Multiple sequence alignment - TraesCS2A01G589400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G589400 chr2A 100.000 2538 0 0 1 2538 778159130 778161667 0.000000e+00 4687
1 TraesCS2A01G589400 chr2A 89.231 195 17 4 1993 2185 778806787 778806979 9.070000e-60 241
2 TraesCS2A01G589400 chr2D 86.973 1067 55 36 783 1778 635089942 635088889 0.000000e+00 1123
3 TraesCS2A01G589400 chr2D 88.095 210 14 8 1417 1619 564406024 564405819 3.260000e-59 239
4 TraesCS2A01G589400 chr2B 88.817 921 43 26 742 1619 779041267 779040364 0.000000e+00 1075
5 TraesCS2A01G589400 chr2B 91.682 553 36 7 1 553 779042057 779041515 0.000000e+00 758
6 TraesCS2A01G589400 chr2B 88.400 250 14 3 1974 2208 779039990 779039741 1.150000e-73 287
7 TraesCS2A01G589400 chr2B 91.473 129 11 0 2076 2204 778990799 778990671 7.220000e-41 178
8 TraesCS2A01G589400 chr5B 84.580 655 56 14 1002 1619 162827151 162826505 2.160000e-170 608
9 TraesCS2A01G589400 chr5B 86.905 504 45 14 1 502 264913240 264912756 1.720000e-151 545
10 TraesCS2A01G589400 chr5B 85.743 505 53 15 1 502 425667113 425667601 1.350000e-142 516
11 TraesCS2A01G589400 chr5B 86.667 135 13 3 471 604 264912755 264912625 7.320000e-31 145
12 TraesCS2A01G589400 chr3B 86.931 505 48 14 1 502 174464416 174463927 3.690000e-153 551
13 TraesCS2A01G589400 chr1B 86.337 505 51 13 1 502 656527317 656526828 3.720000e-148 534
14 TraesCS2A01G589400 chr7B 85.632 522 44 15 1024 1529 505000684 505000178 1.040000e-143 520
15 TraesCS2A01G589400 chr7D 85.289 537 40 10 1024 1529 451488131 451487603 3.740000e-143 518
16 TraesCS2A01G589400 chr4D 91.395 337 21 6 1194 1529 16298662 16298333 2.980000e-124 455
17 TraesCS2A01G589400 chr4D 91.098 337 22 6 1194 1529 16323877 16323548 1.380000e-122 449
18 TraesCS2A01G589400 chr6B 91.139 316 20 5 1215 1529 620275469 620275161 3.020000e-114 422
19 TraesCS2A01G589400 chr6B 83.333 216 30 6 173 386 608997323 608997534 7.160000e-46 195
20 TraesCS2A01G589400 chr1D 92.273 220 14 1 1207 1426 21734049 21733833 2.450000e-80 309
21 TraesCS2A01G589400 chr1D 80.769 156 18 7 1024 1177 21739636 21739491 7.420000e-21 111
22 TraesCS2A01G589400 chr1A 80.139 433 60 13 173 603 525006296 525005888 1.480000e-77 300
23 TraesCS2A01G589400 chr1A 80.139 433 60 13 173 603 525007311 525006903 1.480000e-77 300
24 TraesCS2A01G589400 chr1A 79.398 432 60 15 173 602 525004299 525003895 6.920000e-71 278
25 TraesCS2A01G589400 chr1A 79.446 433 58 12 173 603 525005310 525004907 6.920000e-71 278
26 TraesCS2A01G589400 chr1A 82.474 194 31 3 1 193 523122307 523122498 1.560000e-37 167
27 TraesCS2A01G589400 chr1A 81.347 193 35 1 1 193 525007518 525007327 3.380000e-34 156
28 TraesCS2A01G589400 chr1A 80.829 193 35 2 1 193 525006502 525006312 1.570000e-32 150
29 TraesCS2A01G589400 chr1A 80.102 196 25 5 405 600 524984595 524984414 1.580000e-27 134
30 TraesCS2A01G589400 chr1A 94.048 84 5 0 521 604 523124225 523124308 7.370000e-26 128
31 TraesCS2A01G589400 chr6A 84.722 216 28 5 173 386 551639671 551639883 7.110000e-51 211
32 TraesCS2A01G589400 chr6A 82.888 187 27 3 1 183 551639460 551639645 2.020000e-36 163


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G589400 chr2A 778159130 778161667 2537 False 4687.000000 4687 100.000000 1 2538 1 chr2A.!!$F1 2537
1 TraesCS2A01G589400 chr2D 635088889 635089942 1053 True 1123.000000 1123 86.973000 783 1778 1 chr2D.!!$R2 995
2 TraesCS2A01G589400 chr2B 779039741 779042057 2316 True 706.666667 1075 89.633000 1 2208 3 chr2B.!!$R2 2207
3 TraesCS2A01G589400 chr5B 162826505 162827151 646 True 608.000000 608 84.580000 1002 1619 1 chr5B.!!$R1 617
4 TraesCS2A01G589400 chr5B 264912625 264913240 615 True 345.000000 545 86.786000 1 604 2 chr5B.!!$R2 603
5 TraesCS2A01G589400 chr7B 505000178 505000684 506 True 520.000000 520 85.632000 1024 1529 1 chr7B.!!$R1 505
6 TraesCS2A01G589400 chr7D 451487603 451488131 528 True 518.000000 518 85.289000 1024 1529 1 chr7D.!!$R1 505
7 TraesCS2A01G589400 chr1A 525003895 525007518 3623 True 243.666667 300 80.216333 1 603 6 chr1A.!!$R2 602

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
707 1865 0.10412 CCGCCCTGTTGATCGATACA 59.896 55.0 0.0 0.0 0.0 2.29 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2290 5682 0.036577 GGTGACACTCAGCTCAGCAT 60.037 55.0 0.0 0.0 41.34 3.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
44 45 2.191802 GTCAGTGAGTGATGCATCTCG 58.808 52.381 26.32 10.56 37.56 4.04
55 56 4.620609 GTGATGCATCTCGTCTCATGATAC 59.379 45.833 26.32 8.52 0.00 2.24
77 78 2.288457 ACCTCCGCATACATCATCGAAG 60.288 50.000 0.00 0.00 0.00 3.79
151 152 1.881973 TGATTGAGGCAAAGTCTGTGC 59.118 47.619 6.44 6.44 41.45 4.57
207 1260 4.346734 ACTGCTTGCTCATTTATTGACG 57.653 40.909 0.00 0.00 0.00 4.35
208 1261 3.103738 CTGCTTGCTCATTTATTGACGC 58.896 45.455 0.00 0.00 0.00 5.19
209 1262 2.487372 TGCTTGCTCATTTATTGACGCA 59.513 40.909 0.00 0.00 36.99 5.24
210 1263 2.848302 GCTTGCTCATTTATTGACGCAC 59.152 45.455 0.00 0.00 37.85 5.34
223 1276 1.503818 GACGCACCTTCCTTCGCAAA 61.504 55.000 0.00 0.00 0.00 3.68
237 1290 7.332213 TCCTTCGCAAAATTCAATCATCATA 57.668 32.000 0.00 0.00 0.00 2.15
264 1317 2.291153 CCCTCCATGTTCACATTCACCT 60.291 50.000 0.00 0.00 33.61 4.00
290 1343 1.193323 CTGACCTCATCCTGAGCACT 58.807 55.000 0.00 0.00 42.98 4.40
297 1350 3.603532 CTCATCCTGAGCACTGCTAAAA 58.396 45.455 2.71 0.00 39.88 1.52
353 1406 8.788325 AGTATTCCTAGGTCAATGTGTTAAAC 57.212 34.615 9.08 0.00 0.00 2.01
386 1439 7.171508 TCACTTTTAGTATCCATCGATCAATGC 59.828 37.037 0.00 0.00 0.00 3.56
387 1440 6.992123 ACTTTTAGTATCCATCGATCAATGCA 59.008 34.615 0.00 0.00 0.00 3.96
401 1454 4.049546 TCAATGCATAGAATTTGGCAGC 57.950 40.909 0.00 0.00 39.95 5.25
403 1456 0.740149 TGCATAGAATTTGGCAGCGG 59.260 50.000 0.00 0.00 0.00 5.52
439 1492 3.507162 TGAGAATTTGGACTGCAGGAA 57.493 42.857 19.93 7.56 0.00 3.36
473 1526 3.502595 GGGTTCAGACCTTTAGAGTTTGC 59.497 47.826 0.00 0.00 45.75 3.68
474 1527 3.502595 GGTTCAGACCTTTAGAGTTTGCC 59.497 47.826 0.00 0.00 42.99 4.52
504 1557 1.202348 GCAGTTGCTGTATTTGGGGAC 59.798 52.381 0.00 0.00 38.21 4.46
506 1559 4.868752 GCAGTTGCTGTATTTGGGGACAA 61.869 47.826 0.00 0.00 43.11 3.18
557 1715 8.883731 GGGCTACAACTAATTGCATGTATATAG 58.116 37.037 0.00 0.00 39.66 1.31
577 1735 3.369175 AGACATGGTAGTGATCAGCTCA 58.631 45.455 0.00 0.00 0.00 4.26
578 1736 3.384146 AGACATGGTAGTGATCAGCTCAG 59.616 47.826 0.00 0.00 33.51 3.35
579 1737 3.102972 ACATGGTAGTGATCAGCTCAGT 58.897 45.455 0.00 0.00 40.69 3.41
580 1738 3.118847 ACATGGTAGTGATCAGCTCAGTG 60.119 47.826 0.00 0.00 38.06 3.66
581 1739 2.529632 TGGTAGTGATCAGCTCAGTGT 58.470 47.619 0.00 0.00 38.06 3.55
582 1740 2.899900 TGGTAGTGATCAGCTCAGTGTT 59.100 45.455 0.00 0.00 38.06 3.32
583 1741 4.086457 TGGTAGTGATCAGCTCAGTGTTA 58.914 43.478 0.00 0.00 38.06 2.41
584 1742 4.711846 TGGTAGTGATCAGCTCAGTGTTAT 59.288 41.667 0.00 0.00 38.06 1.89
585 1743 5.163509 TGGTAGTGATCAGCTCAGTGTTATC 60.164 44.000 0.00 0.00 38.06 1.75
586 1744 5.163509 GGTAGTGATCAGCTCAGTGTTATCA 60.164 44.000 0.00 0.00 38.06 2.15
587 1745 5.611128 AGTGATCAGCTCAGTGTTATCAT 57.389 39.130 0.00 0.00 36.14 2.45
588 1746 5.987098 AGTGATCAGCTCAGTGTTATCATT 58.013 37.500 0.00 0.00 36.14 2.57
589 1747 7.117285 AGTGATCAGCTCAGTGTTATCATTA 57.883 36.000 0.00 0.00 36.14 1.90
590 1748 7.559486 AGTGATCAGCTCAGTGTTATCATTAA 58.441 34.615 0.00 0.00 36.14 1.40
591 1749 7.493971 AGTGATCAGCTCAGTGTTATCATTAAC 59.506 37.037 0.00 0.00 36.14 2.01
592 1750 7.493971 GTGATCAGCTCAGTGTTATCATTAACT 59.506 37.037 0.00 0.00 35.61 2.24
593 1751 8.695456 TGATCAGCTCAGTGTTATCATTAACTA 58.305 33.333 0.00 0.00 38.81 2.24
594 1752 9.534565 GATCAGCTCAGTGTTATCATTAACTAA 57.465 33.333 0.00 0.00 38.81 2.24
