Multiple sequence alignment - TraesCS2A01G585300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G585300 chr2A 100.000 3836 0 0 1 3836 776171583 776167748 0.000000e+00 7084.0
1 TraesCS2A01G585300 chr2A 86.822 2398 220 45 681 3039 776212835 776215175 0.000000e+00 2590.0
2 TraesCS2A01G585300 chr2A 90.191 418 38 2 58 472 704698521 704698104 3.370000e-150 542.0
3 TraesCS2A01G585300 chr2B 90.898 2428 187 14 559 2962 781149477 781151894 0.000000e+00 3229.0
4 TraesCS2A01G585300 chr2B 86.765 2448 225 38 573 2961 780875372 780872965 0.000000e+00 2634.0
5 TraesCS2A01G585300 chr2B 90.397 1614 125 13 1359 2952 781085479 781083876 0.000000e+00 2095.0
6 TraesCS2A01G585300 chr2B 86.407 1155 95 28 1832 2952 780829667 780828541 0.000000e+00 1206.0
7 TraesCS2A01G585300 chr2B 95.105 286 14 0 3330 3615 780872589 780872304 5.840000e-123 451.0
8 TraesCS2A01G585300 chr2B 91.968 249 19 1 3333 3581 781083461 781083214 7.890000e-92 348.0
9 TraesCS2A01G585300 chr2B 96.154 208 8 0 3611 3818 780872234 780872027 1.320000e-89 340.0
10 TraesCS2A01G585300 chr2B 81.618 408 22 16 3105 3511 781152112 781152467 4.850000e-74 289.0
11 TraesCS2A01G585300 chr2B 91.620 179 15 0 2924 3102 780872946 780872768 8.230000e-62 248.0
12 TraesCS2A01G585300 chr2B 88.136 177 15 6 2924 3096 780828537 780828363 5.020000e-49 206.0
13 TraesCS2A01G585300 chr2B 96.748 123 4 0 3105 3227 780872722 780872600 5.020000e-49 206.0
14 TraesCS2A01G585300 chr2B 88.202 178 14 7 2924 3096 781083872 781083697 5.020000e-49 206.0
15 TraesCS2A01G585300 chr2B 83.265 245 20 16 3612 3836 781152619 781152862 5.020000e-49 206.0
16 TraesCS2A01G585300 chr2B 84.158 202 21 8 3105 3304 781083651 781083459 6.540000e-43 185.0
17 TraesCS2A01G585300 chr2B 80.591 237 30 12 3615 3836 781083121 781082886 6.590000e-38 169.0
18 TraesCS2A01G585300 chr2B 95.833 48 2 0 3568 3615 781152484 781152531 1.140000e-10 78.7
19 TraesCS2A01G585300 chr6D 87.341 2275 218 31 744 2965 69108763 69106506 0.000000e+00 2542.0
20 TraesCS2A01G585300 chr6D 80.706 2182 319 50 822 2964 459064396 459062278 0.000000e+00 1604.0
21 TraesCS2A01G585300 chr6D 92.875 393 26 2 744 1135 466592358 466591967 1.550000e-158 569.0
22 TraesCS2A01G585300 chr6D 87.037 108 14 0 611 718 459064551 459064444 5.200000e-24 122.0
23 TraesCS2A01G585300 chr6D 98.305 59 1 0 1 59 433303414 433303472 1.890000e-18 104.0
24 TraesCS2A01G585300 chr2D 86.966 2271 226 29 744 2962 117631196 117633448 0.000000e+00 2490.0
25 TraesCS2A01G585300 chr2D 86.552 2268 241 34 488 2720 651431451 651433689 0.000000e+00 2440.0
26 TraesCS2A01G585300 chr2D 86.848 1361 118 22 1650 2965 651422738 651421394 0.000000e+00 1465.0
27 TraesCS2A01G585300 chr2D 90.164 366 29 2 3257 3615 651527876 651528241 1.610000e-128 470.0
