Multiple sequence alignment - TraesCS2A01G590800

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G590800 chr2A 100.000 3015 0 0 1 3015 778787844 778790858 0.000000e+00 5568.0
1 TraesCS2A01G590800 chr2A 88.889 747 31 25 1307 2009 778760233 778760971 0.000000e+00 872.0
2 TraesCS2A01G590800 chr2A 77.181 1433 188 86 457 1821 778914150 778915511 0.000000e+00 706.0
3 TraesCS2A01G590800 chr2A 78.045 1207 139 71 831 1986 778876133 778877264 0.000000e+00 645.0
4 TraesCS2A01G590800 chr2A 84.228 615 63 16 1258 1852 778827463 778828063 4.360000e-158 568.0
5 TraesCS2A01G590800 chr2A 77.749 764 82 45 385 1097 778826621 778827347 3.640000e-104 388.0
6 TraesCS2A01G590800 chr2A 83.830 235 22 7 639 867 778814094 778814318 3.050000e-50 209.0
7 TraesCS2A01G590800 chr2A 79.585 289 28 16 812 1086 778759812 778760083 8.590000e-41 178.0
8 TraesCS2A01G590800 chr2D 88.782 1141 73 20 735 1852 634575828 634574720 0.000000e+00 1347.0
9 TraesCS2A01G590800 chr2D 87.814 796 42 23 1219 1986 634658675 634657907 0.000000e+00 881.0
10 TraesCS2A01G590800 chr2D 78.643 1489 142 98 451 1852 634483036 634481637 0.000000e+00 826.0
11 TraesCS2A01G590800 chr2D 85.349 587 32 21 144 692 634576395 634575825 2.630000e-155 558.0
12 TraesCS2A01G590800 chr2D 83.062 614 66 18 1258 1852 634556410 634555816 9.580000e-145 523.0
13 TraesCS2A01G590800 chr2D 85.340 191 23 5 2586 2773 223550845 223550657 3.070000e-45 193.0
14 TraesCS2A01G590800 chr2D 86.339 183 18 7 2595 2773 631194443 631194264 3.070000e-45 193.0
15 TraesCS2A01G590800 chr2D 85.870 92 7 2 1 86 634576500 634576409 3.200000e-15 93.5
16 TraesCS2A01G590800 chr2B 80.846 1300 141 56 735 1992 777619230 777617997 0.000000e+00 922.0
17 TraesCS2A01G590800 chr2B 87.995 733 42 23 1219 1930 777658812 777658105 0.000000e+00 824.0
18 TraesCS2A01G590800 chr2B 78.384 1485 168 78 550 1986 777549974 777548595 0.000000e+00 822.0
19 TraesCS2A01G590800 chr2B 84.581 681 80 17 1916 2591 777657845 777657185 0.000000e+00 652.0
20 TraesCS2A01G590800 chr2B 85.838 579 31 14 144 692 777619784 777619227 4.360000e-158 568.0
21 TraesCS2A01G590800 chr2B 90.504 337 32 0 1516 1852 777634018 777633682 2.130000e-121 446.0
22 TraesCS2A01G590800 chr2B 78.849 695 57 51 812 1498 777635405 777634793 1.310000e-103 387.0
23 TraesCS2A01G590800 chr2B 75.982 662 75 40 9 615 777608290 777607658 6.410000e-67 265.0
24 TraesCS2A01G590800 chr2B 75.873 659 72 53 451 1067 777522535 777521922 3.860000e-64 255.0
25 TraesCS2A01G590800 chr2B 83.607 122 9 4 1 122 777619885 777619775 1.480000e-18 104.0
26 TraesCS2A01G590800 chr3D 87.293 181 16 6 2602 2777 575732387 575732565 1.830000e-47 200.0
27 TraesCS2A01G590800 chr3D 85.864 191 20 6 2586 2772 299744497 299744310 2.370000e-46 196.0
28 TraesCS2A01G590800 chr6D 86.243 189 19 6 2588 2772 112815730 112815915 6.590000e-47 198.0
29 TraesCS2A01G590800 chr6D 86.096 187 19 6 2590 2772 348607390 348607207 8.530000e-46 195.0
30 TraesCS2A01G590800 chr5D 86.170 188 19 6 2589 2772 116575869 116576053 2.370000e-46 196.0
31 TraesCS2A01G590800 chr7D 85.789 190 20 7 2589 2774 181008228 181008042 8.530000e-46 195.0
32 TraesCS2A01G590800 chr7D 85.638 188 20 6 2589 2772 510608149 510608333 1.100000e-44 191.0
33 TraesCS2A01G590800 chr5A 88.889 63 7 0 2233 2295 38151724 38151662 8.960000e-11 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G590800 chr2A 778787844 778790858 3014 False 5568.000000 5568 100.000000 1 3015 1 chr2A.!!$F1 3014
1 TraesCS2A01G590800 chr2A 778914150 778915511 1361 False 706.000000 706 77.181000 457 1821 1 chr2A.!!$F4 1364
2 TraesCS2A01G590800 chr2A 778876133 778877264 1131 False 645.000000 645 78.045000 831 1986 1 chr2A.!!$F3 1155
3 TraesCS2A01G590800 chr2A 778759812 778760971 1159 False 525.000000 872 84.237000 812 2009 2 chr2A.!!$F5 1197
4 TraesCS2A01G590800 chr2A 778826621 778828063 1442 False 478.000000 568 80.988500 385 1852 2 chr2A.!!$F6 1467
5 TraesCS2A01G590800 chr2D 634657907 634658675 768 True 881.000000 881 87.814000 1219 1986 1 chr2D.!!$R5 767
6 TraesCS2A01G590800 chr2D 634481637 634483036 1399 True 826.000000 826 78.643000 451 1852 1 chr2D.!!$R3 1401
7 TraesCS2A01G590800 chr2D 634574720 634576500 1780 True 666.166667 1347 86.667000 1 1852 3 chr2D.!!$R6 1851
8 TraesCS2A01G590800 chr2D 634555816 634556410 594 True 523.000000 523 83.062000 1258 1852 1 chr2D.!!$R4 594
9 TraesCS2A01G590800 chr2B 777548595 777549974 1379 True 822.000000 822 78.384000 550 1986 1 chr2B.!!$R2 1436
10 TraesCS2A01G590800 chr2B 777657185 777658812 1627 True 738.000000 824 86.288000 1219 2591 2 chr2B.!!$R6 1372
11 TraesCS2A01G590800 chr2B 777617997 777619885 1888 True 531.333333 922 83.430333 1 1992 3 chr2B.!!$R4 1991
12 TraesCS2A01G590800 chr2B 777633682 777635405 1723 True 416.500000 446 84.676500 812 1852 2 chr2B.!!$R5 1040
13 TraesCS2A01G590800 chr2B 777607658 777608290 632 True 265.000000 265 75.982000 9 615 1 chr2B.!!$R3 606
14 TraesCS2A01G590800 chr2B 777521922 777522535 613 True 255.000000 255 75.873000 451 1067 1 chr2B.!!$R1 616

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
694 859 0.461961 AGCATCTAGTTCTGCCGTCC 59.538 55.0 9.88 0.0 39.22 4.79 F
1602 2745 0.828762 TCTTCCCGTTCCTCACCGAA 60.829 55.0 0.00 0.0 0.00 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1854 3035 0.322975 ACTATGCCTCGATCCCATGC 59.677 55.0 0.00 0.0 0.00 4.06 R
2812 4293 0.035739 GACGGCCAGGTGGTAAGAAA 59.964 55.0 2.24 0.0 37.57 2.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
84 90 1.590610 GACGAGCAGAGCACAGGAGA 61.591 60.000 0.00 0.00 0.00 3.71
132 142 2.515290 CCCCCATTAACGCCGACC 60.515 66.667 0.00 0.00 0.00 4.79
199 236 0.665369 GCAAAGCACAGTGGATGCAC 60.665 55.000 9.70 9.70 45.92 4.57
208 245 3.750155 TGGATGCACGCGTCGGTA 61.750 61.111 9.86 0.00 33.03 4.02
352 394 1.511254 TCGCGTTCGTCGATCACAG 60.511 57.895 5.77 0.00 42.86 3.66
353 395 1.796355 CGCGTTCGTCGATCACAGT 60.796 57.895 0.00 0.00 42.86 3.55
354 396 0.519792 CGCGTTCGTCGATCACAGTA 60.520 55.000 0.00 0.00 42.86 2.74
355 397 1.823828 GCGTTCGTCGATCACAGTAT 58.176 50.000 0.00 0.00 42.86 2.12
507 622 3.475774 CGTTCGGTTTCCTCGGCG 61.476 66.667 0.00 0.00 0.00 6.46
529 656 3.300239 ACTGAACGCTCCTACTCCTAT 57.700 47.619 0.00 0.00 0.00 2.57
530 657 4.434545 ACTGAACGCTCCTACTCCTATA 57.565 45.455 0.00 0.00 0.00 1.31
531 658 4.136051 ACTGAACGCTCCTACTCCTATAC 58.864 47.826 0.00 0.00 0.00 1.47
532 659 4.141436 ACTGAACGCTCCTACTCCTATACT 60.141 45.833 0.00 0.00 0.00 2.12
533 660 4.789807 TGAACGCTCCTACTCCTATACTT 58.210 43.478 0.00 0.00 0.00 2.24
534 661 5.198965 TGAACGCTCCTACTCCTATACTTT 58.801 41.667 0.00 0.00 0.00 2.66
628 793 4.660938 GTGGGAGTGGGGGTGCAC 62.661 72.222 8.80 8.80 0.00 4.57
664 829 1.079621 TGGGGGAAGCTACCTTCGA 59.920 57.895 7.26 0.00 46.76 3.71
672 837 1.153823 GCTACCTTCGAGCGCAAGA 60.154 57.895 11.47 5.25 43.02 3.02
694 859 0.461961 AGCATCTAGTTCTGCCGTCC 59.538 55.000 9.88 0.00 39.22 4.79
752 936 1.630148 CGCCGGCTTCTATGTATAGC 58.370 55.000 26.68 0.00 0.00 2.97
753 937 1.630148 GCCGGCTTCTATGTATAGCG 58.370 55.000 22.15 0.00 35.77 4.26
754 938 1.736032 GCCGGCTTCTATGTATAGCGG 60.736 57.143 22.15 9.77 36.22 5.52
921 1137 2.750712 GCTACGTCTCACTCTCTCCTTT 59.249 50.000 0.00 0.00 0.00 3.11
937 1176 5.757988 TCTCCTTTCTCTCCCTACTTAGTC 58.242 45.833 0.00 0.00 0.00 2.59
970 1241 0.866427 TCGATCGGTTAGAGCTAGCG 59.134 55.000 16.41 0.16 37.81 4.26
1064 1359 1.210204 AAGGATGGCTCCAGCTTCCA 61.210 55.000 17.79 0.00 44.79 3.53
1178 1497 1.301244 CAGGTCAGTCACTGCGCTT 60.301 57.895 9.73 0.00 0.00 4.68
1289 1639 2.680913 CGGGCAAGAAGAACGGCAG 61.681 63.158 0.00 0.00 0.00 4.85
1563 2703 4.421479 CACGAGACGCGCCCTCTT 62.421 66.667 21.53 13.06 46.04 2.85