595 1753 9.890629 ATCAGCTCAGTGTTATCATTAACTAAA 57.109 29.630 0.00 0.00 38.81 1.85
596 1754 9.151471 TCAGCTCAGTGTTATCATTAACTAAAC 57.849 33.333 0.00 0.00 38.81 2.01
597 1755 8.391106 CAGCTCAGTGTTATCATTAACTAAACC 58.609 37.037 0.00 0.00 38.81 3.27
598 1756 8.100791 AGCTCAGTGTTATCATTAACTAAACCA 58.899 33.333 0.00 0.00 38.81 3.67
599 1757 8.893727 GCTCAGTGTTATCATTAACTAAACCAT 58.106 33.333 0.00 0.00 38.81 3.55
603 1761 9.855021 AGTGTTATCATTAACTAAACCATTTGC 57.145 29.630 0.00 0.00 38.81 3.68
604 1762 9.855021 GTGTTATCATTAACTAAACCATTTGCT 57.145 29.630 0.00 0.00 38.81 3.91
605 1763 9.853555 TGTTATCATTAACTAAACCATTTGCTG 57.146 29.630 0.00 0.00 38.81 4.41
606 1764 9.301153 GTTATCATTAACTAAACCATTTGCTGG 57.699 33.333 0.00 0.00 41.43 4.85
614 1772 3.963733 CCATTTGCTGGTGGAGAGA 57.036 52.632 0.00 0.00 40.49 3.10
618 1776 2.015456 TTTGCTGGTGGAGAGAGAGA 57.985 50.000 0.00 0.00 0.00 3.10
625 1783 2.031120 GGTGGAGAGAGAGAGGTCATG 58.969 57.143 0.00 0.00 0.00 3.07
630 1788 2.279120 GAGAGAGGTCATGCCGCG 60.279 66.667 0.00 0.00 42.28 6.46
633 1791 1.141019 GAGAGGTCATGCCGCGTTA 59.859 57.895 4.92 0.00 42.28 3.18
637 1795 3.199891 GTCATGCCGCGTTACCCC 61.200 66.667 4.92 0.00 0.00 4.95
650 1808 0.318762 TTACCCCGCAAACATTTGGC 59.681 50.000 6.49 0.00 38.57 4.52
653 1811 2.021039 CCCGCAAACATTTGGCGTG 61.021 57.895 6.91 0.00 38.57 5.34
656 1814 1.595982 CGCAAACATTTGGCGTGTCG 61.596 55.000 6.49 0.00 38.57 4.35
670 1828 2.049802 GTCGTCTCCGGTTTGCGA 60.050 61.111 0.00 5.19 33.95 5.10
671 1829 1.662446 GTCGTCTCCGGTTTGCGAA 60.662 57.895 0.00 0.00 33.30 4.70
673 1831 0.530211 TCGTCTCCGGTTTGCGAAAA 60.530 50.000 0.00 0.00 33.95 2.29
694 1852 1.213296 AATTACATCCAGACCGCCCT 58.787 50.000 0.00 0.00 0.00 5.19
696 1854 0.907704 TTACATCCAGACCGCCCTGT 60.908 55.000 0.00 0.00 32.43 4.00
697 1855 0.907704 TACATCCAGACCGCCCTGTT 60.908 55.000 0.00 0.00 32.43 3.16
698 1856 1.746615 CATCCAGACCGCCCTGTTG 60.747 63.158 0.00 0.00 32.43 3.33
699 1857 1.918293 ATCCAGACCGCCCTGTTGA 60.918 57.895 0.00 0.00 32.43 3.18
700 1858 1.274703 ATCCAGACCGCCCTGTTGAT 61.275 55.000 0.00 0.00 32.43 2.57
701 1859 1.450312 CCAGACCGCCCTGTTGATC 60.450 63.158 0.00 0.00 32.43 2.92
702 1860 1.811266 CAGACCGCCCTGTTGATCG 60.811 63.158 0.00 0.00 0.00 3.69
703 1861 1.982395 AGACCGCCCTGTTGATCGA 60.982 57.895 0.00 0.00 0.00 3.59
704 1862 1.144057 GACCGCCCTGTTGATCGAT 59.856 57.895 0.00 0.00 0.00 3.59
705 1863 0.387929 GACCGCCCTGTTGATCGATA 59.612 55.000 0.00 0.00 0.00 2.92
706 1864 0.104304 ACCGCCCTGTTGATCGATAC 59.896 55.000 0.00 0.00 0.00 2.24
707 1865 0.104120 CCGCCCTGTTGATCGATACA 59.896 55.000 0.00 0.00 0.00 2.29
708 1866 1.472552 CCGCCCTGTTGATCGATACAA 60.473 52.381 0.00 1.93 0.00 2.41
729 1887 4.864916 AATCGATGTTGGATGACTTTCG 57.135 40.909 0.00 0.00 0.00 3.46
731 1889 2.993220 TCGATGTTGGATGACTTTCGTG 59.007 45.455 0.00 0.00 32.02 4.35
732 1890 2.736721 CGATGTTGGATGACTTTCGTGT 59.263 45.455 0.00 0.00 0.00 4.49
733 1891 3.924073 CGATGTTGGATGACTTTCGTGTA 59.076 43.478 0.00 0.00 0.00 2.90
735 1893 5.063438 CGATGTTGGATGACTTTCGTGTATT 59.937 40.000 0.00 0.00 0.00 1.89
736 1894 5.605564 TGTTGGATGACTTTCGTGTATTG 57.394 39.130 0.00 0.00 0.00 1.90
737 1895 5.301555 TGTTGGATGACTTTCGTGTATTGA 58.698 37.500 0.00 0.00 0.00 2.57
739 1897 6.429692 TGTTGGATGACTTTCGTGTATTGAAT 59.570 34.615 0.00 0.00 0.00 2.57
740 1898 6.421377 TGGATGACTTTCGTGTATTGAATG 57.579 37.500 0.00 0.00 0.00 2.67
748 1906 1.735018 CGTGTATTGAATGGTTGCGGA 59.265 47.619 0.00 0.00 0.00 5.54
751 1909 3.438781 GTGTATTGAATGGTTGCGGAAGA 59.561 43.478 0.00 0.00 0.00 2.87
756 1914 2.262211 GAATGGTTGCGGAAGATTTGC 58.738 47.619 0.00 0.00 0.00 3.68
769 1927 1.623081 GATTTGCGAGTCGGCGTTGA 61.623 55.000 15.52 0.00 35.06 3.18
777 1935 1.132640 GTCGGCGTTGAAGATGCAC 59.867 57.895 6.85 0.00 42.27 4.57
779 1937 1.014044 TCGGCGTTGAAGATGCACTC 61.014 55.000 6.85 0.00 42.27 3.51
789 1947 6.310197 GTTGAAGATGCACTCATAAACTGTC 58.690 40.000 0.00 0.00 31.96 3.51
980 2139 2.203998 CCACCACTCCACTCCCCT 60.204 66.667 0.00 0.00 0.00 4.79
982 2141 2.122954 ACCACTCCACTCCCCTCC 59.877 66.667 0.00 0.00 0.00 4.30
983 2142 2.689034 CCACTCCACTCCCCTCCC 60.689 72.222 0.00 0.00 0.00 4.30
1411 3721 2.954989 CGACCCTTCCTAGTAGGTAACC 59.045 54.545 16.02 1.91 36.53 2.85
1412 3722 3.625716 CGACCCTTCCTAGTAGGTAACCA 60.626 52.174 16.02 0.00 36.53 3.67
1413 3723 3.703556 GACCCTTCCTAGTAGGTAACCAC 59.296 52.174 16.02 2.44 36.53 4.16
1414 3724 3.339130 ACCCTTCCTAGTAGGTAACCACT 59.661 47.826 16.02 0.00 36.53 4.00
1415 3725 3.959449 CCCTTCCTAGTAGGTAACCACTC 59.041 52.174 16.02 0.00 36.53 3.51
1491 3839 1.143620 GTGTTTTGCTTGCTGGGCA 59.856 52.632 0.00 0.00 37.97 5.36
1493 3841 1.329171 TGTTTTGCTTGCTGGGCAGT 61.329 50.000 0.00 0.00 40.61 4.40
1494 3842 0.673437 GTTTTGCTTGCTGGGCAGTA 59.327 50.000 0.00 0.00 40.61 2.74
1495 3843 0.673437 TTTTGCTTGCTGGGCAGTAC 59.327 50.000 0.00 0.00 40.61 2.73
1497 3845 0.690192 TTGCTTGCTGGGCAGTACTA 59.310 50.000 0.00 0.00 40.61 1.82
1509 4754 3.433598 GGGCAGTACTATTTGCTGGATCA 60.434 47.826 0.00 0.00 38.34 2.92
1510 4755 4.392940 GGCAGTACTATTTGCTGGATCAT 58.607 43.478 0.00 0.00 38.34 2.45
1546 4799 2.148916 ATGTGTCCGTGTGTGTACTG 57.851 50.000 0.00 0.00 0.00 2.74
1548 4801 1.299544 TGTCCGTGTGTGTACTGCG 60.300 57.895 0.00 0.00 0.00 5.18
1550 4803 0.040157 GTCCGTGTGTGTACTGCGTA 60.040 55.000 0.00 0.00 0.00 4.42
1551 4804 0.239082 TCCGTGTGTGTACTGCGTAG 59.761 55.000 0.00 0.00 0.00 3.51
1552 4805 0.039798 CCGTGTGTGTACTGCGTAGT 60.040 55.000 11.87 11.87 40.99 2.73
1553 4806 1.197492 CCGTGTGTGTACTGCGTAGTA 59.803 52.381 9.49 9.49 38.36 1.82
1595 4856 6.595716 CCGATTCCAACTCCCAAGATATTATC 59.404 42.308 0.00 0.00 0.00 1.75
1619 4880 5.245301 CACACGGAGGAACCTGGATTATATA 59.755 44.000 0.00 0.00 36.31 0.86
1620 4881 6.023603 ACACGGAGGAACCTGGATTATATAT 58.976 40.000 0.00 0.00 36.31 0.86
1664 4948 9.490379 GTATTATAGAAACATCCCAGGTAACAG 57.510 37.037 0.00 0.00 41.41 3.16
1668 4952 4.104102 AGAAACATCCCAGGTAACAGTTGA 59.896 41.667 0.00 0.00 41.41 3.18
1673 4957 2.039746 TCCCAGGTAACAGTTGATGGTG 59.960 50.000 10.65 4.88 41.41 4.17
1678 4962 5.335897 CCAGGTAACAGTTGATGGTGAAATG 60.336 44.000 0.00 0.00 41.41 2.32
1682 4966 6.430000 GGTAACAGTTGATGGTGAAATGTACT 59.570 38.462 0.00 0.00 30.76 2.73
1688 4972 4.780815 TGATGGTGAAATGTACTGGATCC 58.219 43.478 4.20 4.20 0.00 3.36
1689 4973 4.227073 TGATGGTGAAATGTACTGGATCCA 59.773 41.667 15.27 15.27 0.00 3.41
1703 5003 1.074926 ATCCAGGCGGTGATCCTCT 60.075 57.895 0.00 0.00 0.00 3.69
1704 5004 1.406065 ATCCAGGCGGTGATCCTCTG 61.406 60.000 0.00 0.00 34.69 3.35
1705 5005 2.202987 CAGGCGGTGATCCTCTGC 60.203 66.667 9.45 9.45 36.57 4.26
1706 5006 2.364842 AGGCGGTGATCCTCTGCT 60.365 61.111 15.21 3.27 37.35 4.24
1707 5007 2.107953 GGCGGTGATCCTCTGCTC 59.892 66.667 15.21 5.60 37.35 4.26
1708 5008 2.430610 GGCGGTGATCCTCTGCTCT 61.431 63.158 15.21 0.00 37.35 4.09
1711 5011 1.933247 CGGTGATCCTCTGCTCTTTC 58.067 55.000 0.00 0.00 0.00 2.62
1717 5017 3.449018 TGATCCTCTGCTCTTTCCTGTAC 59.551 47.826 0.00 0.00 0.00 2.90
1755 5060 4.321082 GGTGTCAGTAGGTGAAGTCAGTAC 60.321 50.000 0.00 0.00 36.74 2.73
1771 5076 4.508124 GTCAGTACCGATTGATGGATGAAC 59.492 45.833 0.00 0.00 0.00 3.18
1782 5104 4.598022 TGATGGATGAACAATGTAGGCAA 58.402 39.130 0.00 0.00 0.00 4.52
1798 5120 1.887320 GCAATACTGAACTTGCAGCG 58.113 50.000 2.60 0.00 45.50 5.18
1825 5153 1.067295 AGCAAGGGATGACACCAGAA 58.933 50.000 0.00 0.00 0.00 3.02
1826 5154 1.004044 AGCAAGGGATGACACCAGAAG 59.996 52.381 0.00 0.00 0.00 2.85
1832 5160 1.541588 GGATGACACCAGAAGCAAACC 59.458 52.381 0.00 0.00 0.00 3.27
1842 5170 2.476619 CAGAAGCAAACCGTCACTAGTG 59.523 50.000 17.17 17.17 0.00 2.74