28 TraesCS2A01G585300 chr2D 87.745 408 40 6 73 476 8639570 8639971 5.800000e-128 468.0
29 TraesCS2A01G585300 chr2D 96.916 227 7 0 3610 3836 651490740 651490966 7.780000e-102 381.0
30 TraesCS2A01G585300 chr2D 93.392 227 4 1 3610 3836 651528327 651528542 3.700000e-85 326.0
31 TraesCS2A01G585300 chr2D 96.748 123 4 0 3105 3227 651490322 651490444 5.020000e-49 206.0
32 TraesCS2A01G585300 chr2D 94.030 134 8 0 3330 3463 651490455 651490588 1.810000e-48 204.0
33 TraesCS2A01G585300 chr2D 87.571 177 14 6 2924 3096 651421379 651421207 8.410000e-47 198.0
34 TraesCS2A01G585300 chr2D 78.746 287 36 11 3105 3377 651597571 651597846 6.590000e-38 169.0
35 TraesCS2A01G585300 chr2D 97.753 89 2 0 3527 3615 651598142 651598230 1.850000e-33 154.0
36 TraesCS2A01G585300 chr2D 92.308 104 8 0 2999 3102 651490175 651490278 8.590000e-32 148.0
37 TraesCS2A01G585300 chr2D 95.349 86 4 0 3530 3615 651490586 651490671 1.860000e-28 137.0
38 TraesCS2A01G585300 chr5B 79.991 2239 357 59 778 2964 703859467 703857268 0.000000e+00 1568.0
39 TraesCS2A01G585300 chr5B 79.862 1445 233 37 780 2201 703804899 703803490 0.000000e+00 1003.0
40 TraesCS2A01G585300 chr5B 84.346 428 58 7 1805 2224 699615001 699614575 9.920000e-111 411.0
41 TraesCS2A01G585300 chrUn 86.667 930 112 9 1058 1981 23720256 23719333 0.000000e+00 1020.0
42 TraesCS2A01G585300 chrUn 83.787 845 68 33 2136 2962 23719033 23718240 0.000000e+00 737.0
43 TraesCS2A01G585300 chrUn 94.413 179 10 0 2924 3102 23718222 23718044 3.770000e-70 276.0
44 TraesCS2A01G585300 chr4A 79.685 1398 228 36 780 2145 616700794 616702167 0.000000e+00 957.0
45 TraesCS2A01G585300 chr5D 81.019 1138 178 17 1091 2201 551409461 551408335 0.000000e+00 870.0
46 TraesCS2A01G585300 chr5D 92.875 393 26 2 744 1135 548473889 548473498 1.550000e-158 569.0
47 TraesCS2A01G585300 chr5D 96.667 60 2 0 1 60 431560346 431560405 2.440000e-17 100.0
48 TraesCS2A01G585300 chr3D 93.077 390 25 2 744 1132 68368833 68369221 1.550000e-158 569.0
49 TraesCS2A01G585300 chr3A 91.346 416 33 2 58 470 652780616 652780201 2.000000e-157 566.0
50 TraesCS2A01G585300 chr3A 90.534 412 35 3 58 466 717662775 717662365 3.370000e-150 542.0
51 TraesCS2A01G585300 chr6A 91.505 412 32 2 58 466 134493341 134493752 7.190000e-157 564.0
52 TraesCS2A01G585300 chr4D 92.621 393 27 2 744 1135 280248982 280248591 7.190000e-157 564.0
53 TraesCS2A01G585300 chr5A 91.304 414 30 4 58 466 688956261 688955849 9.310000e-156 560.0
54 TraesCS2A01G585300 chr5A 92.112 393 31 0 58 450 559041902 559041510 4.330000e-154 555.0
55 TraesCS2A01G585300 chr5A 90.998 411 34 2 59 466 522422300 522421890 5.600000e-153 551.0
56 TraesCS2A01G585300 chr5A 98.305 59 1 0 1 59 522423549 522423491 1.890000e-18 104.0
57 TraesCS2A01G585300 chr5A 98.276 58 1 0 1 58 559043167 559043110 6.780000e-18 102.0