1567 2707 3.296709 GAGACGCGCCCTCTTTCCA 62.297 63.158 18.32 0.00 0.00 3.53
1602 2745 0.828762 TCTTCCCGTTCCTCACCGAA 60.829 55.000 0.00 0.00 0.00 4.30
1684 2833 0.896940 GACCACGGACCACCTCTACA 60.897 60.000 0.00 0.00 0.00 2.74
1852 3033 2.126071 GCGTTCGAGGCTGCTGTA 60.126 61.111 0.00 0.00 0.00 2.74
1854 3035 1.756375 GCGTTCGAGGCTGCTGTATG 61.756 60.000 0.00 0.00 0.00 2.39
1855 3036 1.756375 CGTTCGAGGCTGCTGTATGC 61.756 60.000 0.00 0.00 43.25 3.14
1869 3060 0.035317 GTATGCATGGGATCGAGGCA 59.965 55.000 10.16 5.32 39.03 4.75
1870 3061 0.986527 TATGCATGGGATCGAGGCAT 59.013 50.000 10.16 16.63 46.07 4.40
1873 3064 0.322975 GCATGGGATCGAGGCATAGT 59.677 55.000 0.00 0.00 0.00 2.12
1875 3066 0.322975 ATGGGATCGAGGCATAGTGC 59.677 55.000 0.00 0.00 44.08 4.40
1876 3067 0.760567 TGGGATCGAGGCATAGTGCT 60.761 55.000 1.64 0.00 44.28 4.40
1877 3068 1.257743 GGGATCGAGGCATAGTGCTA 58.742 55.000 1.64 0.00 44.28 3.49
1886 3077 4.440250 CGAGGCATAGTGCTACTAGTTTGT 60.440 45.833 0.00 0.00 44.28 2.83
1986 3464 5.229887 GCGTTTCAGGTTATATTTGCATGTG 59.770 40.000 0.00 0.00 0.00 3.21
1987 3465 5.743398 CGTTTCAGGTTATATTTGCATGTGG 59.257 40.000 0.00 0.00 0.00 4.17
1988 3466 6.404184 CGTTTCAGGTTATATTTGCATGTGGA 60.404 38.462 0.00 0.00 0.00 4.02
1989 3467 7.491682 GTTTCAGGTTATATTTGCATGTGGAT 58.508 34.615 0.00 0.00 0.00 3.41
1990 3468 6.638096 TCAGGTTATATTTGCATGTGGATG 57.362 37.500 0.00 0.00 0.00 3.51
1993 3471 7.445096 TCAGGTTATATTTGCATGTGGATGTAG 59.555 37.037 0.00 0.00 31.50 2.74
1995 3473 7.998383 AGGTTATATTTGCATGTGGATGTAGAA 59.002 33.333 0.00 0.00 31.50 2.10
1996 3474 8.629158 GGTTATATTTGCATGTGGATGTAGAAA 58.371 33.333 0.00 0.00 31.50 2.52
1998 3476 7.886629 ATATTTGCATGTGGATGTAGAAAGT 57.113 32.000 0.00 0.00 31.50 2.66
2000 3478 5.627499 TTGCATGTGGATGTAGAAAGTTC 57.373 39.130 0.00 0.00 31.50 3.01
2001 3479 4.650734 TGCATGTGGATGTAGAAAGTTCA 58.349 39.130 0.00 0.00 31.50 3.18
2002 3480 5.255687 TGCATGTGGATGTAGAAAGTTCAT 58.744 37.500 0.00 0.00 31.50 2.57
2004 3482 5.355071 GCATGTGGATGTAGAAAGTTCATGA 59.645 40.000 0.00 0.00 34.14 3.07
2005 3483 6.457934 GCATGTGGATGTAGAAAGTTCATGAG 60.458 42.308 0.00 0.00 34.14 2.90
2007 3485 6.950842 TGTGGATGTAGAAAGTTCATGAGAT 58.049 36.000 0.00 0.00 0.00 2.75
2008 3486 7.044181 TGTGGATGTAGAAAGTTCATGAGATC 58.956 38.462 0.00 0.00 0.00 2.75
2009 3487 7.093156 TGTGGATGTAGAAAGTTCATGAGATCT 60.093 37.037 0.00 0.00 0.00 2.75
2010 3488 8.417106 GTGGATGTAGAAAGTTCATGAGATCTA 58.583 37.037 0.00 0.61 0.00 1.98
2011 3489 8.417106 TGGATGTAGAAAGTTCATGAGATCTAC 58.583 37.037 20.78 20.78 39.60 2.59
2012 3490 7.593273 GGATGTAGAAAGTTCATGAGATCTACG 59.407 40.741 21.42 0.00 41.18 3.51
2013 3491 6.266323 TGTAGAAAGTTCATGAGATCTACGC 58.734 40.000 21.42 9.82 41.18 4.42
2014 3492 5.330455 AGAAAGTTCATGAGATCTACGCA 57.670 39.130 0.00 0.00 0.00 5.24
2015 3493 5.724328 AGAAAGTTCATGAGATCTACGCAA 58.276 37.500 0.00 0.00 0.00 4.85
2016 3494 6.166279 AGAAAGTTCATGAGATCTACGCAAA 58.834 36.000 0.00 0.00 0.00 3.68
2017 3495 6.650807 AGAAAGTTCATGAGATCTACGCAAAA 59.349 34.615 0.00 0.00 0.00 2.44
2018 3496 6.801539 AAGTTCATGAGATCTACGCAAAAA 57.198 33.333 0.00 0.00 0.00 1.94
2070 3548 3.883489 ACTTTTCTTTTCCCTCCGACTTG 59.117 43.478 0.00 0.00 0.00 3.16
2086 3564 2.796593 GACTTGCAATGTTTTGGTGCTC 59.203 45.455 0.00 0.00 39.09 4.26
2089 3567 3.641437 TGCAATGTTTTGGTGCTCTAC 57.359 42.857 0.00 0.00 39.09 2.59
2129 3607 7.072581 TCACTAGAAGAGATAGTGGTATCCTCA 59.927 40.741 11.92 0.00 46.62 3.86
2138 3616 3.096852 AGTGGTATCCTCAACACATCGA 58.903 45.455 0.00 0.00 36.35 3.59
2148 3626 5.475719 CCTCAACACATCGAGGTTTAAGTA 58.524 41.667 0.00 0.00 43.32 2.24
2154 3632 7.880059 ACACATCGAGGTTTAAGTACTAAAC 57.120 36.000 0.00 14.51 45.95 2.01
2157 3635 9.630098 CACATCGAGGTTTAAGTACTAAACTTA 57.370 33.333 18.80 5.47 46.85 2.24
2170 3648 7.270047 AGTACTAAACTTAACACTTGTGCTCA 58.730 34.615 0.00 0.00 33.35 4.26
2171 3649 7.931948 AGTACTAAACTTAACACTTGTGCTCAT 59.068 33.333 0.00 0.00 33.35 2.90
2210 3688 3.824806 GTCTTGTCGACGGTCGTG 58.175 61.111 27.53 16.68 41.35 4.35
2216 3694 1.725625 GTCGACGGTCGTGCGTTTA 60.726 57.895 27.53 6.10 41.35 2.01
2228 3706 4.620184 GTCGTGCGTTTAGAGTAGATGTTT 59.380 41.667 0.00 0.00 0.00 2.83
2230 3708 4.258899 CGTGCGTTTAGAGTAGATGTTTCG 60.259 45.833 0.00 0.00 0.00 3.46
2231 3709 4.855388 GTGCGTTTAGAGTAGATGTTTCGA 59.145 41.667 0.00 0.00 0.00 3.71
2248 3726 3.818961 TCGATCGACTACAAAGACGTT 57.181 42.857 15.15 0.00 40.91 3.99
2261 3739 6.671614 ACAAAGACGTTTATGACAACTTCA 57.328 33.333 0.00 0.00 39.11 3.02
2269 3747 8.099364 ACGTTTATGACAACTTCATCAATCTT 57.901 30.769 0.00 0.00 41.53 2.40
2301 3779 4.833390 TGTCGTCTCAGTCTCTCAAGATA 58.167 43.478 0.00 0.00 33.08 1.98
2304 3782 5.353123 GTCGTCTCAGTCTCTCAAGATACTT 59.647 44.000 0.00 0.00 30.34 2.24
2310 3788 9.521841 TCTCAGTCTCTCAAGATACTTAAAAGA 57.478 33.333 0.00 0.00 30.34 2.52
2311 3789 9.787532 CTCAGTCTCTCAAGATACTTAAAAGAG 57.212 37.037 0.00 0.00 30.34 2.85
2318 3796 9.529823 TCTCAAGATACTTAAAAGAGTAGACCA 57.470 33.333 0.00 0.00 35.72 4.02
2321 3799 8.821894 CAAGATACTTAAAAGAGTAGACCATGC 58.178 37.037 0.00 0.00 35.72 4.06
2325 3803 6.476378 ACTTAAAAGAGTAGACCATGCATGT 58.524 36.000 24.58 13.09 0.00 3.21
2326 3804 6.372659 ACTTAAAAGAGTAGACCATGCATGTG 59.627 38.462 24.58 17.76 0.00 3.21
2331 3811 3.753272 GAGTAGACCATGCATGTGTGTTT 59.247 43.478 24.58 13.17 0.00 2.83
2333 3813 4.695455 AGTAGACCATGCATGTGTGTTTAC 59.305 41.667 24.58 21.22 0.00 2.01
2338 3818 3.752747 CCATGCATGTGTGTTTACAGAGA 59.247 43.478 24.58 0.00 37.52 3.10
2365 3845 9.353999 TGAATGTATATATATGTCAACGTCTGC 57.646 33.333 5.44 0.00 0.00 4.26
2366 3846 7.971004 ATGTATATATATGTCAACGTCTGCG 57.029 36.000 5.44 0.00 44.93 5.18
2416 3897 9.422196 GATATTACTAAAAAGATCACACGTTGC 57.578 33.333 0.00 0.00 29.47 4.17
2418 3899 3.880490 ACTAAAAAGATCACACGTTGCCA 59.120 39.130 0.00 0.00 0.00 4.92
2421 3902 1.896220 AAGATCACACGTTGCCATGT 58.104 45.000 0.00 0.00 0.00 3.21
2422 3903 2.760634 AGATCACACGTTGCCATGTA 57.239 45.000 0.00 0.00 0.00 2.29
2423 3904 2.346803 AGATCACACGTTGCCATGTAC 58.653 47.619 0.00 0.00 0.00 2.90
2429 3910 1.234615 ACGTTGCCATGTACCTGCAC 61.235 55.000 1.06 0.00 34.16 4.57
2430 3911 1.233950 CGTTGCCATGTACCTGCACA 61.234 55.000 1.06 0.00 34.16 4.57
2437 3918 1.599071 CATGTACCTGCACATTAGCCG 59.401 52.381 0.00 0.00 37.02 5.52
2451 3932 4.084223 ACATTAGCCGAGTGTAAAAACACG 60.084 41.667 3.22 0.00 44.71 4.49
2456 3937 3.001127 GCCGAGTGTAAAAACACGTGTTA 59.999 43.478 32.47 16.01 44.71 2.41
2480 3961 4.216042 TCGAAATGGTGTAAGTCGAGTACA 59.784 41.667 5.05 5.05 35.92 2.90
2496 3977 3.059884 AGTACAGATCAAAGCACACACG 58.940 45.455 0.00 0.00 0.00 4.49
2515 3996 3.552699 CACGGTAACAAAAGTGAACTCGA 59.447 43.478 0.00 0.00 36.79 4.04
2521 4002 5.385396 AACAAAAGTGAACTCGACTTACG 57.615 39.130 0.00 0.00 44.09 3.18
2544 4025 1.673033 CCAGTAAGTCAAGAGGCCGTG 60.673 57.143 0.00 0.00 0.00 4.94
2579 4060 3.989817 GGCTTACACAAAATTCTTGGCAG 59.010 43.478 0.00 0.00 0.00 4.85
2593 4074 9.625747 AAATTCTTGGCAGAAAATTTAAAAGGA 57.374 25.926 12.13 0.00 42.53 3.36
2594 4075 9.797642 AATTCTTGGCAGAAAATTTAAAAGGAT 57.202 25.926 0.00 0.00 42.53 3.24
2595 4076 8.606040 TTCTTGGCAGAAAATTTAAAAGGATG 57.394 30.769 0.00 0.00 35.99 3.51
2596 4077 7.734942 TCTTGGCAGAAAATTTAAAAGGATGT 58.265 30.769 0.00 0.00 0.00 3.06
2597 4078 8.865090 TCTTGGCAGAAAATTTAAAAGGATGTA 58.135 29.630 0.00 0.00 0.00 2.29
2598 4079 9.657419 CTTGGCAGAAAATTTAAAAGGATGTAT 57.343 29.630 0.00 0.00 0.00 2.29
2599 4080 9.651913 TTGGCAGAAAATTTAAAAGGATGTATC 57.348 29.630 0.00 0.00 0.00 2.24
2600 4081 9.034800 TGGCAGAAAATTTAAAAGGATGTATCT 57.965 29.630 0.00 0.00 0.00 1.98
2601 4082 9.875691 GGCAGAAAATTTAAAAGGATGTATCTT 57.124 29.630 0.00 0.00 0.00 2.40