1843 5171 2.364324 AGAAGCAAACCGTCACTAGTGA 59.636 45.455 21.74 21.74 37.24 3.41
1844 5172 2.440539 AGCAAACCGTCACTAGTGAG 57.559 50.000 25.81 17.08 40.75 3.51
1845 5173 1.687123 AGCAAACCGTCACTAGTGAGT 59.313 47.619 25.81 17.74 40.75 3.41
1846 5174 2.102588 AGCAAACCGTCACTAGTGAGTT 59.897 45.455 25.81 22.15 40.75 3.01
1847 5175 2.221055 GCAAACCGTCACTAGTGAGTTG 59.779 50.000 25.81 23.63 40.75 3.16
1848 5176 3.713288 CAAACCGTCACTAGTGAGTTGA 58.287 45.455 25.81 0.98 40.75 3.18
1849 5177 3.644884 AACCGTCACTAGTGAGTTGAG 57.355 47.619 25.81 14.32 40.75 3.02
1850 5178 2.860009 ACCGTCACTAGTGAGTTGAGA 58.140 47.619 25.81 0.00 40.75 3.27
1851 5179 2.814919 ACCGTCACTAGTGAGTTGAGAG 59.185 50.000 25.81 11.43 40.75 3.20
1852 5180 2.814919 CCGTCACTAGTGAGTTGAGAGT 59.185 50.000 25.81 0.00 40.75 3.24
1853 5181 3.253677 CCGTCACTAGTGAGTTGAGAGTT 59.746 47.826 25.81 0.00 40.75 3.01
1854 5182 4.261656 CCGTCACTAGTGAGTTGAGAGTTT 60.262 45.833 25.81 0.00 40.75 2.66
1855 5183 4.912766 CGTCACTAGTGAGTTGAGAGTTTC 59.087 45.833 25.81 8.53 40.75 2.78
1856 5184 5.505819 CGTCACTAGTGAGTTGAGAGTTTCA 60.506 44.000 25.81 0.00 40.75 2.69
1857 5185 5.918011 GTCACTAGTGAGTTGAGAGTTTCAG 59.082 44.000 25.81 0.00 40.75 3.02
1858 5186 5.828328 TCACTAGTGAGTTGAGAGTTTCAGA 59.172 40.000 21.74 0.00 34.09 3.27
1859 5187 6.016693 TCACTAGTGAGTTGAGAGTTTCAGAG 60.017 42.308 21.74 0.00 34.09 3.35
1860 5188 5.830991 ACTAGTGAGTTGAGAGTTTCAGAGT 59.169 40.000 0.00 0.00 37.07 3.24
1861 5189 5.606348 AGTGAGTTGAGAGTTTCAGAGTT 57.394 39.130 0.00 0.00 37.07 3.01
1862 5190 5.983540 AGTGAGTTGAGAGTTTCAGAGTTT 58.016 37.500 0.00 0.00 37.07 2.66
1863 5191 6.045955 AGTGAGTTGAGAGTTTCAGAGTTTC 58.954 40.000 0.00 0.00 37.07 2.78
1864 5192 6.045955 GTGAGTTGAGAGTTTCAGAGTTTCT 58.954 40.000 0.00 0.00 37.07 2.52
1865 5193 6.536941 GTGAGTTGAGAGTTTCAGAGTTTCTT 59.463 38.462 0.00 0.00 37.07 2.52
1866 5194 7.707035 GTGAGTTGAGAGTTTCAGAGTTTCTTA 59.293 37.037 0.00 0.00 37.07 2.10
1867 5195 8.424918 TGAGTTGAGAGTTTCAGAGTTTCTTAT 58.575 33.333 0.00 0.00 37.07 1.73
1868 5196 8.600449 AGTTGAGAGTTTCAGAGTTTCTTATG 57.400 34.615 0.00 0.00 37.07 1.90
1869 5197 7.172361 AGTTGAGAGTTTCAGAGTTTCTTATGC 59.828 37.037 0.00 0.00 37.07 3.14
1870 5198 6.763355 TGAGAGTTTCAGAGTTTCTTATGCT 58.237 36.000 0.00 0.00 0.00 3.79
1871 5199 7.896811 TGAGAGTTTCAGAGTTTCTTATGCTA 58.103 34.615 0.00 0.00 0.00 3.49
1872 5200 8.031864 TGAGAGTTTCAGAGTTTCTTATGCTAG 58.968 37.037 0.00 0.00 0.00 3.42
1873 5201 6.816140 AGAGTTTCAGAGTTTCTTATGCTAGC 59.184 38.462 8.10 8.10 0.00 3.42
1874 5202 6.467677 AGTTTCAGAGTTTCTTATGCTAGCA 58.532 36.000 21.85 21.85 0.00 3.49
1875 5203 6.593382 AGTTTCAGAGTTTCTTATGCTAGCAG 59.407 38.462 23.89 9.89 0.00 4.24
1876 5204 5.667539 TCAGAGTTTCTTATGCTAGCAGT 57.332 39.130 23.89 13.40 0.00 4.40
1877 5205 6.042638 TCAGAGTTTCTTATGCTAGCAGTT 57.957 37.500 23.89 9.94 0.00 3.16
1878 5206 6.467677 TCAGAGTTTCTTATGCTAGCAGTTT 58.532 36.000 23.89 9.14 0.00 2.66
1879 5207 6.591834 TCAGAGTTTCTTATGCTAGCAGTTTC 59.408 38.462 23.89 11.12 0.00 2.78
1880 5208 5.877564 AGAGTTTCTTATGCTAGCAGTTTCC 59.122 40.000 23.89 7.44 0.00 3.13
1881 5209 4.944317 AGTTTCTTATGCTAGCAGTTTCCC 59.056 41.667 23.89 8.06 0.00 3.97
1882 5210 4.568072 TTCTTATGCTAGCAGTTTCCCA 57.432 40.909 23.89 0.67 0.00 4.37
1883 5211 4.142609 TCTTATGCTAGCAGTTTCCCAG 57.857 45.455 23.89 10.23 0.00 4.45
1904 5232 5.505286 CAGTTCGTTGCTGGATTATGAATC 58.495 41.667 0.00 0.00 37.17 2.52
1930 5258 8.358148 CAATGCCTAGATAATGAGCTGAATTTT 58.642 33.333 0.00 0.00 0.00 1.82
1936 5264 5.533903 AGATAATGAGCTGAATTTTGGCGAT 59.466 36.000 0.00 0.00 0.00 4.58
1939 5267 2.162208 TGAGCTGAATTTTGGCGATGAC 59.838 45.455 0.00 0.00 0.00 3.06
1944 5272 4.518217 CTGAATTTTGGCGATGACGATAC 58.482 43.478 0.00 0.00 42.66 2.24
1958 5286 0.248907 CGATACCGTTGTCGCTCCAT 60.249 55.000 0.00 0.00 35.54 3.41
1962 5290 1.736645 CCGTTGTCGCTCCATTCGT 60.737 57.895 0.00 0.00 35.54 3.85
1985 5362 5.180117 GTGTAATGAGCTGTTGTGTCTGATT 59.820 40.000 0.00 0.00 0.00 2.57
1990 5367 4.252073 GAGCTGTTGTGTCTGATTGAGAT 58.748 43.478 0.00 0.00 31.63 2.75
1999 5376 3.055312 TGTCTGATTGAGATTCTGCTGCT 60.055 43.478 0.00 0.00 31.63 4.24
2022 5399 0.874390 TTTCATCAGTTGTCGGCAGC 59.126 50.000 0.00 0.00 0.00 5.25
2101 5489 1.469767 GGCTGCTTTATCCTTTTGCCG 60.470 52.381 0.00 0.00 0.00 5.69
2139 5527 5.118990 TCTGAACATTCATAACTGCTAGGC 58.881 41.667 0.00 0.00 36.46 3.93
2157 5549 1.933853 GGCGACTGGTAGCTACATTTG 59.066 52.381 24.75 12.60 0.00 2.32
2181 5573 2.484264 ACGTGACTGCTTTATCCTTTGC 59.516 45.455 0.00 0.00 0.00 3.68
2185 5577 0.740737 CTGCTTTATCCTTTGCCCCG 59.259 55.000 0.00 0.00 0.00 5.73
2186 5578 0.682855 TGCTTTATCCTTTGCCCCGG 60.683 55.000 0.00 0.00 0.00 5.73
2189 5581 0.996583 TTTATCCTTTGCCCCGGAGT 59.003 50.000 0.73 0.00 31.82 3.85
2208 5600 5.305585 GGAGTACTGAAACACAAGATGGAA 58.694 41.667 0.00 0.00 0.00 3.53
2209 5601 5.940470 GGAGTACTGAAACACAAGATGGAAT 59.060 40.000 0.00 0.00 0.00 3.01
2210 5602 6.128172 GGAGTACTGAAACACAAGATGGAATG 60.128 42.308 0.00 0.00 0.00 2.67
2211 5603 6.299141 AGTACTGAAACACAAGATGGAATGT 58.701 36.000 0.00 0.00 0.00 2.71
2217 5609 3.581024 CACAAGATGGAATGTGGGTTG 57.419 47.619 0.00 0.00 42.46 3.77
2218 5610 2.231964 CACAAGATGGAATGTGGGTTGG 59.768 50.000 0.00 0.00 42.46 3.77
2219 5611 1.205417 CAAGATGGAATGTGGGTTGGC 59.795 52.381 0.00 0.00 0.00 4.52
2220 5612 0.680921 AGATGGAATGTGGGTTGGCG 60.681 55.000 0.00 0.00 0.00 5.69
2221 5613 0.679640 GATGGAATGTGGGTTGGCGA 60.680 55.000 0.00 0.00 0.00 5.54
2222 5614 0.251564 ATGGAATGTGGGTTGGCGAA 60.252 50.000 0.00 0.00 0.00 4.70
2223 5615 1.175983 TGGAATGTGGGTTGGCGAAC 61.176 55.000 2.51 2.51 0.00 3.95
2224 5616 0.893727 GGAATGTGGGTTGGCGAACT 60.894 55.000 11.57 0.00 32.15 3.01
2225 5617 0.958822 GAATGTGGGTTGGCGAACTT 59.041 50.000 11.57 0.00 32.15 2.66
2226 5618 1.339929 GAATGTGGGTTGGCGAACTTT 59.660 47.619 11.57 0.00 32.15 2.66
2227 5619 0.673437 ATGTGGGTTGGCGAACTTTG 59.327 50.000 11.57 0.00 32.15 2.77
2228 5620 1.362355 GTGGGTTGGCGAACTTTGG 59.638 57.895 11.57 0.00 32.15 3.28
2229 5621 1.076632 TGGGTTGGCGAACTTTGGT 60.077 52.632 11.57 0.00 32.15 3.67
2230 5622 0.183014 TGGGTTGGCGAACTTTGGTA 59.817 50.000 11.57 0.00 32.15 3.25
2231 5623 1.320507 GGGTTGGCGAACTTTGGTAA 58.679 50.000 11.57 0.00 32.15 2.85
2232 5624 1.682323 GGGTTGGCGAACTTTGGTAAA 59.318 47.619 11.57 0.00 32.15 2.01
2233 5625 2.297880 GGGTTGGCGAACTTTGGTAAAT 59.702 45.455 11.57 0.00 32.15 1.40
2234 5626 3.313690 GGTTGGCGAACTTTGGTAAATG 58.686 45.455 11.57 0.00 32.15 2.32
2235 5627 3.243602 GGTTGGCGAACTTTGGTAAATGT 60.244 43.478 11.57 0.00 32.15 2.71
2236 5628 4.023021 GGTTGGCGAACTTTGGTAAATGTA 60.023 41.667 11.57 0.00 32.15 2.29
2237 5629 5.507650 GGTTGGCGAACTTTGGTAAATGTAA 60.508 40.000 11.57 0.00 32.15 2.41
2238 5630 5.769484 TGGCGAACTTTGGTAAATGTAAA 57.231 34.783 0.00 0.00 0.00 2.01
2239 5631 6.145338 TGGCGAACTTTGGTAAATGTAAAA 57.855 33.333 0.00 0.00 0.00 1.52
2240 5632 6.210078 TGGCGAACTTTGGTAAATGTAAAAG 58.790 36.000 0.00 0.00 36.06 2.27
2241 5633 6.039493 TGGCGAACTTTGGTAAATGTAAAAGA 59.961 34.615 0.00 0.00 34.47 2.52
2242 5634 6.361481 GGCGAACTTTGGTAAATGTAAAAGAC 59.639 38.462 0.00 0.00 34.47 3.01
2243 5635 6.913673 GCGAACTTTGGTAAATGTAAAAGACA 59.086 34.615 0.00 0.00 43.97 3.41
2244 5636 7.432838 GCGAACTTTGGTAAATGTAAAAGACAA 59.567 33.333 0.00 0.00 42.78 3.18
2245 5637 8.953990 CGAACTTTGGTAAATGTAAAAGACAAG 58.046 33.333 0.00 0.00 42.78 3.16
2246 5638 8.642908 AACTTTGGTAAATGTAAAAGACAAGC 57.357 30.769 0.00 0.00 42.78 4.01
2247 5639 8.007405 ACTTTGGTAAATGTAAAAGACAAGCT 57.993 30.769 0.00 0.00 42.78 3.74
2248 5640 7.920682 ACTTTGGTAAATGTAAAAGACAAGCTG 59.079 33.333 0.00 0.00 42.78 4.24
