Multiple sequence alignment - TraesCS2A01G588900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G588900 chr2A 100.000 3863 0 0 1 3863 777837901 777834039 0.000000e+00 7134.0
1 TraesCS2A01G588900 chr2A 82.797 1959 311 20 992 2938 777614757 777612813 0.000000e+00 1727.0
2 TraesCS2A01G588900 chr2A 82.191 1999 301 33 860 2826 777624973 777622998 0.000000e+00 1668.0
3 TraesCS2A01G588900 chr2A 80.541 961 165 15 991 1946 778799514 778800457 0.000000e+00 719.0
4 TraesCS2A01G588900 chr2A 76.197 1399 267 45 993 2372 723061458 723062809 0.000000e+00 678.0
5 TraesCS2A01G588900 chr2A 80.171 817 96 22 4 780 777626052 777625262 5.640000e-153 551.0
6 TraesCS2A01G588900 chr2A 94.654 318 17 0 3546 3863 24395967 24395650 9.640000e-136 494.0
7 TraesCS2A01G588900 chr2A 77.540 187 29 9 2 177 777810148 777809964 2.460000e-17 100.0
8 TraesCS2A01G588900 chr2A 93.617 47 1 2 381 425 777974685 777974731 6.930000e-08 69.4
9 TraesCS2A01G588900 chr2D 84.289 2285 318 26 992 3253 635205734 635208000 0.000000e+00 2193.0
10 TraesCS2A01G588900 chr2D 82.749 1855 286 26 990 2826 635164351 635166189 0.000000e+00 1622.0
11 TraesCS2A01G588900 chr2D 75.522 1389 285 38 993 2372 588435398 588436740 7.040000e-177 630.0
12 TraesCS2A01G588900 chr2D 82.759 435 62 6 2 425 635163303 635163735 3.640000e-100 375.0
13 TraesCS2A01G588900 chr2D 77.717 368 34 14 438 780 635163786 635164130 8.530000e-42 182.0
14 TraesCS2A01G588900 chr2B 83.884 2271 329 25 992 3242 779260723 779262976 0.000000e+00 2132.0
15 TraesCS2A01G588900 chr2B 82.762 2042 301 32 836 2841 779181809 779183835 0.000000e+00 1773.0
16 TraesCS2A01G588900 chr2B 81.406 2049 320 32 817 2826 779253738 779255764 0.000000e+00 1616.0
17 TraesCS2A01G588900 chr2B 81.142 1681 264 34 1177 2825 779151067 779149408 0.000000e+00 1299.0
18 TraesCS2A01G588900 chr2B 76.286 1400 270 38 993 2372 711867341 711868698 0.000000e+00 689.0
19 TraesCS2A01G588900 chr2B 94.225 329 15 3 3536 3863 109337223 109337548 2.070000e-137 499.0
20 TraesCS2A01G588900 chr2B 85.667 300 30 6 3247 3545 779263256 779263543 1.740000e-78 303.0
21 TraesCS2A01G588900 chr2B 77.232 448 51 22 2 402 779252612 779253055 8.410000e-52 215.0
22 TraesCS2A01G588900 chr2B 78.073 301 37 17 221 506 779180538 779180824 3.090000e-36 163.0
23 TraesCS2A01G588900 chr3A 95.327 321 13 1 3545 3863 692336779 692337099 3.440000e-140 508.0
24 TraesCS2A01G588900 chr3B 95.283 318 15 0 3546 3863 728974358 728974041 4.450000e-139 505.0
25 TraesCS2A01G588900 chr3B 94.654 318 17 0 3546 3863 437813364 437813047 9.640000e-136 494.0
26 TraesCS2A01G588900 chr3B 72.543 346 71 15 993 1332 12304970 12304643 1.480000e-14 91.6
27 TraesCS2A01G588900 chr5A 94.984 319 16 0 3545 3863 126263545 126263863 5.760000e-138 501.0
28 TraesCS2A01G588900 chr7A 94.969 318 16 0 3546 3863 130299818 130300135 2.070000e-137 499.0
29 TraesCS2A01G588900 chr4A 94.444 324 17 1 3541 3863 609652599 609652922 7.450000e-137 497.0
30 TraesCS2A01G588900 chr4A 94.340 318 18 0 3546 3863 668744064 668744381 4.490000e-134 488.0
31 TraesCS2A01G588900 chr6D 78.788 99 16 3 1008 1105 10103686 10103592 1.160000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G588900 chr2A 777834039 777837901 3862 True 7134.000000 7134 100.0000 1 3863 1 chr2A.!!$R4 3862
1 TraesCS2A01G588900 chr2A 777612813 777614757 1944 True 1727.000000 1727 82.7970 992 2938 1 chr2A.!!$R2 1946
2 TraesCS2A01G588900 chr2A 777622998 777626052 3054 True 1109.500000 1668 81.1810 4 2826 2 chr2A.!!$R5 2822
3 TraesCS2A01G588900 chr2A 778799514 778800457 943 False 719.000000 719 80.5410 991 1946 1 chr2A.!!$F3 955
4 TraesCS2A01G588900 chr2A 723061458 723062809 1351 False 678.000000 678 76.1970 993 2372 1 chr2A.!!$F1 1379
5 TraesCS2A01G588900 chr2D 635205734 635208000 2266 False 2193.000000 2193 84.2890 992 3253 1 chr2D.!!$F2 2261
6 TraesCS2A01G588900 chr2D 635163303 635166189 2886 False 726.333333 1622 81.0750 2 2826 3 chr2D.!!$F3 2824
7 TraesCS2A01G588900 chr2D 588435398 588436740 1342 False 630.000000 630 75.5220 993 2372 1 chr2D.!!$F1 1379
8 TraesCS2A01G588900 chr2B 779149408 779151067 1659 True 1299.000000 1299 81.1420 1177 2825 1 chr2B.!!$R1 1648
9 TraesCS2A01G588900 chr2B 779260723 779263543 2820 False 1217.500000 2132 84.7755 992 3545 2 chr2B.!!$F5 2553
10 TraesCS2A01G588900 chr2B 779180538 779183835 3297 False 968.000000 1773 80.4175 221 2841 2 chr2B.!!$F3 2620
11 TraesCS2A01G588900 chr2B 779252612 779255764 3152 False 915.500000 1616 79.3190 2 2826 2 chr2B.!!$F4 2824
12 TraesCS2A01G588900 chr2B 711867341 711868698 1357 False 689.000000 689 76.2860 993 2372 1 chr2B.!!$F2 1379

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
518 619 0.109597 CAAAGAATCCAGCACCGCAC 60.110 55.0 0.0 0.0 0.0 5.34 F
1283 2323 0.178961 GCTTTCCCCAAGAACCCTGT 60.179 55.0 0.0 0.0 33.8 4.00 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1523 2566 0.037882 CTCGACCATGTCAGCAGTGT 60.038 55.0 0.00 0.00 32.09 3.55 R
3225 4360 0.175989 ACGTCCTGCTAAGCTTAGGC 59.824 55.0 29.93 22.59 39.06 3.93 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 7.619964 TTCCTAAAACCGGATTAATGAGTTC 57.380 36.000 9.46 0.00 0.00 3.01
41 42 5.532664 ACCGGATTAATGAGTTCTAGGAC 57.467 43.478 9.46 0.00 0.00 3.85
48 49 9.050601 GGATTAATGAGTTCTAGGACAAATGAG 57.949 37.037 3.42 0.00 0.00 2.90
88 89 5.824904 CAAATCAGTTTGGTCTATCCTGG 57.175 43.478 0.00 0.00 40.78 4.45
94 95 7.540474 TCAGTTTGGTCTATCCTGGATATAC 57.460 40.000 16.45 17.86 37.07 1.47
102 103 5.938710 GTCTATCCTGGATATACGTGTCTCA 59.061 44.000 16.45 0.00 0.00 3.27
103 104 6.600032 GTCTATCCTGGATATACGTGTCTCAT 59.400 42.308 16.45 0.00 0.00 2.90
104 105 5.906113 ATCCTGGATATACGTGTCTCATC 57.094 43.478 7.59 0.00 0.00 2.92
105 106 3.751698 TCCTGGATATACGTGTCTCATCG 59.248 47.826 0.00 0.00 0.00 3.84
106 107 3.493272 CTGGATATACGTGTCTCATCGC 58.507 50.000 0.00 0.00 0.00 4.58
110 111 4.383052 GGATATACGTGTCTCATCGCAAAG 59.617 45.833 0.00 0.00 0.00 2.77
112 113 0.317160 ACGTGTCTCATCGCAAAGGA 59.683 50.000 0.00 0.00 0.00 3.36
113 114 0.716108 CGTGTCTCATCGCAAAGGAC 59.284 55.000 0.00 0.00 0.00 3.85
117 118 3.189287 GTGTCTCATCGCAAAGGACAAAT 59.811 43.478 0.00 0.00 38.40 2.32
119 120 3.436704 GTCTCATCGCAAAGGACAAATGA 59.563 43.478 0.00 0.00 0.00 2.57
120 121 3.436704 TCTCATCGCAAAGGACAAATGAC 59.563 43.478 0.00 0.00 0.00 3.06
123 124 5.185454 TCATCGCAAAGGACAAATGACTAT 58.815 37.500 0.00 0.00 0.00 2.12
124 125 5.647658 TCATCGCAAAGGACAAATGACTATT 59.352 36.000 0.00 0.00 0.00 1.73
130 139 7.547227 GCAAAGGACAAATGACTATTAACCAT 58.453 34.615 0.00 0.00 0.00 3.55
140 149 5.754782 TGACTATTAACCATGTGCTCCAAT 58.245 37.500 0.00 0.00 0.00 3.16
153 162 2.231964 TGCTCCAATTTCCAGCAATCAC 59.768 45.455 1.09 0.00 40.22 3.06
281 321 6.682423 TTCACAACAGCCATATATGACAAG 57.318 37.500 14.54 2.42 0.00 3.16
284 324 7.056006 TCACAACAGCCATATATGACAAGAAT 58.944 34.615 14.54 0.00 0.00 2.40
289 329 9.807649 AACAGCCATATATGACAAGAATTTTTC 57.192 29.630 14.54 0.00 0.00 2.29
434 488 3.610677 CACGTTAACATCAGTGATGCGTA 59.389 43.478 29.10 19.59 43.15 4.42
435 489 4.267690 CACGTTAACATCAGTGATGCGTAT 59.732 41.667 29.10 16.82 43.15 3.06
436 490 4.503007 ACGTTAACATCAGTGATGCGTATC 59.497 41.667 29.10 18.94 43.15 2.24
442 534 1.069227 TCAGTGATGCGTATCCGATCG 60.069 52.381 8.51 8.51 35.63 3.69
466 558 1.918609 GATACCTTGAGTTGTCGTCGC 59.081 52.381 0.00 0.00 0.00 5.19
469 561 1.337817 CCTTGAGTTGTCGTCGCTCG 61.338 60.000 0.00 0.00 41.41 5.03
473 565 2.050714 GTTGTCGTCGCTCGGTCA 60.051 61.111 0.00 0.00 40.32 4.02
479 571 2.049063 GTCGCTCGGTCAGTTGCT 60.049 61.111 0.00 0.00 0.00 3.91
513 606 3.378339 GCATATGCAAAGAATCCAGCAC 58.622 45.455 22.84 0.00 40.14 4.40
515 608 0.813184 ATGCAAAGAATCCAGCACCG 59.187 50.000 0.00 0.00 40.14 4.94
517 610 1.865788 GCAAAGAATCCAGCACCGCA 61.866 55.000 0.00 0.00 0.00 5.69
518 619 0.109597 CAAAGAATCCAGCACCGCAC 60.110 55.000 0.00 0.00 0.00 5.34
523 624 4.961511 TCCAGCACCGCACGACAC 62.962 66.667 0.00 0.00 0.00 3.67