58 TraesCS2A01G585300 chr5A 98.276 58 1 0 1 58 608423408 608423465 6.780000e-18 102.0
59 TraesCS2A01G585300 chr1A 90.361 415 36 3 58 469 491270752 491270339 3.370000e-150 542.0
60 TraesCS2A01G585300 chr1A 90.338 414 33 3 58 468 507912216 507911807 1.570000e-148 536.0
61 TraesCS2A01G585300 chr1A 96.610 59 2 0 1 59 442616840 442616782 8.770000e-17 99.0
62 TraesCS2A01G585300 chr1A 98.214 56 1 0 1 56 454531122 454531177 8.770000e-17 99.0
63 TraesCS2A01G585300 chr1A 96.610 59 2 0 1 59 491272016 491271958 8.770000e-17 99.0
64 TraesCS2A01G585300 chr1D 88.679 424 38 7 61 481 469096067 469095651 3.420000e-140 508.0
65 TraesCS2A01G585300 chr7D 98.214 56 1 0 1 56 46601882 46601937 8.770000e-17 99.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G585300 chr2A 776167748 776171583 3835 True 7084.000000 7084 100.0000 1 3836 1 chr2A.!!$R2 3835
1 TraesCS2A01G585300 chr2A 776212835 776215175 2340 False 2590.000000 2590 86.8220 681 3039 1 chr2A.!!$F1 2358
2 TraesCS2A01G585300 chr2B 781149477 781152862 3385 False 950.675000 3229 87.9035 559 3836 4 chr2B.!!$F1 3277
3 TraesCS2A01G585300 chr2B 780872027 780875372 3345 True 775.800000 2634 93.2784 573 3818 5 chr2B.!!$R2 3245
4 TraesCS2A01G585300 chr2B 780828363 780829667 1304 True 706.000000 1206 87.2715 1832 3096 2 chr2B.!!$R1 1264
5 TraesCS2A01G585300 chr2B 781082886 781085479 2593 True 600.600000 2095 87.0632 1359 3836 5 chr2B.!!$R3 2477
6 TraesCS2A01G585300 chr6D 69106506 69108763 2257 True 2542.000000 2542 87.3410 744 2965 1 chr6D.!!$R1 2221
7 TraesCS2A01G585300 chr6D 459062278 459064551 2273 True 863.000000 1604 83.8715 611 2964 2 chr6D.!!$R3 2353
8 TraesCS2A01G585300 chr2D 117631196 117633448 2252 False 2490.000000 2490 86.9660 744 2962 1 chr2D.!!$F2 2218
9 TraesCS2A01G585300 chr2D 651431451 651433689 2238 False 2440.000000 2440 86.5520 488 2720 1 chr2D.!!$F3 2232
10 TraesCS2A01G585300 chr2D 651421207 651422738 1531 True 831.500000 1465 87.2095 1650 3096 2 chr2D.!!$R1 1446
11 TraesCS2A01G585300 chr2D 651527876 651528542 666 False 398.000000 470 91.7780 3257 3836 2 chr2D.!!$F5 579
12 TraesCS2A01G585300 chr2D 651490175 651490966 791 False 215.200000 381 95.0702 2999 3836 5 chr2D.!!$F4 837
13 TraesCS2A01G585300 chr5B 703857268 703859467 2199 True 1568.000000 1568 79.9910 778 2964 1 chr5B.!!$R3 2186
14 TraesCS2A01G585300 chr5B 703803490 703804899 1409 True 1003.000000 1003 79.8620 780 2201 1 chr5B.!!$R2 1421
15 TraesCS2A01G585300 chrUn 23718044 23720256 2212 True 677.666667 1020 88.2890 1058 3102 3 chrUn.!!$R1 2044
16 TraesCS2A01G585300 chr4A 616700794 616702167 1373 False 957.000000 957 79.6850 780 2145 1 chr4A.!!$F1 1365
17 TraesCS2A01G585300 chr5D 551408335 551409461 1126 True 870.000000 870 81.0190 1091 2201 1 chr5D.!!$R2 1110