2249 5641 6.952773 TGGTAAATGTAAAAGACAAGCTGT 57.047 33.333 0.00 0.00 42.78 4.40
2250 5642 7.341445 TGGTAAATGTAAAAGACAAGCTGTT 57.659 32.000 0.00 0.00 42.78 3.16
2251 5643 7.199766 TGGTAAATGTAAAAGACAAGCTGTTG 58.800 34.615 0.00 0.00 42.78 3.33
2252 5644 6.640907 GGTAAATGTAAAAGACAAGCTGTTGG 59.359 38.462 0.00 0.00 42.78 3.77
2253 5645 3.708563 TGTAAAAGACAAGCTGTTGGC 57.291 42.857 0.00 0.00 42.82 4.52
2262 5654 2.125106 GCTGTTGGCTAGGGTCGG 60.125 66.667 0.00 0.00 38.06 4.79
2263 5655 2.584608 CTGTTGGCTAGGGTCGGG 59.415 66.667 0.00 0.00 0.00 5.14
2264 5656 1.987855 CTGTTGGCTAGGGTCGGGA 60.988 63.158 0.00 0.00 0.00 5.14
2265 5657 2.240162 CTGTTGGCTAGGGTCGGGAC 62.240 65.000 0.00 0.00 0.00 4.46
2284 5676 1.442769 CCTGATGAGGTGGTCAAACG 58.557 55.000 0.00 0.00 39.19 3.60
2286 5678 2.355108 CCTGATGAGGTGGTCAAACGAT 60.355 50.000 0.00 0.00 39.19 3.73
2289 5681 2.163818 TGAGGTGGTCAAACGATGTC 57.836 50.000 0.00 0.00 29.64 3.06
2290 5682 1.414550 TGAGGTGGTCAAACGATGTCA 59.585 47.619 0.00 0.00 29.64 3.58
2293 5685 1.135689 GGTGGTCAAACGATGTCATGC 60.136 52.381 0.00 0.00 0.00 4.06
2295 5687 1.805943 TGGTCAAACGATGTCATGCTG 59.194 47.619 0.00 0.00 0.00 4.41
2300 5692 1.366679 AACGATGTCATGCTGAGCTG 58.633 50.000 5.83 1.57 0.00 4.24
2306 5698 1.337541 TGTCATGCTGAGCTGAGTGTC 60.338 52.381 5.83 0.00 0.00 3.67
2308 5700 1.077123 CATGCTGAGCTGAGTGTCAC 58.923 55.000 5.83 0.00 0.00 3.67
2310 5702 1.375268 GCTGAGCTGAGTGTCACCC 60.375 63.158 1.09 0.00 0.00 4.61
2312 5704 0.037512 CTGAGCTGAGTGTCACCCTG 60.038 60.000 0.00 0.00 0.00 4.45
2314 5706 0.901124 GAGCTGAGTGTCACCCTGAT 59.099 55.000 0.00 0.00 0.00 2.90
2315 5707 2.103373 GAGCTGAGTGTCACCCTGATA 58.897 52.381 0.00 0.00 0.00 2.15
2317 5709 3.110705 AGCTGAGTGTCACCCTGATATT 58.889 45.455 0.00 0.00 0.00 1.28
2318 5710 3.521126 AGCTGAGTGTCACCCTGATATTT 59.479 43.478 0.00 0.00 0.00 1.40
2320 5712 4.194640 CTGAGTGTCACCCTGATATTTGG 58.805 47.826 0.00 0.00 0.00 3.28
2321 5713 3.843619 TGAGTGTCACCCTGATATTTGGA 59.156 43.478 0.00 0.00 0.00 3.53
2322 5714 4.192317 GAGTGTCACCCTGATATTTGGAC 58.808 47.826 0.00 0.00 0.00 4.02
2323 5715 3.587061 AGTGTCACCCTGATATTTGGACA 59.413 43.478 0.00 0.00 0.00 4.02
2324 5716 3.941483 GTGTCACCCTGATATTTGGACAG 59.059 47.826 0.00 0.00 34.81 3.51
2327 5719 3.843619 TCACCCTGATATTTGGACAGTGA 59.156 43.478 0.00 0.00 0.00 3.41
2328 5720 4.080919 TCACCCTGATATTTGGACAGTGAG 60.081 45.833 0.00 0.00 0.00 3.51
2329 5721 3.846588 ACCCTGATATTTGGACAGTGAGT 59.153 43.478 0.00 0.00 0.00 3.41
2330 5722 4.080863 ACCCTGATATTTGGACAGTGAGTC 60.081 45.833 0.00 0.00 46.83 3.36
2341 5733 4.717233 GACAGTGAGTCAGTGATCATCT 57.283 45.455 30.34 10.21 46.77 2.90
2342 5734 5.826601 GACAGTGAGTCAGTGATCATCTA 57.173 43.478 30.34 0.00 46.77 1.98
2343 5735 5.820131 GACAGTGAGTCAGTGATCATCTAG 58.180 45.833 30.34 4.96 46.77 2.43
2344 5736 5.504853 ACAGTGAGTCAGTGATCATCTAGA 58.495 41.667 30.34 0.00 38.11 2.43
2345 5737 6.128486 ACAGTGAGTCAGTGATCATCTAGAT 58.872 40.000 30.34 0.00 38.11 1.98
2389 5781 9.850628 TCTAAATGATCTTGAATTTCTTTGCAG 57.149 29.630 0.00 0.00 0.00 4.41
2390 5782 9.850628 CTAAATGATCTTGAATTTCTTTGCAGA 57.149 29.630 0.00 0.00 0.00 4.26
2392 5784 8.703604 AATGATCTTGAATTTCTTTGCAGATG 57.296 30.769 0.00 0.00 0.00 2.90
2393 5785 6.627243 TGATCTTGAATTTCTTTGCAGATGG 58.373 36.000 0.00 0.00 0.00 3.51
2394 5786 6.434965 TGATCTTGAATTTCTTTGCAGATGGA 59.565 34.615 0.00 0.00 0.00 3.41
2395 5787 6.263516 TCTTGAATTTCTTTGCAGATGGAG 57.736 37.500 0.00 0.00 0.00 3.86
2396 5788 5.771666 TCTTGAATTTCTTTGCAGATGGAGT 59.228 36.000 0.00 0.00 0.00 3.85
2397 5789 6.942005 TCTTGAATTTCTTTGCAGATGGAGTA 59.058 34.615 0.00 0.00 0.00 2.59
2398 5790 6.500684 TGAATTTCTTTGCAGATGGAGTAC 57.499 37.500 0.00 0.00 0.00 2.73
2399 5791 6.003326 TGAATTTCTTTGCAGATGGAGTACA 58.997 36.000 0.00 0.00 0.00 2.90
2400 5792 6.489700 TGAATTTCTTTGCAGATGGAGTACAA 59.510 34.615 0.00 0.00 0.00 2.41
2401 5793 6.899393 ATTTCTTTGCAGATGGAGTACAAA 57.101 33.333 0.00 0.00 0.00 2.83
2402 5794 6.899393 TTTCTTTGCAGATGGAGTACAAAT 57.101 33.333 0.00 0.00 30.52 2.32
2403 5795 6.899393 TTCTTTGCAGATGGAGTACAAATT 57.101 33.333 0.00 0.00 30.52 1.82
2404 5796 7.994425 TTCTTTGCAGATGGAGTACAAATTA 57.006 32.000 0.00 0.00 30.52 1.40
2405 5797 8.579850 TTCTTTGCAGATGGAGTACAAATTAT 57.420 30.769 0.00 0.00 30.52 1.28
2406 5798 8.213518 TCTTTGCAGATGGAGTACAAATTATC 57.786 34.615 0.00 0.00 30.52 1.75
2407 5799 8.049117 TCTTTGCAGATGGAGTACAAATTATCT 58.951 33.333 0.00 0.00 30.52 1.98
2408 5800 7.792374 TTGCAGATGGAGTACAAATTATCTC 57.208 36.000 0.00 0.00 0.00 2.75
2409 5801 6.291377 TGCAGATGGAGTACAAATTATCTCC 58.709 40.000 0.00 0.00 44.54 3.71
2410 5802 6.100279 TGCAGATGGAGTACAAATTATCTCCT 59.900 38.462 10.66 0.00 44.57 3.69
2411 5803 6.995091 GCAGATGGAGTACAAATTATCTCCTT 59.005 38.462 10.66 5.19 44.57 3.36
2412 5804 7.041508 GCAGATGGAGTACAAATTATCTCCTTG 60.042 40.741 10.66 7.94 44.57 3.61
2413 5805 6.995091 AGATGGAGTACAAATTATCTCCTTGC 59.005 38.462 10.66 2.00 44.57 4.01
2414 5806 6.061022 TGGAGTACAAATTATCTCCTTGCA 57.939 37.500 10.66 0.00 44.57 4.08
2415 5807 6.480763 TGGAGTACAAATTATCTCCTTGCAA 58.519 36.000 0.00 0.00 44.57 4.08
2416 5808 6.945435 TGGAGTACAAATTATCTCCTTGCAAA 59.055 34.615 0.00 0.00 44.57 3.68
2417 5809 7.450014 TGGAGTACAAATTATCTCCTTGCAAAA 59.550 33.333 0.00 0.00 44.57 2.44
2418 5810 8.303876 GGAGTACAAATTATCTCCTTGCAAAAA 58.696 33.333 0.00 0.00 42.02 1.94
2453 5845 7.713764 TTTTGCTTCAAAGGATTTCTAAAGC 57.286 32.000 0.00 0.00 35.03 3.51
2454 5846 6.403866 TTGCTTCAAAGGATTTCTAAAGCA 57.596 33.333 2.99 2.99 35.03 3.91
2455 5847 6.403866 TGCTTCAAAGGATTTCTAAAGCAA 57.596 33.333 4.55 0.00 35.03 3.91
2456 5848 6.449698 TGCTTCAAAGGATTTCTAAAGCAAG 58.550 36.000 4.55 0.00 35.03 4.01
2457 5849 6.040842 TGCTTCAAAGGATTTCTAAAGCAAGT 59.959 34.615 4.55 0.00 35.03 3.16
2458 5850 6.584184 GCTTCAAAGGATTTCTAAAGCAAGTC 59.416 38.462 0.00 0.00 35.03 3.01
2459 5851 7.522889 GCTTCAAAGGATTTCTAAAGCAAGTCT 60.523 37.037 0.00 0.00 35.03 3.24
2460 5852 7.440523 TCAAAGGATTTCTAAAGCAAGTCTC 57.559 36.000 0.00 0.00 35.03 3.36
2461 5853 6.147821 TCAAAGGATTTCTAAAGCAAGTCTCG 59.852 38.462 0.00 0.00 35.03 4.04
2462 5854 4.508662 AGGATTTCTAAAGCAAGTCTCGG 58.491 43.478 0.00 0.00 0.00 4.63
2463 5855 4.223032 AGGATTTCTAAAGCAAGTCTCGGA 59.777 41.667 0.00 0.00 0.00 4.55
2464 5856 4.568760 GGATTTCTAAAGCAAGTCTCGGAG 59.431 45.833 0.00 0.00 0.00 4.63
2465 5857 3.594603 TTCTAAAGCAAGTCTCGGAGG 57.405 47.619 4.96 0.00 0.00 4.30
2466 5858 2.803956 TCTAAAGCAAGTCTCGGAGGA 58.196 47.619 4.96 0.00 0.00 3.71
2467 5859 3.366396 TCTAAAGCAAGTCTCGGAGGAT 58.634 45.455 4.96 0.00 0.00 3.24
2468 5860 3.769844 TCTAAAGCAAGTCTCGGAGGATT 59.230 43.478 4.96 0.00 0.00 3.01
2469 5861 2.682155 AAGCAAGTCTCGGAGGATTC 57.318 50.000 4.96 0.00 0.00 2.52
2470 5862 0.827368 AGCAAGTCTCGGAGGATTCC 59.173 55.000 4.96 0.00 40.33 3.01
2490 5882 7.948278 ATTCCGATCCTTAGAATTTCTTACG 57.052 36.000 3.86 2.84 0.00 3.18
2491 5883 6.461110 TCCGATCCTTAGAATTTCTTACGT 57.539 37.500 3.86 0.00 0.00 3.57
2492 5884 7.572523 TCCGATCCTTAGAATTTCTTACGTA 57.427 36.000 3.86 0.00 0.00 3.57
2493 5885 7.420800 TCCGATCCTTAGAATTTCTTACGTAC 58.579 38.462 3.86 0.00 0.00 3.67
2494 5886 6.359087 CCGATCCTTAGAATTTCTTACGTACG 59.641 42.308 15.01 15.01 0.00 3.67
2495 5887 6.909357 CGATCCTTAGAATTTCTTACGTACGT 59.091 38.462 25.98 25.98 0.00 3.57
2496 5888 7.097128 CGATCCTTAGAATTTCTTACGTACGTG 60.097 40.741 30.25 15.05 0.00 4.49
2497 5889 7.144722 TCCTTAGAATTTCTTACGTACGTGA 57.855 36.000 30.25 21.54 0.00 4.35
2498 5890 7.246311 TCCTTAGAATTTCTTACGTACGTGAG 58.754 38.462 28.61 28.61 33.68 3.51
2500 5892 7.540055 CCTTAGAATTTCTTACGTACGTGAGTT 59.460 37.037 31.42 21.97 46.40 3.01
2501 5893 6.686130 AGAATTTCTTACGTACGTGAGTTG 57.314 37.500 31.42 14.18 46.40 3.16