533 634 1.221466 CGCACGACACCACTGATGTT 61.221 55.000 0.00 0.00 0.00 2.71
543 644 5.845985 CACCACTGATGTTAACAGTAGTG 57.154 43.478 29.83 29.83 45.36 2.74
545 646 4.894784 CCACTGATGTTAACAGTAGTGGT 58.105 43.478 36.81 20.51 46.98 4.16
546 647 6.032956 CCACTGATGTTAACAGTAGTGGTA 57.967 41.667 36.81 10.93 46.98 3.25
547 648 6.100004 CCACTGATGTTAACAGTAGTGGTAG 58.900 44.000 36.81 24.85 46.98 3.18
549 650 5.245301 ACTGATGTTAACAGTAGTGGTAGCA 59.755 40.000 20.47 13.73 45.10 3.49
550 651 6.104146 TGATGTTAACAGTAGTGGTAGCAA 57.896 37.500 15.11 0.00 40.11 3.91
551 652 5.929992 TGATGTTAACAGTAGTGGTAGCAAC 59.070 40.000 15.11 13.08 40.11 4.17
552 653 4.634199 TGTTAACAGTAGTGGTAGCAACC 58.366 43.478 9.49 0.00 46.98 3.77
553 654 4.345837 TGTTAACAGTAGTGGTAGCAACCT 59.654 41.667 9.49 0.00 46.91 3.50
554 655 5.539574 TGTTAACAGTAGTGGTAGCAACCTA 59.460 40.000 9.49 0.00 46.91 3.08
555 656 6.211986 TGTTAACAGTAGTGGTAGCAACCTAT 59.788 38.462 9.49 0.00 46.91 2.57
566 667 6.267014 GTGGTAGCAACCTATACTATTGGAGA 59.733 42.308 0.00 0.00 46.91 3.71
587 688 9.679661 TGGAGATAAATGTAGCTTTATTTCACA 57.320 29.630 10.13 0.00 35.48 3.58
621 722 8.349983 AGTGCTTGATTTTAATTAGTTCACGTT 58.650 29.630 0.00 0.00 0.00 3.99
636 737 7.209471 AGTTCACGTTGCTTTATTTGGAATA 57.791 32.000 0.00 0.00 0.00 1.75
637 738 7.826690 AGTTCACGTTGCTTTATTTGGAATAT 58.173 30.769 0.00 0.00 0.00 1.28
638 739 7.754924 AGTTCACGTTGCTTTATTTGGAATATG 59.245 33.333 0.00 0.00 0.00 1.78
639 740 6.033341 TCACGTTGCTTTATTTGGAATATGC 58.967 36.000 0.00 0.00 0.00 3.14
640 741 5.034152 ACGTTGCTTTATTTGGAATATGCG 58.966 37.500 0.00 0.00 0.00 4.73
641 742 5.034152 CGTTGCTTTATTTGGAATATGCGT 58.966 37.500 0.00 0.00 0.00 5.24
642 743 5.052436 CGTTGCTTTATTTGGAATATGCGTG 60.052 40.000 0.00 0.00 0.00 5.34
645 746 4.676924 GCTTTATTTGGAATATGCGTGCTC 59.323 41.667 0.00 0.00 0.00 4.26
696 817 5.211454 TCGTTCTTTCACGTACGTATTCAA 58.789 37.500 22.34 8.75 41.16 2.69
754 897 7.283354 TCAAACTATACATTGACCACAAACACA 59.717 33.333 0.00 0.00 39.54 3.72
761 904 2.028130 TGACCACAAACACAATCCACC 58.972 47.619 0.00 0.00 0.00 4.61
762 905 2.306847 GACCACAAACACAATCCACCT 58.693 47.619 0.00 0.00 0.00 4.00
765 908 2.958355 CCACAAACACAATCCACCTTCT 59.042 45.455 0.00 0.00 0.00 2.85
775 918 7.177878 ACACAATCCACCTTCTATTCTTCAAT 58.822 34.615 0.00 0.00 0.00 2.57
776 919 7.337942 ACACAATCCACCTTCTATTCTTCAATC 59.662 37.037 0.00 0.00 0.00 2.67
777 920 7.337689 CACAATCCACCTTCTATTCTTCAATCA 59.662 37.037 0.00 0.00 0.00 2.57
778 921 8.057623 ACAATCCACCTTCTATTCTTCAATCAT 58.942 33.333 0.00 0.00 0.00 2.45
781 924 5.591472 CCACCTTCTATTCTTCAATCATGCA 59.409 40.000 0.00 0.00 0.00 3.96
782 925 6.459298 CCACCTTCTATTCTTCAATCATGCAC 60.459 42.308 0.00 0.00 0.00 4.57
783 926 6.318144 CACCTTCTATTCTTCAATCATGCACT 59.682 38.462 0.00 0.00 0.00 4.40
784 927 6.318144 ACCTTCTATTCTTCAATCATGCACTG 59.682 38.462 0.00 0.00 0.00 3.66
785 928 6.318144 CCTTCTATTCTTCAATCATGCACTGT 59.682 38.462 0.00 0.00 0.00 3.55
789 932 5.970317 TTCTTCAATCATGCACTGTTCAT 57.030 34.783 0.00 0.00 0.00 2.57
790 933 5.970317 TCTTCAATCATGCACTGTTCATT 57.030 34.783 0.00 0.00 0.00 2.57
792 935 6.751157 TCTTCAATCATGCACTGTTCATTTT 58.249 32.000 0.00 0.00 0.00 1.82
793 936 7.211573 TCTTCAATCATGCACTGTTCATTTTT 58.788 30.769 0.00 0.00 0.00 1.94
794 937 7.383029 TCTTCAATCATGCACTGTTCATTTTTC 59.617 33.333 0.00 0.00 0.00 2.29
797 940 6.774354 ATCATGCACTGTTCATTTTTCAAC 57.226 33.333 0.00 0.00 0.00 3.18
799 942 5.749588 TCATGCACTGTTCATTTTTCAACAG 59.250 36.000 9.70 9.70 0.00 3.16
800 943 4.431809 TGCACTGTTCATTTTTCAACAGG 58.568 39.130 14.55 6.41 0.00 4.00
801 944 4.159321 TGCACTGTTCATTTTTCAACAGGA 59.841 37.500 14.55 0.00 0.00 3.86
803 946 5.580297 GCACTGTTCATTTTTCAACAGGAAA 59.420 36.000 14.55 0.00 43.59 3.13
804 947 6.455513 GCACTGTTCATTTTTCAACAGGAAAC 60.456 38.462 14.55 0.27 44.89 2.78
806 949 4.564769 TGTTCATTTTTCAACAGGAAACGC 59.435 37.500 0.00 0.00 44.89 4.84
808 951 2.588027 TTTTTCAACAGGAAACGCCC 57.412 45.000 0.00 0.00 44.89 6.13
809 952 1.475403 TTTTCAACAGGAAACGCCCA 58.525 45.000 0.00 0.00 44.89 5.36
813 956 0.958091 CAACAGGAAACGCCCATCAA 59.042 50.000 0.00 0.00 37.37 2.57
814 957 1.339610 CAACAGGAAACGCCCATCAAA 59.660 47.619 0.00 0.00 37.37 2.69
821 1800 3.694566 GGAAACGCCCATCAAACTATTCT 59.305 43.478 0.00 0.00 0.00 2.40
865 1852 4.178545 TGCTACACCTACGTTAACCTTC 57.821 45.455 0.00 0.00 0.00 3.46
867 1854 3.194329 GCTACACCTACGTTAACCTTCCT 59.806 47.826 0.00 0.00 0.00 3.36
872 1859 4.931601 CACCTACGTTAACCTTCCTTTACC 59.068 45.833 0.00 0.00 0.00 2.85
876 1896 3.321968 ACGTTAACCTTCCTTTACCGACT 59.678 43.478 0.00 0.00 0.00 4.18
883 1903 5.872963 ACCTTCCTTTACCGACTAAACATT 58.127 37.500 0.00 0.00 0.00 2.71
889 1909 6.993902 TCCTTTACCGACTAAACATTGTTTCT 59.006 34.615 17.64 5.21 0.00 2.52
965 1990 8.464770 TTTTATCATAAGCACAACATCTTTGC 57.535 30.769 0.00 0.00 36.45 3.68
971 1996 1.067516 GCACAACATCTTTGCAGTGGT 59.932 47.619 0.00 0.00 36.22 4.16
1092 2132 0.333652 TCTCATGGGGTCACTCCGTA 59.666 55.000 0.00 0.00 37.00 4.02
1104 2144 3.195591 CTCCGTATCCCGCGACCTG 62.196 68.421 8.23 0.00 34.38 4.00
1110 2150 1.046472 TATCCCGCGACCTGGTGAAT 61.046 55.000 8.23 0.00 0.00 2.57
1125 2165 1.152881 GAATTGGGCTGCCCTCGAT 60.153 57.895 35.80 23.69 45.70 3.59
1129 2169 3.161450 GGGCTGCCCTCGATACCA 61.161 66.667 30.42 0.00 41.34 3.25
1143 2183 0.691078 ATACCATGCTCGACCCCACT 60.691 55.000 0.00 0.00 0.00 4.00
1197 2237 3.728373 GCCACAATCCTCCCCGGT 61.728 66.667 0.00 0.00 0.00 5.28
1283 2323 0.178961 GCTTTCCCCAAGAACCCTGT 60.179 55.000 0.00 0.00 33.80 4.00
1326 2366 2.040544 CAAGCCTGCCTACAACCCG 61.041 63.158 0.00 0.00 0.00 5.28
1327 2367 2.221299 AAGCCTGCCTACAACCCGA 61.221 57.895 0.00 0.00 0.00 5.14
1334 2374 1.067974 TGCCTACAACCCGATCATACG 59.932 52.381 0.00 0.00 0.00 3.06
1362 2402 2.922950 CGACGTCCCCGGAGACAAA 61.923 63.158 17.02 0.00 36.52 2.83
1367 2407 1.609580 CGTCCCCGGAGACAAATTTCA 60.610 52.381 17.02 0.00 36.52 2.69
1461 2504 3.818787 GGCATTGCCTCCACGCTG 61.819 66.667 20.66 0.00 46.69 5.18
1523 2566 2.819019 CCTTGCCATTGTACATGTCACA 59.181 45.455 0.00 2.71 0.00 3.58
1525 2568 2.856222 TGCCATTGTACATGTCACACA 58.144 42.857 0.00 0.00 0.00 3.72
1530 2573 2.908688 TGTACATGTCACACACTGCT 57.091 45.000 0.00 0.00 0.00 4.24
1532 2575 2.102252 TGTACATGTCACACACTGCTGA 59.898 45.455 0.00 0.00 0.00 4.26
1548 2591 2.125106 GACATGGTCGAGTGCCCC 60.125 66.667 0.00 0.00 0.00 5.80
1624 2667 1.635663 CGGAATGGCGAGTGGTGTTC 61.636 60.000 0.00 0.00 0.00 3.18
1653 2696 1.665916 GCTGAAGCTGAGCGTGACA 60.666 57.895 0.00 0.00 38.21 3.58
1700 2746 2.768492 GGAGGTACGACGATGCGGT 61.768 63.158 0.00 0.00 35.12 5.68
1720 2766 1.070786 GACACCTTTGTGCCGGAGA 59.929 57.895 5.05 0.00 46.86 3.71
1855 2901 0.179009 ATGGGCCAATGAGTCGGATG 60.179 55.000 11.89 0.00 0.00 3.51
1857 2903 1.224592 GGCCAATGAGTCGGATGGT 59.775 57.895 0.00 0.00 35.34 3.55
1900 2946 2.032071 GGTCCGGTGTTCAGGTGG 59.968 66.667 0.00 0.00 0.00 4.61
1914 2974 1.997874 GGTGGGCATCCTCCAGTCT 60.998 63.158 0.00 0.00 44.15 3.24
1948 3017 8.667076 TCAACTAACTGATCATCCACATTATG 57.333 34.615 0.00 0.00 0.00 1.90
1992 3072 0.685660 AGACGGTTCCAAGGAAGGTC 59.314 55.000 18.35 18.35 38.22 3.85
1998 3078 1.149101 TTCCAAGGAAGGTCTGGCTT 58.851 50.000 0.00 0.00 0.00 4.35
2061 3160 5.277442 GGAGATCGAGACGTTAAGGAGTAAG 60.277 48.000 1.43 0.00 0.00 2.34
2062 3161 4.575645 AGATCGAGACGTTAAGGAGTAAGG 59.424 45.833 1.43 0.00 34.40 2.69
2071 3170 2.903375 AAGGAGTAAGGGAGTCGTCT 57.097 50.000 0.00 0.00 0.00 4.18
2073 3172 1.355043 AGGAGTAAGGGAGTCGTCTGT 59.645 52.381 0.00 0.00 0.00 3.41
2075 3174 2.094649 GGAGTAAGGGAGTCGTCTGTTG 60.095 54.545 0.00 0.00 0.00 3.33
2081 3180 1.579932 GAGTCGTCTGTTGGCTCGA 59.420 57.895 0.00 0.00 0.00 4.04
2085 3184 1.664649 CGTCTGTTGGCTCGAAGCA 60.665 57.895 8.71 0.00 44.75 3.91
2188 3293 1.258445 GGAAGAGGCCGAGACCTTCA 61.258 60.000 18.96 0.00 41.32 3.02
2193 3298 2.347490 GCCGAGACCTTCAAGCCA 59.653 61.111 0.00 0.00 0.00 4.75
2306 3411 2.501222 CGACTTGCGCGAGTACGT 60.501 61.111 29.86 8.77 41.98 3.57
