT 58.180 37.500 7.51 0.00 43.91 2.52
2475 3496 5.441718 TGGAGAACCAAATAGATGCTTCT 57.558 39.130 7.35 7.35 43.91 2.85
2488 3509 9.096823 TCTATCTAAGTTAACTTTGGAGAACCA 57.903 33.333 25.07 10.89 45.34 3.67
2489 3510 9.589111 CTCTATCTAAGTTAACTTTGGAGAACC 57.411 37.037 25.07 0.00 37.40 3.62
2490 3511 9.089601 GCTCTATCTAAGTTAACTTTGGAGAAC 57.910 37.037 25.07 18.07 37.40 3.01
2491 3512 8.812972 TGCTCTATCTAAGTTAACTTTGGAGAA 58.187 33.333 25.07 15.43 37.40 2.87
2492 3513 8.362464 TGCTCTATCTAAGTTAACTTTGGAGA 57.638 34.615 25.07 20.76 37.40 3.71
2493 3514 9.606631 AATGCTCTATCTAAGTTAACTTTGGAG 57.393 33.333 25.07 21.86 37.40 3.86
2494 3515 9.959721 AAATGCTCTATCTAAGTTAACTTTGGA 57.040 29.630 25.07 21.48 37.40 3.53
2495 3516 9.994432 CAAATGCTCTATCTAAGTTAACTTTGG 57.006 33.333 25.07 17.56 37.40 3.28
2514 3535 6.694447 ACAAAATCATGAGCTAACAAATGCT 58.306 32.000 0.09 0.00 42.82 3.79
2515 3536 6.587226 TGACAAAATCATGAGCTAACAAATGC 59.413 34.615 0.09 0.00 29.99 3.56
2516 3537 7.201291 CGTGACAAAATCATGAGCTAACAAATG 60.201 37.037 0.09 0.00 45.96 2.32
2517 3538 6.803320 CGTGACAAAATCATGAGCTAACAAAT 59.197 34.615 0.09 0.00 45.96 2.32
2518 3539 6.142139 CGTGACAAAATCATGAGCTAACAAA 58.858 36.000 0.09 0.00 45.96 2.83
2519 3540 5.688823 CGTGACAAAATCATGAGCTAACAA 58.311 37.500 0.09 0.00 45.96 2.83
2520 3541 4.378356 GCGTGACAAAATCATGAGCTAACA 60.378 41.667 0.09 0.00 45.96 2.41
2521 3542 4.091424 GCGTGACAAAATCATGAGCTAAC 58.909 43.478 0.09 0.00 45.96 2.34
2522 3543 3.126858 GGCGTGACAAAATCATGAGCTAA 59.873 43.478 0.09 0.00 45.96 3.09
2523 3544 2.677836 GGCGTGACAAAATCATGAGCTA 59.322 45.455 0.09 0.00 45.96 3.32
2524 3545 1.470098 GGCGTGACAAAATCATGAGCT 59.530 47.619 0.09 0.00 45.96 4.09
2525 3546 1.470098 AGGCGTGACAAAATCATGAGC 59.530 47.619 0.09 0.00 45.96 4.26
2526 3547 2.730090 GCAGGCGTGACAAAATCATGAG 60.730 50.000 11.29 0.00 45.96 2.90
2527 3548 1.199789 GCAGGCGTGACAAAATCATGA 59.800 47.619 11.29 0.00 45.96 3.07
2528 3549 1.621107 GCAGGCGTGACAAAATCATG 58.379 50.000 11.29 0.00 45.85 3.07
2529 3550 0.527565 GGCAGGCGTGACAAAATCAT 59.472 50.000 11.29 0.00 40.28 2.45
2530 3551 1.851021 CGGCAGGCGTGACAAAATCA 61.851 55.000 13.58 0.00 33.79 2.57
2531 3552 1.154225 CGGCAGGCGTGACAAAATC 60.154 57.895 13.58 0.00 0.00 2.17
2532 3553 0.960364 ATCGGCAGGCGTGACAAAAT 60.960 50.000 17.01 0.00 0.00 1.82
2533 3554 1.599518 ATCGGCAGGCGTGACAAAA 60.600 52.632 17.01 0.00 0.00 2.44
2534 3555 2.031919 ATCGGCAGGCGTGACAAA 59.968 55.556 17.01 0.00 0.00 2.83
2535 3556 2.741985 CATCGGCAGGCGTGACAA 60.742 61.111 17.01 0.00 0.00 3.18