2502 5894 6.211515 AGAATTTCTTACGTACGTGAGTTGT 58.788 36.000 31.42 18.65 46.40 3.32
2503 5895 6.698766 AGAATTTCTTACGTACGTGAGTTGTT 59.301 34.615 31.42 24.20 46.40 2.83
2504 5896 6.833342 ATTTCTTACGTACGTGAGTTGTTT 57.167 33.333 31.42 15.43 46.40 2.83
2505 5897 5.624715 TTCTTACGTACGTGAGTTGTTTG 57.375 39.130 31.42 12.26 46.40 2.93
2506 5898 4.043750 TCTTACGTACGTGAGTTGTTTGG 58.956 43.478 31.42 11.62 46.40 3.28
2507 5899 2.298411 ACGTACGTGAGTTGTTTGGT 57.702 45.000 22.14 0.00 46.40 3.67
2508 5900 2.620242 ACGTACGTGAGTTGTTTGGTT 58.380 42.857 22.14 0.00 46.40 3.67
2509 5901 2.604462 ACGTACGTGAGTTGTTTGGTTC 59.396 45.455 22.14 0.00 46.40 3.62
2510 5902 2.346924 CGTACGTGAGTTGTTTGGTTCG 60.347 50.000 7.22 0.00 46.40 3.95
2511 5903 1.729284 ACGTGAGTTGTTTGGTTCGT 58.271 45.000 0.00 0.00 46.40 3.85
2512 5904 2.891112 ACGTGAGTTGTTTGGTTCGTA 58.109 42.857 0.00 0.00 46.40 3.43
2513 5905 2.861935 ACGTGAGTTGTTTGGTTCGTAG 59.138 45.455 0.00 0.00 46.40 3.51
2514 5906 2.220133 CGTGAGTTGTTTGGTTCGTAGG 59.780 50.000 0.00 0.00 0.00 3.18
2515 5907 3.460103 GTGAGTTGTTTGGTTCGTAGGA 58.540 45.455 0.00 0.00 0.00 2.94
2516 5908 4.062991 GTGAGTTGTTTGGTTCGTAGGAT 58.937 43.478 0.00 0.00 0.00 3.24
2517 5909 4.514066 GTGAGTTGTTTGGTTCGTAGGATT 59.486 41.667 0.00 0.00 0.00 3.01
2518 5910 5.008316 GTGAGTTGTTTGGTTCGTAGGATTT 59.992 40.000 0.00 0.00 0.00 2.17
2519 5911 5.237779 TGAGTTGTTTGGTTCGTAGGATTTC 59.762 40.000 0.00 0.00 0.00 2.17
2520 5912 5.127491 AGTTGTTTGGTTCGTAGGATTTCA 58.873 37.500 0.00 0.00 0.00 2.69
2521 5913 5.591067 AGTTGTTTGGTTCGTAGGATTTCAA 59.409 36.000 0.00 0.00 0.00 2.69
2522 5914 6.095720 AGTTGTTTGGTTCGTAGGATTTCAAA 59.904 34.615 0.00 0.00 0.00 2.69
2523 5915 6.452494 TGTTTGGTTCGTAGGATTTCAAAA 57.548 33.333 8.73 0.00 0.00 2.44
2524 5916 6.864342 TGTTTGGTTCGTAGGATTTCAAAAA 58.136 32.000 8.73 3.69 0.00 1.94
2525 5917 7.493367 TGTTTGGTTCGTAGGATTTCAAAAAT 58.507 30.769 8.73 0.00 0.00 1.82
2526 5918 7.436673 TGTTTGGTTCGTAGGATTTCAAAAATG 59.563 33.333 8.73 0.00 0.00 2.32
2527 5919 5.465935 TGGTTCGTAGGATTTCAAAAATGC 58.534 37.500 0.00 0.00 0.00 3.56
2528 5920 5.010112 TGGTTCGTAGGATTTCAAAAATGCA 59.990 36.000 6.68 0.00 0.00 3.96
2529 5921 6.099341 GGTTCGTAGGATTTCAAAAATGCAT 58.901 36.000 0.00 0.00 0.00 3.96
2530 5922 7.094162 TGGTTCGTAGGATTTCAAAAATGCATA 60.094 33.333 0.00 0.00 0.00 3.14
2531 5923 7.920682 GGTTCGTAGGATTTCAAAAATGCATAT 59.079 33.333 0.00 0.00 0.00 1.78
2532 5924 8.745837 GTTCGTAGGATTTCAAAAATGCATATG 58.254 33.333 0.00 0.00 0.00 1.78
2533 5925 8.219546 TCGTAGGATTTCAAAAATGCATATGA 57.780 30.769 6.97 2.41 0.00 2.15
2534 5926 8.681806 TCGTAGGATTTCAAAAATGCATATGAA 58.318 29.630 6.97 14.87 0.00 2.57
2535 5927 8.745837 CGTAGGATTTCAAAAATGCATATGAAC 58.254 33.333 17.28 10.10 31.96 3.18
2536 5928 9.807649 GTAGGATTTCAAAAATGCATATGAACT 57.192 29.630 17.28 13.80 31.96 3.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 2.583441 CCTGCAGGTCCACGGAGAA 61.583 63.158 25.53 0.00 0.00 2.87
44 45 1.409064 TGCGGAGGTGTATCATGAGAC 59.591 52.381 13.60 13.60 0.00 3.36
55 56 1.000274 TCGATGATGTATGCGGAGGTG 60.000 52.381 0.00 0.00 0.00 4.00
77 78 6.655003 TGAGATGAAACTGAAAGACATAACCC 59.345 38.462 0.00 0.00 37.43 4.11
120 121 4.824479 TGCCTCAATCATCTGTCAAGTA 57.176 40.909 0.00 0.00 0.00 2.24
121 122 3.708403 TGCCTCAATCATCTGTCAAGT 57.292 42.857 0.00 0.00 0.00 3.16
130 131 2.490903 GCACAGACTTTGCCTCAATCAT 59.509 45.455 1.94 0.00 33.58 2.45
151 152 6.690530 TCCTTTTTATGTTCATTGCCTCAAG 58.309 36.000 0.00 0.00 0.00 3.02
164 165 6.375455 CAGTAACAGCTCCATCCTTTTTATGT 59.625 38.462 0.00 0.00 0.00 2.29
207 1260 2.288152 TGAATTTTGCGAAGGAAGGTGC 60.288 45.455 0.00 0.00 40.30 5.01
208 1261 3.641437 TGAATTTTGCGAAGGAAGGTG 57.359 42.857 0.00 0.00 40.30 4.00
209 1262 4.280677 TGATTGAATTTTGCGAAGGAAGGT 59.719 37.500 0.00 0.00 40.30 3.50
210 1263 4.808558 TGATTGAATTTTGCGAAGGAAGG 58.191 39.130 0.00 0.00 40.30 3.46
223 1276 4.889409 AGGGTGCGTTATGATGATTGAATT 59.111 37.500 0.00 0.00 0.00 2.17
237 1290 0.889186 GTGAACATGGAGGGTGCGTT 60.889 55.000 0.00 0.00 0.00 4.84
264 1317 2.181777 GATGAGGTCAGTCGCGCA 59.818 61.111 8.75 0.00 0.00 6.09
335 1388 6.710744 AGAACTGGTTTAACACATTGACCTAG 59.289 38.462 0.00 0.00 0.00 3.02
353 1406 6.477033 CGATGGATACTAAAAGTGAGAACTGG 59.523 42.308 0.00 0.00 37.61 4.00
386 1439 2.016318 TGACCGCTGCCAAATTCTATG 58.984 47.619 0.00 0.00 0.00 2.23
387 1440 2.418368 TGACCGCTGCCAAATTCTAT 57.582 45.000 0.00 0.00 0.00 1.98
464 1517 0.107831 AACAGGTGCGGCAAACTCTA 59.892 50.000 3.23 0.00 0.00 2.43
487 1540 2.625790 TGTTGTCCCCAAATACAGCAAC 59.374 45.455 0.00 0.00 34.47 4.17
504 1557 5.867174 TCGACCACTTACTGATGTATTGTTG 59.133 40.000 0.00 0.00 0.00 3.33
506 1559 5.654603 TCGACCACTTACTGATGTATTGT 57.345 39.130 0.00 0.00 0.00 2.71
513 1566 2.354805 GCCCTTTCGACCACTTACTGAT 60.355 50.000 0.00 0.00 0.00 2.90
516 1569 1.349067 AGCCCTTTCGACCACTTACT 58.651 50.000 0.00 0.00 0.00 2.24
517 1570 2.028748 TGTAGCCCTTTCGACCACTTAC 60.029 50.000 0.00 0.00 0.00 2.34
518 1571 2.250031 TGTAGCCCTTTCGACCACTTA 58.750 47.619 0.00 0.00 0.00 2.24
519 1572 1.053424 TGTAGCCCTTTCGACCACTT 58.947 50.000 0.00 0.00 0.00 3.16
557 1715 3.131933 ACTGAGCTGATCACTACCATGTC 59.868 47.826 0.00 0.00 33.22 3.06
561 1719 2.529632 ACACTGAGCTGATCACTACCA 58.470 47.619 0.00 0.00 33.22 3.25
577 1735 9.855021 GCAAATGGTTTAGTTAATGATAACACT 57.145 29.630 2.01 0.00 43.20 3.55
578 1736 9.855021 AGCAAATGGTTTAGTTAATGATAACAC 57.145 29.630 2.01 0.00 43.20 3.32
579 1737 9.853555 CAGCAAATGGTTTAGTTAATGATAACA 57.146 29.630 2.01 0.00 43.20 2.41
580 1738 9.301153 CCAGCAAATGGTTTAGTTAATGATAAC 57.699 33.333 0.00 0.00 44.91 1.89
597 1755 2.235650 TCTCTCTCTCCACCAGCAAATG 59.764 50.000 0.00 0.00 0.00 2.32
598 1756 2.500910 CTCTCTCTCTCCACCAGCAAAT 59.499 50.000 0.00 0.00 0.00 2.32
599 1757 1.898472 CTCTCTCTCTCCACCAGCAAA 59.102 52.381 0.00 0.00 0.00 3.68
600 1758 1.554836 CTCTCTCTCTCCACCAGCAA 58.445 55.000 0.00 0.00 0.00 3.91
601 1759 0.324183 CCTCTCTCTCTCCACCAGCA 60.324 60.000 0.00 0.00 0.00 4.41
602 1760 0.324275 ACCTCTCTCTCTCCACCAGC 60.324 60.000 0.00 0.00 0.00 4.85
603 1761 1.005332 TGACCTCTCTCTCTCCACCAG 59.995 57.143 0.00 0.00 0.00 4.00
604 1762 1.076438 TGACCTCTCTCTCTCCACCA 58.924 55.000 0.00 0.00 0.00 4.17
605 1763 2.031120 CATGACCTCTCTCTCTCCACC 58.969 57.143 0.00 0.00 0.00 4.61
606 1764 1.408702 GCATGACCTCTCTCTCTCCAC 59.591 57.143 0.00 0.00 0.00 4.02
607 1765 1.687682 GGCATGACCTCTCTCTCTCCA 60.688 57.143 0.00 0.00 34.51 3.86
608 1766 1.039856 GGCATGACCTCTCTCTCTCC 58.960 60.000 0.00 0.00 34.51 3.71
609 1767 0.667993 CGGCATGACCTCTCTCTCTC 59.332 60.000 0.00 0.00 35.61 3.20
610 1768 1.391157 GCGGCATGACCTCTCTCTCT 61.391 60.000 0.00 0.00 35.61 3.10
614 1772 1.320344 TAACGCGGCATGACCTCTCT 61.320 55.000 12.47 0.00 35.61 3.10
618 1776 2.125269 GGTAACGCGGCATGACCT 60.125 61.111 12.47 0.00 35.61 3.85
630 1788 1.937562 GCCAAATGTTTGCGGGGTAAC 60.938 52.381 0.00 0.00 36.86 2.50
633 1791 2.740438 GCCAAATGTTTGCGGGGT 59.260 55.556 0.00 0.00 36.86 4.95
637 1795 1.595982 CGACACGCCAAATGTTTGCG 61.596 55.000 15.47 15.47 40.68 4.85
643 1801 1.787847 GGAGACGACACGCCAAATG 59.212 57.895 0.00 0.00 0.00 2.32
644 1802 4.278956 GGAGACGACACGCCAAAT 57.721 55.556 0.00 0.00 0.00 2.32
673 1831 2.025321 AGGGCGGTCTGGATGTAATTTT 60.025 45.455 0.00 0.00 0.00 1.82
678 1836 0.907704 AACAGGGCGGTCTGGATGTA 60.908 55.000 5.55 0.00 38.98 2.29
680 1838 1.746615 CAACAGGGCGGTCTGGATG 60.747 63.158 5.55 1.46 38.98 3.51
681 1839 1.274703 ATCAACAGGGCGGTCTGGAT 61.275 55.000 5.55 0.00 38.98 3.41
683 1841 1.450312 GATCAACAGGGCGGTCTGG 60.450 63.158 5.55 0.00 38.98 3.86
685 1843 1.330655 ATCGATCAACAGGGCGGTCT 61.331 55.000 0.00 0.00 0.00 3.85