2323 3428 3.213249 ACGTACATCCGTCTTCTTCAC 57.787 47.619 0.00 0.00 35.95 3.18
2357 3462 7.986085 ATACAATCAGAAGTACAAAGTGCTT 57.014 32.000 0.09 0.09 40.86 3.91
2395 3504 7.062749 TCACAAGGTATAGAACACAACTTCT 57.937 36.000 0.00 0.00 34.72 2.85
2434 3544 2.426738 TCCCACTGTTGCAAAGTCAAAG 59.573 45.455 0.00 0.00 0.00 2.77
2548 3666 1.069823 GACATGGACATCGAGGAGCAT 59.930 52.381 3.06 0.00 0.00 3.79
2554 3672 2.887783 GGACATCGAGGAGCATAAGAGA 59.112 50.000 3.06 0.00 0.00 3.10
2602 3727 3.559238 TTCTTCGATCCTTTGCTTTGC 57.441 42.857 0.00 0.00 0.00 3.68
2655 3781 6.716934 TGTGTGACTTACTTCTCTTCTTCT 57.283 37.500 0.00 0.00 0.00 2.85
2698 3824 0.896226 GGTAGAGTGTTTCGGAGGCT 59.104 55.000 0.00 0.00 0.00 4.58
2699 3825 1.275573 GGTAGAGTGTTTCGGAGGCTT 59.724 52.381 0.00 0.00 0.00 4.35
2703 3829 1.072505 GTGTTTCGGAGGCTTGGGA 59.927 57.895 0.00 0.00 0.00 4.37
2805 3931 2.035449 CGGTGTTGTGAAGGTGTCTAGA 59.965 50.000 0.00 0.00 0.00 2.43
2829 3955 3.455469 GCATGGAGGCTGGCAACC 61.455 66.667 3.38 0.00 0.00 3.77
2959 4085 3.436470 GCCAGGCCTTATATTCCCTTGAA 60.436 47.826 0.00 0.00 34.33 2.69
2964 4090 7.123247 CCAGGCCTTATATTCCCTTGAATTATG 59.877 40.741 0.00 0.00 41.44 1.90
3033 4167 9.730705 ACTGGGATACAAGATATCATGTATTTG 57.269 33.333 26.20 19.54 39.82 2.32
3049 4183 7.875554 TCATGTATTTGTGTAACTTCTACTGCA 59.124 33.333 0.00 0.00 38.04 4.41
3158 4292 6.441088 AACTAAAGAGGACCAGATGTTCTT 57.559 37.500 0.00 0.00 30.74 2.52
3225 4360 8.887036 AAGCTTTTGTTATTTTTAAGGTGGAG 57.113 30.769 0.00 0.00 0.00 3.86
3244 4379 0.175989 GCCTAAGCTTAGCAGGACGT 59.824 55.000 25.38 0.00 35.50 4.34
3255 4665 1.555075 AGCAGGACGTGTTATCCACAT 59.445 47.619 0.00 0.00 44.78 3.21
3256 4666 2.764010 AGCAGGACGTGTTATCCACATA 59.236 45.455 0.00 0.00 44.78 2.29
3260 4670 5.356426 CAGGACGTGTTATCCACATATCAA 58.644 41.667 0.00 0.00 44.78 2.57
3268 4678 7.865889 CGTGTTATCCACATATCAAGCTACTTA 59.134 37.037 0.00 0.00 44.78 2.24
3269 4679 8.979574 GTGTTATCCACATATCAAGCTACTTAC 58.020 37.037 0.00 0.00 43.92 2.34
3270 4680 8.924303 TGTTATCCACATATCAAGCTACTTACT 58.076 33.333 0.00 0.00 0.00 2.24
3275 4685 9.314133 TCCACATATCAAGCTACTTACTATGAT 57.686 33.333 11.97 0.00 0.00 2.45
3326 4736 2.169769 AGTTTCCCGTCTCAACTTGTCA 59.830 45.455 0.00 0.00 0.00 3.58
3333 4743 3.005472 CCGTCTCAACTTGTCAGTAGGAA 59.995 47.826 0.00 0.00 30.68 3.36
3352 4762 0.036732 ACGTTGCCATCACTGGACAT 59.963 50.000 0.00 0.00 46.37 3.06
3354 4764 1.135603 CGTTGCCATCACTGGACATTG 60.136 52.381 0.00 0.00 46.37 2.82
3359 4769 2.092968 GCCATCACTGGACATTGGTAGA 60.093 50.000 0.00 0.00 46.37 2.59
3364 4774 3.260884 TCACTGGACATTGGTAGAGGAAC 59.739 47.826 0.00 0.00 0.00 3.62
3371 4781 4.679662 ACATTGGTAGAGGAACGAATACG 58.320 43.478 0.00 0.00 45.75 3.06
3390 4800 2.170607 ACGTCCTAAATGACCCCATGAG 59.829 50.000 0.00 0.00 32.36 2.90
3485 4895 3.157087 ACGACCATTGCCTTTTGATCTT 58.843 40.909 0.00 0.00 0.00 2.40
3487 4897 3.922240 CGACCATTGCCTTTTGATCTTTG 59.078 43.478 0.00 0.00 0.00 2.77
3500 4910 5.475273 TTGATCTTTGCAAATCGCTCTAG 57.525 39.130 13.23 0.00 43.06 2.43
3501 4911 4.758688 TGATCTTTGCAAATCGCTCTAGA 58.241 39.130 13.23 3.89 43.06 2.43
3503 4913 5.819379 TGATCTTTGCAAATCGCTCTAGATT 59.181 36.000 13.23 0.00 42.13 2.40
3505 4915 6.500684 TCTTTGCAAATCGCTCTAGATTTT 57.499 33.333 13.23 0.00 45.45 1.82
3506 4916 6.913170 TCTTTGCAAATCGCTCTAGATTTTT 58.087 32.000 13.23 0.00 45.45 1.94
3545 4955 8.682128 TCAACGCCTCAATTATTTAATCAAAC 57.318 30.769 0.00 0.00 0.00 2.93
3546 4956 7.483375 TCAACGCCTCAATTATTTAATCAAACG 59.517 33.333 0.00 0.00 0.00 3.60
3547 4957 6.262601 ACGCCTCAATTATTTAATCAAACGG 58.737 36.000 0.00 0.00 0.00 4.44
3548 4958 6.094325 ACGCCTCAATTATTTAATCAAACGGA 59.906 34.615 0.00 0.00 0.00 4.69
3549 4959 6.970043 CGCCTCAATTATTTAATCAAACGGAA 59.030 34.615 0.00 0.00 0.00 4.30
3550 4960 7.486551 CGCCTCAATTATTTAATCAAACGGAAA 59.513 33.333 0.00 0.00 0.00 3.13
3551 4961 9.313118 GCCTCAATTATTTAATCAAACGGAAAT 57.687 29.630 0.00 0.00 0.00 2.17
3559 4969 6.914760 TTAATCAAACGGAAATGTTAACGC 57.085 33.333 0.26 0.00 0.00 4.84
3560 4970 3.270962 TCAAACGGAAATGTTAACGCC 57.729 42.857 0.26 0.00 0.00 5.68
3561 4971 2.030981 TCAAACGGAAATGTTAACGCCC 60.031 45.455 0.26 0.00 0.00 6.13
3562 4972 1.606903 AACGGAAATGTTAACGCCCA 58.393 45.000 0.26 0.00 0.00 5.36
3563 4973 0.876399 ACGGAAATGTTAACGCCCAC 59.124 50.000 0.26 0.00 0.00 4.61
3564 4974 0.875728 CGGAAATGTTAACGCCCACA 59.124 50.000 0.26 0.00 0.00 4.17
3565 4975 1.400500 CGGAAATGTTAACGCCCACAC 60.400 52.381 0.26 0.00 0.00 3.82
3566 4976 1.400500 GGAAATGTTAACGCCCACACG 60.400 52.381 0.26 0.00 39.50 4.49
3579 4989 2.707039 ACACGTGTGAGCGTTTGC 59.293 55.556 22.71 0.00 43.83 3.68
3580 4990 2.103647 ACACGTGTGAGCGTTTGCA 61.104 52.632 22.71 0.00 46.23 4.08
3581 4991 1.279539 CACGTGTGAGCGTTTGCAT 59.720 52.632 7.58 0.00 46.23 3.96
3582 4992 0.722469 CACGTGTGAGCGTTTGCATC 60.722 55.000 7.58 0.00 46.23 3.91
3583 4993 0.880278 ACGTGTGAGCGTTTGCATCT 60.880 50.000 0.00 0.00 46.23 2.90
3584 4994 0.179240 CGTGTGAGCGTTTGCATCTC 60.179 55.000 0.00 0.00 46.23 2.75
3585 4995 0.179240 GTGTGAGCGTTTGCATCTCG 60.179 55.000 0.00 0.00 46.23 4.04
3589 4999 3.430862 GCGTTTGCATCTCGCCCA 61.431 61.111 16.09 0.00 43.41 5.36
3590 5000 2.480555 CGTTTGCATCTCGCCCAC 59.519 61.111 0.00 0.00 41.33 4.61
3591 5001 2.324330 CGTTTGCATCTCGCCCACA 61.324 57.895 0.00 0.00 41.33 4.17
3592 5002 1.210155 GTTTGCATCTCGCCCACAC 59.790 57.895 0.00 0.00 41.33 3.82
3593 5003 2.324330 TTTGCATCTCGCCCACACG 61.324 57.895 0.00 0.00 41.33 4.49
3613 5023 3.204505 GTGGATTCACGTCCGTTCA 57.795 52.632 0.00 0.00 41.35 3.18
3614 5024 1.722011 GTGGATTCACGTCCGTTCAT 58.278 50.000 0.00 0.00 41.35 2.57
3615 5025 1.393539 GTGGATTCACGTCCGTTCATG 59.606 52.381 0.00 0.00 41.35 3.07
3616 5026 1.273886 TGGATTCACGTCCGTTCATGA 59.726 47.619 0.00 0.00 41.35 3.07
3617 5027 1.927174 GGATTCACGTCCGTTCATGAG 59.073 52.381 0.00 0.00 0.00 2.90
3618 5028 1.324736 GATTCACGTCCGTTCATGAGC 59.675 52.381 0.00 0.00 0.00 4.26
3619 5029 1.006825 TTCACGTCCGTTCATGAGCG 61.007 55.000 23.26 23.26 34.75 5.03
3620 5030 2.809601 ACGTCCGTTCATGAGCGC 60.810 61.111 24.56 12.17 33.61 5.92
3621 5031 2.809174 CGTCCGTTCATGAGCGCA 60.809 61.111 24.56 9.17 33.61 6.09
3622 5032 2.778679 GTCCGTTCATGAGCGCAC 59.221 61.111 24.56 17.86 33.61 5.34
3623 5033 2.809174 TCCGTTCATGAGCGCACG 60.809 61.111 24.56 17.11 33.61 5.34
3624 5034 2.809174 CCGTTCATGAGCGCACGA 60.809 61.111 24.56 0.76 34.49 4.35
3625 5035 2.379634 CCGTTCATGAGCGCACGAA 61.380 57.895 24.56 6.95 34.49 3.85
3626 5036 1.695893 CCGTTCATGAGCGCACGAAT 61.696 55.000 24.56 0.00 34.49 3.34
3627 5037 0.314578 CGTTCATGAGCGCACGAATC 60.315 55.000 19.05 0.00 34.49 2.52
3628 5038 1.002366 GTTCATGAGCGCACGAATCT 58.998 50.000 11.47 0.00 28.12 2.40
3629 5039 1.394917 GTTCATGAGCGCACGAATCTT 59.605 47.619 11.47 0.00 28.12 2.40
3630 5040 1.001624 TCATGAGCGCACGAATCTTG 58.998 50.000 11.47 6.66 0.00 3.02
3631 5041 0.027194 CATGAGCGCACGAATCTTGG 59.973 55.000 11.47 0.00 0.00 3.61
3632 5042 1.709147 ATGAGCGCACGAATCTTGGC 61.709 55.000 11.47 0.00 0.00 4.52
3633 5043 2.358615 AGCGCACGAATCTTGGCA 60.359 55.556 11.47 0.00 0.00 4.92
3634 5044 1.709147 GAGCGCACGAATCTTGGCAT 61.709 55.000 11.47 0.00 0.00 4.40
3635 5045 1.584483 GCGCACGAATCTTGGCATG 60.584 57.895 0.30 0.00 0.00 4.06
3636 5046 1.796151 CGCACGAATCTTGGCATGT 59.204 52.632 0.00 0.00 0.00 3.21
3637 5047 0.168788 CGCACGAATCTTGGCATGTT 59.831 50.000 0.00 0.00 0.00 2.71
3638 5048 1.401409 CGCACGAATCTTGGCATGTTT 60.401 47.619 0.00 0.00 0.00 2.83
3639 5049 2.253603 GCACGAATCTTGGCATGTTTC 58.746 47.619 11.97 11.97 0.00 2.78
3640 5050 2.095059 GCACGAATCTTGGCATGTTTCT 60.095 45.455 17.10 6.52 0.00 2.52
3641 5051 3.126858 GCACGAATCTTGGCATGTTTCTA 59.873 43.478 17.10 0.00 0.00 2.10
3642 5052 4.728882 GCACGAATCTTGGCATGTTTCTAG 60.729 45.833 17.10 12.11 0.00 2.43
3643 5053 4.393062 CACGAATCTTGGCATGTTTCTAGT 59.607 41.667 17.10 9.33 0.00 2.57
3644 5054 4.393062 ACGAATCTTGGCATGTTTCTAGTG 59.607 41.667 17.10 8.13 0.00 2.74