18 TraesCS2A01G585300 chr5A 559041510 559043167 1657 True 328.500000 555 95.1940 1 450 2 chr5A.!!$R3 449
19 TraesCS2A01G585300 chr5A 522421890 522423549 1659 True 327.500000 551 94.6515 1 466 2 chr5A.!!$R2 465
20 TraesCS2A01G585300 chr1A 491270339 491272016 1677 True 320.500000 542 93.4855 1 469 2 chr1A.!!$R3 468

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
257 2672 0.035534 ATTGTATGCCGGTGCTGACA 60.036 50.0 1.9 0.0 38.71 3.58 F
1404 3868 0.110056 GCACACTGGTTGATTCGCAG 60.110 55.0 0.0 0.0 0.00 5.18 F
1465 3929 0.238553 GCTTGAGTTCACCGGCTTTC 59.761 55.0 0.0 0.0 0.00 2.62 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1639 4103 0.622665 AGATTCCTGGCACTCCTTGG 59.377 55.0 0.0 0.0 0.00 3.61 R
2613 5346 0.673985 CATCCTCGCACCCGAAGATA 59.326 55.0 0.0 0.0 41.39 1.98 R
3314 6725 0.757935 ATGCCCATGCCATCCTGTTC 60.758 55.0 0.0 0.0 36.33 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
118 2533 2.751436 GTGTGCCGGCATGACCAT 60.751 61.111 35.23 0.00 39.03 3.55
128 2543 4.195334 ATGACCATGGGAGCCGCC 62.195 66.667 18.09 0.00 0.00 6.13
255 2670 2.779282 CATTGTATGCCGGTGCTGA 58.221 52.632 1.90 0.00 38.71 4.26
256 2671 0.378257 CATTGTATGCCGGTGCTGAC 59.622 55.000 1.90 0.00 38.71 3.51
257 2672 0.035534 ATTGTATGCCGGTGCTGACA 60.036 50.000 1.90 0.00 38.71 3.58
258 2673 0.035534 TTGTATGCCGGTGCTGACAT 60.036 50.000 1.90 0.00 38.71 3.06
259 2674 0.744057 TGTATGCCGGTGCTGACATG 60.744 55.000 1.90 0.00 38.71 3.21
260 2675 1.153188 TATGCCGGTGCTGACATGG 60.153 57.895 1.90 0.00 38.71 3.66
261 2676 1.909459 TATGCCGGTGCTGACATGGT 61.909 55.000 1.90 0.00 38.71 3.55
262 2677 3.434319 GCCGGTGCTGACATGGTG 61.434 66.667 1.90 0.00 33.53 4.17
263 2678 3.434319 CCGGTGCTGACATGGTGC 61.434 66.667 0.00 0.00 0.00 5.01
264 2679 3.434319 CGGTGCTGACATGGTGCC 61.434 66.667 0.00 0.00 0.00 5.01
265 2680 3.434319 GGTGCTGACATGGTGCCG 61.434 66.667 0.00 0.00 0.00 5.69
266 2681 3.434319 GTGCTGACATGGTGCCGG 61.434 66.667 0.00 0.00 0.00 6.13
269 2684 2.438975 CTGACATGGTGCCGGCAT 60.439 61.111 35.23 17.32 0.00 4.40
270 2685 2.751036 TGACATGGTGCCGGCATG 60.751 61.111 35.23 28.62 0.00 4.06
271 2686 2.438254 GACATGGTGCCGGCATGA 60.438 61.111 35.23 22.66 0.00 3.07
272 2687 2.438975 ACATGGTGCCGGCATGAG 60.439 61.111 35.23 23.95 0.00 2.90
273 2688 2.124612 CATGGTGCCGGCATGAGA 60.125 61.111 35.23 17.09 0.00 3.27
274 2689 2.124570 ATGGTGCCGGCATGAGAC 60.125 61.111 35.23 19.50 0.00 3.36
275 2690 2.970379 ATGGTGCCGGCATGAGACA 61.970 57.895 35.23 24.88 0.00 3.41
276 2691 2.124570 GGTGCCGGCATGAGACAT 60.125 61.111 35.23 0.00 0.00 3.06
277 2692 2.475466 GGTGCCGGCATGAGACATG 61.475 63.158 35.23 7.29 0.00 3.21
278 2693 2.124612 TGCCGGCATGAGACATGG 60.125 61.111 29.03 0.00 0.00 3.66
279 2694 2.124570 GCCGGCATGAGACATGGT 60.125 61.111 24.80 0.00 0.00 3.55