686 1844 0.387929 TATCGATCAACAGGGCGGTC 59.612 55.000 0.00 0.00 0.00 4.79
702 1860 6.851222 AGTCATCCAACATCGATTTGTATC 57.149 37.500 14.81 0.00 0.00 2.24
703 1861 7.465916 CGAAAGTCATCCAACATCGATTTGTAT 60.466 37.037 14.81 6.24 34.59 2.29
704 1862 6.183360 CGAAAGTCATCCAACATCGATTTGTA 60.183 38.462 14.81 4.64 34.59 2.41
705 1863 5.390885 CGAAAGTCATCCAACATCGATTTGT 60.391 40.000 14.81 3.32 34.59 2.83
706 1864 5.023920 CGAAAGTCATCCAACATCGATTTG 58.976 41.667 0.00 4.36 34.59 2.32
707 1865 4.695455 ACGAAAGTCATCCAACATCGATTT 59.305 37.500 0.00 0.00 44.19 2.17
708 1866 4.253685 ACGAAAGTCATCCAACATCGATT 58.746 39.130 0.00 0.00 44.19 3.34
729 1887 3.438781 TCTTCCGCAACCATTCAATACAC 59.561 43.478 0.00 0.00 0.00 2.90
731 1889 4.900635 ATCTTCCGCAACCATTCAATAC 57.099 40.909 0.00 0.00 0.00 1.89
732 1890 5.649557 CAAATCTTCCGCAACCATTCAATA 58.350 37.500 0.00 0.00 0.00 1.90
733 1891 4.497300 CAAATCTTCCGCAACCATTCAAT 58.503 39.130 0.00 0.00 0.00 2.57
735 1893 2.352617 GCAAATCTTCCGCAACCATTCA 60.353 45.455 0.00 0.00 0.00 2.57
736 1894 2.262211 GCAAATCTTCCGCAACCATTC 58.738 47.619 0.00 0.00 0.00 2.67
737 1895 1.402720 CGCAAATCTTCCGCAACCATT 60.403 47.619 0.00 0.00 0.00 3.16
739 1897 0.886938 TCGCAAATCTTCCGCAACCA 60.887 50.000 0.00 0.00 0.00 3.67
740 1898 0.179189 CTCGCAAATCTTCCGCAACC 60.179 55.000 0.00 0.00 0.00 3.77
748 1906 0.949105 AACGCCGACTCGCAAATCTT 60.949 50.000 0.00 0.00 0.00 2.40
751 1909 1.225376 TTCAACGCCGACTCGCAAAT 61.225 50.000 0.00 0.00 0.00 2.32
756 1914 1.991430 CATCTTCAACGCCGACTCG 59.009 57.895 0.00 0.00 0.00 4.18
758 1916 1.005037 TGCATCTTCAACGCCGACT 60.005 52.632 0.00 0.00 0.00 4.18
759 1917 1.132640 GTGCATCTTCAACGCCGAC 59.867 57.895 0.00 0.00 0.00 4.79
760 1918 1.005037 AGTGCATCTTCAACGCCGA 60.005 52.632 0.00 0.00 0.00 5.54
761 1919 1.291184 TGAGTGCATCTTCAACGCCG 61.291 55.000 0.00 0.00 0.00 6.46
762 1920 1.089920 ATGAGTGCATCTTCAACGCC 58.910 50.000 0.00 0.00 0.00 5.68
769 1927 4.940046 CCAGACAGTTTATGAGTGCATCTT 59.060 41.667 0.00 0.00 35.94 2.40
777 1935 8.954950 AAGACATTATCCAGACAGTTTATGAG 57.045 34.615 0.00 0.00 0.00 2.90
779 1937 9.778993 CAAAAGACATTATCCAGACAGTTTATG 57.221 33.333 0.00 0.00 0.00 1.90
980 2139 1.229853 GAAAGAGTGGGGGAGGGGA 60.230 63.158 0.00 0.00 0.00 4.81
982 2141 0.548510 GATGAAAGAGTGGGGGAGGG 59.451 60.000 0.00 0.00 0.00 4.30
983 2142 1.211457 CTGATGAAAGAGTGGGGGAGG 59.789 57.143 0.00 0.00 0.00 4.30
1168 2398 0.536724 TGTCCATGTCCATGTCGAGG 59.463 55.000 6.53 0.00 37.11 4.63
1169 2399 2.207590 CATGTCCATGTCCATGTCGAG 58.792 52.381 11.70 0.00 37.11 4.04
1170 2400 1.134431 CCATGTCCATGTCCATGTCGA 60.134 52.381 16.31 0.00 37.37 4.20
1171 2401 1.134431 TCCATGTCCATGTCCATGTCG 60.134 52.381 16.31 6.48 37.37 4.35
1172 2402 2.292267 GTCCATGTCCATGTCCATGTC 58.708 52.381 16.31 8.66 37.37 3.06
1173 2403 1.634973 TGTCCATGTCCATGTCCATGT 59.365 47.619 16.31 0.00 37.37 3.21
1524 4769 3.427528 CAGTACACACACGGACACATTAC 59.572 47.826 0.00 0.00 0.00 1.89
1546 4799 6.576684 GGATCTTAGTTACATTCGTACTACGC 59.423 42.308 3.57 0.00 42.21 4.42
1548 4801 7.855545 TCGGATCTTAGTTACATTCGTACTAC 58.144 38.462 0.00 0.00 0.00 2.73
1550 4803 6.932356 TCGGATCTTAGTTACATTCGTACT 57.068 37.500 0.00 0.00 0.00 2.73
1551 4804 7.325579 GGAATCGGATCTTAGTTACATTCGTAC 59.674 40.741 0.00 0.00 0.00 3.67
1552 4805 7.013559 TGGAATCGGATCTTAGTTACATTCGTA 59.986 37.037 0.00 0.00 0.00 3.43
1553 4806 6.183360 TGGAATCGGATCTTAGTTACATTCGT 60.183 38.462 0.00 0.00 0.00 3.85
1555 4808 7.711339 AGTTGGAATCGGATCTTAGTTACATTC 59.289 37.037 0.00 0.00 0.00 2.67
1595 4856 0.324943 AATCCAGGTTCCTCCGTGTG 59.675 55.000 0.00 0.00 41.99 3.82
1637 4921 9.220906 TGTTACCTGGGATGTTTCTATAATACT 57.779 33.333 0.00 0.00 0.00 2.12
1639 4923 9.220906 ACTGTTACCTGGGATGTTTCTATAATA 57.779 33.333 0.00 0.00 0.00 0.98
1640 4924 8.102484 ACTGTTACCTGGGATGTTTCTATAAT 57.898 34.615 0.00 0.00 0.00 1.28
1641 4925 7.504926 ACTGTTACCTGGGATGTTTCTATAA 57.495 36.000 0.00 0.00 0.00 0.98
1651 4935 2.919602 ACCATCAACTGTTACCTGGGAT 59.080 45.455 15.39 2.73 0.00 3.85
1656 4940 5.385198 ACATTTCACCATCAACTGTTACCT 58.615 37.500 0.00 0.00 0.00 3.08
1664 4948 5.066505 GGATCCAGTACATTTCACCATCAAC 59.933 44.000 6.95 0.00 0.00 3.18
1668 4952 4.385643 CCTGGATCCAGTACATTTCACCAT 60.386 45.833 34.49 0.00 42.15 3.55
1673 4957 2.213499 CGCCTGGATCCAGTACATTTC 58.787 52.381 34.49 15.91 42.15 2.17
1678 4962 1.144057 CACCGCCTGGATCCAGTAC 59.856 63.158 34.49 25.90 42.15 2.73
1682 4966 3.230284 GATCACCGCCTGGATCCA 58.770 61.111 15.27 15.27 39.21 3.41
1688 4972 2.202987 GCAGAGGATCACCGCCTG 60.203 66.667 0.00 0.00 41.23 4.85
1689 4973 2.364842 AGCAGAGGATCACCGCCT 60.365 61.111 0.00 0.00 41.83 5.52
1693 4993 1.836802 AGGAAAGAGCAGAGGATCACC 59.163 52.381 0.00 0.00 37.82 4.02
1735 5040 3.119919 CGGTACTGACTTCACCTACTGAC 60.120 52.174 0.00 0.00 0.00 3.51
1736 5041 3.079578 CGGTACTGACTTCACCTACTGA 58.920 50.000 0.00 0.00 0.00 3.41
1755 5060 4.906065 ACATTGTTCATCCATCAATCGG 57.094 40.909 0.00 0.00 30.74 4.18
1771 5076 5.335127 GCAAGTTCAGTATTGCCTACATTG 58.665 41.667 0.00 0.00 44.76 2.82
1811 5139 1.541588 GTTTGCTTCTGGTGTCATCCC 59.458 52.381 0.00 0.00 0.00 3.85
1825 5153 1.687123 ACTCACTAGTGACGGTTTGCT 59.313 47.619 21.74 0.16 35.46 3.91
1826 5154 2.150397 ACTCACTAGTGACGGTTTGC 57.850 50.000 21.74 0.00 35.46 3.68
1832 5160 4.491234 AACTCTCAACTCACTAGTGACG 57.509 45.455 21.74 18.41 35.62 4.35
1842 5170 8.707839 CATAAGAAACTCTGAAACTCTCAACTC 58.292 37.037 0.00 0.00 32.17 3.01
1843 5171 7.172361 GCATAAGAAACTCTGAAACTCTCAACT 59.828 37.037 0.00 0.00 32.17 3.16
1844 5172 7.172361 AGCATAAGAAACTCTGAAACTCTCAAC 59.828 37.037 0.00 0.00 32.17 3.18
1845 5173 7.220030 AGCATAAGAAACTCTGAAACTCTCAA 58.780 34.615 0.00 0.00 32.17 3.02
1846 5174 6.763355 AGCATAAGAAACTCTGAAACTCTCA 58.237 36.000 0.00 0.00 0.00 3.27
1847 5175 7.010091 GCTAGCATAAGAAACTCTGAAACTCTC 59.990 40.741 10.63 0.00 0.00 3.20
1848 5176 6.816140 GCTAGCATAAGAAACTCTGAAACTCT 59.184 38.462 10.63 0.00 0.00 3.24
1849 5177 6.591834 TGCTAGCATAAGAAACTCTGAAACTC 59.408 38.462 14.93 0.00 0.00 3.01
1850 5178 6.467677 TGCTAGCATAAGAAACTCTGAAACT 58.532 36.000 14.93 0.00 0.00 2.66
1851 5179 6.370166 ACTGCTAGCATAAGAAACTCTGAAAC 59.630 38.462 19.72 0.00 0.00 2.78
1852 5180 6.467677 ACTGCTAGCATAAGAAACTCTGAAA 58.532 36.000 19.72 0.00 0.00 2.69
1853 5181 6.042638 ACTGCTAGCATAAGAAACTCTGAA 57.957 37.500 19.72 0.00 0.00 3.02
1854 5182 5.667539 ACTGCTAGCATAAGAAACTCTGA 57.332 39.130 19.72 0.00 0.00 3.27
1855 5183 6.183360 GGAAACTGCTAGCATAAGAAACTCTG 60.183 42.308 19.72 4.18 0.00 3.35
1856 5184 5.877564 GGAAACTGCTAGCATAAGAAACTCT 59.122 40.000 19.72 0.00 0.00 3.24
1857 5185 5.065346 GGGAAACTGCTAGCATAAGAAACTC 59.935 44.000 19.72 6.52 0.00 3.01
1858 5186 4.944317 GGGAAACTGCTAGCATAAGAAACT 59.056 41.667 19.72 0.00 0.00 2.66
1859 5187 4.700213 TGGGAAACTGCTAGCATAAGAAAC 59.300 41.667 19.72 7.10 0.00 2.78
1860 5188 4.917385 TGGGAAACTGCTAGCATAAGAAA 58.083 39.130 19.72 0.00 0.00 2.52
1861 5189 4.019321 ACTGGGAAACTGCTAGCATAAGAA 60.019 41.667 19.72 0.31 0.00 2.52
1862 5190 3.519510 ACTGGGAAACTGCTAGCATAAGA 59.480 43.478 19.72 0.00 0.00 2.10
1863 5191 3.878778 ACTGGGAAACTGCTAGCATAAG 58.121 45.455 19.72 9.54 0.00 1.73
1864 5192 4.261801 GAACTGGGAAACTGCTAGCATAA 58.738 43.478 19.72 0.00 0.00 1.90
1865 5193 3.678806 CGAACTGGGAAACTGCTAGCATA 60.679 47.826 19.72 0.00 0.00 3.14
1866 5194 2.716217 GAACTGGGAAACTGCTAGCAT 58.284 47.619 19.72 2.78 0.00 3.79
1867 5195 1.608025 CGAACTGGGAAACTGCTAGCA 60.608 52.381 18.22 18.22 0.00 3.49
1868 5196 1.079503 CGAACTGGGAAACTGCTAGC 58.920 55.000 8.10 8.10 0.00 3.42
1869 5197 2.457366 ACGAACTGGGAAACTGCTAG 57.543 50.000 0.00 0.00 0.00 3.42