3645 5055 4.666237 GAATCTTGGCATGTTTCTAGTGC 58.334 43.478 13.85 0.00 38.12 4.40
3649 5059 3.975992 GCATGTTTCTAGTGCCACG 57.024 52.632 0.00 0.00 32.88 4.94
3650 5060 1.156736 GCATGTTTCTAGTGCCACGT 58.843 50.000 0.00 0.00 32.88 4.49
3651 5061 2.343101 GCATGTTTCTAGTGCCACGTA 58.657 47.619 0.00 0.00 32.88 3.57
3652 5062 2.348666 GCATGTTTCTAGTGCCACGTAG 59.651 50.000 0.00 0.00 32.88 3.51
3653 5063 2.736144 TGTTTCTAGTGCCACGTAGG 57.264 50.000 0.00 0.00 41.84 3.18
3654 5064 2.241160 TGTTTCTAGTGCCACGTAGGA 58.759 47.619 8.04 0.00 41.22 2.94
3655 5065 2.029649 TGTTTCTAGTGCCACGTAGGAC 60.030 50.000 0.00 0.00 41.22 3.85
3656 5066 2.211250 TTCTAGTGCCACGTAGGACT 57.789 50.000 13.17 13.17 41.22 3.85
3657 5067 1.460504 TCTAGTGCCACGTAGGACTG 58.539 55.000 17.70 8.26 41.22 3.51
3658 5068 0.456221 CTAGTGCCACGTAGGACTGG 59.544 60.000 17.70 11.34 41.22 4.00
3669 5079 2.281761 GGACTGGCCTGGTGTGTG 60.282 66.667 14.82 0.00 0.00 3.82
3670 5080 2.281761 GACTGGCCTGGTGTGTGG 60.282 66.667 14.82 0.00 0.00 4.17
3671 5081 3.850098 GACTGGCCTGGTGTGTGGG 62.850 68.421 14.82 0.00 0.00 4.61
3676 5086 2.978010 CCTGGTGTGTGGGCGTTC 60.978 66.667 0.00 0.00 0.00 3.95
3677 5087 2.203139 CTGGTGTGTGGGCGTTCA 60.203 61.111 0.00 0.00 0.00 3.18
3678 5088 2.515057 TGGTGTGTGGGCGTTCAC 60.515 61.111 3.83 3.83 38.09 3.18
3679 5089 3.284449 GGTGTGTGGGCGTTCACC 61.284 66.667 7.58 0.00 42.40 4.02
3680 5090 2.203153 GTGTGTGGGCGTTCACCT 60.203 61.111 7.58 0.00 36.87 4.00
3681 5091 2.203139 TGTGTGGGCGTTCACCTG 60.203 61.111 7.58 0.00 36.87 4.00
3682 5092 2.978010 GTGTGGGCGTTCACCTGG 60.978 66.667 7.58 0.00 36.87 4.45
3683 5093 3.484806 TGTGGGCGTTCACCTGGT 61.485 61.111 0.00 0.00 36.87 4.00
3684 5094 2.668550 GTGGGCGTTCACCTGGTC 60.669 66.667 0.00 0.00 0.00 4.02
3685 5095 4.308458 TGGGCGTTCACCTGGTCG 62.308 66.667 0.00 0.00 0.00 4.79
3689 5099 4.308458 CGTTCACCTGGTCGCCCA 62.308 66.667 0.00 0.00 38.87 5.36
3690 5100 2.668550 GTTCACCTGGTCGCCCAC 60.669 66.667 0.00 0.00 35.17 4.61
3691 5101 3.164977 TTCACCTGGTCGCCCACA 61.165 61.111 0.00 0.00 35.17 4.17
3692 5102 2.525124 TTCACCTGGTCGCCCACAT 61.525 57.895 0.00 0.00 35.17 3.21
3693 5103 2.746412 TTCACCTGGTCGCCCACATG 62.746 60.000 0.00 0.00 35.17 3.21
3694 5104 4.033776 ACCTGGTCGCCCACATGG 62.034 66.667 0.00 0.00 35.17 3.66
3703 5113 2.961768 CCCACATGGCCGTTTCAC 59.038 61.111 0.00 0.00 0.00 3.18
3704 5114 2.635443 CCCACATGGCCGTTTCACC 61.635 63.158 0.00 0.00 0.00 4.02
3705 5115 1.900981 CCACATGGCCGTTTCACCA 60.901 57.895 0.00 0.00 41.06 4.17
3706 5116 1.285641 CACATGGCCGTTTCACCAC 59.714 57.895 0.00 0.00 39.19 4.16
3707 5117 1.152860 ACATGGCCGTTTCACCACA 60.153 52.632 0.00 0.00 39.19 4.17
3708 5118 1.172180 ACATGGCCGTTTCACCACAG 61.172 55.000 0.00 0.00 39.19 3.66
3709 5119 0.888736 CATGGCCGTTTCACCACAGA 60.889 55.000 0.00 0.00 39.19 3.41
3710 5120 0.606401 ATGGCCGTTTCACCACAGAG 60.606 55.000 0.00 0.00 39.19 3.35
3711 5121 1.966451 GGCCGTTTCACCACAGAGG 60.966 63.158 0.00 0.00 45.67 3.69
3712 5122 1.070786 GCCGTTTCACCACAGAGGA 59.929 57.895 0.00 0.00 41.22 3.71
3713 5123 0.951040 GCCGTTTCACCACAGAGGAG 60.951 60.000 0.00 0.00 41.22 3.69
3714 5124 0.320771 CCGTTTCACCACAGAGGAGG 60.321 60.000 0.00 0.00 41.22 4.30
3715 5125 0.320771 CGTTTCACCACAGAGGAGGG 60.321 60.000 0.00 0.00 41.22 4.30
3716 5126 0.036875 GTTTCACCACAGAGGAGGGG 59.963 60.000 0.00 0.00 41.22 4.79
3717 5127 0.401395 TTTCACCACAGAGGAGGGGT 60.401 55.000 0.00 0.00 41.22 4.95
3718 5128 0.401395 TTCACCACAGAGGAGGGGTT 60.401 55.000 0.00 0.00 41.22 4.11
3719 5129 1.127567 TCACCACAGAGGAGGGGTTG 61.128 60.000 0.00 0.00 41.22 3.77
3720 5130 1.847968 ACCACAGAGGAGGGGTTGG 60.848 63.158 0.00 0.00 41.22 3.77
3721 5131 1.847968 CCACAGAGGAGGGGTTGGT 60.848 63.158 0.00 0.00 41.22 3.67
3722 5132 1.376466 CACAGAGGAGGGGTTGGTG 59.624 63.158 0.00 0.00 0.00 4.17
3723 5133 1.073706 ACAGAGGAGGGGTTGGTGT 60.074 57.895 0.00 0.00 0.00 4.16
3724 5134 1.376466 CAGAGGAGGGGTTGGTGTG 59.624 63.158 0.00 0.00 0.00 3.82
3725 5135 1.073706 AGAGGAGGGGTTGGTGTGT 60.074 57.895 0.00 0.00 0.00 3.72
3726 5136 1.073199 GAGGAGGGGTTGGTGTGTG 59.927 63.158 0.00 0.00 0.00 3.82
3727 5137 2.115266 GGAGGGGTTGGTGTGTGG 59.885 66.667 0.00 0.00 0.00 4.17
3728 5138 2.115266 GAGGGGTTGGTGTGTGGG 59.885 66.667 0.00 0.00 0.00 4.61
3729 5139 4.218686 AGGGGTTGGTGTGTGGGC 62.219 66.667 0.00 0.00 0.00 5.36
3731 5141 4.887190 GGGTTGGTGTGTGGGCGT 62.887 66.667 0.00 0.00 0.00 5.68
3732 5142 2.831284 GGTTGGTGTGTGGGCGTT 60.831 61.111 0.00 0.00 0.00 4.84
3733 5143 2.719354 GTTGGTGTGTGGGCGTTC 59.281 61.111 0.00 0.00 0.00 3.95
3734 5144 2.115911 GTTGGTGTGTGGGCGTTCA 61.116 57.895 0.00 0.00 0.00 3.18
3735 5145 1.821759 TTGGTGTGTGGGCGTTCAG 60.822 57.895 0.00 0.00 0.00 3.02
3746 5156 2.664851 CGTTCAGCAGTTCGCCCA 60.665 61.111 0.00 0.00 44.04 5.36
3747 5157 2.946762 GTTCAGCAGTTCGCCCAC 59.053 61.111 0.00 0.00 44.04 4.61
3748 5158 1.891919 GTTCAGCAGTTCGCCCACA 60.892 57.895 0.00 0.00 44.04 4.17
3749 5159 1.073025 TTCAGCAGTTCGCCCACAT 59.927 52.632 0.00 0.00 44.04 3.21
3750 5160 1.236616 TTCAGCAGTTCGCCCACATG 61.237 55.000 0.00 0.00 44.04 3.21
3751 5161 3.058160 AGCAGTTCGCCCACATGC 61.058 61.111 0.00 0.00 44.04 4.06
3752 5162 4.120331 GCAGTTCGCCCACATGCC 62.120 66.667 0.00 0.00 32.94 4.40
3753 5163 2.672651 CAGTTCGCCCACATGCCA 60.673 61.111 0.00 0.00 0.00 4.92
3754 5164 2.672996 AGTTCGCCCACATGCCAC 60.673 61.111 0.00 0.00 0.00 5.01
3755 5165 2.672996 GTTCGCCCACATGCCACT 60.673 61.111 0.00 0.00 0.00 4.00
3756 5166 2.115052 TTCGCCCACATGCCACTT 59.885 55.556 0.00 0.00 0.00 3.16
3757 5167 1.530419 TTCGCCCACATGCCACTTT 60.530 52.632 0.00 0.00 0.00 2.66
3758 5168 1.804396 TTCGCCCACATGCCACTTTG 61.804 55.000 0.00 0.00 0.00 2.77
3759 5169 2.047939 GCCCACATGCCACTTTGC 60.048 61.111 0.00 0.00 0.00 3.68
3760 5170 2.870119 GCCCACATGCCACTTTGCA 61.870 57.895 0.00 0.00 46.94 4.08
3761 5171 1.005867 CCCACATGCCACTTTGCAC 60.006 57.895 0.00 0.00 45.48 4.57
3762 5172 1.372004 CCACATGCCACTTTGCACG 60.372 57.895 0.00 0.00 45.48 5.34
3763 5173 2.017783 CACATGCCACTTTGCACGC 61.018 57.895 0.00 0.00 45.48 5.34
3764 5174 2.335729 CATGCCACTTTGCACGCA 59.664 55.556 0.00 0.00 45.48 5.24
3765 5175 2.017783 CATGCCACTTTGCACGCAC 61.018 57.895 0.00 0.00 45.48 5.34
3766 5176 2.488403 ATGCCACTTTGCACGCACA 61.488 52.632 0.00 0.00 45.48 4.57
3767 5177 2.655044 GCCACTTTGCACGCACAC 60.655 61.111 0.00 0.00 0.00 3.82
3768 5178 2.797330 CCACTTTGCACGCACACA 59.203 55.556 0.00 0.00 0.00 3.72
3769 5179 1.586042 CCACTTTGCACGCACACAC 60.586 57.895 0.00 0.00 0.00 3.82
3770 5180 1.136356 CACTTTGCACGCACACACA 59.864 52.632 0.00 0.00 0.00 3.72
3771 5181 0.455802 CACTTTGCACGCACACACAA 60.456 50.000 0.00 0.00 0.00 3.33
3772 5182 0.179166 ACTTTGCACGCACACACAAG 60.179 50.000 0.00 0.00 0.00 3.16
3773 5183 0.866906 CTTTGCACGCACACACAAGG 60.867 55.000 0.00 0.00 0.00 3.61
3774 5184 2.276863 TTTGCACGCACACACAAGGG 62.277 55.000 0.00 0.00 0.00 3.95
3775 5185 4.629115 GCACGCACACACAAGGGC 62.629 66.667 0.00 0.00 0.00 5.19
3776 5186 2.901840 CACGCACACACAAGGGCT 60.902 61.111 0.00 0.00 0.00 5.19
3777 5187 1.596752 CACGCACACACAAGGGCTA 60.597 57.895 0.00 0.00 0.00 3.93
3778 5188 1.301716 ACGCACACACAAGGGCTAG 60.302 57.895 0.00 0.00 0.00 3.42
3779 5189 1.301716 CGCACACACAAGGGCTAGT 60.302 57.895 0.00 0.00 0.00 2.57
3780 5190 1.568612 CGCACACACAAGGGCTAGTG 61.569 60.000 0.00 0.00 41.40 2.74
3785 5195 2.932663 CACAAGGGCTAGTGTGTGG 58.067 57.895 3.62 0.00 40.22 4.17
3786 5196 0.606401 CACAAGGGCTAGTGTGTGGG 60.606 60.000 3.62 0.00 40.22 4.61
3787 5197 1.060163 ACAAGGGCTAGTGTGTGGGT 61.060 55.000 0.00 0.00 0.00 4.51
3788 5198 0.981183 CAAGGGCTAGTGTGTGGGTA 59.019 55.000 0.00 0.00 0.00 3.69
3789 5199 1.559682 CAAGGGCTAGTGTGTGGGTAT 59.440 52.381 0.00 0.00 0.00 2.73
3790 5200 1.966845 AGGGCTAGTGTGTGGGTATT 58.033 50.000 0.00 0.00 0.00 1.89
3791 5201 2.275466 AGGGCTAGTGTGTGGGTATTT 58.725 47.619 0.00 0.00 0.00 1.40
3792 5202 2.026262 AGGGCTAGTGTGTGGGTATTTG 60.026 50.000 0.00 0.00 0.00 2.32