2612 4093 7.741554 AAAGGATGTATCTTAGGTCTTCAGT 57.258 36.000 0.00 0.00 0.00 3.41
2613 4094 6.969993 AGGATGTATCTTAGGTCTTCAGTC 57.030 41.667 0.00 0.00 0.00 3.51
2614 4095 5.533154 AGGATGTATCTTAGGTCTTCAGTCG 59.467 44.000 0.00 0.00 0.00 4.18
2615 4096 5.531659 GGATGTATCTTAGGTCTTCAGTCGA 59.468 44.000 0.00 0.00 0.00 4.20
2616 4097 5.814764 TGTATCTTAGGTCTTCAGTCGAC 57.185 43.478 7.70 7.70 0.00 4.20
2617 4098 5.498393 TGTATCTTAGGTCTTCAGTCGACT 58.502 41.667 13.58 13.58 0.00 4.18
2618 4099 4.974368 ATCTTAGGTCTTCAGTCGACTG 57.026 45.455 34.76 34.76 45.08 3.51
2644 4125 6.867662 ACTTAACCAAGTCTCAATCAAGTG 57.132 37.500 0.00 0.00 41.25 3.16
2645 4126 6.357367 ACTTAACCAAGTCTCAATCAAGTGT 58.643 36.000 0.00 0.00 41.25 3.55
2646 4127 6.828785 ACTTAACCAAGTCTCAATCAAGTGTT 59.171 34.615 0.00 0.00 41.25 3.32
2647 4128 7.339466 ACTTAACCAAGTCTCAATCAAGTGTTT 59.661 33.333 0.00 0.00 41.25 2.83
2648 4129 6.530019 AACCAAGTCTCAATCAAGTGTTTT 57.470 33.333 0.00 0.00 0.00 2.43
2649 4130 7.639113 AACCAAGTCTCAATCAAGTGTTTTA 57.361 32.000 0.00 0.00 0.00 1.52
2650 4131 7.264373 ACCAAGTCTCAATCAAGTGTTTTAG 57.736 36.000 0.00 0.00 0.00 1.85
2651 4132 6.828785 ACCAAGTCTCAATCAAGTGTTTTAGT 59.171 34.615 0.00 0.00 0.00 2.24
2652 4133 7.990886 ACCAAGTCTCAATCAAGTGTTTTAGTA 59.009 33.333 0.00 0.00 0.00 1.82
2653 4134 9.003658 CCAAGTCTCAATCAAGTGTTTTAGTAT 57.996 33.333 0.00 0.00 0.00 2.12
2691 4172 9.946418 AAAAACTGAAAAGAAAATTTTCGTACG 57.054 25.926 21.98 9.53 41.92 3.67
2692 4173 8.898983 AAACTGAAAAGAAAATTTTCGTACGA 57.101 26.923 21.98 15.28 41.92 3.43
2693 4174 8.898983 AACTGAAAAGAAAATTTTCGTACGAA 57.101 26.923 26.00 26.00 41.92 3.85
2694 4175 9.511144 AACTGAAAAGAAAATTTTCGTACGAAT 57.489 25.926 29.56 15.65 41.92 3.34
2695 4176 8.953990 ACTGAAAAGAAAATTTTCGTACGAATG 58.046 29.630 29.56 13.06 41.92 2.67
2696 4177 8.844441 TGAAAAGAAAATTTTCGTACGAATGT 57.156 26.923 29.56 18.56 41.92 2.71
2697 4178 8.949953 TGAAAAGAAAATTTTCGTACGAATGTC 58.050 29.630 29.56 19.36 41.92 3.06
2698 4179 7.847166 AAAGAAAATTTTCGTACGAATGTCC 57.153 32.000 29.56 16.59 41.92 4.02
2699 4180 6.548441 AGAAAATTTTCGTACGAATGTCCA 57.452 33.333 29.56 13.07 41.92 4.02
2700 4181 7.141100 AGAAAATTTTCGTACGAATGTCCAT 57.859 32.000 29.56 15.24 41.92 3.41
2701 4182 7.021196 AGAAAATTTTCGTACGAATGTCCATG 58.979 34.615 29.56 0.00 41.92 3.66
2702 4183 3.733024 TTTTCGTACGAATGTCCATGC 57.267 42.857 29.56 0.00 33.79 4.06
2703 4184 2.371910 TTCGTACGAATGTCCATGCA 57.628 45.000 26.00 0.34 0.00 3.96
2704 4185 2.371910 TCGTACGAATGTCCATGCAA 57.628 45.000 17.11 0.00 0.00 4.08
2705 4186 2.689646 TCGTACGAATGTCCATGCAAA 58.310 42.857 17.11 0.00 0.00 3.68
2706 4187 3.067833 TCGTACGAATGTCCATGCAAAA 58.932 40.909 17.11 0.00 0.00 2.44
2707 4188 3.687212 TCGTACGAATGTCCATGCAAAAT 59.313 39.130 17.11 0.00 0.00 1.82
2708 4189 4.028383 CGTACGAATGTCCATGCAAAATC 58.972 43.478 10.44 0.00 0.00 2.17
2709 4190 4.436718 CGTACGAATGTCCATGCAAAATCA 60.437 41.667 10.44 0.00 0.00 2.57
2710 4191 4.517952 ACGAATGTCCATGCAAAATCAA 57.482 36.364 0.00 0.00 0.00 2.57
2711 4192 4.880759 ACGAATGTCCATGCAAAATCAAA 58.119 34.783 0.00 0.00 0.00 2.69
2712 4193 4.925054 ACGAATGTCCATGCAAAATCAAAG 59.075 37.500 0.00 0.00 0.00 2.77
2713 4194 5.162794 CGAATGTCCATGCAAAATCAAAGA 58.837 37.500 0.00 0.00 0.00 2.52
2714 4195 5.634439 CGAATGTCCATGCAAAATCAAAGAA 59.366 36.000 0.00 0.00 0.00 2.52
2715 4196 6.145858 CGAATGTCCATGCAAAATCAAAGAAA 59.854 34.615 0.00 0.00 0.00 2.52
2716 4197 7.148540 CGAATGTCCATGCAAAATCAAAGAAAT 60.149 33.333 0.00 0.00 0.00 2.17
2717 4198 9.153721 GAATGTCCATGCAAAATCAAAGAAATA 57.846 29.630 0.00 0.00 0.00 1.40
2718 4199 9.675464 AATGTCCATGCAAAATCAAAGAAATAT 57.325 25.926 0.00 0.00 0.00 1.28
2720 4201 9.806203 TGTCCATGCAAAATCAAAGAAATATAG 57.194 29.630 0.00 0.00 0.00 1.31
2721 4202 8.758715 GTCCATGCAAAATCAAAGAAATATAGC 58.241 33.333 0.00 0.00 0.00 2.97
2722 4203 8.476447 TCCATGCAAAATCAAAGAAATATAGCA 58.524 29.630 0.00 0.00 0.00 3.49
2723 4204 9.268268 CCATGCAAAATCAAAGAAATATAGCAT 57.732 29.630 0.00 0.00 38.23 3.79
2726 4207 9.872721 TGCAAAATCAAAGAAATATAGCATTGA 57.127 25.926 0.00 0.00 0.00 2.57
2732 4213 9.842775 ATCAAAGAAATATAGCATTGACTGAGA 57.157 29.630 0.00 0.00 30.46 3.27
2733 4214 9.842775 TCAAAGAAATATAGCATTGACTGAGAT 57.157 29.630 0.00 0.00 0.00 2.75
2748 4229 9.814899 ATTGACTGAGATACAATGAAGTCTAAG 57.185 33.333 0.00 0.00 33.79 2.18
2749 4230 8.354711 TGACTGAGATACAATGAAGTCTAAGT 57.645 34.615 0.00 4.76 35.56 2.24
2750 4231 8.807118 TGACTGAGATACAATGAAGTCTAAGTT 58.193 33.333 0.00 0.00 33.52 2.66
2751 4232 8.994429 ACTGAGATACAATGAAGTCTAAGTTG 57.006 34.615 0.00 0.00 29.92 3.16
2752 4233 8.807118 ACTGAGATACAATGAAGTCTAAGTTGA 58.193 33.333 0.00 0.00 29.92 3.18
2753 4234 8.988064 TGAGATACAATGAAGTCTAAGTTGAC 57.012 34.615 0.00 0.00 37.23 3.18
2755 4236 8.994429 AGATACAATGAAGTCTAAGTTGACTG 57.006 34.615 8.21 1.57 45.49 3.51
2756 4237 8.807118 AGATACAATGAAGTCTAAGTTGACTGA 58.193 33.333 8.21 1.47 45.49 3.41
2757 4238 8.994429 ATACAATGAAGTCTAAGTTGACTGAG 57.006 34.615 8.21 0.00 45.49 3.35
2758 4239 7.055667 ACAATGAAGTCTAAGTTGACTGAGA 57.944 36.000 8.21 0.00 45.49 3.27
2765 4246 6.015027 GTCTAAGTTGACTGAGACTTAGCA 57.985 41.667 17.74 5.41 46.47 3.49
2766 4247 6.448006 GTCTAAGTTGACTGAGACTTAGCAA 58.552 40.000 17.74 0.00 46.47 3.91
2767 4248 6.924060 GTCTAAGTTGACTGAGACTTAGCAAA 59.076 38.462 17.74 0.66 46.47 3.68
2768 4249 7.438459 GTCTAAGTTGACTGAGACTTAGCAAAA 59.562 37.037 17.74 0.38 46.47 2.44
2769 4250 5.993106 AGTTGACTGAGACTTAGCAAAAC 57.007 39.130 5.94 3.61 0.00 2.43
2770 4251 5.675538 AGTTGACTGAGACTTAGCAAAACT 58.324 37.500 5.94 5.35 0.00 2.66
2771 4252 5.525378 AGTTGACTGAGACTTAGCAAAACTG 59.475 40.000 8.24 0.00 0.00 3.16
2772 4253 5.276461 TGACTGAGACTTAGCAAAACTGA 57.724 39.130 0.00 0.00 0.00 3.41
2773 4254 5.670485 TGACTGAGACTTAGCAAAACTGAA 58.330 37.500 0.00 0.00 0.00 3.02
2774 4255 6.291377 TGACTGAGACTTAGCAAAACTGAAT 58.709 36.000 0.00 0.00 0.00 2.57
2775 4256 6.767902 TGACTGAGACTTAGCAAAACTGAATT 59.232 34.615 0.00 0.00 0.00 2.17
2776 4257 7.283127 TGACTGAGACTTAGCAAAACTGAATTT 59.717 33.333 0.00 0.00 0.00 1.82
2777 4258 8.677148 ACTGAGACTTAGCAAAACTGAATTTA 57.323 30.769 0.00 0.00 0.00 1.40
2778 4259 9.120538 ACTGAGACTTAGCAAAACTGAATTTAA 57.879 29.630 0.00 0.00 0.00 1.52
2779 4260 9.950680 CTGAGACTTAGCAAAACTGAATTTAAA 57.049 29.630 0.00 0.00 0.00 1.52
2786 4267 9.752961 TTAGCAAAACTGAATTTAAAAGTACCC 57.247 29.630 0.00 0.00 0.00 3.69
2787 4268 6.921307 AGCAAAACTGAATTTAAAAGTACCCG 59.079 34.615 0.00 0.00 0.00 5.28
2788 4269 6.144886 GCAAAACTGAATTTAAAAGTACCCGG 59.855 38.462 0.00 0.00 0.00 5.73
2789 4270 6.964807 AAACTGAATTTAAAAGTACCCGGT 57.035 33.333 0.00 0.00 0.00 5.28
2790 4271 6.964807 AACTGAATTTAAAAGTACCCGGTT 57.035 33.333 0.00 0.00 0.00 4.44
2791 4272 6.964807 ACTGAATTTAAAAGTACCCGGTTT 57.035 33.333 0.00 0.00 0.00 3.27
2792 4273 8.462589 AACTGAATTTAAAAGTACCCGGTTTA 57.537 30.769 0.00 0.00 0.00 2.01
2793 4274 7.874940 ACTGAATTTAAAAGTACCCGGTTTAC 58.125 34.615 0.00 0.99 0.00 2.01
2794 4275 7.501892 ACTGAATTTAAAAGTACCCGGTTTACA 59.498 33.333 11.88 0.00 0.00 2.41
2795 4276 8.406730 TGAATTTAAAAGTACCCGGTTTACAT 57.593 30.769 11.88 1.46 0.00 2.29
2796 4277 9.512588 TGAATTTAAAAGTACCCGGTTTACATA 57.487 29.630 11.88 1.63 0.00 2.29
2797 4278 9.992910 GAATTTAAAAGTACCCGGTTTACATAG 57.007 33.333 11.88 0.00 0.00 2.23
2798 4279 7.920160 TTTAAAAGTACCCGGTTTACATAGG 57.080 36.000 11.88 0.00 0.00 2.57
2802 4283 3.700198 CCCGGTTTACATAGGGCTC 57.300 57.895 0.00 0.00 37.07 4.70
2803 4284 1.129058 CCCGGTTTACATAGGGCTCT 58.871 55.000 0.00 0.00 37.07 4.09
2804 4285 1.070289 CCCGGTTTACATAGGGCTCTC 59.930 57.143 0.00 0.00 37.07 3.20
2805 4286 1.269621 CCGGTTTACATAGGGCTCTCG 60.270 57.143 0.00 0.00 0.00 4.04