2546 3567 0.104855 TCACCTGTAGATGCATCGGC 59.895 55.000 20.67 16.92 41.68 5.54
2547 3568 1.410517 AGTCACCTGTAGATGCATCGG 59.589 52.381 20.67 17.36 0.00 4.18
2548 3569 2.099756 TCAGTCACCTGTAGATGCATCG 59.900 50.000 20.67 8.88 39.82 3.84
2549 3570 3.808466 TCAGTCACCTGTAGATGCATC 57.192 47.619 19.37 19.37 39.82 3.91
2550 3571 3.677148 CGTTCAGTCACCTGTAGATGCAT 60.677 47.826 0.00 0.00 39.82 3.96
2551 3572 2.352715 CGTTCAGTCACCTGTAGATGCA 60.353 50.000 0.00 0.00 39.82 3.96
2552 3573 2.094700 TCGTTCAGTCACCTGTAGATGC 60.095 50.000 0.00 0.00 39.82 3.91
2553 3574 3.191581 ACTCGTTCAGTCACCTGTAGATG 59.808 47.826 0.00 0.00 39.82 2.90
2554 3575 3.191581 CACTCGTTCAGTCACCTGTAGAT 59.808 47.826 0.00 0.00 39.82 1.98
2555 3576 2.552743 CACTCGTTCAGTCACCTGTAGA 59.447 50.000 0.00 0.00 39.82 2.59
2556 3577 2.922758 GCACTCGTTCAGTCACCTGTAG 60.923 54.545 0.00 0.00 39.82 2.74
2557 3578 1.000607 GCACTCGTTCAGTCACCTGTA 60.001 52.381 0.00 0.00 39.82 2.74
2558 3579 0.249489 GCACTCGTTCAGTCACCTGT 60.249 55.000 0.00 0.00 39.82 4.00
2559 3580 0.249447 TGCACTCGTTCAGTCACCTG 60.249 55.000 0.00 0.00 40.25 4.00
2560 3581 0.464036 TTGCACTCGTTCAGTCACCT 59.536 50.000 0.00 0.00 30.26 4.00
2561 3582 0.861837 CTTGCACTCGTTCAGTCACC 59.138 55.000 0.00 0.00 30.26 4.02
2562 3583 1.571919 ACTTGCACTCGTTCAGTCAC 58.428 50.000 0.00 0.00 30.26 3.67
2563 3584 2.201732 GAACTTGCACTCGTTCAGTCA 58.798 47.619 14.47 0.00 39.36 3.41
2564 3585 2.201732 TGAACTTGCACTCGTTCAGTC 58.798 47.619 16.90 0.32 43.10 3.51
2565 3586 2.309528 TGAACTTGCACTCGTTCAGT 57.690 45.000 16.90 0.86 43.10 3.41
2567 3588 2.201732 GTCTGAACTTGCACTCGTTCA 58.798 47.619 18.71 18.71 45.03 3.18
2568 3589 1.527311 GGTCTGAACTTGCACTCGTTC 59.473 52.381 13.12 13.12 39.85 3.95
2569 3590 1.583054 GGTCTGAACTTGCACTCGTT 58.417 50.000 0.00 0.00 0.00 3.85
2570 3591 0.249911 GGGTCTGAACTTGCACTCGT 60.250 55.000 0.00 0.00 0.00 4.18
2571 3592 0.034059 AGGGTCTGAACTTGCACTCG 59.966 55.000 0.00 0.00 0.00 4.18
2572 3593 1.070758 TCAGGGTCTGAACTTGCACTC 59.929 52.381 0.00 0.00 37.57 3.51
2573 3594 1.131638 TCAGGGTCTGAACTTGCACT 58.868 50.000 0.00 0.00 37.57 4.40
2574 3595 1.967319 TTCAGGGTCTGAACTTGCAC 58.033 50.000 6.28 0.00 44.27 4.57
2582 3603 3.309296 AGTTCAGAGTTTCAGGGTCTGA 58.691 45.455 0.00 0.00 43.91 3.27
2583 3604 3.658709 GAGTTCAGAGTTTCAGGGTCTG 58.341 50.000 0.00 0.00 39.31 3.51
2584 3605 2.297597 CGAGTTCAGAGTTTCAGGGTCT 59.702 50.000 0.00 0.00 0.00 3.85
2585 3606 2.678324 CGAGTTCAGAGTTTCAGGGTC 58.322 52.381 0.00 0.00 0.00 4.46