3793 5203 1.743394 GGCTAGTGTGTGGGTATTTGC 59.257 52.381 0.00 0.00 0.00 3.68
3794 5204 1.743394 GCTAGTGTGTGGGTATTTGCC 59.257 52.381 0.00 0.00 0.00 4.52
3795 5205 2.878117 GCTAGTGTGTGGGTATTTGCCA 60.878 50.000 0.00 0.00 0.00 4.92
3796 5206 2.603075 AGTGTGTGGGTATTTGCCAT 57.397 45.000 0.00 0.00 0.00 4.40
3797 5207 2.446435 AGTGTGTGGGTATTTGCCATC 58.554 47.619 0.00 0.00 0.00 3.51
3798 5208 2.041620 AGTGTGTGGGTATTTGCCATCT 59.958 45.455 0.00 0.00 0.00 2.90
3799 5209 2.423538 GTGTGTGGGTATTTGCCATCTC 59.576 50.000 0.00 0.00 0.00 2.75
3800 5210 1.670811 GTGTGGGTATTTGCCATCTCG 59.329 52.381 0.00 0.00 0.00 4.04
3801 5211 0.663153 GTGGGTATTTGCCATCTCGC 59.337 55.000 0.00 0.00 0.00 5.03
3802 5212 0.465460 TGGGTATTTGCCATCTCGCC 60.465 55.000 0.00 0.00 0.00 5.54
3803 5213 1.172812 GGGTATTTGCCATCTCGCCC 61.173 60.000 0.00 0.00 0.00 6.13
3804 5214 0.465460 GGTATTTGCCATCTCGCCCA 60.465 55.000 0.00 0.00 0.00 5.36
3805 5215 0.663153 GTATTTGCCATCTCGCCCAC 59.337 55.000 0.00 0.00 0.00 4.61
3806 5216 0.254462 TATTTGCCATCTCGCCCACA 59.746 50.000 0.00 0.00 0.00 4.17
3807 5217 1.315257 ATTTGCCATCTCGCCCACAC 61.315 55.000 0.00 0.00 0.00 3.82
3808 5218 4.758251 TGCCATCTCGCCCACACG 62.758 66.667 0.00 0.00 0.00 4.49
3819 5229 4.436998 CCACACGCCCGTCTCCTC 62.437 72.222 0.00 0.00 0.00 3.71
3820 5230 3.374402 CACACGCCCGTCTCCTCT 61.374 66.667 0.00 0.00 0.00 3.69
3821 5231 3.063084 ACACGCCCGTCTCCTCTC 61.063 66.667 0.00 0.00 0.00 3.20
3822 5232 3.827898 CACGCCCGTCTCCTCTCC 61.828 72.222 0.00 0.00 0.00 3.71
3825 5235 3.462678 GCCCGTCTCCTCTCCCAC 61.463 72.222 0.00 0.00 0.00 4.61
3826 5236 3.141488 CCCGTCTCCTCTCCCACG 61.141 72.222 0.00 0.00 0.00 4.94
3827 5237 3.827898 CCGTCTCCTCTCCCACGC 61.828 72.222 0.00 0.00 0.00 5.34
3828 5238 3.827898 CGTCTCCTCTCCCACGCC 61.828 72.222 0.00 0.00 0.00 5.68
3829 5239 3.462678 GTCTCCTCTCCCACGCCC 61.463 72.222 0.00 0.00 0.00 6.13
3830 5240 3.992641 TCTCCTCTCCCACGCCCA 61.993 66.667 0.00 0.00 0.00 5.36
3831 5241 3.003173 CTCCTCTCCCACGCCCAA 61.003 66.667 0.00 0.00 0.00 4.12
3832 5242 3.003173 TCCTCTCCCACGCCCAAG 61.003 66.667 0.00 0.00 0.00 3.61
3833 5243 4.785453 CCTCTCCCACGCCCAAGC 62.785 72.222 0.00 0.00 0.00 4.01
3834 5244 3.710722 CTCTCCCACGCCCAAGCT 61.711 66.667 0.00 0.00 36.60 3.74
3835 5245 2.284331 TCTCCCACGCCCAAGCTA 60.284 61.111 0.00 0.00 36.60 3.32
3836 5246 2.125106 CTCCCACGCCCAAGCTAC 60.125 66.667 0.00 0.00 36.60 3.58
3837 5247 2.606519 TCCCACGCCCAAGCTACT 60.607 61.111 0.00 0.00 36.60 2.57
3838 5248 1.305465 TCCCACGCCCAAGCTACTA 60.305 57.895 0.00 0.00 36.60 1.82
3839 5249 1.144057 CCCACGCCCAAGCTACTAG 59.856 63.158 0.00 0.00 36.60 2.57
3840 5250 1.614241 CCCACGCCCAAGCTACTAGT 61.614 60.000 0.00 0.00 36.60 2.57
3841 5251 0.249398 CCACGCCCAAGCTACTAGTT 59.751 55.000 0.00 0.00 36.60 2.24
3842 5252 1.359848 CACGCCCAAGCTACTAGTTG 58.640 55.000 0.00 0.00 36.60 3.16
3843 5253 0.391263 ACGCCCAAGCTACTAGTTGC 60.391 55.000 19.89 19.89 36.60 4.17
3844 5254 1.090052 CGCCCAAGCTACTAGTTGCC 61.090 60.000 23.03 8.68 36.60 4.52
3845 5255 0.035439 GCCCAAGCTACTAGTTGCCA 60.035 55.000 23.03 0.00 35.50 4.92
3846 5256 1.408822 GCCCAAGCTACTAGTTGCCAT 60.409 52.381 23.03 11.69 35.50 4.40
3847 5257 2.292267 CCCAAGCTACTAGTTGCCATG 58.708 52.381 23.03 20.76 31.78 3.66
3848 5258 2.356125 CCCAAGCTACTAGTTGCCATGT 60.356 50.000 23.03 4.49 31.78 3.21
3849 5259 2.679837 CCAAGCTACTAGTTGCCATGTG 59.320 50.000 23.03 15.98 31.78 3.21
3850 5260 3.338249 CAAGCTACTAGTTGCCATGTGT 58.662 45.455 23.03 3.43 31.78 3.72
3851 5261 3.703001 AGCTACTAGTTGCCATGTGTT 57.297 42.857 23.03 2.74 31.78 3.32
3852 5262 4.021102 AGCTACTAGTTGCCATGTGTTT 57.979 40.909 23.03 2.04 31.78 2.83
3853 5263 4.398319 AGCTACTAGTTGCCATGTGTTTT 58.602 39.130 23.03 1.35 31.78 2.43
3854 5264 4.216257 AGCTACTAGTTGCCATGTGTTTTG 59.784 41.667 23.03 0.00 31.78 2.44
3855 5265 3.369546 ACTAGTTGCCATGTGTTTTGC 57.630 42.857 0.00 0.00 0.00 3.68
3856 5266 2.692557 ACTAGTTGCCATGTGTTTTGCA 59.307 40.909 0.00 0.00 0.00 4.08
3857 5267 2.228138 AGTTGCCATGTGTTTTGCAG 57.772 45.000 0.00 0.00 34.81 4.41
3858 5268 1.481772 AGTTGCCATGTGTTTTGCAGT 59.518 42.857 0.00 0.00 34.81 4.40
3859 5269 1.593933 GTTGCCATGTGTTTTGCAGTG 59.406 47.619 0.00 0.00 34.81 3.66
3860 5270 0.530211 TGCCATGTGTTTTGCAGTGC 60.530 50.000 8.58 8.58 0.00 4.40
3861 5271 0.530211 GCCATGTGTTTTGCAGTGCA 60.530 50.000 15.37 15.37 36.47 4.57
3862 5272 1.210870 CCATGTGTTTTGCAGTGCAC 58.789 50.000 19.58 9.40 38.71 4.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 8.888579 AACCGATTAATACTCATTTGTCCTAG 57.111 34.615 0.00 0.00 0.00 3.02
66 67 5.500234 TCCAGGATAGACCAAACTGATTTG 58.500 41.667 0.00 0.00 44.19 2.32
80 81 6.238239 CGATGAGACACGTATATCCAGGATAG 60.238 46.154 14.78 4.21 0.00 2.08
88 89 4.383052 CCTTTGCGATGAGACACGTATATC 59.617 45.833 0.00 0.00 0.00 1.63
94 95 0.716108 GTCCTTTGCGATGAGACACG 59.284 55.000 0.00 0.00 0.00 4.49
102 103 7.415206 GGTTAATAGTCATTTGTCCTTTGCGAT 60.415 37.037 0.00 0.00 0.00 4.58
103 104 6.128117 GGTTAATAGTCATTTGTCCTTTGCGA 60.128 38.462 0.00 0.00 0.00 5.10
104 105 6.027749 GGTTAATAGTCATTTGTCCTTTGCG 58.972 40.000 0.00 0.00 0.00 4.85
105 106 6.919721 TGGTTAATAGTCATTTGTCCTTTGC 58.080 36.000 0.00 0.00 0.00 3.68
106 107 8.522830 ACATGGTTAATAGTCATTTGTCCTTTG 58.477 33.333 0.00 0.00 0.00 2.77
110 111 6.095440 AGCACATGGTTAATAGTCATTTGTCC 59.905 38.462 0.00 0.00 0.00 4.02
112 113 6.095440 GGAGCACATGGTTAATAGTCATTTGT 59.905 38.462 0.00 0.00 0.00 2.83
113 114 6.095300 TGGAGCACATGGTTAATAGTCATTTG 59.905 38.462 0.00 0.00 0.00 2.32
117 118 4.835284 TGGAGCACATGGTTAATAGTCA 57.165 40.909 0.00 0.00 0.00 3.41
119 120 6.096846 GGAAATTGGAGCACATGGTTAATAGT 59.903 38.462 0.00 0.00 0.00 2.12
120 121 6.096705 TGGAAATTGGAGCACATGGTTAATAG 59.903 38.462 0.00 0.00 0.00 1.73
123 124 4.155709 TGGAAATTGGAGCACATGGTTAA 58.844 39.130 0.00 0.00 0.00 2.01
124 125 3.763360 CTGGAAATTGGAGCACATGGTTA 59.237 43.478 0.00 0.00 0.00 2.85
130 139 1.702182 TTGCTGGAAATTGGAGCACA 58.298 45.000 5.94 0.00 42.33 4.57
227 267 7.092444 ACAGTTAGAGATTATGATTGTTCCCCA 60.092 37.037 0.00 0.00 0.00 4.96
350 391 5.037383 TGTGTGGGTAGTATGTTGACAAA 57.963 39.130 0.00 0.00 0.00 2.83
366 420 0.304705 GACGTGCTTGTCTTGTGTGG 59.695 55.000 0.00 0.00 35.95 4.17
434 488 3.687125 TCAAGGTATCTAGCGATCGGAT 58.313 45.455 18.30 13.31 0.00 4.18
435 489 3.075148 CTCAAGGTATCTAGCGATCGGA 58.925 50.000 18.30 6.10 0.00 4.55
436 490 2.814919 ACTCAAGGTATCTAGCGATCGG 59.185 50.000 18.30 0.00 0.00 4.18
442 534 4.352887 GACGACAACTCAAGGTATCTAGC 58.647 47.826 0.00 0.00 0.00 3.42
466 558 2.360844 TCTCTCTAGCAACTGACCGAG 58.639 52.381 0.00 0.00 0.00 4.63
469 561 3.129638 ACGAATCTCTCTAGCAACTGACC 59.870 47.826 0.00 0.00 0.00 4.02
473 565 2.493675 TGCACGAATCTCTCTAGCAACT 59.506 45.455 0.00 0.00 31.15 3.16
506 599 4.961511 GTGTCGTGCGGTGCTGGA 62.962 66.667 0.00 0.00 0.00 3.86
513 606 2.048222 ATCAGTGGTGTCGTGCGG 60.048 61.111 0.00 0.00 0.00 5.69
515 608 1.790755 TAACATCAGTGGTGTCGTGC 58.209 50.000 10.04 0.00 0.00 5.34
517 610 3.181469 ACTGTTAACATCAGTGGTGTCGT 60.181 43.478 10.04 0.00 43.32 4.34
518 619 3.390135 ACTGTTAACATCAGTGGTGTCG 58.610 45.455 10.04 0.00 43.32 4.35
543 644 6.912951 TCTCCAATAGTATAGGTTGCTACC 57.087 41.667 9.54 9.54 45.39 3.18
546 647 9.950496 CATTTATCTCCAATAGTATAGGTTGCT 57.050 33.333 0.00 0.00 0.00 3.91
547 648 9.726438 ACATTTATCTCCAATAGTATAGGTTGC 57.274 33.333 0.00 0.00 0.00 4.17
580 681 9.632638 AAATCAAGCACTAGGTATATGTGAAAT 57.367 29.630 0.00 0.00 33.95 2.17
581 682 9.461312 AAAATCAAGCACTAGGTATATGTGAAA 57.539 29.630 0.00 0.00 33.95 2.69
608 709 7.653647 TCCAAATAAAGCAACGTGAACTAATT 58.346 30.769 0.00 0.00 0.00 1.40
621 722 4.097741 AGCACGCATATTCCAAATAAAGCA 59.902 37.500 0.00 0.00 0.00 3.91
754 897 7.014038 GCATGATTGAAGAATAGAAGGTGGATT 59.986 37.037 0.00 0.00 0.00 3.01
761 904 7.317842 ACAGTGCATGATTGAAGAATAGAAG 57.682 36.000 0.00 0.00 0.00 2.85
762 905 7.391275 TGAACAGTGCATGATTGAAGAATAGAA 59.609 33.333 0.00 0.00 0.00 2.10