2806 4287 1.269621 CGGTTTACATAGGGCTCTCGG 60.270 57.143 0.00 0.00 0.00 4.63
2807 4288 1.070289 GGTTTACATAGGGCTCTCGGG 59.930 57.143 0.00 0.00 0.00 5.14
2808 4289 1.761198 GTTTACATAGGGCTCTCGGGT 59.239 52.381 0.00 0.00 0.00 5.28
2809 4290 2.961062 GTTTACATAGGGCTCTCGGGTA 59.039 50.000 0.00 0.00 0.00 3.69
2810 4291 2.283145 TACATAGGGCTCTCGGGTAC 57.717 55.000 0.00 0.00 0.00 3.34
2811 4292 0.260816 ACATAGGGCTCTCGGGTACA 59.739 55.000 0.00 0.00 0.00 2.90
2812 4293 1.133136 ACATAGGGCTCTCGGGTACAT 60.133 52.381 0.00 0.00 0.00 2.29
2813 4294 1.971357 CATAGGGCTCTCGGGTACATT 59.029 52.381 0.00 0.00 0.00 2.71
2814 4295 2.170012 TAGGGCTCTCGGGTACATTT 57.830 50.000 0.00 0.00 0.00 2.32
2815 4296 0.831307 AGGGCTCTCGGGTACATTTC 59.169 55.000 0.00 0.00 0.00 2.17
2816 4297 0.831307 GGGCTCTCGGGTACATTTCT 59.169 55.000 0.00 0.00 0.00 2.52
2817 4298 1.209747 GGGCTCTCGGGTACATTTCTT 59.790 52.381 0.00 0.00 0.00 2.52
2818 4299 2.433239 GGGCTCTCGGGTACATTTCTTA 59.567 50.000 0.00 0.00 0.00 2.10
2819 4300 3.455327 GGCTCTCGGGTACATTTCTTAC 58.545 50.000 0.00 0.00 0.00 2.34
2820 4301 3.455327 GCTCTCGGGTACATTTCTTACC 58.545 50.000 0.00 0.00 38.69 2.85
2821 4302 3.118884 GCTCTCGGGTACATTTCTTACCA 60.119 47.826 0.00 0.00 40.88 3.25
2822 4303 4.430908 CTCTCGGGTACATTTCTTACCAC 58.569 47.826 0.00 0.00 40.88 4.16
2823 4304 3.196254 TCTCGGGTACATTTCTTACCACC 59.804 47.826 0.00 0.00 40.88 4.61
2824 4305 3.175594 TCGGGTACATTTCTTACCACCT 58.824 45.455 0.00 0.00 40.88 4.00
2825 4306 3.055675 TCGGGTACATTTCTTACCACCTG 60.056 47.826 0.00 0.00 40.88 4.00
2826 4307 3.617284 GGGTACATTTCTTACCACCTGG 58.383 50.000 0.00 0.00 40.88 4.45
2827 4308 3.014623 GGTACATTTCTTACCACCTGGC 58.985 50.000 0.00 0.00 39.17 4.85
2828 4309 2.215942 ACATTTCTTACCACCTGGCC 57.784 50.000 0.00 0.00 39.32 5.36
2829 4310 1.094785 CATTTCTTACCACCTGGCCG 58.905 55.000 0.00 0.00 39.32 6.13
2830 4311 0.696501 ATTTCTTACCACCTGGCCGT 59.303 50.000 0.00 0.00 39.32 5.68
2831 4312 0.035739 TTTCTTACCACCTGGCCGTC 59.964 55.000 0.00 0.00 39.32 4.79
2832 4313 2.125673 CTTACCACCTGGCCGTCG 60.126 66.667 0.00 0.00 39.32 5.12
2833 4314 2.918802 TTACCACCTGGCCGTCGT 60.919 61.111 0.00 0.00 39.32 4.34
2834 4315 2.830704 CTTACCACCTGGCCGTCGTC 62.831 65.000 0.00 0.00 39.32 4.20
2844 4325 2.428902 CCGTCGTCCGTGCGTTTA 60.429 61.111 0.00 0.00 33.66 2.01
2845 4326 2.015627 CCGTCGTCCGTGCGTTTAA 61.016 57.895 0.00 0.00 33.66 1.52
2846 4327 1.126438 CGTCGTCCGTGCGTTTAAC 59.874 57.895 0.00 0.00 0.00 2.01
2847 4328 1.126438 GTCGTCCGTGCGTTTAACG 59.874 57.895 13.57 13.57 45.88 3.18
2853 4334 1.058284 CGTGCGTTTAACGGCTAGC 59.942 57.895 19.23 6.04 42.82 3.42
2854 4335 1.058284 GTGCGTTTAACGGCTAGCG 59.942 57.895 19.23 6.83 42.82 4.26
2855 4336 2.020969 GCGTTTAACGGCTAGCGC 59.979 61.111 19.23 0.00 42.82 5.92
2856 4337 2.315356 CGTTTAACGGCTAGCGCG 59.685 61.111 19.72 19.72 38.08 6.86
2857 4338 2.153945 CGTTTAACGGCTAGCGCGA 61.154 57.895 25.67 0.00 38.08 5.87
2858 4339 1.342810 GTTTAACGGCTAGCGCGAC 59.657 57.895 25.67 13.37 36.88 5.19
2859 4340 2.153945 TTTAACGGCTAGCGCGACG 61.154 57.895 25.67 18.17 36.88 5.12
2860 4341 4.541482 TAACGGCTAGCGCGACGG 62.541 66.667 25.67 9.08 36.88 4.79
2866 4347 2.809601 CTAGCGCGACGGCAGTTT 60.810 61.111 12.10 0.00 39.92 2.66
2867 4348 3.071459 CTAGCGCGACGGCAGTTTG 62.071 63.158 12.10 0.00 39.92 2.93
2868 4349 3.851845 TAGCGCGACGGCAGTTTGT 62.852 57.895 12.10 0.00 39.92 2.83
2869 4350 2.475098 TAGCGCGACGGCAGTTTGTA 62.475 55.000 12.10 0.00 39.92 2.41
2870 4351 2.736682 GCGCGACGGCAGTTTGTAT 61.737 57.895 12.10 0.00 39.92 2.29
2871 4352 1.415288 GCGCGACGGCAGTTTGTATA 61.415 55.000 12.10 0.00 39.92 1.47
2872 4353 0.993532 CGCGACGGCAGTTTGTATAA 59.006 50.000 0.00 0.00 39.92 0.98
2873 4354 1.390803 CGCGACGGCAGTTTGTATAAA 59.609 47.619 0.00 0.00 39.92 1.40
2874 4355 2.765918 GCGACGGCAGTTTGTATAAAC 58.234 47.619 6.97 6.97 45.13 2.01
2875 4356 2.475022 GCGACGGCAGTTTGTATAAACC 60.475 50.000 11.06 0.00 45.77 3.27
2876 4357 2.222640 CGACGGCAGTTTGTATAAACCG 60.223 50.000 11.06 10.39 45.77 4.44
2877 4358 2.995258 GACGGCAGTTTGTATAAACCGA 59.005 45.455 16.02 0.00 45.77 4.69
2878 4359 2.997986 ACGGCAGTTTGTATAAACCGAG 59.002 45.455 16.02 7.24 45.77 4.63
2879 4360 2.997986 CGGCAGTTTGTATAAACCGAGT 59.002 45.455 11.06 0.00 45.77 4.18
2880 4361 4.175516 CGGCAGTTTGTATAAACCGAGTA 58.824 43.478 11.06 0.00 45.77 2.59
2881 4362 4.032104 CGGCAGTTTGTATAAACCGAGTAC 59.968 45.833 11.06 0.00 45.77 2.73
2882 4363 4.931002 GGCAGTTTGTATAAACCGAGTACA 59.069 41.667 11.06 0.00 45.77 2.90
2883 4364 5.163923 GGCAGTTTGTATAAACCGAGTACAC 60.164 44.000 11.06 0.00 45.77 2.90
2884 4365 5.406175 GCAGTTTGTATAAACCGAGTACACA 59.594 40.000 11.06 0.00 45.77 3.72
2885 4366 6.617105 GCAGTTTGTATAAACCGAGTACACAC 60.617 42.308 11.06 0.00 45.77 3.82
2886 4367 5.630680 AGTTTGTATAAACCGAGTACACACG 59.369 40.000 11.06 0.00 45.77 4.49
2887 4368 4.764679 TGTATAAACCGAGTACACACGT 57.235 40.909 0.00 0.00 0.00 4.49
2888 4369 5.871465 TGTATAAACCGAGTACACACGTA 57.129 39.130 0.00 0.00 0.00 3.57
2889 4370 6.435430 TGTATAAACCGAGTACACACGTAT 57.565 37.500 0.00 0.00 0.00 3.06
2890 4371 6.257423 TGTATAAACCGAGTACACACGTATG 58.743 40.000 0.00 0.00 0.00 2.39
2891 4372 2.642139 AACCGAGTACACACGTATGG 57.358 50.000 0.00 0.00 0.00 2.74
2892 4373 0.171903 ACCGAGTACACACGTATGGC 59.828 55.000 0.00 0.00 0.00 4.40
2893 4374 0.454600 CCGAGTACACACGTATGGCT 59.545 55.000 0.00 0.00 0.00 4.75
2894 4375 1.533338 CCGAGTACACACGTATGGCTC 60.533 57.143 0.00 4.75 0.00 4.70
2895 4376 1.400846 CGAGTACACACGTATGGCTCT 59.599 52.381 15.27 3.90 0.00 4.09
2896 4377 2.539142 CGAGTACACACGTATGGCTCTC 60.539 54.545 15.27 10.51 0.00 3.20
2897 4378 1.400846 AGTACACACGTATGGCTCTCG 59.599 52.381 0.00 0.00 0.00 4.04
2898 4379 0.736636 TACACACGTATGGCTCTCGG 59.263 55.000 0.00 0.00 0.00 4.63
2899 4380 0.963856 ACACACGTATGGCTCTCGGA 60.964 55.000 0.00 0.00 0.00 4.55
2900 4381 0.385751 CACACGTATGGCTCTCGGAT 59.614 55.000 0.00 0.00 0.00 4.18
2901 4382 1.112113 ACACGTATGGCTCTCGGATT 58.888 50.000 0.00 0.00 0.00 3.01
2902 4383 2.034179 CACACGTATGGCTCTCGGATTA 59.966 50.000 0.00 0.00 0.00 1.75
2903 4384 2.891580 ACACGTATGGCTCTCGGATTAT 59.108 45.455 0.00 0.00 0.00 1.28
2904 4385 4.077108 ACACGTATGGCTCTCGGATTATA 58.923 43.478 0.00 0.00 0.00 0.98
2905 4386 4.705507 ACACGTATGGCTCTCGGATTATAT 59.294 41.667 0.00 0.00 0.00 0.86
2906 4387 5.185249 ACACGTATGGCTCTCGGATTATATT 59.815 40.000 0.00 0.00 0.00 1.28
2907 4388 6.100004 CACGTATGGCTCTCGGATTATATTT 58.900 40.000 0.00 0.00 0.00 1.40
2908 4389 6.590292 CACGTATGGCTCTCGGATTATATTTT 59.410 38.462 0.00 0.00 0.00 1.82
2909 4390 7.117812 CACGTATGGCTCTCGGATTATATTTTT 59.882 37.037 0.00 0.00 0.00 1.94
2910 4391 8.308931 ACGTATGGCTCTCGGATTATATTTTTA 58.691 33.333 0.00 0.00 0.00 1.52
2911 4392 9.314321 CGTATGGCTCTCGGATTATATTTTTAT 57.686 33.333 0.00 0.00 0.00 1.40
2936 4417 6.976934 ATTTCTTTCCTTTGTAAAGCAGGA 57.023 33.333 0.00 0.00 34.58 3.86
2937 4418 5.767816 TTCTTTCCTTTGTAAAGCAGGAC 57.232 39.130 0.00 0.00 34.58 3.85
2938 4419 4.787551 TCTTTCCTTTGTAAAGCAGGACA 58.212 39.130 0.00 0.00 34.58 4.02
2939 4420 4.578928 TCTTTCCTTTGTAAAGCAGGACAC 59.421 41.667 0.00 0.00 34.58 3.67
2940 4421 2.489971 TCCTTTGTAAAGCAGGACACG 58.510 47.619 0.00 0.00 34.69 4.49
2941 4422 1.069227 CCTTTGTAAAGCAGGACACGC 60.069 52.381 0.00 0.00 34.69 5.34
2942 4423 1.873591 CTTTGTAAAGCAGGACACGCT 59.126 47.619 0.00 0.00 42.98 5.07
2946 4427 3.044305 AAGCAGGACACGCTTCGC 61.044 61.111 0.00 0.00 46.61 4.70
2949 4430 2.811317 CAGGACACGCTTCGCCTC 60.811 66.667 0.00 0.00 0.00 4.70
2950 4431 4.421479 AGGACACGCTTCGCCTCG 62.421 66.667 0.00 0.00 0.00 4.63
2953 4434 4.664677 ACACGCTTCGCCTCGCTT 62.665 61.111 0.00 0.00 0.00 4.68