1870 5198 2.489971 CAACGAACTGGGAAACTGCTA 58.510 47.619 0.00 0.00 0.00 3.49
1871 5199 1.308998 CAACGAACTGGGAAACTGCT 58.691 50.000 0.00 0.00 0.00 4.24
1872 5200 0.317854 GCAACGAACTGGGAAACTGC 60.318 55.000 0.00 0.00 0.00 4.40
1873 5201 1.002468 CAGCAACGAACTGGGAAACTG 60.002 52.381 0.00 0.00 0.00 3.16
1874 5202 1.308998 CAGCAACGAACTGGGAAACT 58.691 50.000 0.00 0.00 0.00 2.66
1875 5203 3.845625 CAGCAACGAACTGGGAAAC 57.154 52.632 0.00 0.00 0.00 2.78
1881 5209 4.944962 TTCATAATCCAGCAACGAACTG 57.055 40.909 0.00 0.00 34.82 3.16
1882 5210 5.185454 TGATTCATAATCCAGCAACGAACT 58.815 37.500 0.00 0.00 37.09 3.01
1883 5211 5.484173 TGATTCATAATCCAGCAACGAAC 57.516 39.130 0.00 0.00 37.09 3.95
1904 5232 7.450124 AATTCAGCTCATTATCTAGGCATTG 57.550 36.000 0.00 0.00 0.00 2.82
1944 5272 1.736645 ACGAATGGAGCGACAACGG 60.737 57.895 13.88 0.37 40.15 4.44
1947 5275 2.442212 TTACACGAATGGAGCGACAA 57.558 45.000 0.00 0.00 0.00 3.18
1948 5276 2.094442 TCATTACACGAATGGAGCGACA 60.094 45.455 0.00 0.00 44.50 4.35
1958 5286 3.462982 ACACAACAGCTCATTACACGAA 58.537 40.909 0.00 0.00 0.00 3.85
1962 5290 4.335400 TCAGACACAACAGCTCATTACA 57.665 40.909 0.00 0.00 0.00 2.41
1985 5362 3.276857 GAAATCCAGCAGCAGAATCTCA 58.723 45.455 0.00 0.00 0.00 3.27
1990 5367 3.076079 TGATGAAATCCAGCAGCAGAA 57.924 42.857 0.00 0.00 44.73 3.02
1999 5376 2.083774 GCCGACAACTGATGAAATCCA 58.916 47.619 0.00 0.00 44.73 3.41
2038 5426 0.109532 TCCATCGGCTGTGTCCAAAA 59.890 50.000 0.00 0.00 0.00 2.44
2039 5427 0.109532 TTCCATCGGCTGTGTCCAAA 59.890 50.000 0.00 0.00 0.00 3.28
2040 5428 0.321564 CTTCCATCGGCTGTGTCCAA 60.322 55.000 0.00 0.00 0.00 3.53
2042 5430 0.321653 AACTTCCATCGGCTGTGTCC 60.322 55.000 0.00 0.00 0.00 4.02
2048 5436 1.098050 GCAATCAACTTCCATCGGCT 58.902 50.000 0.00 0.00 0.00 5.52
2053 5441 2.029649 GTGCACTGCAATCAACTTCCAT 60.030 45.455 10.32 0.00 41.47 3.41
2054 5442 1.337703 GTGCACTGCAATCAACTTCCA 59.662 47.619 10.32 0.00 41.47 3.53
2101 5489 3.994392 TGTTCAGAATTTCGGTACTCTGC 59.006 43.478 7.55 0.00 36.15 4.26
2139 5527 1.933853 GGCAAATGTAGCTACCAGTCG 59.066 52.381 21.01 7.16 0.00 4.18
2157 5549 0.727398 GGATAAAGCAGTCACGTGGC 59.273 55.000 13.44 13.44 0.00 5.01
2181 5573 0.682852 TGTGTTTCAGTACTCCGGGG 59.317 55.000 0.00 0.00 0.00 5.73
2185 5577 4.894784 TCCATCTTGTGTTTCAGTACTCC 58.105 43.478 0.00 0.00 0.00 3.85
2186 5578 6.428159 ACATTCCATCTTGTGTTTCAGTACTC 59.572 38.462 0.00 0.00 0.00 2.59
2189 5581 5.473162 CCACATTCCATCTTGTGTTTCAGTA 59.527 40.000 2.77 0.00 41.27 2.74
2208 5600 0.673437 CAAAGTTCGCCAACCCACAT 59.327 50.000 0.00 0.00 32.22 3.21
2209 5601 1.388065 CCAAAGTTCGCCAACCCACA 61.388 55.000 0.00 0.00 32.22 4.17
2210 5602 1.362355 CCAAAGTTCGCCAACCCAC 59.638 57.895 0.00 0.00 32.22 4.61
2211 5603 0.183014 TACCAAAGTTCGCCAACCCA 59.817 50.000 0.00 0.00 32.22 4.51
2212 5604 1.320507 TTACCAAAGTTCGCCAACCC 58.679 50.000 0.00 0.00 32.22 4.11
2213 5605 3.243602 ACATTTACCAAAGTTCGCCAACC 60.244 43.478 0.00 0.00 32.22 3.77
2214 5606 3.972403 ACATTTACCAAAGTTCGCCAAC 58.028 40.909 0.00 0.00 0.00 3.77
2215 5607 5.769484 TTACATTTACCAAAGTTCGCCAA 57.231 34.783 0.00 0.00 0.00 4.52
2216 5608 5.769484 TTTACATTTACCAAAGTTCGCCA 57.231 34.783 0.00 0.00 0.00 5.69
2217 5609 6.361481 GTCTTTTACATTTACCAAAGTTCGCC 59.639 38.462 0.00 0.00 0.00 5.54
2218 5610 6.913673 TGTCTTTTACATTTACCAAAGTTCGC 59.086 34.615 0.00 0.00 31.43 4.70
2219 5611 8.844441 TTGTCTTTTACATTTACCAAAGTTCG 57.156 30.769 0.00 0.00 38.10 3.95
2220 5612 8.752254 GCTTGTCTTTTACATTTACCAAAGTTC 58.248 33.333 0.00 0.00 38.10 3.01
2221 5613 8.474831 AGCTTGTCTTTTACATTTACCAAAGTT 58.525 29.630 0.00 0.00 38.10 2.66
2222 5614 7.920682 CAGCTTGTCTTTTACATTTACCAAAGT 59.079 33.333 0.00 0.00 38.10 2.66
2223 5615 7.920682 ACAGCTTGTCTTTTACATTTACCAAAG 59.079 33.333 0.00 0.00 38.10 2.77
2224 5616 7.777095 ACAGCTTGTCTTTTACATTTACCAAA 58.223 30.769 0.00 0.00 38.10 3.28
2225 5617 7.341445 ACAGCTTGTCTTTTACATTTACCAA 57.659 32.000 0.00 0.00 38.10 3.67
2226 5618 6.952773 ACAGCTTGTCTTTTACATTTACCA 57.047 33.333 0.00 0.00 38.10 3.25
2227 5619 6.640907 CCAACAGCTTGTCTTTTACATTTACC 59.359 38.462 0.00 0.00 38.10 2.85
2228 5620 6.143919 GCCAACAGCTTGTCTTTTACATTTAC 59.856 38.462 0.00 0.00 38.10 2.01
2229 5621 6.212955 GCCAACAGCTTGTCTTTTACATTTA 58.787 36.000 0.00 0.00 38.10 1.40
2230 5622 5.049828 GCCAACAGCTTGTCTTTTACATTT 58.950 37.500 0.00 0.00 38.10 2.32
2231 5623 4.620982 GCCAACAGCTTGTCTTTTACATT 58.379 39.130 0.00 0.00 38.10 2.71
2232 5624 4.243007 GCCAACAGCTTGTCTTTTACAT 57.757 40.909 0.00 0.00 38.10 2.29
2233 5625 3.708563 GCCAACAGCTTGTCTTTTACA 57.291 42.857 0.00 0.00 38.99 2.41
2245 5637 2.125106 CCGACCCTAGCCAACAGC 60.125 66.667 0.00 0.00 44.25 4.40
2246 5638 1.987855 TCCCGACCCTAGCCAACAG 60.988 63.158 0.00 0.00 0.00 3.16
2247 5639 2.120940 TCCCGACCCTAGCCAACA 59.879 61.111 0.00 0.00 0.00 3.33
2248 5640 2.582978 GTCCCGACCCTAGCCAAC 59.417 66.667 0.00 0.00 0.00 3.77
2249 5641 2.686106 GGTCCCGACCCTAGCCAA 60.686 66.667 2.16 0.00 45.68 4.52
2265 5657 1.001974 TCGTTTGACCACCTCATCAGG 59.998 52.381 0.00 0.00 46.87 3.86
2266 5658 2.455674 TCGTTTGACCACCTCATCAG 57.544 50.000 0.00 0.00 0.00 2.90
2267 5659 2.038426 ACATCGTTTGACCACCTCATCA 59.962 45.455 0.00 0.00 0.00 3.07
2268 5660 2.673368 GACATCGTTTGACCACCTCATC 59.327 50.000 0.00 0.00 0.00 2.92
2269 5661 2.038426 TGACATCGTTTGACCACCTCAT 59.962 45.455 0.00 0.00 0.00 2.90
2270 5662 1.414550 TGACATCGTTTGACCACCTCA 59.585 47.619 0.00 0.00 0.00 3.86
2271 5663 2.163818 TGACATCGTTTGACCACCTC 57.836 50.000 0.00 0.00 0.00 3.85
2272 5664 2.426522 CATGACATCGTTTGACCACCT 58.573 47.619 0.00 0.00 0.00 4.00
2273 5665 1.135689 GCATGACATCGTTTGACCACC 60.136 52.381 0.00 0.00 0.00 4.61
2274 5666 1.806542 AGCATGACATCGTTTGACCAC 59.193 47.619 0.00 0.00 0.00 4.16
2275 5667 1.805943 CAGCATGACATCGTTTGACCA 59.194 47.619 0.00 0.00 39.69 4.02
2276 5668 2.076100 TCAGCATGACATCGTTTGACC 58.924 47.619 0.00 0.00 42.56 4.02
2277 5669 2.475187 GCTCAGCATGACATCGTTTGAC 60.475 50.000 0.00 0.00 42.56 3.18
2278 5670 1.733912 GCTCAGCATGACATCGTTTGA 59.266 47.619 0.00 0.00 42.56 2.69
2279 5671 1.736126 AGCTCAGCATGACATCGTTTG 59.264 47.619 0.00 0.00 42.56 2.93
2284 5676 1.934525 CACTCAGCTCAGCATGACATC 59.065 52.381 0.00 0.00 42.56 3.06
2286 5678 0.683412 ACACTCAGCTCAGCATGACA 59.317 50.000 0.00 0.00 42.56 3.58
2289 5681 1.077123 GTGACACTCAGCTCAGCATG 58.923 55.000 0.00 0.00 37.54 4.06
2290 5682 0.036577 GGTGACACTCAGCTCAGCAT 60.037 55.000 0.00 0.00 41.34 3.79
2293 5685 0.037512 CAGGGTGACACTCAGCTCAG 60.038 60.000 8.48 0.00 43.82 3.35
2295 5687 0.901124 ATCAGGGTGACACTCAGCTC 59.099 55.000 8.48 0.00 43.82 4.09
2300 5692 4.192317 GTCCAAATATCAGGGTGACACTC 58.808 47.826 5.39 0.17 0.00 3.51
2306 5698 4.194640 CTCACTGTCCAAATATCAGGGTG 58.805 47.826 0.00 0.00 34.63 4.61
2308 5700 4.080919 TGACTCACTGTCCAAATATCAGGG 60.081 45.833 0.00 0.00 44.75 4.45
2310 5702 5.579904 CACTGACTCACTGTCCAAATATCAG 59.420 44.000 0.00 0.00 44.75 2.90
2312 5704 5.724328 TCACTGACTCACTGTCCAAATATC 58.276 41.667 0.00 0.00 44.75 1.63
2314 5706 5.245977 TGATCACTGACTCACTGTCCAAATA 59.754 40.000 0.00 0.00 44.75 1.40
2315 5707 4.040829 TGATCACTGACTCACTGTCCAAAT 59.959 41.667 0.00 0.00 44.75 2.32
2317 5709 2.965147 TGATCACTGACTCACTGTCCAA 59.035 45.455 0.00 0.00 44.75 3.53
2318 5710 2.597455 TGATCACTGACTCACTGTCCA 58.403 47.619 0.00 0.00 44.75 4.02
2320 5712 4.717233 AGATGATCACTGACTCACTGTC 57.283 45.455 0.00 0.00 45.54 3.51
2321 5713 5.504853 TCTAGATGATCACTGACTCACTGT 58.495 41.667 0.00 0.00 0.00 3.55
2322 5714 6.638096 ATCTAGATGATCACTGACTCACTG 57.362 41.667 3.89 0.00 0.00 3.66
2363 5755 9.850628 CTGCAAAGAAATTCAAGATCATTTAGA 57.149 29.630 0.00 0.00 0.00 2.10