765 908 7.634671 ATGAACAGTGCATGATTGAAGAATA 57.365 32.000 0.00 0.00 0.00 1.75
775 918 5.658468 TGTTGAAAAATGAACAGTGCATGA 58.342 33.333 0.00 0.00 0.00 3.07
776 919 5.050634 CCTGTTGAAAAATGAACAGTGCATG 60.051 40.000 0.00 0.00 45.09 4.06
777 920 5.051816 CCTGTTGAAAAATGAACAGTGCAT 58.948 37.500 0.00 0.00 45.09 3.96
778 921 4.159321 TCCTGTTGAAAAATGAACAGTGCA 59.841 37.500 0.00 0.00 45.09 4.57
781 924 5.804979 CGTTTCCTGTTGAAAAATGAACAGT 59.195 36.000 0.00 0.00 45.09 3.55
782 925 5.276348 GCGTTTCCTGTTGAAAAATGAACAG 60.276 40.000 0.00 0.00 44.30 3.16
783 926 4.564769 GCGTTTCCTGTTGAAAAATGAACA 59.435 37.500 0.00 0.00 44.30 3.18
784 927 4.026062 GGCGTTTCCTGTTGAAAAATGAAC 60.026 41.667 0.00 0.00 44.30 3.18
785 928 4.116238 GGCGTTTCCTGTTGAAAAATGAA 58.884 39.130 0.00 0.00 44.30 2.57
789 932 1.825474 TGGGCGTTTCCTGTTGAAAAA 59.175 42.857 0.00 0.00 44.30 1.94
790 933 1.475403 TGGGCGTTTCCTGTTGAAAA 58.525 45.000 0.00 0.00 44.30 2.29
792 935 1.243902 GATGGGCGTTTCCTGTTGAA 58.756 50.000 0.00 0.00 34.39 2.69
793 936 0.109532 TGATGGGCGTTTCCTGTTGA 59.890 50.000 0.00 0.00 34.39 3.18
794 937 0.958091 TTGATGGGCGTTTCCTGTTG 59.042 50.000 0.00 0.00 34.39 3.33
797 940 1.247567 AGTTTGATGGGCGTTTCCTG 58.752 50.000 0.00 0.00 34.39 3.86
799 942 3.694566 AGAATAGTTTGATGGGCGTTTCC 59.305 43.478 0.00 0.00 0.00 3.13
800 943 4.965119 AGAATAGTTTGATGGGCGTTTC 57.035 40.909 0.00 0.00 0.00 2.78
801 944 4.335594 GCTAGAATAGTTTGATGGGCGTTT 59.664 41.667 0.00 0.00 41.93 3.60
803 946 3.118408 TGCTAGAATAGTTTGATGGGCGT 60.118 43.478 0.00 0.00 41.93 5.68
804 947 3.466836 TGCTAGAATAGTTTGATGGGCG 58.533 45.455 0.00 0.00 41.93 6.13
806 949 5.824624 ACACATGCTAGAATAGTTTGATGGG 59.175 40.000 0.00 0.00 41.93 4.00
808 951 7.783090 AGACACATGCTAGAATAGTTTGATG 57.217 36.000 0.00 0.00 41.93 3.07
809 952 8.798859 AAAGACACATGCTAGAATAGTTTGAT 57.201 30.769 0.00 0.00 41.93 2.57
813 956 7.770433 TGCATAAAGACACATGCTAGAATAGTT 59.230 33.333 7.92 0.00 46.19 2.24
814 957 7.275183 TGCATAAAGACACATGCTAGAATAGT 58.725 34.615 7.92 0.00 46.19 2.12
865 1852 7.198306 AGAAACAATGTTTAGTCGGTAAAGG 57.802 36.000 11.71 0.00 30.93 3.11
867 1854 6.913673 GCAAGAAACAATGTTTAGTCGGTAAA 59.086 34.615 11.71 0.00 0.00 2.01
872 1859 5.510671 ACTGCAAGAAACAATGTTTAGTCG 58.489 37.500 11.71 2.47 37.43 4.18
876 1896 8.445275 TCTCTAACTGCAAGAAACAATGTTTA 57.555 30.769 11.71 0.00 37.43 2.01
883 1903 3.815401 GGCTTCTCTAACTGCAAGAAACA 59.185 43.478 0.00 0.00 37.43 2.83
889 1909 1.611673 GCCAGGCTTCTCTAACTGCAA 60.612 52.381 3.29 0.00 0.00 4.08
928 1949 6.596106 TGCTTATGATAAAAGAACTGCGGTAA 59.404 34.615 0.00 0.00 0.00 2.85
930 1951 4.941263 TGCTTATGATAAAAGAACTGCGGT 59.059 37.500 0.00 0.00 0.00 5.68
939 1960 8.589629 GCAAAGATGTTGTGCTTATGATAAAAG 58.410 33.333 3.58 0.00 35.36 2.27
963 1988 3.244284 ACCGTCAGTTAATTACCACTGCA 60.244 43.478 11.07 0.00 40.33 4.41
965 1990 6.592607 ACATAACCGTCAGTTAATTACCACTG 59.407 38.462 10.00 10.00 44.04 3.66
971 1996 7.267128 CCCTGTACATAACCGTCAGTTAATTA 58.733 38.462 0.00 0.00 44.04 1.40
1065 2105 1.852157 ACCCCATGAGAGGTTGCCA 60.852 57.895 0.00 0.00 29.94 4.92
1092 2132 1.910580 AATTCACCAGGTCGCGGGAT 61.911 55.000 6.13 0.00 0.00 3.85
1125 2165 1.305802 AGTGGGGTCGAGCATGGTA 60.306 57.895 17.59 0.00 0.00 3.25
1129 2169 4.101448 GGCAGTGGGGTCGAGCAT 62.101 66.667 17.59 0.00 0.00 3.79
1143 2183 2.917933 CCATTATTGTCGAAGAGGGCA 58.082 47.619 0.00 0.00 36.95 5.36
1148 2188 2.938451 CAGCAGCCATTATTGTCGAAGA 59.062 45.455 0.00 0.00 0.00 2.87
1179 2219 3.727258 CCGGGGAGGATTGTGGCA 61.727 66.667 0.00 0.00 45.00 4.92
1266 2306 0.109723 CGACAGGGTTCTTGGGGAAA 59.890 55.000 0.00 0.00 35.51 3.13
1362 2402 1.544724 CCGTGGTTGGGTCATGAAAT 58.455 50.000 0.00 0.00 0.00 2.17
1367 2407 1.678635 CATGCCGTGGTTGGGTCAT 60.679 57.895 0.00 0.00 0.00 3.06
1391 2431 4.157120 GCCATAGGCCGTCGTGGT 62.157 66.667 16.52 0.00 44.06 4.16
1461 2504 3.569277 GGAAGTCCTTACTCCGGTAGATC 59.431 52.174 0.00 0.00 33.75 2.75
1523 2566 0.037882 CTCGACCATGTCAGCAGTGT 60.038 55.000 0.00 0.00 32.09 3.55
1525 2568 0.037882 CACTCGACCATGTCAGCAGT 60.038 55.000 0.00 0.00 32.09 4.40
1530 2573 2.662596 GGGCACTCGACCATGTCA 59.337 61.111 0.00 0.00 41.77 3.58
1532 2575 4.082523 CGGGGCACTCGACCATGT 62.083 66.667 0.00 0.00 45.55 3.21
1548 2591 2.108362 GCCACCGGGAATAGGTCG 59.892 66.667 6.32 0.00 40.59 4.79
1624 2667 2.675056 GCTTCAGCACGTGCCTCAG 61.675 63.158 35.51 27.02 43.38 3.35
1653 2696 3.188048 CGTAGTAGTCCTGAGTCGTGTTT 59.812 47.826 0.00 0.00 0.00 2.83
1700 2746 2.203280 CCGGCACAAAGGTGTCCA 60.203 61.111 0.00 0.00 46.95 4.02
1855 2901 3.231222 CGATGTCGTCGTCCTTACC 57.769 57.895 6.28 0.00 45.19 2.85
1900 2946 2.548920 CGGAAATAGACTGGAGGATGCC 60.549 54.545 0.00 0.00 0.00 4.40
1948 3017 6.675026 ACATGCACACATCATAGCAAATATC 58.325 36.000 0.00 0.00 40.76 1.63
1992 3072 2.163818 TACCGTCTTTGTCAAGCCAG 57.836 50.000 0.00 0.00 0.00 4.85
1998 3078 3.188159 AGCTGTTTACCGTCTTTGTCA 57.812 42.857 0.00 0.00 0.00 3.58
2035 3115 3.618351 TCCTTAACGTCTCGATCTCCTT 58.382 45.455 0.00 0.00 0.00 3.36
2061 3160 1.079750 GAGCCAACAGACGACTCCC 60.080 63.158 0.00 0.00 0.00 4.30
2062 3161 1.444553 CGAGCCAACAGACGACTCC 60.445 63.158 0.00 0.00 0.00 3.85
2071 3170 1.597854 CCTGTGCTTCGAGCCAACA 60.598 57.895 4.73 3.21 41.51 3.33
2073 3172 1.597854 CACCTGTGCTTCGAGCCAA 60.598 57.895 4.73 0.00 41.51 4.52
2075 3174 0.674895 ATTCACCTGTGCTTCGAGCC 60.675 55.000 4.73 0.00 41.51 4.70
2081 3180 1.973281 CCGGCATTCACCTGTGCTT 60.973 57.895 0.00 0.00 41.04 3.91
2085 3184 2.034066 CCACCGGCATTCACCTGT 59.966 61.111 0.00 0.00 0.00 4.00
2109 3208 1.002315 GCACCCATGCCAACAATCTTT 59.998 47.619 0.00 0.00 46.97 2.52
2193 3298 1.377725 CGGATCCAGCAGCCAGTTT 60.378 57.895 13.41 0.00 0.00 2.66
2323 3428 6.241207 ACTTCTGATTGTATTTGAACACCG 57.759 37.500 0.00 0.00 0.00 4.94
2357 3462 0.682292 TTGTGAGGTCGGTGCACATA 59.318 50.000 20.43 2.21 41.60 2.29
2395 3504 8.383175 ACAGTGGGAAAACTCATCTAAATTAGA 58.617 33.333 5.07 5.07 39.50 2.10
2408 3518 2.831526 ACTTTGCAACAGTGGGAAAACT 59.168 40.909 0.00 0.00 0.00 2.66
2434 3544 5.506832 CGCATACGAGGTGAAACAATAAAAC 59.493 40.000 0.00 0.00 43.93 2.43
2494 3612 1.425412 ACGACGGCTTGTACACATTC 58.575 50.000 0.00 0.00 0.00 2.67
2602 3727 6.802608 ACTGAATTTTACATGATGCATCCAG 58.197 36.000 23.67 19.12 0.00 3.86
2614 3739 8.898761 AGTCACACATTGTAACTGAATTTTACA 58.101 29.630 0.00 0.00 37.60 2.41
2617 3742 9.730420 GTAAGTCACACATTGTAACTGAATTTT 57.270 29.630 8.42 2.09 0.00 1.82
2686 3812 1.072505 GTCCCAAGCCTCCGAAACA 59.927 57.895 0.00 0.00 0.00 2.83
2703 3829 3.803082 GCCGTGATGCATGTGCGT 61.803 61.111 2.46 0.00 45.83 5.24
2805 3931 1.220206 CAGCCTCCATGCTTCGAGT 59.780 57.895 0.00 0.00 40.32 4.18
2903 4029 7.390440 TCTCCAAGTGTTCGACATTCATTATTT 59.610 33.333 0.00 0.00 0.00 1.40
2964 4090 9.059485 GTGTATGCAGTAGTATAAGTTATACGC 57.941 37.037 21.74 19.25 44.41 4.42
2971 4097 9.798994 GTTTACAGTGTATGCAGTAGTATAAGT 57.201 33.333 3.28 0.00 0.00 2.24
2992 4118 9.880157 TTGTATCCCAGTAAAGTAGATGTTTAC 57.120 33.333 0.00 0.00 39.63 2.01
3096 4230 8.576442 ACCATTTTAATGTTCCAACAACTCTAG 58.424 33.333 0.00 0.00 43.03 2.43
3133 4267 7.554959 AGAACATCTGGTCCTCTTTAGTTTA 57.445 36.000 0.00 0.00 30.36 2.01
3143 4277 2.289945 GCTGTCAAGAACATCTGGTCCT 60.290 50.000 0.00 0.00 37.23 3.85
3225 4360 0.175989 ACGTCCTGCTAAGCTTAGGC 59.824 55.000 29.93 22.59 39.06 3.93
3244 4379 8.924303 AGTAAGTAGCTTGATATGTGGATAACA 58.076 33.333 0.00 0.00 44.79 2.41
3288 4698 8.082242 ACGGGAAACTTAAGAAAATCAAGAATG 58.918 33.333 10.09 0.00 0.00 2.67
3291 4701 6.996282 AGACGGGAAACTTAAGAAAATCAAGA 59.004 34.615 10.09 0.00 0.00 3.02
3304 4714 3.203716 GACAAGTTGAGACGGGAAACTT 58.796 45.455 10.54 0.00 43.18 2.66
3311 4721 2.557056 TCCTACTGACAAGTTGAGACGG 59.443 50.000 10.54 8.09 37.88 4.79
3326 4736 1.623811 AGTGATGGCAACGTTCCTACT 59.376 47.619 14.95 13.15 42.51 2.57
3333 4743 0.036732 ATGTCCAGTGATGGCAACGT 59.963 50.000 0.00 0.00 42.51 3.99
3364 4774 3.181473 TGGGGTCATTTAGGACGTATTCG 60.181 47.826 0.00 0.00 38.70 3.34