2954 4435 3.843240 CACGCTTCGCCTCGCTTC 61.843 66.667 0.00 0.00 0.00 3.86
2955 4436 4.057428 ACGCTTCGCCTCGCTTCT 62.057 61.111 0.00 0.00 0.00 2.85
2956 4437 2.102357 CGCTTCGCCTCGCTTCTA 59.898 61.111 0.00 0.00 0.00 2.10
2957 4438 1.299468 CGCTTCGCCTCGCTTCTAT 60.299 57.895 0.00 0.00 0.00 1.98
2958 4439 0.872021 CGCTTCGCCTCGCTTCTATT 60.872 55.000 0.00 0.00 0.00 1.73
2959 4440 1.291132 GCTTCGCCTCGCTTCTATTT 58.709 50.000 0.00 0.00 0.00 1.40
2960 4441 2.470821 GCTTCGCCTCGCTTCTATTTA 58.529 47.619 0.00 0.00 0.00 1.40
2961 4442 2.218987 GCTTCGCCTCGCTTCTATTTAC 59.781 50.000 0.00 0.00 0.00 2.01
2962 4443 3.444916 CTTCGCCTCGCTTCTATTTACA 58.555 45.455 0.00 0.00 0.00 2.41
2963 4444 2.805845 TCGCCTCGCTTCTATTTACAC 58.194 47.619 0.00 0.00 0.00 2.90
2964 4445 2.426024 TCGCCTCGCTTCTATTTACACT 59.574 45.455 0.00 0.00 0.00 3.55
2965 4446 2.789893 CGCCTCGCTTCTATTTACACTC 59.210 50.000 0.00 0.00 0.00 3.51
2966 4447 3.733988 CGCCTCGCTTCTATTTACACTCA 60.734 47.826 0.00 0.00 0.00 3.41
2967 4448 3.799420 GCCTCGCTTCTATTTACACTCAG 59.201 47.826 0.00 0.00 0.00 3.35
2968 4449 3.799420 CCTCGCTTCTATTTACACTCAGC 59.201 47.826 0.00 0.00 0.00 4.26
2969 4450 4.440802 CCTCGCTTCTATTTACACTCAGCT 60.441 45.833 0.00 0.00 0.00 4.24
2970 4451 5.073311 TCGCTTCTATTTACACTCAGCTT 57.927 39.130 0.00 0.00 0.00 3.74
2971 4452 6.203808 TCGCTTCTATTTACACTCAGCTTA 57.796 37.500 0.00 0.00 0.00 3.09
2972 4453 6.034591 TCGCTTCTATTTACACTCAGCTTAC 58.965 40.000 0.00 0.00 0.00 2.34
2973 4454 5.052304 CGCTTCTATTTACACTCAGCTTACG 60.052 44.000 0.00 0.00 0.00 3.18
2974 4455 5.276442 GCTTCTATTTACACTCAGCTTACGC 60.276 44.000 0.00 0.00 0.00 4.42
2976 4457 5.962433 TCTATTTACACTCAGCTTACGCTT 58.038 37.500 0.00 0.00 46.47 4.68
2977 4458 4.928661 ATTTACACTCAGCTTACGCTTG 57.071 40.909 0.00 0.00 46.47 4.01
2978 4459 3.653539 TTACACTCAGCTTACGCTTGA 57.346 42.857 0.00 0.00 46.47 3.02
2979 4460 2.071688 ACACTCAGCTTACGCTTGAG 57.928 50.000 14.67 14.67 46.47 3.02
2980 4461 1.341531 ACACTCAGCTTACGCTTGAGT 59.658 47.619 15.60 15.60 46.47 3.41
2981 4462 2.224066 ACACTCAGCTTACGCTTGAGTT 60.224 45.455 17.53 10.44 46.47 3.01
2982 4463 3.005472 ACACTCAGCTTACGCTTGAGTTA 59.995 43.478 17.53 0.00 46.47 2.24
2983 4464 4.177026 CACTCAGCTTACGCTTGAGTTAT 58.823 43.478 17.53 2.11 46.47 1.89
2984 4465 5.105877 ACACTCAGCTTACGCTTGAGTTATA 60.106 40.000 17.53 0.00 46.47 0.98
2985 4466 5.457148 CACTCAGCTTACGCTTGAGTTATAG 59.543 44.000 17.53 8.12 46.47 1.31
2986 4467 5.357314 ACTCAGCTTACGCTTGAGTTATAGA 59.643 40.000 15.60 0.00 46.47 1.98
2987 4468 6.039941 ACTCAGCTTACGCTTGAGTTATAGAT 59.960 38.462 15.60 0.00 46.47 1.98
2988 4469 6.439599 TCAGCTTACGCTTGAGTTATAGATC 58.560 40.000 0.00 0.00 46.47 2.75
2989 4470 6.039382 TCAGCTTACGCTTGAGTTATAGATCA 59.961 38.462 0.00 0.00 46.47 2.92
2990 4471 6.865726 CAGCTTACGCTTGAGTTATAGATCAT 59.134 38.462 0.00 0.00 46.47 2.45
2991 4472 6.865726 AGCTTACGCTTGAGTTATAGATCATG 59.134 38.462 0.00 0.00 46.47 3.07
2992 4473 6.090088 GCTTACGCTTGAGTTATAGATCATGG 59.910 42.308 0.00 0.00 0.00 3.66
2993 4474 4.310769 ACGCTTGAGTTATAGATCATGGC 58.689 43.478 0.00 5.28 0.00 4.40
2994 4475 4.039730 ACGCTTGAGTTATAGATCATGGCT 59.960 41.667 0.00 0.00 0.00 4.75
2995 4476 5.243954 ACGCTTGAGTTATAGATCATGGCTA 59.756 40.000 0.00 0.00 0.00 3.93
2996 4477 5.804473 CGCTTGAGTTATAGATCATGGCTAG 59.196 44.000 0.00 0.00 0.00 3.42
2997 4478 5.580297 GCTTGAGTTATAGATCATGGCTAGC 59.420 44.000 6.04 6.04 0.00 3.42
2998 4479 5.667539 TGAGTTATAGATCATGGCTAGCC 57.332 43.478 27.71 27.71 0.00 3.93
3007 4488 4.488136 TGGCTAGCCATGCACCCG 62.488 66.667 32.88 0.00 41.89 5.28
3008 4489 4.175337 GGCTAGCCATGCACCCGA 62.175 66.667 29.33 0.00 35.81 5.14
3009 4490 2.897350 GCTAGCCATGCACCCGAC 60.897 66.667 2.29 0.00 0.00 4.79
3010 4491 2.203070 CTAGCCATGCACCCGACC 60.203 66.667 0.00 0.00 0.00 4.79
3011 4492 3.757248 CTAGCCATGCACCCGACCC 62.757 68.421 0.00 0.00 0.00 4.46
3014 4495 4.047125 CCATGCACCCGACCCCTT 62.047 66.667 0.00 0.00 0.00 3.95
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 2.548295 CGAGCTAGGCGGGAGAGAC 61.548 68.421 0.00 0.00 0.00 3.36
44 50 2.034532 TCAGGGTGACGCGACCTA 59.965 61.111 15.93 0.00 36.14 3.08
45 51 3.681835 GTCAGGGTGACGCGACCT 61.682 66.667 15.93 12.01 37.67 3.85
421 471 4.202090 GGATGGATGGAATCTTGCAAGTTC 60.202 45.833 25.19 23.74 44.71 3.01
507 622 1.819903 AGGAGTAGGAGCGTTCAGTTC 59.180 52.381 0.53 0.00 0.00 3.01
529 656 4.340950 GGCCATGCCTTATTAGCAAAAGTA 59.659 41.667 0.00 0.00 46.69 2.24
530 657 3.132824 GGCCATGCCTTATTAGCAAAAGT 59.867 43.478 0.00 0.00 46.69 2.66
531 658 3.721035 GGCCATGCCTTATTAGCAAAAG 58.279 45.455 0.00 0.00 46.69 2.27
532 659 3.817709 GGCCATGCCTTATTAGCAAAA 57.182 42.857 0.00 0.00 46.69 2.44
582 718 2.100631 GTCGCGTTCCATGTCTGGG 61.101 63.158 5.77 0.00 43.34 4.45
649 814 1.227002 CGCTCGAAGGTAGCTTCCC 60.227 63.158 24.96 14.35 37.85 3.97
664 829 1.480137 ACTAGATGCTCTTCTTGCGCT 59.520 47.619 9.73 0.00 0.00 5.92
672 837 1.827969 ACGGCAGAACTAGATGCTCTT 59.172 47.619 15.39 2.54 42.19 2.85
692 857 4.201679 CGCGGCATGGACGTAGGA 62.202 66.667 0.00 0.00 35.91 2.94
694 859 2.954868 GACGCGGCATGGACGTAG 60.955 66.667 7.34 0.00 40.69 3.51
752 936 4.323477 TTCGTCCAGTTGGGGCCG 62.323 66.667 0.00 0.00 38.37 6.13
753 937 2.671963 GTTCGTCCAGTTGGGGCC 60.672 66.667 0.00 0.00 38.37 5.80
754 938 3.047877 CGTTCGTCCAGTTGGGGC 61.048 66.667 0.00 0.00 38.17 5.80
784 968 3.137533 GGTCGTGGCCTACTAGTAGTAG 58.862 54.545 24.85 24.85 45.93 2.57
802 989 4.265056 AGCGGTTGGGTGGTGGTC 62.265 66.667 0.00 0.00 0.00 4.02
921 1137 4.443175 CGTAGCTGACTAAGTAGGGAGAGA 60.443 50.000 0.00 0.00 0.00 3.10
970 1241 3.041351 TGCGCGTGGTGATCACAC 61.041 61.111 26.47 19.71 46.36 3.82
992 1265 1.443802 GTCGCTTAAAAGGAGCTGCT 58.556 50.000 0.00 0.00 37.99 4.24
1111 1406 2.701606 GAATCTTCCGCGGCGAAC 59.298 61.111 25.92 13.44 0.00 3.95
1175 1494 2.942710 TGTAAGTACGCAGTGAGAAGC 58.057 47.619 0.00 0.00 45.73 3.86
1178 1497 3.756963 AGTCATGTAAGTACGCAGTGAGA 59.243 43.478 0.00 0.00 45.73 3.27
1210 1529 1.402325 CGCATCAGTACGTGGAGTTGA 60.402 52.381 0.00 0.00 0.00 3.18
1563 2703 3.961414 GGGAGCGGGTGGTTGGAA 61.961 66.667 0.00 0.00 0.00 3.53
1567 2707 3.637273 GACTGGGAGCGGGTGGTT 61.637 66.667 0.00 0.00 0.00 3.67
1611 2754 1.301716 GAACTGCGGCAGGAAGACA 60.302 57.895 31.38 0.00 35.51 3.41
1847 3028 1.436600 CTCGATCCCATGCATACAGC 58.563 55.000 0.00 0.00 45.96 4.40
1852 3033 0.986527 TATGCCTCGATCCCATGCAT 59.013 50.000 0.00 0.00 44.28 3.96
1854 3035 0.322975 ACTATGCCTCGATCCCATGC 59.677 55.000 0.00 0.00 0.00 4.06
1855 3036 1.943046 GCACTATGCCTCGATCCCATG 60.943 57.143 0.00 0.00 37.42 3.66
1856 3037 0.322975 GCACTATGCCTCGATCCCAT 59.677 55.000 0.00 0.00 37.42 4.00
1857 3038 0.760567 AGCACTATGCCTCGATCCCA 60.761 55.000 0.00 0.00 46.52 4.37
1858 3039 1.067495 GTAGCACTATGCCTCGATCCC 60.067 57.143 0.00 0.00 46.52 3.85
1859 3040 1.889829 AGTAGCACTATGCCTCGATCC 59.110 52.381 0.00 0.00 46.52 3.36
1869 3060 7.670605 TTCCCATACAAACTAGTAGCACTAT 57.329 36.000 0.00 0.00 29.08 2.12
1870 3061 7.484993 TTTCCCATACAAACTAGTAGCACTA 57.515 36.000 0.00 0.00 0.00 2.74
1873 3064 7.172342 ACAATTTCCCATACAAACTAGTAGCA 58.828 34.615 0.00 0.00 0.00 3.49
1875 3066 8.814235 CGTACAATTTCCCATACAAACTAGTAG 58.186 37.037 0.00 0.00 0.00 2.57
1876 3067 8.313292 ACGTACAATTTCCCATACAAACTAGTA 58.687 33.333 0.00 0.00 0.00 1.82
1877 3068 7.163441 ACGTACAATTTCCCATACAAACTAGT 58.837 34.615 0.00 0.00 0.00 2.57
1886 3077 4.468510 ACAGGAGACGTACAATTTCCCATA 59.531 41.667 0.00 0.00 0.00 2.74
1927 3404 8.204836 AGGTAATCAGACAATTATAGTGTGGTC 58.795 37.037 0.00 0.00 31.78 4.02
1928 3405 8.090788 AGGTAATCAGACAATTATAGTGTGGT 57.909 34.615 0.00 0.00 31.78 4.16