2586 3607 1.270358 GCGAGTTCAGAGTTTCAGGGT 60.270 52.381 0.00 0.00 0.00 4.34
2587 3608 1.270305 TGCGAGTTCAGAGTTTCAGGG 60.270 52.381 0.00 0.00 0.00 4.45
2588 3609 2.154854 TGCGAGTTCAGAGTTTCAGG 57.845 50.000 0.00 0.00 0.00 3.86
2589 3610 2.866156 TGTTGCGAGTTCAGAGTTTCAG 59.134 45.455 0.00 0.00 0.00 3.02
2590 3611 2.866156 CTGTTGCGAGTTCAGAGTTTCA 59.134 45.455 0.00 0.00 0.00 2.69
2591 3612 2.348966 GCTGTTGCGAGTTCAGAGTTTC 60.349 50.000 0.00 0.00 0.00 2.78
2592 3613 1.599542 GCTGTTGCGAGTTCAGAGTTT 59.400 47.619 0.00 0.00 0.00 2.66
2593 3614 1.221414 GCTGTTGCGAGTTCAGAGTT 58.779 50.000 0.00 0.00 0.00 3.01
2594 3615 0.601311 GGCTGTTGCGAGTTCAGAGT 60.601 55.000 0.00 0.00 40.82 3.24
2595 3616 0.320247 AGGCTGTTGCGAGTTCAGAG 60.320 55.000 0.00 0.00 40.82 3.35
2596 3617 0.601046 CAGGCTGTTGCGAGTTCAGA 60.601 55.000 6.28 0.00 40.82 3.27
2597 3618 0.882042 ACAGGCTGTTGCGAGTTCAG 60.882 55.000 15.88 0.00 40.82 3.02
2598 3619 0.463654 AACAGGCTGTTGCGAGTTCA 60.464 50.000 30.71 0.00 39.45 3.18
2599 3620 2.321213 AACAGGCTGTTGCGAGTTC 58.679 52.632 30.71 0.00 39.45 3.01
2600 3621 4.559502 AACAGGCTGTTGCGAGTT 57.440 50.000 30.71 5.96 39.45 3.01
2607 3628 1.071471 CCGAGTCCAACAGGCTGTT 59.929 57.895 26.54 26.54 42.08 3.16
2608 3629 2.743718 CCGAGTCCAACAGGCTGT 59.256 61.111 15.88 15.88 0.00 4.40
2609 3630 2.046892 CCCGAGTCCAACAGGCTG 60.047 66.667 14.16 14.16 0.00 4.85
2610 3631 4.021925 GCCCGAGTCCAACAGGCT 62.022 66.667 0.00 0.00 40.57 4.58
2611 3632 3.553095 AAGCCCGAGTCCAACAGGC 62.553 63.158 0.00 0.00 44.20 4.85
2612 3633 1.672356 CAAGCCCGAGTCCAACAGG 60.672 63.158 0.00 0.00 0.00 4.00
2613 3634 2.328099 GCAAGCCCGAGTCCAACAG 61.328 63.158 0.00 0.00 0.00 3.16
2614 3635 2.281484 GCAAGCCCGAGTCCAACA 60.281 61.111 0.00 0.00 0.00 3.33
2615 3636 2.281484 TGCAAGCCCGAGTCCAAC 60.281 61.111 0.00 0.00 0.00 3.77
2616 3637 2.032528 CTGCAAGCCCGAGTCCAA 59.967 61.111 0.00 0.00 0.00 3.53
2627 3648 3.341043 ACACGTGAGCGCTGCAAG 61.341 61.111 25.01 17.15 42.83 4.01
2628 3649 3.639008 CACACGTGAGCGCTGCAA 61.639 61.111 25.01 0.00 42.83 4.08
2629 3650 4.889856 ACACACGTGAGCGCTGCA 62.890 61.111 25.01 10.41 42.83 4.41
2630 3651 4.360027 CACACACGTGAGCGCTGC 62.360 66.667 25.01 6.57 46.80 5.25
2631 3652 2.961721 ACACACACGTGAGCGCTG 60.962 61.111 25.01 12.24 46.80 5.18
2632 3653 2.961721 CACACACACGTGAGCGCT 60.962 61.111 25.01 11.27 46.80 5.92
2636 3657 2.584970 ACGGCACACACACGTGAG 60.585 61.111 25.01 18.00 46.80 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.