3371 4781 3.545703 CACTCATGGGGTCATTTAGGAC 58.454 50.000 0.00 0.00 37.06 3.85
3437 4847 3.403038 CGAGGTGGAGAGACAAATTTGT 58.597 45.455 23.49 23.49 45.65 2.83
3446 4856 1.908299 TTGCTGCGAGGTGGAGAGA 60.908 57.895 0.00 0.00 38.54 3.10
3505 4915 5.901552 AGGCGTTGATTCTCAAAAGAAAAA 58.098 33.333 0.00 0.00 44.49 1.94
3506 4916 5.067153 TGAGGCGTTGATTCTCAAAAGAAAA 59.933 36.000 0.00 0.00 44.49 2.29
3507 4917 4.578516 TGAGGCGTTGATTCTCAAAAGAAA 59.421 37.500 0.00 0.00 44.49 2.52
3508 4918 4.133820 TGAGGCGTTGATTCTCAAAAGAA 58.866 39.130 0.00 0.00 45.36 2.52
3509 4919 3.738982 TGAGGCGTTGATTCTCAAAAGA 58.261 40.909 0.00 0.00 38.22 2.52
3510 4920 4.488126 TTGAGGCGTTGATTCTCAAAAG 57.512 40.909 0.00 0.00 42.38 2.27
3515 4925 9.387123 GATTAAATAATTGAGGCGTTGATTCTC 57.613 33.333 0.00 0.00 0.00 2.87
3525 4935 8.696410 TTTCCGTTTGATTAAATAATTGAGGC 57.304 30.769 0.00 0.00 0.00 4.70
3545 4955 0.875728 TGTGGGCGTTAACATTTCCG 59.124 50.000 6.39 0.00 0.00 4.30
3546 4956 1.400500 CGTGTGGGCGTTAACATTTCC 60.400 52.381 6.39 1.91 0.00 3.13
3547 4957 1.264826 ACGTGTGGGCGTTAACATTTC 59.735 47.619 6.39 0.00 43.04 2.17
3548 4958 1.002251 CACGTGTGGGCGTTAACATTT 60.002 47.619 7.58 0.00 43.83 2.32
3549 4959 0.589223 CACGTGTGGGCGTTAACATT 59.411 50.000 7.58 0.00 43.83 2.71
3550 4960 0.533308 ACACGTGTGGGCGTTAACAT 60.533 50.000 22.71 0.00 43.83 2.71
3551 4961 1.153409 ACACGTGTGGGCGTTAACA 60.153 52.632 22.71 0.00 43.83 2.41
3552 4962 1.152989 TCACACGTGTGGGCGTTAAC 61.153 55.000 39.88 0.00 45.65 2.01
3553 4963 0.876777 CTCACACGTGTGGGCGTTAA 60.877 55.000 39.88 22.70 45.65 2.01
3554 4964 1.300311 CTCACACGTGTGGGCGTTA 60.300 57.895 39.88 23.35 45.65 3.18
3555 4965 2.587753 CTCACACGTGTGGGCGTT 60.588 61.111 39.88 7.83 45.65 4.84
3565 4975 0.179240 GAGATGCAAACGCTCACACG 60.179 55.000 0.00 0.00 39.50 4.49
3566 4976 0.179240 CGAGATGCAAACGCTCACAC 60.179 55.000 0.00 0.00 0.00 3.82
3567 4977 2.153039 CGAGATGCAAACGCTCACA 58.847 52.632 0.00 0.00 0.00 3.58
3595 5005 1.393539 CATGAACGGACGTGAATCCAC 59.606 52.381 0.00 0.00 38.87 4.02
3596 5006 1.273886 TCATGAACGGACGTGAATCCA 59.726 47.619 0.00 0.00 38.87 3.41
3597 5007 1.927174 CTCATGAACGGACGTGAATCC 59.073 52.381 0.00 0.00 35.74 3.01
3598 5008 1.324736 GCTCATGAACGGACGTGAATC 59.675 52.381 0.00 0.00 35.74 2.52
3599 5009 1.359848 GCTCATGAACGGACGTGAAT 58.640 50.000 0.00 0.00 35.74 2.57
3600 5010 1.006825 CGCTCATGAACGGACGTGAA 61.007 55.000 10.66 0.00 35.74 3.18
3601 5011 1.443702 CGCTCATGAACGGACGTGA 60.444 57.895 10.66 6.02 35.05 4.35
3602 5012 3.071459 GCGCTCATGAACGGACGTG 62.071 63.158 19.29 3.80 0.00 4.49
3603 5013 2.809601 GCGCTCATGAACGGACGT 60.810 61.111 19.29 0.00 0.00 4.34
3604 5014 2.809174 TGCGCTCATGAACGGACG 60.809 61.111 19.29 8.63 0.00 4.79
3605 5015 2.778679 GTGCGCTCATGAACGGAC 59.221 61.111 23.97 23.97 43.17 4.79
3606 5016 2.757155 TTCGTGCGCTCATGAACGGA 62.757 55.000 19.29 14.43 41.78 4.69
3607 5017 2.379634 TTCGTGCGCTCATGAACGG 61.380 57.895 19.29 4.01 41.78 4.44
3608 5018 3.155424 TTCGTGCGCTCATGAACG 58.845 55.556 14.06 14.06 41.78 3.95
3611 5021 1.001624 CAAGATTCGTGCGCTCATGA 58.998 50.000 9.73 0.00 36.50 3.07
3612 5022 0.027194 CCAAGATTCGTGCGCTCATG 59.973 55.000 9.73 0.00 0.00 3.07
3613 5023 1.709147 GCCAAGATTCGTGCGCTCAT 61.709 55.000 9.73 0.00 0.00 2.90
3614 5024 2.390599 GCCAAGATTCGTGCGCTCA 61.391 57.895 9.73 0.00 0.00 4.26
3615 5025 1.709147 ATGCCAAGATTCGTGCGCTC 61.709 55.000 9.73 3.51 0.00 5.03
3616 5026 1.746615 ATGCCAAGATTCGTGCGCT 60.747 52.632 9.73 0.00 0.00 5.92
3617 5027 1.584483 CATGCCAAGATTCGTGCGC 60.584 57.895 0.00 0.00 0.00 6.09
3618 5028 0.168788 AACATGCCAAGATTCGTGCG 59.831 50.000 0.00 0.00 0.00 5.34
3619 5029 2.095059 AGAAACATGCCAAGATTCGTGC 60.095 45.455 0.00 0.00 0.00 5.34
3620 5030 3.837213 AGAAACATGCCAAGATTCGTG 57.163 42.857 0.00 0.00 0.00 4.35
3621 5031 4.393062 CACTAGAAACATGCCAAGATTCGT 59.607 41.667 0.00 0.00 0.00 3.85
3622 5032 4.728882 GCACTAGAAACATGCCAAGATTCG 60.729 45.833 0.00 0.00 33.06 3.34
3623 5033 4.666237 GCACTAGAAACATGCCAAGATTC 58.334 43.478 0.00 0.00 33.06 2.52
3624 5034 4.708726 GCACTAGAAACATGCCAAGATT 57.291 40.909 0.00 0.00 33.06 2.40
3631 5041 1.156736 ACGTGGCACTAGAAACATGC 58.843 50.000 16.72 0.00 38.68 4.06
3632 5042 2.930040 CCTACGTGGCACTAGAAACATG 59.070 50.000 16.72 0.00 0.00 3.21
3633 5043 2.829720 TCCTACGTGGCACTAGAAACAT 59.170 45.455 16.72 0.00 35.26 2.71
3634 5044 2.029649 GTCCTACGTGGCACTAGAAACA 60.030 50.000 16.72 0.00 35.26 2.83
3635 5045 2.230750 AGTCCTACGTGGCACTAGAAAC 59.769 50.000 16.72 15.11 35.26 2.78
3636 5046 2.230508 CAGTCCTACGTGGCACTAGAAA 59.769 50.000 16.72 5.78 35.26 2.52
3637 5047 1.816835 CAGTCCTACGTGGCACTAGAA 59.183 52.381 16.72 0.00 35.26 2.10
3638 5048 1.460504 CAGTCCTACGTGGCACTAGA 58.539 55.000 16.72 3.95 35.26 2.43
3639 5049 0.456221 CCAGTCCTACGTGGCACTAG 59.544 60.000 16.72 14.90 35.26 2.57
3640 5050 2.575108 CCAGTCCTACGTGGCACTA 58.425 57.895 16.72 6.37 35.26 2.74
3641 5051 3.377656 CCAGTCCTACGTGGCACT 58.622 61.111 16.72 0.00 35.26 4.40
3645 5055 2.579201 CAGGCCAGTCCTACGTGG 59.421 66.667 5.01 0.00 45.52 4.94
3646 5056 2.283529 ACCAGGCCAGTCCTACGTG 61.284 63.158 5.01 0.00 45.52 4.49
3647 5057 2.119832 ACCAGGCCAGTCCTACGT 59.880 61.111 5.01 0.00 45.52 3.57
3648 5058 2.283529 ACACCAGGCCAGTCCTACG 61.284 63.158 5.01 0.00 45.52 3.51
3649 5059 1.296715 CACACCAGGCCAGTCCTAC 59.703 63.158 5.01 0.00 45.52 3.18
3650 5060 1.152118 ACACACCAGGCCAGTCCTA 60.152 57.895 5.01 0.00 45.52 2.94
3652 5062 2.281761 CACACACCAGGCCAGTCC 60.282 66.667 5.01 0.00 0.00 3.85
3653 5063 2.281761 CCACACACCAGGCCAGTC 60.282 66.667 5.01 0.00 0.00 3.51
3654 5064 3.889692 CCCACACACCAGGCCAGT 61.890 66.667 5.01 0.00 0.00 4.00
3659 5069 2.978010 GAACGCCCACACACCAGG 60.978 66.667 0.00 0.00 0.00 4.45
3660 5070 2.203139 TGAACGCCCACACACCAG 60.203 61.111 0.00 0.00 0.00 4.00
3661 5071 2.515057 GTGAACGCCCACACACCA 60.515 61.111 3.27 0.00 37.04 4.17
3662 5072 3.284449 GGTGAACGCCCACACACC 61.284 66.667 9.52 0.00 44.23 4.16
3663 5073 2.203153 AGGTGAACGCCCACACAC 60.203 61.111 9.52 0.00 38.74 3.82
3664 5074 2.203139 CAGGTGAACGCCCACACA 60.203 61.111 9.52 0.00 38.74 3.72
3665 5075 2.978010 CCAGGTGAACGCCCACAC 60.978 66.667 9.52 0.00 38.74 3.82
3666 5076 3.469863 GACCAGGTGAACGCCCACA 62.470 63.158 0.00 0.00 38.74 4.17
3667 5077 2.668550 GACCAGGTGAACGCCCAC 60.669 66.667 0.00 0.00 36.37 4.61
3668 5078 4.308458 CGACCAGGTGAACGCCCA 62.308 66.667 0.00 0.00 0.00 5.36
3686 5096 2.635443 GGTGAAACGGCCATGTGGG 61.635 63.158 2.24 0.00 38.12 4.61
3687 5097 1.900981 TGGTGAAACGGCCATGTGG 60.901 57.895 2.24 0.00 38.12 4.17
3688 5098 1.285641 GTGGTGAAACGGCCATGTG 59.714 57.895 2.24 0.00 38.12 3.21
3689 5099 1.152860 TGTGGTGAAACGGCCATGT 60.153 52.632 2.24 0.00 38.12 3.21
3690 5100 0.888736 TCTGTGGTGAAACGGCCATG 60.889 55.000 2.24 0.00 38.12 3.66
3691 5101 0.606401 CTCTGTGGTGAAACGGCCAT 60.606 55.000 2.24 0.00 38.12 4.40
3692 5102 1.227823 CTCTGTGGTGAAACGGCCA 60.228 57.895 2.24 0.00 38.12 5.36
3693 5103 1.966451 CCTCTGTGGTGAAACGGCC 60.966 63.158 0.00 0.00 38.12 6.13
3694 5104 0.951040 CTCCTCTGTGGTGAAACGGC 60.951 60.000 0.00 0.00 38.12 5.68
3695 5105 0.320771 CCTCCTCTGTGGTGAAACGG 60.321 60.000 0.00 0.00 38.12 4.44
3696 5106 0.320771 CCCTCCTCTGTGGTGAAACG 60.321 60.000 0.00 0.00 38.12 3.60
3697 5107 0.036875 CCCCTCCTCTGTGGTGAAAC 59.963 60.000 0.00 0.00 37.07 2.78
3698 5108 0.401395 ACCCCTCCTCTGTGGTGAAA 60.401 55.000 0.00 0.00 37.07 2.69
3699 5109 0.401395 AACCCCTCCTCTGTGGTGAA 60.401 55.000 0.00 0.00 37.07 3.18
3700 5110 1.127567 CAACCCCTCCTCTGTGGTGA 61.128 60.000 0.00 0.00 37.07 4.02
3701 5111 1.376466 CAACCCCTCCTCTGTGGTG 59.624 63.158 0.00 0.00 37.07 4.17
3702 5112 1.847968 CCAACCCCTCCTCTGTGGT 60.848 63.158 0.00 0.00 37.07 4.16
3703 5113 1.847968 ACCAACCCCTCCTCTGTGG 60.848 63.158 0.00 0.00 37.10 4.17
3704 5114 1.376466 CACCAACCCCTCCTCTGTG 59.624 63.158 0.00 0.00 0.00 3.66
3705 5115 1.073706 ACACCAACCCCTCCTCTGT 60.074 57.895 0.00 0.00 0.00 3.41