1929 3406 9.698309 CTAGGTAATCAGACAATTATAGTGTGG 57.302 37.037 0.00 0.00 31.78 4.17
1930 3407 9.197694 GCTAGGTAATCAGACAATTATAGTGTG 57.802 37.037 0.00 0.00 0.00 3.82
1931 3408 9.148879 AGCTAGGTAATCAGACAATTATAGTGT 57.851 33.333 0.00 0.00 0.00 3.55
1935 3412 8.631480 TCGAGCTAGGTAATCAGACAATTATA 57.369 34.615 0.00 0.00 0.00 0.98
1936 3413 7.526142 TCGAGCTAGGTAATCAGACAATTAT 57.474 36.000 0.00 0.00 0.00 1.28
1964 3441 6.862209 TCCACATGCAAATATAACCTGAAAC 58.138 36.000 0.00 0.00 0.00 2.78
1986 3464 7.593273 CGTAGATCTCATGAACTTTCTACATCC 59.407 40.741 21.55 6.83 36.80 3.51
1987 3465 7.114247 GCGTAGATCTCATGAACTTTCTACATC 59.886 40.741 21.55 14.27 36.80 3.06
1988 3466 6.920758 GCGTAGATCTCATGAACTTTCTACAT 59.079 38.462 21.55 0.00 36.80 2.29
1989 3467 6.127730 TGCGTAGATCTCATGAACTTTCTACA 60.128 38.462 21.55 9.95 36.80 2.74
1990 3468 6.266323 TGCGTAGATCTCATGAACTTTCTAC 58.734 40.000 16.53 16.53 34.75 2.59
1993 3471 6.408858 TTTGCGTAGATCTCATGAACTTTC 57.591 37.500 0.00 0.00 0.00 2.62
1995 3473 6.801539 TTTTTGCGTAGATCTCATGAACTT 57.198 33.333 0.00 0.00 0.00 2.66
2038 3516 8.857098 GGAGGGAAAAGAAAAGTACTTAACAAT 58.143 33.333 8.92 0.00 0.00 2.71
2059 3537 1.247567 AAACATTGCAAGTCGGAGGG 58.752 50.000 4.94 0.00 0.00 4.30
2070 3548 3.641437 TGTAGAGCACCAAAACATTGC 57.359 42.857 0.00 0.00 0.00 3.56
2129 3607 8.302965 GTTTAGTACTTAAACCTCGATGTGTT 57.697 34.615 0.00 0.00 43.44 3.32
2148 3626 8.671384 TTATGAGCACAAGTGTTAAGTTTAGT 57.329 30.769 1.79 0.00 0.00 2.24
2157 3635 8.584157 TCCAAAAATATTATGAGCACAAGTGTT 58.416 29.630 1.79 0.00 0.00 3.32
2196 3674 3.754740 AACGCACGACCGTCGACAA 62.755 57.895 27.03 0.00 43.74 3.18
2201 3679 0.386478 ACTCTAAACGCACGACCGTC 60.386 55.000 0.00 0.00 41.16 4.79
2205 3683 3.756069 ACATCTACTCTAAACGCACGAC 58.244 45.455 0.00 0.00 0.00 4.34
2207 3685 4.258899 CGAAACATCTACTCTAAACGCACG 60.259 45.833 0.00 0.00 0.00 5.34
2210 3688 5.108705 CGATCGAAACATCTACTCTAAACGC 60.109 44.000 10.26 0.00 0.00 4.84
2216 3694 5.816258 TGTAGTCGATCGAAACATCTACTCT 59.184 40.000 28.37 17.98 32.54 3.24
2228 3706 3.818961 AACGTCTTTGTAGTCGATCGA 57.181 42.857 15.15 15.15 36.60 3.59
2230 3708 6.525628 TGTCATAAACGTCTTTGTAGTCGATC 59.474 38.462 0.00 0.00 36.60 3.69
2231 3709 6.384224 TGTCATAAACGTCTTTGTAGTCGAT 58.616 36.000 0.00 0.00 36.60 3.59
2269 3747 8.678593 AGAGACTGAGACGACATATTATGTTA 57.321 34.615 10.55 0.00 45.03 2.41
2272 3750 7.195839 TGAGAGACTGAGACGACATATTATG 57.804 40.000 2.03 2.03 0.00 1.90
2275 3753 5.883115 TCTTGAGAGACTGAGACGACATATT 59.117 40.000 0.00 0.00 0.00 1.28
2278 3756 3.680490 TCTTGAGAGACTGAGACGACAT 58.320 45.455 0.00 0.00 0.00 3.06
2281 3759 5.092554 AGTATCTTGAGAGACTGAGACGA 57.907 43.478 7.44 0.00 44.06 4.20
2301 3779 6.372659 CACATGCATGGTCTACTCTTTTAAGT 59.627 38.462 29.41 0.09 0.00 2.24
2304 3782 5.643348 CACACATGCATGGTCTACTCTTTTA 59.357 40.000 29.41 0.00 0.00 1.52
2310 3788 3.423539 AACACACATGCATGGTCTACT 57.576 42.857 29.41 5.49 0.00 2.57
2311 3789 4.454161 TGTAAACACACATGCATGGTCTAC 59.546 41.667 29.41 18.25 0.00 2.59
2315 3793 3.485394 TCTGTAAACACACATGCATGGT 58.515 40.909 29.41 20.67 0.00 3.55
2316 3794 3.752747 TCTCTGTAAACACACATGCATGG 59.247 43.478 29.41 20.05 0.00 3.66
2317 3795 5.122711 TCATCTCTGTAAACACACATGCATG 59.877 40.000 25.09 25.09 0.00 4.06
2318 3796 5.247862 TCATCTCTGTAAACACACATGCAT 58.752 37.500 0.00 0.00 0.00 3.96
2321 3799 7.137490 ACATTCATCTCTGTAAACACACATG 57.863 36.000 0.00 0.00 0.00 3.21
2395 3875 5.057819 TGGCAACGTGTGATCTTTTTAGTA 58.942 37.500 0.00 0.00 42.51 1.82
2416 3897 1.949525 GGCTAATGTGCAGGTACATGG 59.050 52.381 9.91 2.46 40.24 3.66
2418 3899 1.484653 TCGGCTAATGTGCAGGTACAT 59.515 47.619 0.00 0.00 42.82 2.29
2421 3902 1.134818 CACTCGGCTAATGTGCAGGTA 60.135 52.381 0.00 0.00 34.04 3.08
2422 3903 0.391661 CACTCGGCTAATGTGCAGGT 60.392 55.000 0.00 0.00 34.04 4.00
2423 3904 0.391661 ACACTCGGCTAATGTGCAGG 60.392 55.000 0.00 0.00 35.33 4.85
2429 3910 4.084223 ACGTGTTTTTACACTCGGCTAATG 60.084 41.667 6.83 0.00 37.85 1.90
2430 3911 4.060205 ACGTGTTTTTACACTCGGCTAAT 58.940 39.130 6.83 0.00 37.85 1.73
2437 3918 6.201556 TCGATAACACGTGTTTTTACACTC 57.798 37.500 36.26 19.50 39.31 3.51
2451 3932 5.574055 TCGACTTACACCATTTCGATAACAC 59.426 40.000 0.00 0.00 33.95 3.32
2456 3937 4.451629 ACTCGACTTACACCATTTCGAT 57.548 40.909 0.00 0.00 38.01 3.59
2480 3961 2.806244 GTTACCGTGTGTGCTTTGATCT 59.194 45.455 0.00 0.00 0.00 2.75
2496 3977 5.729974 AAGTCGAGTTCACTTTTGTTACC 57.270 39.130 0.00 0.00 29.29 2.85
2521 4002 2.416972 CGGCCTCTTGACTTACTGGTAC 60.417 54.545 0.00 0.00 0.00 3.34
2534 4015 1.029681 GTGTTTTTCCACGGCCTCTT 58.970 50.000 0.00 0.00 0.00 2.85
2544 4025 3.131400 TGTGTAAGCCAAGGTGTTTTTCC 59.869 43.478 0.00 0.00 0.00 3.13
2591 4072 5.531659 TCGACTGAAGACCTAAGATACATCC 59.468 44.000 0.00 0.00 0.00 3.51
2592 4073 6.261381 AGTCGACTGAAGACCTAAGATACATC 59.739 42.308 19.30 0.00 39.31 3.06
2593 4074 6.038825 CAGTCGACTGAAGACCTAAGATACAT 59.961 42.308 36.73 0.00 46.59 2.29
2594 4075 5.354513 CAGTCGACTGAAGACCTAAGATACA 59.645 44.000 36.73 0.00 46.59 2.29
2595 4076 5.812652 CAGTCGACTGAAGACCTAAGATAC 58.187 45.833 36.73 0.00 46.59 2.24
2597 4078 4.974368 CAGTCGACTGAAGACCTAAGAT 57.026 45.455 36.73 0.00 46.59 2.40
2606 4087 9.542809 ACTTGGTTAAGTCTCAGTCGACTGAAG 62.543 44.444 39.25 31.96 45.14 3.02
2607 4088 7.855881 ACTTGGTTAAGTCTCAGTCGACTGAA 61.856 42.308 39.25 28.85 45.14 3.02
2608 4089 6.438740 ACTTGGTTAAGTCTCAGTCGACTGA 61.439 44.000 38.24 38.24 45.53 3.41
2609 4090 3.917329 TGGTTAAGTCTCAGTCGACTG 57.083 47.619 34.76 34.76 43.14 3.51
2610 4091 3.890147 ACTTGGTTAAGTCTCAGTCGACT 59.110 43.478 13.58 13.58 43.53 4.18
2611 4092 4.240175 ACTTGGTTAAGTCTCAGTCGAC 57.760 45.455 7.70 7.70 43.53 4.20
2622 4103 6.867662 ACACTTGATTGAGACTTGGTTAAG 57.132 37.500 0.00 0.00 39.86 1.85
2623 4104 7.639113 AAACACTTGATTGAGACTTGGTTAA 57.361 32.000 0.00 0.00 0.00 2.01
2624 4105 7.639113 AAAACACTTGATTGAGACTTGGTTA 57.361 32.000 0.00 0.00 0.00 2.85
2625 4106 6.530019 AAAACACTTGATTGAGACTTGGTT 57.470 33.333 0.00 0.00 0.00 3.67
2626 4107 6.828785 ACTAAAACACTTGATTGAGACTTGGT 59.171 34.615 0.00 0.00 0.00 3.67
2627 4108 7.264373 ACTAAAACACTTGATTGAGACTTGG 57.736 36.000 0.00 0.00 0.00 3.61
2665 4146 9.946418 CGTACGAAAATTTTCTTTTCAGTTTTT 57.054 25.926 24.53 0.14 38.07 1.94
2666 4147 9.344309 TCGTACGAAAATTTTCTTTTCAGTTTT 57.656 25.926 24.53 0.43 38.07 2.43
2667 4148 8.898983 TCGTACGAAAATTTTCTTTTCAGTTT 57.101 26.923 24.53 4.50 38.07 2.66
2668 4149 8.898983 TTCGTACGAAAATTTTCTTTTCAGTT 57.101 26.923 27.40 5.34 38.07 3.16
2669 4150 8.953990 CATTCGTACGAAAATTTTCTTTTCAGT 58.046 29.630 32.12 17.00 38.07 3.41
2670 4151 8.953990 ACATTCGTACGAAAATTTTCTTTTCAG 58.046 29.630 32.12 12.80 38.07 3.02
2671 4152 8.844441 ACATTCGTACGAAAATTTTCTTTTCA 57.156 26.923 32.12 6.88 38.07 2.69
2672 4153 8.414923 GGACATTCGTACGAAAATTTTCTTTTC 58.585 33.333 32.12 15.97 37.69 2.29
2673 4154 7.916450 TGGACATTCGTACGAAAATTTTCTTTT 59.084 29.630 32.12 10.89 37.69 2.27
2674 4155 7.419204 TGGACATTCGTACGAAAATTTTCTTT 58.581 30.769 32.12 11.63 37.69 2.52
2675 4156 6.961576 TGGACATTCGTACGAAAATTTTCTT 58.038 32.000 32.12 19.24 37.69 2.52
2676 4157 6.548441 TGGACATTCGTACGAAAATTTTCT 57.452 33.333 32.12 13.09 37.69 2.52
2677 4158 6.237201 GCATGGACATTCGTACGAAAATTTTC 60.237 38.462 32.12 21.59 37.69 2.29
2678 4159 5.571357 GCATGGACATTCGTACGAAAATTTT 59.429 36.000 32.12 14.56 37.69 1.82
2679 4160 5.092781 GCATGGACATTCGTACGAAAATTT 58.907 37.500 32.12 14.94 37.69 1.82
2680 4161 4.155099 TGCATGGACATTCGTACGAAAATT 59.845 37.500 32.12 19.64 37.69 1.82
2681 4162 3.687212 TGCATGGACATTCGTACGAAAAT 59.313 39.130 32.12 23.05 37.69 1.82
2682 4163 3.067833 TGCATGGACATTCGTACGAAAA 58.932 40.909 32.12 13.54 37.69 2.29