2364 5756 9.850628 TCTGCAAAGAAATTCAAGATCATTTAG 57.149 29.630 0.00 0.00 0.00 1.85
2366 5758 9.151471 CATCTGCAAAGAAATTCAAGATCATTT 57.849 29.630 0.00 0.00 0.00 2.32
2367 5759 7.764443 CCATCTGCAAAGAAATTCAAGATCATT 59.236 33.333 0.00 0.00 0.00 2.57
2368 5760 7.123697 TCCATCTGCAAAGAAATTCAAGATCAT 59.876 33.333 0.00 0.00 0.00 2.45
2369 5761 6.434965 TCCATCTGCAAAGAAATTCAAGATCA 59.565 34.615 0.00 0.00 0.00 2.92
2370 5762 6.860080 TCCATCTGCAAAGAAATTCAAGATC 58.140 36.000 0.00 0.00 0.00 2.75
2371 5763 6.436532 ACTCCATCTGCAAAGAAATTCAAGAT 59.563 34.615 0.00 0.00 0.00 2.40
2372 5764 5.771666 ACTCCATCTGCAAAGAAATTCAAGA 59.228 36.000 0.00 0.00 0.00 3.02
2373 5765 6.022163 ACTCCATCTGCAAAGAAATTCAAG 57.978 37.500 0.00 0.00 0.00 3.02
2374 5766 6.489700 TGTACTCCATCTGCAAAGAAATTCAA 59.510 34.615 0.00 0.00 0.00 2.69
2375 5767 6.003326 TGTACTCCATCTGCAAAGAAATTCA 58.997 36.000 0.00 0.00 0.00 2.57
2376 5768 6.500684 TGTACTCCATCTGCAAAGAAATTC 57.499 37.500 0.00 0.00 0.00 2.17
2377 5769 6.899393 TTGTACTCCATCTGCAAAGAAATT 57.101 33.333 0.00 0.00 0.00 1.82
2378 5770 6.899393 TTTGTACTCCATCTGCAAAGAAAT 57.101 33.333 0.00 0.00 0.00 2.17
2379 5771 6.899393 ATTTGTACTCCATCTGCAAAGAAA 57.101 33.333 0.00 0.00 33.42 2.52
2380 5772 6.899393 AATTTGTACTCCATCTGCAAAGAA 57.101 33.333 0.00 0.00 33.42 2.52
2381 5773 8.049117 AGATAATTTGTACTCCATCTGCAAAGA 58.951 33.333 0.00 0.00 33.42 2.52
2382 5774 8.218338 AGATAATTTGTACTCCATCTGCAAAG 57.782 34.615 0.00 0.00 33.42 2.77
2383 5775 7.283127 GGAGATAATTTGTACTCCATCTGCAAA 59.717 37.037 0.00 0.00 45.53 3.68
2384 5776 6.767902 GGAGATAATTTGTACTCCATCTGCAA 59.232 38.462 0.00 0.00 45.53 4.08
2385 5777 6.291377 GGAGATAATTTGTACTCCATCTGCA 58.709 40.000 0.00 0.00 45.53 4.41
2386 5778 6.793492 GGAGATAATTTGTACTCCATCTGC 57.207 41.667 0.00 0.00 45.53 4.26
2392 5784 7.391148 TTTGCAAGGAGATAATTTGTACTCC 57.609 36.000 0.00 0.00 46.28 3.85
2428 5820 7.768120 TGCTTTAGAAATCCTTTGAAGCAAAAA 59.232 29.630 5.50 0.00 39.18 1.94
2429 5821 7.271511 TGCTTTAGAAATCCTTTGAAGCAAAA 58.728 30.769 5.50 0.00 39.18 2.44
2430 5822 6.815089 TGCTTTAGAAATCCTTTGAAGCAAA 58.185 32.000 5.50 0.00 39.18 3.68
2431 5823 6.403866 TGCTTTAGAAATCCTTTGAAGCAA 57.596 33.333 5.50 0.00 39.18 3.91
2432 5824 6.040842 ACTTGCTTTAGAAATCCTTTGAAGCA 59.959 34.615 3.98 3.98 39.76 3.91
2433 5825 6.450545 ACTTGCTTTAGAAATCCTTTGAAGC 58.549 36.000 0.00 0.00 35.99 3.86
2434 5826 7.880105 AGACTTGCTTTAGAAATCCTTTGAAG 58.120 34.615 0.00 0.00 0.00 3.02
2435 5827 7.307989 CGAGACTTGCTTTAGAAATCCTTTGAA 60.308 37.037 0.00 0.00 0.00 2.69
2436 5828 6.147821 CGAGACTTGCTTTAGAAATCCTTTGA 59.852 38.462 0.00 0.00 0.00 2.69
2437 5829 6.310197 CGAGACTTGCTTTAGAAATCCTTTG 58.690 40.000 0.00 0.00 0.00 2.77
2438 5830 5.412904 CCGAGACTTGCTTTAGAAATCCTTT 59.587 40.000 0.00 0.00 0.00 3.11
2439 5831 4.938226 CCGAGACTTGCTTTAGAAATCCTT 59.062 41.667 0.00 0.00 0.00 3.36
2440 5832 4.223032 TCCGAGACTTGCTTTAGAAATCCT 59.777 41.667 0.00 0.00 0.00 3.24
2441 5833 4.504858 TCCGAGACTTGCTTTAGAAATCC 58.495 43.478 0.00 0.00 0.00 3.01
2442 5834 4.568760 CCTCCGAGACTTGCTTTAGAAATC 59.431 45.833 0.00 0.00 0.00 2.17
2443 5835 4.223032 TCCTCCGAGACTTGCTTTAGAAAT 59.777 41.667 0.00 0.00 0.00 2.17
2444 5836 3.576982 TCCTCCGAGACTTGCTTTAGAAA 59.423 43.478 0.00 0.00 0.00 2.52
2445 5837 3.162666 TCCTCCGAGACTTGCTTTAGAA 58.837 45.455 0.00 0.00 0.00 2.10
2446 5838 2.803956 TCCTCCGAGACTTGCTTTAGA 58.196 47.619 0.00 0.00 0.00 2.10
2447 5839 3.810310 ATCCTCCGAGACTTGCTTTAG 57.190 47.619 0.00 0.00 0.00 1.85
2448 5840 3.118738 GGAATCCTCCGAGACTTGCTTTA 60.119 47.826 0.00 0.00 30.03 1.85
2449 5841 2.355209 GGAATCCTCCGAGACTTGCTTT 60.355 50.000 0.00 0.00 30.03 3.51
2450 5842 1.208293 GGAATCCTCCGAGACTTGCTT 59.792 52.381 0.00 0.00 30.03 3.91
2451 5843 0.827368 GGAATCCTCCGAGACTTGCT 59.173 55.000 0.00 0.00 30.03 3.91
2452 5844 3.371087 GGAATCCTCCGAGACTTGC 57.629 57.895 0.00 0.00 30.03 4.01
2464 5856 7.116519 CGTAAGAAATTCTAAGGATCGGAATCC 59.883 40.741 0.00 0.00 46.80 3.01
2465 5857 7.652507 ACGTAAGAAATTCTAAGGATCGGAATC 59.347 37.037 0.00 0.00 43.62 2.52
2466 5858 7.498443 ACGTAAGAAATTCTAAGGATCGGAAT 58.502 34.615 0.00 0.00 43.62 3.01
2467 5859 6.870769 ACGTAAGAAATTCTAAGGATCGGAA 58.129 36.000 0.00 0.00 43.62 4.30
2468 5860 6.461110 ACGTAAGAAATTCTAAGGATCGGA 57.539 37.500 0.00 0.00 43.62 4.55
2469 5861 6.359087 CGTACGTAAGAAATTCTAAGGATCGG 59.641 42.308 7.22 0.00 43.62 4.18
2470 5862 6.909357 ACGTACGTAAGAAATTCTAAGGATCG 59.091 38.462 21.41 2.40 43.62 3.69
2471 5863 7.912250 TCACGTACGTAAGAAATTCTAAGGATC 59.088 37.037 22.34 0.00 43.62 3.36
2472 5864 7.765307 TCACGTACGTAAGAAATTCTAAGGAT 58.235 34.615 22.34 0.00 43.62 3.24
2473 5865 7.094634 ACTCACGTACGTAAGAAATTCTAAGGA 60.095 37.037 25.09 9.95 43.62 3.36
2474 5866 7.025963 ACTCACGTACGTAAGAAATTCTAAGG 58.974 38.462 25.09 5.95 43.62 2.69
2475 5867 8.363755 CAACTCACGTACGTAAGAAATTCTAAG 58.636 37.037 25.09 6.39 43.62 2.18
2476 5868 7.862372 ACAACTCACGTACGTAAGAAATTCTAA 59.138 33.333 25.09 0.00 43.62 2.10
2477 5869 7.362662 ACAACTCACGTACGTAAGAAATTCTA 58.637 34.615 25.09 0.00 43.62 2.10
2478 5870 6.211515 ACAACTCACGTACGTAAGAAATTCT 58.788 36.000 25.09 0.00 43.62 2.40
2479 5871 6.443876 ACAACTCACGTACGTAAGAAATTC 57.556 37.500 25.09 0.00 43.62 2.17
2480 5872 6.833342 AACAACTCACGTACGTAAGAAATT 57.167 33.333 25.09 11.90 43.62 1.82
2481 5873 6.292488 CCAAACAACTCACGTACGTAAGAAAT 60.292 38.462 25.09 7.89 43.62 2.17
2482 5874 5.005586 CCAAACAACTCACGTACGTAAGAAA 59.994 40.000 25.09 6.07 43.62 2.52
2483 5875 4.503734 CCAAACAACTCACGTACGTAAGAA 59.496 41.667 25.09 8.47 43.62 2.52
2484 5876 4.043750 CCAAACAACTCACGTACGTAAGA 58.956 43.478 25.09 16.00 43.62 2.10
2486 5878 3.779759 ACCAAACAACTCACGTACGTAA 58.220 40.909 22.34 5.64 0.00 3.18
2487 5879 3.435105 ACCAAACAACTCACGTACGTA 57.565 42.857 22.34 8.85 0.00 3.57
2488 5880 2.298411 ACCAAACAACTCACGTACGT 57.702 45.000 16.72 16.72 0.00 3.57
2489 5881 2.346924 CGAACCAAACAACTCACGTACG 60.347 50.000 15.01 15.01 0.00 3.67
2490 5882 2.604462 ACGAACCAAACAACTCACGTAC 59.396 45.455 0.00 0.00 0.00 3.67
2491 5883 2.891112 ACGAACCAAACAACTCACGTA 58.109 42.857 0.00 0.00 0.00 3.57
2492 5884 1.729284 ACGAACCAAACAACTCACGT 58.271 45.000 0.00 0.00 0.00 4.49
2493 5885 2.220133 CCTACGAACCAAACAACTCACG 59.780 50.000 0.00 0.00 0.00 4.35
2494 5886 3.460103 TCCTACGAACCAAACAACTCAC 58.540 45.455 0.00 0.00 0.00 3.51
2495 5887 3.823281 TCCTACGAACCAAACAACTCA 57.177 42.857 0.00 0.00 0.00 3.41
2496 5888 5.237779 TGAAATCCTACGAACCAAACAACTC 59.762 40.000 0.00 0.00 0.00 3.01
2497 5889 5.127491 TGAAATCCTACGAACCAAACAACT 58.873 37.500 0.00 0.00 0.00 3.16
2498 5890 5.427036 TGAAATCCTACGAACCAAACAAC 57.573 39.130 0.00 0.00 0.00 3.32
2499 5891 6.452494 TTTGAAATCCTACGAACCAAACAA 57.548 33.333 0.00 0.00 0.00 2.83
2500 5892 6.452494 TTTTGAAATCCTACGAACCAAACA 57.548 33.333 0.00 0.00 0.00 2.83
2501 5893 7.568679 GCATTTTTGAAATCCTACGAACCAAAC 60.569 37.037 0.00 0.00 0.00 2.93
2502 5894 6.422400 GCATTTTTGAAATCCTACGAACCAAA 59.578 34.615 0.00 0.00 0.00 3.28
2503 5895 5.923684 GCATTTTTGAAATCCTACGAACCAA 59.076 36.000 0.00 0.00 0.00 3.67
2504 5896 5.010112 TGCATTTTTGAAATCCTACGAACCA 59.990 36.000 0.00 0.00 0.00 3.67
2505 5897 5.465935 TGCATTTTTGAAATCCTACGAACC 58.534 37.500 0.00 0.00 0.00 3.62
2506 5898 8.745837 CATATGCATTTTTGAAATCCTACGAAC 58.254 33.333 3.54 0.00 0.00 3.95
2507 5899 8.681806 TCATATGCATTTTTGAAATCCTACGAA 58.318 29.630 3.54 0.00 0.00 3.85
2508 5900 8.219546 TCATATGCATTTTTGAAATCCTACGA 57.780 30.769 3.54 0.00 0.00 3.43
2509 5901 8.745837 GTTCATATGCATTTTTGAAATCCTACG 58.254 33.333 3.54 0.00 30.51 3.51
2510 5902 9.807649 AGTTCATATGCATTTTTGAAATCCTAC 57.192 29.630 3.54 1.02 30.51 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.