3706 5116 1.376466 CACACCAACCCCTCCTCTG 59.624 63.158 0.00 0.00 0.00 3.35
3707 5117 1.073706 ACACACCAACCCCTCCTCT 60.074 57.895 0.00 0.00 0.00 3.69
3708 5118 1.073199 CACACACCAACCCCTCCTC 59.927 63.158 0.00 0.00 0.00 3.71
3709 5119 2.460853 CCACACACCAACCCCTCCT 61.461 63.158 0.00 0.00 0.00 3.69
3710 5120 2.115266 CCACACACCAACCCCTCC 59.885 66.667 0.00 0.00 0.00 4.30
3711 5121 2.115266 CCCACACACCAACCCCTC 59.885 66.667 0.00 0.00 0.00 4.30
3712 5122 4.218686 GCCCACACACCAACCCCT 62.219 66.667 0.00 0.00 0.00 4.79
3714 5124 4.887190 ACGCCCACACACCAACCC 62.887 66.667 0.00 0.00 0.00 4.11
3715 5125 2.831284 AACGCCCACACACCAACC 60.831 61.111 0.00 0.00 0.00 3.77
3716 5126 2.058829 CTGAACGCCCACACACCAAC 62.059 60.000 0.00 0.00 0.00 3.77
3717 5127 1.821759 CTGAACGCCCACACACCAA 60.822 57.895 0.00 0.00 0.00 3.67
3718 5128 2.203139 CTGAACGCCCACACACCA 60.203 61.111 0.00 0.00 0.00 4.17
3719 5129 3.660111 GCTGAACGCCCACACACC 61.660 66.667 0.00 0.00 0.00 4.16
3720 5130 2.896801 CTGCTGAACGCCCACACAC 61.897 63.158 0.00 0.00 38.05 3.82
3721 5131 2.591429 CTGCTGAACGCCCACACA 60.591 61.111 0.00 0.00 38.05 3.72
3722 5132 2.117941 GAACTGCTGAACGCCCACAC 62.118 60.000 0.00 0.00 38.05 3.82
3723 5133 1.891919 GAACTGCTGAACGCCCACA 60.892 57.895 0.00 0.00 38.05 4.17
3724 5134 2.946762 GAACTGCTGAACGCCCAC 59.053 61.111 0.00 0.00 38.05 4.61
3725 5135 2.664851 CGAACTGCTGAACGCCCA 60.665 61.111 0.00 0.00 38.05 5.36
3726 5136 4.090057 GCGAACTGCTGAACGCCC 62.090 66.667 20.32 3.43 44.27 6.13
3729 5139 2.664851 TGGGCGAACTGCTGAACG 60.665 61.111 0.00 3.89 45.43 3.95
3730 5140 1.237285 ATGTGGGCGAACTGCTGAAC 61.237 55.000 0.00 0.00 45.43 3.18
3731 5141 1.073025 ATGTGGGCGAACTGCTGAA 59.927 52.632 0.00 0.00 45.43 3.02
3732 5142 1.672030 CATGTGGGCGAACTGCTGA 60.672 57.895 0.00 0.00 45.43 4.26
3733 5143 2.872557 CATGTGGGCGAACTGCTG 59.127 61.111 0.00 0.00 45.43 4.41
3734 5144 3.058160 GCATGTGGGCGAACTGCT 61.058 61.111 0.00 0.00 45.43 4.24
3735 5145 4.120331 GGCATGTGGGCGAACTGC 62.120 66.667 0.00 0.00 45.38 4.40
3742 5152 2.047939 GCAAAGTGGCATGTGGGC 60.048 61.111 0.00 0.00 43.73 5.36
3743 5153 1.005867 GTGCAAAGTGGCATGTGGG 60.006 57.895 0.00 0.00 46.92 4.61
3744 5154 1.372004 CGTGCAAAGTGGCATGTGG 60.372 57.895 0.00 0.00 46.92 4.17
3745 5155 4.231753 CGTGCAAAGTGGCATGTG 57.768 55.556 0.00 0.00 46.92 3.21
3748 5158 2.336088 GTGCGTGCAAAGTGGCAT 59.664 55.556 0.00 0.00 46.92 4.40
3749 5159 3.136791 TGTGCGTGCAAAGTGGCA 61.137 55.556 0.00 0.00 42.53 4.92
3750 5160 2.655044 GTGTGCGTGCAAAGTGGC 60.655 61.111 0.00 0.00 0.00 5.01
3751 5161 1.586042 GTGTGTGCGTGCAAAGTGG 60.586 57.895 0.00 0.00 0.00 4.00
3752 5162 0.455802 TTGTGTGTGCGTGCAAAGTG 60.456 50.000 0.00 0.00 0.00 3.16
3753 5163 0.179166 CTTGTGTGTGCGTGCAAAGT 60.179 50.000 0.00 0.00 0.00 2.66
3754 5164 0.866906 CCTTGTGTGTGCGTGCAAAG 60.867 55.000 0.00 0.00 0.00 2.77
3755 5165 1.138459 CCTTGTGTGTGCGTGCAAA 59.862 52.632 0.00 0.00 0.00 3.68
3756 5166 2.769539 CCCTTGTGTGTGCGTGCAA 61.770 57.895 0.00 0.00 0.00 4.08
3757 5167 3.208383 CCCTTGTGTGTGCGTGCA 61.208 61.111 0.00 0.00 0.00 4.57
3758 5168 4.629115 GCCCTTGTGTGTGCGTGC 62.629 66.667 0.00 0.00 0.00 5.34
3759 5169 1.568612 CTAGCCCTTGTGTGTGCGTG 61.569 60.000 0.00 0.00 0.00 5.34
3760 5170 1.301716 CTAGCCCTTGTGTGTGCGT 60.302 57.895 0.00 0.00 0.00 5.24
3761 5171 1.301716 ACTAGCCCTTGTGTGTGCG 60.302 57.895 0.00 0.00 0.00 5.34
3762 5172 0.535102 ACACTAGCCCTTGTGTGTGC 60.535 55.000 13.28 0.00 45.11 4.57
3763 5173 3.706055 ACACTAGCCCTTGTGTGTG 57.294 52.632 13.28 0.00 45.11 3.82
3768 5178 1.060163 ACCCACACACTAGCCCTTGT 61.060 55.000 0.00 0.00 0.00 3.16
3769 5179 0.981183 TACCCACACACTAGCCCTTG 59.019 55.000 0.00 0.00 0.00 3.61
3770 5180 1.966845 ATACCCACACACTAGCCCTT 58.033 50.000 0.00 0.00 0.00 3.95
3771 5181 1.966845 AATACCCACACACTAGCCCT 58.033 50.000 0.00 0.00 0.00 5.19
3772 5182 2.365582 CAAATACCCACACACTAGCCC 58.634 52.381 0.00 0.00 0.00 5.19
3773 5183 1.743394 GCAAATACCCACACACTAGCC 59.257 52.381 0.00 0.00 0.00 3.93
3774 5184 1.743394 GGCAAATACCCACACACTAGC 59.257 52.381 0.00 0.00 0.00 3.42
3775 5185 3.066291 TGGCAAATACCCACACACTAG 57.934 47.619 0.00 0.00 0.00 2.57
3776 5186 3.265737 AGATGGCAAATACCCACACACTA 59.734 43.478 0.00 0.00 34.68 2.74
3777 5187 2.041620 AGATGGCAAATACCCACACACT 59.958 45.455 0.00 0.00 34.68 3.55
3778 5188 2.423538 GAGATGGCAAATACCCACACAC 59.576 50.000 0.00 0.00 34.68 3.82
3779 5189 2.722094 GAGATGGCAAATACCCACACA 58.278 47.619 0.00 0.00 34.68 3.72
3780 5190 1.670811 CGAGATGGCAAATACCCACAC 59.329 52.381 0.00 0.00 34.68 3.82
3781 5191 2.016604 GCGAGATGGCAAATACCCACA 61.017 52.381 0.00 0.00 34.68 4.17
3782 5192 0.663153 GCGAGATGGCAAATACCCAC 59.337 55.000 0.00 0.00 34.68 4.61
3783 5193 0.465460 GGCGAGATGGCAAATACCCA 60.465 55.000 0.00 0.00 44.08 4.51
3784 5194 2.331265 GGCGAGATGGCAAATACCC 58.669 57.895 0.00 0.00 44.08 3.69
3802 5212 4.436998 GAGGAGACGGGCGTGTGG 62.437 72.222 0.00 0.00 0.00 4.17
3803 5213 3.343788 GAGAGGAGACGGGCGTGTG 62.344 68.421 0.00 0.00 0.00 3.82
3804 5214 3.063084 GAGAGGAGACGGGCGTGT 61.063 66.667 0.00 0.00 0.00 4.49
3805 5215 3.827898 GGAGAGGAGACGGGCGTG 61.828 72.222 0.00 0.00 0.00 5.34
3808 5218 3.462678 GTGGGAGAGGAGACGGGC 61.463 72.222 0.00 0.00 0.00 6.13
3809 5219 3.141488 CGTGGGAGAGGAGACGGG 61.141 72.222 0.00 0.00 0.00 5.28
3810 5220 3.827898 GCGTGGGAGAGGAGACGG 61.828 72.222 0.00 0.00 32.45 4.79
3811 5221 3.827898 GGCGTGGGAGAGGAGACG 61.828 72.222 0.00 0.00 34.93 4.18
3812 5222 3.462678 GGGCGTGGGAGAGGAGAC 61.463 72.222 0.00 0.00 0.00 3.36
3813 5223 3.539593 TTGGGCGTGGGAGAGGAGA 62.540 63.158 0.00 0.00 0.00 3.71
3814 5224 3.003173 TTGGGCGTGGGAGAGGAG 61.003 66.667 0.00 0.00 0.00 3.69
3815 5225 3.003173 CTTGGGCGTGGGAGAGGA 61.003 66.667 0.00 0.00 0.00 3.71
3816 5226 4.785453 GCTTGGGCGTGGGAGAGG 62.785 72.222 0.00 0.00 0.00 3.69
3817 5227 2.359169 TAGCTTGGGCGTGGGAGAG 61.359 63.158 0.00 0.00 44.37 3.20
3818 5228 2.284331 TAGCTTGGGCGTGGGAGA 60.284 61.111 0.00 0.00 44.37 3.71
3819 5229 1.327690 TAGTAGCTTGGGCGTGGGAG 61.328 60.000 0.00 0.00 44.37 4.30
3820 5230 1.305465 TAGTAGCTTGGGCGTGGGA 60.305 57.895 0.00 0.00 44.37 4.37
3821 5231 1.144057 CTAGTAGCTTGGGCGTGGG 59.856 63.158 0.00 0.00 44.37 4.61
3822 5232 0.249398 AACTAGTAGCTTGGGCGTGG 59.751 55.000 0.00 0.00 44.37 4.94
3823 5233 1.359848 CAACTAGTAGCTTGGGCGTG 58.640 55.000 0.00 0.00 44.37 5.34
3824 5234 0.391263 GCAACTAGTAGCTTGGGCGT 60.391 55.000 0.00 0.00 44.37 5.68
3825 5235 1.090052 GGCAACTAGTAGCTTGGGCG 61.090 60.000 0.00 0.00 44.37 6.13
3826 5236 0.035439 TGGCAACTAGTAGCTTGGGC 60.035 55.000 0.00 0.00 36.53 5.36
3827 5237 2.292267 CATGGCAACTAGTAGCTTGGG 58.708 52.381 0.00 0.00 37.61 4.12
3828 5238 2.679837 CACATGGCAACTAGTAGCTTGG 59.320 50.000 0.00 0.00 37.61 3.61
3829 5239 3.338249 ACACATGGCAACTAGTAGCTTG 58.662 45.455 0.00 3.00 37.61 4.01
3830 5240 3.703001 ACACATGGCAACTAGTAGCTT 57.297 42.857 0.00 0.00 37.61 3.74
3831 5241 3.703001 AACACATGGCAACTAGTAGCT 57.297 42.857 0.00 0.00 37.61 3.32
3832 5242 4.475944 CAAAACACATGGCAACTAGTAGC 58.524 43.478 0.00 0.00 37.61 3.58
3833 5243 4.023279 TGCAAAACACATGGCAACTAGTAG 60.023 41.667 0.00 0.00 32.54 2.57
3834 5244 3.885901 TGCAAAACACATGGCAACTAGTA 59.114 39.130 0.00 0.00 32.54 1.82
3835 5245 2.692557 TGCAAAACACATGGCAACTAGT 59.307 40.909 0.00 0.00 32.54 2.57
3836 5246 3.243501 ACTGCAAAACACATGGCAACTAG 60.244 43.478 0.00 0.00 35.59 2.57
3837 5247 2.692557 ACTGCAAAACACATGGCAACTA 59.307 40.909 0.00 0.00 35.59 2.24
3838 5248 1.481772 ACTGCAAAACACATGGCAACT 59.518 42.857 0.00 0.00 35.59 3.16
3839 5249 1.593933 CACTGCAAAACACATGGCAAC 59.406 47.619 0.00 0.00 35.59 4.17
3840 5250 1.937278 CACTGCAAAACACATGGCAA 58.063 45.000 0.00 0.00 35.59 4.52
3841 5251 0.530211 GCACTGCAAAACACATGGCA 60.530 50.000 0.00 0.00 34.66 4.92
3842 5252 0.530211 TGCACTGCAAAACACATGGC 60.530 50.000 0.00 0.00 34.76 4.40
3843 5253 1.210870 GTGCACTGCAAAACACATGG 58.789 50.000 10.32 0.00 41.47 3.66


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.