2683 4164 2.689646 TGCATGGACATTCGTACGAAA 58.310 42.857 32.12 17.33 37.69 3.46
2684 4165 2.371910 TGCATGGACATTCGTACGAA 57.628 45.000 30.85 30.85 38.59 3.85
2685 4166 2.371910 TTGCATGGACATTCGTACGA 57.628 45.000 15.28 15.28 0.00 3.43
2686 4167 3.463533 TTTTGCATGGACATTCGTACG 57.536 42.857 9.53 9.53 0.00 3.67
2687 4168 4.980590 TGATTTTGCATGGACATTCGTAC 58.019 39.130 0.00 0.00 0.00 3.67
2688 4169 5.635417 TTGATTTTGCATGGACATTCGTA 57.365 34.783 0.00 0.00 0.00 3.43
2689 4170 4.517952 TTGATTTTGCATGGACATTCGT 57.482 36.364 0.00 0.00 0.00 3.85
2690 4171 5.162794 TCTTTGATTTTGCATGGACATTCG 58.837 37.500 0.00 0.00 0.00 3.34
2691 4172 7.424227 TTTCTTTGATTTTGCATGGACATTC 57.576 32.000 0.00 0.00 0.00 2.67
2692 4173 7.989416 ATTTCTTTGATTTTGCATGGACATT 57.011 28.000 0.00 0.00 0.00 2.71
2694 4175 9.806203 CTATATTTCTTTGATTTTGCATGGACA 57.194 29.630 0.00 0.00 0.00 4.02
2695 4176 8.758715 GCTATATTTCTTTGATTTTGCATGGAC 58.241 33.333 0.00 0.00 0.00 4.02
2696 4177 8.476447 TGCTATATTTCTTTGATTTTGCATGGA 58.524 29.630 0.00 0.00 0.00 3.41
2697 4178 8.651391 TGCTATATTTCTTTGATTTTGCATGG 57.349 30.769 0.00 0.00 0.00 3.66
2700 4181 9.872721 TCAATGCTATATTTCTTTGATTTTGCA 57.127 25.926 0.00 0.00 0.00 4.08
2706 4187 9.842775 TCTCAGTCAATGCTATATTTCTTTGAT 57.157 29.630 7.80 0.00 31.87 2.57
2707 4188 9.842775 ATCTCAGTCAATGCTATATTTCTTTGA 57.157 29.630 0.00 0.00 0.00 2.69
2716 4197 9.702494 CTTCATTGTATCTCAGTCAATGCTATA 57.298 33.333 10.87 0.00 44.30 1.31
2717 4198 8.209584 ACTTCATTGTATCTCAGTCAATGCTAT 58.790 33.333 10.87 0.00 44.30 2.97
2718 4199 7.559486 ACTTCATTGTATCTCAGTCAATGCTA 58.441 34.615 10.87 3.34 44.30 3.49
2719 4200 6.413052 ACTTCATTGTATCTCAGTCAATGCT 58.587 36.000 10.87 0.00 44.30 3.79
2720 4201 6.538021 AGACTTCATTGTATCTCAGTCAATGC 59.462 38.462 10.87 0.46 44.30 3.56
2721 4202 9.591792 TTAGACTTCATTGTATCTCAGTCAATG 57.408 33.333 9.81 9.81 45.31 2.82
2722 4203 9.814899 CTTAGACTTCATTGTATCTCAGTCAAT 57.185 33.333 0.00 0.00 32.93 2.57
2723 4204 8.807118 ACTTAGACTTCATTGTATCTCAGTCAA 58.193 33.333 0.00 0.00 0.00 3.18
2724 4205 8.354711 ACTTAGACTTCATTGTATCTCAGTCA 57.645 34.615 0.00 0.00 0.00 3.41
2725 4206 9.081997 CAACTTAGACTTCATTGTATCTCAGTC 57.918 37.037 0.00 0.00 27.99 3.51
2726 4207 8.807118 TCAACTTAGACTTCATTGTATCTCAGT 58.193 33.333 0.00 0.00 29.03 3.41
2727 4208 9.081997 GTCAACTTAGACTTCATTGTATCTCAG 57.918 37.037 0.00 0.00 35.65 3.35
2728 4209 8.807118 AGTCAACTTAGACTTCATTGTATCTCA 58.193 33.333 0.00 0.00 46.26 3.27
2729 4210 9.081997 CAGTCAACTTAGACTTCATTGTATCTC 57.918 37.037 0.00 0.00 46.26 2.75
2730 4211 8.807118 TCAGTCAACTTAGACTTCATTGTATCT 58.193 33.333 0.00 0.00 46.26 1.98
2731 4212 8.988064 TCAGTCAACTTAGACTTCATTGTATC 57.012 34.615 0.00 0.00 46.26 2.24
2732 4213 8.807118 TCTCAGTCAACTTAGACTTCATTGTAT 58.193 33.333 0.00 0.00 46.26 2.29
2733 4214 8.082852 GTCTCAGTCAACTTAGACTTCATTGTA 58.917 37.037 14.42 0.00 46.26 2.41
2734 4215 6.926272 GTCTCAGTCAACTTAGACTTCATTGT 59.074 38.462 14.42 0.00 46.26 2.71
2735 4216 7.344910 GTCTCAGTCAACTTAGACTTCATTG 57.655 40.000 14.42 0.00 46.26 2.82
2745 4226 7.224753 CAGTTTTGCTAAGTCTCAGTCAACTTA 59.775 37.037 0.00 0.00 37.02 2.24
2746 4227 6.037610 CAGTTTTGCTAAGTCTCAGTCAACTT 59.962 38.462 0.00 0.00 39.07 2.66
2747 4228 5.525378 CAGTTTTGCTAAGTCTCAGTCAACT 59.475 40.000 0.00 0.00 0.00 3.16
2748 4229 5.523916 TCAGTTTTGCTAAGTCTCAGTCAAC 59.476 40.000 0.00 0.00 0.00 3.18
2749 4230 5.670485 TCAGTTTTGCTAAGTCTCAGTCAA 58.330 37.500 0.00 0.00 0.00 3.18
2750 4231 5.276461 TCAGTTTTGCTAAGTCTCAGTCA 57.724 39.130 0.00 0.00 0.00 3.41
2751 4232 6.793492 ATTCAGTTTTGCTAAGTCTCAGTC 57.207 37.500 0.00 0.00 0.00 3.51
2752 4233 7.573968 AAATTCAGTTTTGCTAAGTCTCAGT 57.426 32.000 0.00 0.00 0.00 3.41
2753 4234 9.950680 TTTAAATTCAGTTTTGCTAAGTCTCAG 57.049 29.630 0.00 0.00 0.00 3.35
2760 4241 9.752961 GGGTACTTTTAAATTCAGTTTTGCTAA 57.247 29.630 0.00 0.00 0.00 3.09
2761 4242 8.077386 CGGGTACTTTTAAATTCAGTTTTGCTA 58.923 33.333 0.00 0.00 0.00 3.49
2762 4243 6.921307 CGGGTACTTTTAAATTCAGTTTTGCT 59.079 34.615 0.00 0.00 0.00 3.91
2763 4244 6.144886 CCGGGTACTTTTAAATTCAGTTTTGC 59.855 38.462 0.00 0.00 0.00 3.68
2764 4245 7.204604 ACCGGGTACTTTTAAATTCAGTTTTG 58.795 34.615 6.32 0.00 0.00 2.44
2765 4246 7.350744 ACCGGGTACTTTTAAATTCAGTTTT 57.649 32.000 6.32 0.00 0.00 2.43
2766 4247 6.964807 ACCGGGTACTTTTAAATTCAGTTT 57.035 33.333 6.32 0.00 0.00 2.66
2767 4248 6.964807 AACCGGGTACTTTTAAATTCAGTT 57.035 33.333 6.32 0.00 0.00 3.16
2768 4249 6.964807 AAACCGGGTACTTTTAAATTCAGT 57.035 33.333 6.32 0.00 0.00 3.41
2769 4250 7.873910 TGTAAACCGGGTACTTTTAAATTCAG 58.126 34.615 6.32 0.00 0.00 3.02
2770 4251 7.814264 TGTAAACCGGGTACTTTTAAATTCA 57.186 32.000 6.32 0.00 0.00 2.57
2771 4252 9.992910 CTATGTAAACCGGGTACTTTTAAATTC 57.007 33.333 6.32 0.00 0.00 2.17
2772 4253 8.959548 CCTATGTAAACCGGGTACTTTTAAATT 58.040 33.333 6.32 0.00 0.00 1.82
2773 4254 7.557358 CCCTATGTAAACCGGGTACTTTTAAAT 59.443 37.037 6.32 4.45 31.89 1.40
2774 4255 6.883756 CCCTATGTAAACCGGGTACTTTTAAA 59.116 38.462 6.32 0.00 31.89 1.52
2775 4256 6.413892 CCCTATGTAAACCGGGTACTTTTAA 58.586 40.000 6.32 0.00 31.89 1.52
2776 4257 5.628899 GCCCTATGTAAACCGGGTACTTTTA 60.629 44.000 6.32 0.00 38.97 1.52
2777 4258 4.847198 CCCTATGTAAACCGGGTACTTTT 58.153 43.478 6.32 0.00 31.89 2.27
2778 4259 3.370846 GCCCTATGTAAACCGGGTACTTT 60.371 47.826 6.32 0.00 38.97 2.66
2779 4260 2.171237 GCCCTATGTAAACCGGGTACTT 59.829 50.000 6.32 8.66 38.97 2.24
2780 4261 1.764723 GCCCTATGTAAACCGGGTACT 59.235 52.381 6.32 0.00 38.97 2.73
2781 4262 1.764723 AGCCCTATGTAAACCGGGTAC 59.235 52.381 6.32 8.60 38.97 3.34
2782 4263 2.041701 GAGCCCTATGTAAACCGGGTA 58.958 52.381 6.32 0.00 38.97 3.69
2783 4264 0.835276 GAGCCCTATGTAAACCGGGT 59.165 55.000 6.32 0.00 38.97 5.28
2784 4265 1.070289 GAGAGCCCTATGTAAACCGGG 59.930 57.143 6.32 0.00 39.76 5.73
2785 4266 1.269621 CGAGAGCCCTATGTAAACCGG 60.270 57.143 0.00 0.00 0.00 5.28
2786 4267 1.269621 CCGAGAGCCCTATGTAAACCG 60.270 57.143 0.00 0.00 0.00 4.44
2787 4268 1.070289 CCCGAGAGCCCTATGTAAACC 59.930 57.143 0.00 0.00 0.00 3.27
2788 4269 1.761198 ACCCGAGAGCCCTATGTAAAC 59.239 52.381 0.00 0.00 0.00 2.01
2789 4270 2.170012 ACCCGAGAGCCCTATGTAAA 57.830 50.000 0.00 0.00 0.00 2.01
2790 4271 2.091720 TGTACCCGAGAGCCCTATGTAA 60.092 50.000 0.00 0.00 0.00 2.41
2791 4272 1.496001 TGTACCCGAGAGCCCTATGTA 59.504 52.381 0.00 0.00 0.00 2.29
2792 4273 0.260816 TGTACCCGAGAGCCCTATGT 59.739 55.000 0.00 0.00 0.00 2.29
2793 4274 1.633774 ATGTACCCGAGAGCCCTATG 58.366 55.000 0.00 0.00 0.00 2.23
2794 4275 2.400467 AATGTACCCGAGAGCCCTAT 57.600 50.000 0.00 0.00 0.00 2.57
2795 4276 2.037144 GAAATGTACCCGAGAGCCCTA 58.963 52.381 0.00 0.00 0.00 3.53
2796 4277 0.831307 GAAATGTACCCGAGAGCCCT 59.169 55.000 0.00 0.00 0.00 5.19
2797 4278 0.831307 AGAAATGTACCCGAGAGCCC 59.169 55.000 0.00 0.00 0.00 5.19
2798 4279 2.693267 AAGAAATGTACCCGAGAGCC 57.307 50.000 0.00 0.00 0.00 4.70
2799 4280 3.118884 TGGTAAGAAATGTACCCGAGAGC 60.119 47.826 0.00 0.00 40.38 4.09
2800 4281 4.430908 GTGGTAAGAAATGTACCCGAGAG 58.569 47.826 0.00 0.00 40.38 3.20
2801 4282 3.196254 GGTGGTAAGAAATGTACCCGAGA 59.804 47.826 0.00 0.00 40.38 4.04
2802 4283 3.197116 AGGTGGTAAGAAATGTACCCGAG 59.803 47.826 0.00 0.00 40.38 4.63
2803 4284 3.055675 CAGGTGGTAAGAAATGTACCCGA 60.056 47.826 0.00 0.00 40.38 5.14
2804 4285 3.267483 CAGGTGGTAAGAAATGTACCCG 58.733 50.000 0.00 0.00 40.38 5.28
2805 4286 3.617284 CCAGGTGGTAAGAAATGTACCC 58.383 50.000 0.00 0.00 40.38 3.69
2806 4287 3.014623 GCCAGGTGGTAAGAAATGTACC 58.985 50.000 0.00 0.00 41.32 3.34
2807 4288 3.014623 GGCCAGGTGGTAAGAAATGTAC 58.985 50.000 0.00 0.00 37.57 2.90
2808 4289 2.355310 CGGCCAGGTGGTAAGAAATGTA 60.355 50.000 2.24 0.00 37.57 2.29