280 2695 2.182842 GCCGGCATGAGACATGGTC 61.183 63.158 24.80 0.00 0.00 4.02
281 2696 1.884464 CCGGCATGAGACATGGTCG 60.884 63.158 12.56 7.29 37.67 4.79
282 2697 2.528743 CGGCATGAGACATGGTCGC 61.529 63.158 12.56 0.00 37.67 5.19
283 2698 1.153289 GGCATGAGACATGGTCGCT 60.153 57.895 12.56 0.00 37.67 4.93
284 2699 1.434622 GGCATGAGACATGGTCGCTG 61.435 60.000 12.56 0.00 37.67 5.18
285 2700 0.460811 GCATGAGACATGGTCGCTGA 60.461 55.000 12.56 0.00 37.67 4.26
286 2701 1.284657 CATGAGACATGGTCGCTGAC 58.715 55.000 0.00 0.79 37.67 3.51
287 2702 0.897621 ATGAGACATGGTCGCTGACA 59.102 50.000 10.14 0.00 37.67 3.58
288 2703 0.897621 TGAGACATGGTCGCTGACAT 59.102 50.000 10.14 0.00 37.67 3.06
289 2704 1.284657 GAGACATGGTCGCTGACATG 58.715 55.000 10.14 9.58 37.67 3.21
290 2705 0.897621 AGACATGGTCGCTGACATGA 59.102 50.000 15.34 0.00 37.67 3.07
291 2706 1.483827 AGACATGGTCGCTGACATGAT 59.516 47.619 15.34 4.18 37.67 2.45
292 2707 2.093288 AGACATGGTCGCTGACATGATT 60.093 45.455 15.34 3.68 37.67 2.57
293 2708 2.011947 ACATGGTCGCTGACATGATTG 58.988 47.619 15.34 6.34 33.68 2.67
294 2709 1.332686 CATGGTCGCTGACATGATTGG 59.667 52.381 0.00 0.00 33.68 3.16
295 2710 1.026182 TGGTCGCTGACATGATTGGC 61.026 55.000 0.00 0.00 33.68 4.52
296 2711 1.718757 GGTCGCTGACATGATTGGCC 61.719 60.000 0.00 0.00 33.68 5.36
297 2712 1.815003 TCGCTGACATGATTGGCCG 60.815 57.895 0.00 0.00 0.00 6.13
298 2713 2.410469 GCTGACATGATTGGCCGC 59.590 61.111 0.00 0.00 33.72 6.53
299 2714 2.409055 GCTGACATGATTGGCCGCA 61.409 57.895 0.00 0.00 40.56 5.69
300 2715 1.725665 CTGACATGATTGGCCGCAG 59.274 57.895 0.00 0.00 0.00 5.18
339 2754 9.681692 TCAAAAGTTGAATGTAGACATGAAATG 57.318 29.630 0.00 0.00 43.37 2.32
348 2763 3.903783 CATGAAATGGGTCGGCGT 58.096 55.556 6.85 0.00 41.79 5.68
349 2764 1.429021 CATGAAATGGGTCGGCGTG 59.571 57.895 6.85 0.00 41.79 5.34
350 2765 1.002624 ATGAAATGGGTCGGCGTGT 60.003 52.632 6.85 0.00 0.00 4.49
351 2766 0.608035 ATGAAATGGGTCGGCGTGTT 60.608 50.000 6.85 0.00 0.00 3.32
352 2767 1.209127 GAAATGGGTCGGCGTGTTG 59.791 57.895 6.85 0.00 0.00 3.33
353 2768 2.195123 GAAATGGGTCGGCGTGTTGG 62.195 60.000 6.85 0.00 0.00 3.77
354 2769 2.684192 AAATGGGTCGGCGTGTTGGA 62.684 55.000 6.85 0.00 0.00 3.53
355 2770 3.894547 ATGGGTCGGCGTGTTGGAC 62.895 63.158 6.85 0.00 0.00 4.02
363 2778 2.126888 CGTGTTGGACGCATTGCC 60.127 61.111 2.41 0.00 42.21 4.52
364 2779 2.126888 GTGTTGGACGCATTGCCG 60.127 61.111 2.41 1.05 0.00 5.69
365 2780 2.281139 TGTTGGACGCATTGCCGA 60.281 55.556 2.41 0.00 0.00 5.54
366 2781 2.175811 GTTGGACGCATTGCCGAC 59.824 61.111 2.41 0.00 0.00 4.79
367 2782 3.053291 TTGGACGCATTGCCGACC 61.053 61.111 2.41 8.70 42.08 4.79
368 2783 3.545124 TTGGACGCATTGCCGACCT 62.545 57.895 17.08 0.00 42.19 3.85
369 2784 2.173758 TTGGACGCATTGCCGACCTA 62.174 55.000 17.08 10.62 42.19 3.08