2809 4290 1.613255 CGGCCAGGTGGTAAGAAATGT 60.613 52.381 2.24 0.00 37.57 2.71
2810 4291 1.094785 CGGCCAGGTGGTAAGAAATG 58.905 55.000 2.24 0.00 37.57 2.32
2811 4292 0.696501 ACGGCCAGGTGGTAAGAAAT 59.303 50.000 2.24 0.00 37.57 2.17
2812 4293 0.035739 GACGGCCAGGTGGTAAGAAA 59.964 55.000 2.24 0.00 37.57 2.52
2813 4294 1.675219 GACGGCCAGGTGGTAAGAA 59.325 57.895 2.24 0.00 37.57 2.52
2814 4295 2.642254 CGACGGCCAGGTGGTAAGA 61.642 63.158 2.24 0.00 37.57 2.10
2815 4296 2.125673 CGACGGCCAGGTGGTAAG 60.126 66.667 2.24 0.00 37.57 2.34
2816 4297 2.918802 ACGACGGCCAGGTGGTAA 60.919 61.111 2.24 0.00 37.57 2.85
2817 4298 3.376078 GACGACGGCCAGGTGGTA 61.376 66.667 2.24 0.00 37.57 3.25
2828 4309 2.504743 CGTTAAACGCACGGACGACG 62.505 60.000 6.34 4.57 41.35 5.12
2829 4310 1.126438 CGTTAAACGCACGGACGAC 59.874 57.895 6.34 0.00 33.65 4.34
2830 4311 3.524873 CGTTAAACGCACGGACGA 58.475 55.556 6.34 0.00 33.65 4.20
2835 4316 1.058284 GCTAGCCGTTAAACGCACG 59.942 57.895 2.29 0.00 40.91 5.34
2836 4317 1.058284 CGCTAGCCGTTAAACGCAC 59.942 57.895 9.66 0.00 40.91 5.34
2837 4318 2.732670 GCGCTAGCCGTTAAACGCA 61.733 57.895 9.66 0.00 45.25 5.24
2838 4319 2.020969 GCGCTAGCCGTTAAACGC 59.979 61.111 9.66 0.00 40.91 4.84
2839 4320 2.153945 TCGCGCTAGCCGTTAAACG 61.154 57.895 20.20 9.24 42.11 3.60
2840 4321 1.342810 GTCGCGCTAGCCGTTAAAC 59.657 57.895 20.20 10.77 41.18 2.01
2841 4322 2.153945 CGTCGCGCTAGCCGTTAAA 61.154 57.895 20.20 3.83 41.18 1.52
2842 4323 2.577644 CGTCGCGCTAGCCGTTAA 60.578 61.111 20.20 4.12 41.18 2.01
2843 4324 4.541482 CCGTCGCGCTAGCCGTTA 62.541 66.667 20.20 4.71 41.18 3.18
2849 4330 2.809601 AAACTGCCGTCGCGCTAG 60.810 61.111 5.56 0.00 38.08 3.42
2850 4331 2.475098 TACAAACTGCCGTCGCGCTA 62.475 55.000 5.56 0.00 38.08 4.26
2851 4332 3.734682 TATACAAACTGCCGTCGCGCT 62.735 52.381 5.56 0.00 38.08 5.92
2852 4333 1.415288 TATACAAACTGCCGTCGCGC 61.415 55.000 0.00 0.00 38.08 6.86
2853 4334 0.993532 TTATACAAACTGCCGTCGCG 59.006 50.000 0.00 0.00 38.08 5.87
2854 4335 2.475022 GGTTTATACAAACTGCCGTCGC 60.475 50.000 0.00 0.00 43.06 5.19
2855 4336 2.222640 CGGTTTATACAAACTGCCGTCG 60.223 50.000 0.00 0.00 42.51 5.12
2856 4337 2.995258 TCGGTTTATACAAACTGCCGTC 59.005 45.455 0.28 0.00 46.44 4.79
2857 4338 2.997986 CTCGGTTTATACAAACTGCCGT 59.002 45.455 0.28 0.00 46.44 5.68
2858 4339 2.997986 ACTCGGTTTATACAAACTGCCG 59.002 45.455 0.28 0.00 46.44 5.69
2859 4340 4.931002 TGTACTCGGTTTATACAAACTGCC 59.069 41.667 0.28 0.00 46.44 4.85
2860 4341 5.406175 TGTGTACTCGGTTTATACAAACTGC 59.594 40.000 0.28 0.00 46.44 4.40
2862 4343 5.630680 CGTGTGTACTCGGTTTATACAAACT 59.369 40.000 0.00 0.00 43.06 2.66
2863 4344 5.402270 ACGTGTGTACTCGGTTTATACAAAC 59.598 40.000 10.63 0.00 42.82 2.93
2864 4345 5.527951 ACGTGTGTACTCGGTTTATACAAA 58.472 37.500 10.63 0.00 37.19 2.83
2865 4346 5.119931 ACGTGTGTACTCGGTTTATACAA 57.880 39.130 10.63 0.00 37.19 2.41
2866 4347 4.764679 ACGTGTGTACTCGGTTTATACA 57.235 40.909 10.63 0.00 37.19 2.29
2867 4348 5.682862 CCATACGTGTGTACTCGGTTTATAC 59.317 44.000 11.57 0.00 37.19 1.47
2868 4349 5.733091 GCCATACGTGTGTACTCGGTTTATA 60.733 44.000 11.57 0.00 37.19 0.98
2869 4350 4.675510 CCATACGTGTGTACTCGGTTTAT 58.324 43.478 11.57 0.00 37.19 1.40
2870 4351 3.673052 GCCATACGTGTGTACTCGGTTTA 60.673 47.826 11.57 0.00 37.19 2.01
2871 4352 2.927871 GCCATACGTGTGTACTCGGTTT 60.928 50.000 11.57 0.00 37.19 3.27
2872 4353 1.403249 GCCATACGTGTGTACTCGGTT 60.403 52.381 11.57 0.00 37.19 4.44
2873 4354 0.171903 GCCATACGTGTGTACTCGGT 59.828 55.000 11.57 0.00 37.19 4.69
2874 4355 0.454600 AGCCATACGTGTGTACTCGG 59.545 55.000 11.57 0.00 37.19 4.63
2875 4356 1.400846 AGAGCCATACGTGTGTACTCG 59.599 52.381 19.66 5.09 38.62 4.18
2876 4357 2.539142 CGAGAGCCATACGTGTGTACTC 60.539 54.545 18.77 18.77 32.26 2.59
2877 4358 1.400846 CGAGAGCCATACGTGTGTACT 59.599 52.381 11.57 8.07 32.26 2.73
2878 4359 1.533338 CCGAGAGCCATACGTGTGTAC 60.533 57.143 11.57 3.16 32.26 2.90
2879 4360 0.736636 CCGAGAGCCATACGTGTGTA 59.263 55.000 11.57 0.00 34.45 2.90
2880 4361 0.963856 TCCGAGAGCCATACGTGTGT 60.964 55.000 11.57 0.00 0.00 3.72
2881 4362 0.385751 ATCCGAGAGCCATACGTGTG 59.614 55.000 5.16 5.16 0.00 3.82
2882 4363 1.112113 AATCCGAGAGCCATACGTGT 58.888 50.000 0.00 0.00 0.00 4.49
2883 4364 3.577649 ATAATCCGAGAGCCATACGTG 57.422 47.619 0.00 0.00 0.00 4.49
2884 4365 5.916661 AATATAATCCGAGAGCCATACGT 57.083 39.130 0.00 0.00 0.00 3.57
2885 4366 7.596749 AAAAATATAATCCGAGAGCCATACG 57.403 36.000 0.00 0.00 0.00 3.06
2910 4391 9.088987 TCCTGCTTTACAAAGGAAAGAAATAAT 57.911 29.630 5.92 0.00 37.16 1.28
2911 4392 8.357402 GTCCTGCTTTACAAAGGAAAGAAATAA 58.643 33.333 5.92 0.00 41.70 1.40
2912 4393 7.504238 TGTCCTGCTTTACAAAGGAAAGAAATA 59.496 33.333 5.92 0.00 41.70 1.40
2913 4394 6.323739 TGTCCTGCTTTACAAAGGAAAGAAAT 59.676 34.615 5.92 0.00 41.70 2.17
2914 4395 5.654650 TGTCCTGCTTTACAAAGGAAAGAAA 59.345 36.000 5.92 0.00 41.70 2.52
2915 4396 5.067283 GTGTCCTGCTTTACAAAGGAAAGAA 59.933 40.000 5.92 0.00 41.70 2.52
2916 4397 4.578928 GTGTCCTGCTTTACAAAGGAAAGA 59.421 41.667 5.92 0.00 41.70 2.52
2917 4398 4.554723 CGTGTCCTGCTTTACAAAGGAAAG 60.555 45.833 4.01 0.00 41.70 2.62
2918 4399 3.314080 CGTGTCCTGCTTTACAAAGGAAA 59.686 43.478 4.01 0.00 41.70 3.13
2919 4400 2.875933 CGTGTCCTGCTTTACAAAGGAA 59.124 45.455 4.01 0.00 41.70 3.36
2920 4401 2.489971 CGTGTCCTGCTTTACAAAGGA 58.510 47.619 4.01 0.04 37.78 3.36
2921 4402 1.069227 GCGTGTCCTGCTTTACAAAGG 60.069 52.381 4.01 0.00 36.53 3.11
2922 4403 1.873591 AGCGTGTCCTGCTTTACAAAG 59.126 47.619 0.00 0.00 40.48 2.77
2923 4404 1.961793 AGCGTGTCCTGCTTTACAAA 58.038 45.000 0.00 0.00 40.48 2.83
2924 4405 3.698250 AGCGTGTCCTGCTTTACAA 57.302 47.368 0.00 0.00 40.48 2.41
2941 4422 3.243177 GTGTAAATAGAAGCGAGGCGAAG 59.757 47.826 0.00 0.00 0.00 3.79
2942 4423 3.119245 AGTGTAAATAGAAGCGAGGCGAA 60.119 43.478 0.00 0.00 0.00 4.70
2943 4424 2.426024 AGTGTAAATAGAAGCGAGGCGA 59.574 45.455 0.00 0.00 0.00 5.54
2944 4425 2.789893 GAGTGTAAATAGAAGCGAGGCG 59.210 50.000 0.00 0.00 0.00 5.52
2945 4426 3.782046 TGAGTGTAAATAGAAGCGAGGC 58.218 45.455 0.00 0.00 0.00 4.70
2946 4427 3.799420 GCTGAGTGTAAATAGAAGCGAGG 59.201 47.826 0.00 0.00 0.00 4.63
2947 4428 4.677584 AGCTGAGTGTAAATAGAAGCGAG 58.322 43.478 0.00 0.00 34.43 5.03
2948 4429 4.720649 AGCTGAGTGTAAATAGAAGCGA 57.279 40.909 0.00 0.00 34.43 4.93
2949 4430 5.052304 CGTAAGCTGAGTGTAAATAGAAGCG 60.052 44.000 0.00 0.00 34.43 4.68
2950 4431 6.262323 CGTAAGCTGAGTGTAAATAGAAGC 57.738 41.667 0.00 0.00 0.00 3.86
2968 4449 6.090088 GCCATGATCTATAACTCAAGCGTAAG 59.910 42.308 0.00 0.00 43.44 2.34
2969 4450 5.926542 GCCATGATCTATAACTCAAGCGTAA 59.073 40.000 0.00 0.00 0.00 3.18
2970 4451 5.243954 AGCCATGATCTATAACTCAAGCGTA 59.756 40.000 0.00 0.00 32.80 4.42
2971 4452 4.039730 AGCCATGATCTATAACTCAAGCGT 59.960 41.667 0.00 0.00 32.80 5.07
2972 4453 4.564041 AGCCATGATCTATAACTCAAGCG 58.436 43.478 0.00 0.00 32.80 4.68
2973 4454 5.580297 GCTAGCCATGATCTATAACTCAAGC 59.420 44.000 2.29 0.00 0.00 4.01
2974 4455 6.105333 GGCTAGCCATGATCTATAACTCAAG 58.895 44.000 29.33 0.00 35.81 3.02
2975 4456 5.543790 TGGCTAGCCATGATCTATAACTCAA 59.456 40.000 32.88 3.09 41.89 3.02
2976 4457 5.086621 TGGCTAGCCATGATCTATAACTCA 58.913 41.667 32.88 3.52 41.89 3.41
2977 4458 5.667539 TGGCTAGCCATGATCTATAACTC 57.332 43.478 32.88 0.64 41.89 3.01
2991 4472 4.175337 TCGGGTGCATGGCTAGCC 62.175 66.667 27.71 27.71 0.00 3.93
2992 4473 2.897350 GTCGGGTGCATGGCTAGC 60.897 66.667 6.04 6.04 0.00 3.42
2993 4474 2.203070 GGTCGGGTGCATGGCTAG 60.203 66.667 0.00 0.00 0.00 3.42
2994 4475 3.792736 GGGTCGGGTGCATGGCTA 61.793 66.667 0.00 0.00 0.00 3.93
2997 4478 4.047125 AAGGGGTCGGGTGCATGG 62.047 66.667 0.00 0.00 0.00 3.66


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.