370 2785 1.448893 GGACGCATTGCCGACCTAA 60.449 57.895 2.41 0.00 39.39 2.69
371 2786 1.022451 GGACGCATTGCCGACCTAAA 61.022 55.000 2.41 0.00 39.39 1.85
372 2787 1.014352 GACGCATTGCCGACCTAAAT 58.986 50.000 2.41 0.00 0.00 1.40
373 2788 0.732571 ACGCATTGCCGACCTAAATG 59.267 50.000 2.41 0.00 34.98 2.32
374 2789 3.256620 GCATTGCCGACCTAAATGC 57.743 52.632 0.00 4.07 46.50 3.56
376 2791 2.937469 CATTGCCGACCTAAATGCAA 57.063 45.000 0.00 0.00 46.51 4.08
377 2792 3.229276 CATTGCCGACCTAAATGCAAA 57.771 42.857 0.00 0.00 45.71 3.68
378 2793 3.583806 CATTGCCGACCTAAATGCAAAA 58.416 40.909 0.00 0.00 45.71 2.44
379 2794 2.715737 TGCCGACCTAAATGCAAAAC 57.284 45.000 0.00 0.00 0.00 2.43
380 2795 2.235016 TGCCGACCTAAATGCAAAACT 58.765 42.857 0.00 0.00 0.00 2.66
381 2796 3.413327 TGCCGACCTAAATGCAAAACTA 58.587 40.909 0.00 0.00 0.00 2.24
382 2797 3.821600 TGCCGACCTAAATGCAAAACTAA 59.178 39.130 0.00 0.00 0.00 2.24
383 2798 4.278669 TGCCGACCTAAATGCAAAACTAAA 59.721 37.500 0.00 0.00 0.00 1.85
384 2799 4.619760 GCCGACCTAAATGCAAAACTAAAC 59.380 41.667 0.00 0.00 0.00 2.01
385 2800 4.849383 CCGACCTAAATGCAAAACTAAACG 59.151 41.667 0.00 0.00 0.00 3.60
386 2801 4.849383 CGACCTAAATGCAAAACTAAACGG 59.151 41.667 0.00 0.00 0.00 4.44
387 2802 5.334260 CGACCTAAATGCAAAACTAAACGGA 60.334 40.000 0.00 0.00 0.00 4.69
388 2803 5.765176 ACCTAAATGCAAAACTAAACGGAC 58.235 37.500 0.00 0.00 0.00 4.79
389 2804 4.849383 CCTAAATGCAAAACTAAACGGACG 59.151 41.667 0.00 0.00 0.00 4.79
390 2805 2.325509 ATGCAAAACTAAACGGACGC 57.674 45.000 0.00 0.00 0.00 5.19
391 2806 0.308376 TGCAAAACTAAACGGACGCC 59.692 50.000 0.00 0.00 0.00 5.68
410 2825 3.618750 GACGGACGACCCACCCAA 61.619 66.667 0.00 0.00 34.14 4.12
411 2826 3.162858 ACGGACGACCCACCCAAA 61.163 61.111 0.00 0.00 34.14 3.28
412 2827 2.667199 CGGACGACCCACCCAAAC 60.667 66.667 0.00 0.00 34.14 2.93
413 2828 2.667199 GGACGACCCACCCAAACG 60.667 66.667 0.00 0.00 34.14 3.60
414 2829 2.422591 GACGACCCACCCAAACGA 59.577 61.111 0.00 0.00 0.00 3.85
415 2830 1.227615 GACGACCCACCCAAACGAA 60.228 57.895 0.00 0.00 0.00 3.85
416 2831 0.604511 GACGACCCACCCAAACGAAT 60.605 55.000 0.00 0.00 0.00 3.34
417 2832 0.686224 ACGACCCACCCAAACGAATA 59.314 50.000 0.00 0.00 0.00 1.75
418 2833 1.072015 ACGACCCACCCAAACGAATAA 59.928 47.619 0.00 0.00 0.00 1.40
419 2834 2.152830 CGACCCACCCAAACGAATAAA 58.847 47.619 0.00 0.00 0.00 1.40
420 2835 2.553172 CGACCCACCCAAACGAATAAAA 59.447 45.455 0.00 0.00 0.00 1.52
421 2836 3.004524 CGACCCACCCAAACGAATAAAAA 59.995 43.478 0.00 0.00 0.00 1.94
422 2837 4.552355 GACCCACCCAAACGAATAAAAAG 58.448 43.478 0.00 0.00 0.00 2.27
423 2838 3.243941 ACCCACCCAAACGAATAAAAAGC 60.244 43.478 0.00 0.00 0.00 3.51
424 2839 2.983803 CCACCCAAACGAATAAAAAGCG 59.016 45.455 0.00 0.00 0.00 4.68
425 2840 3.304794 CCACCCAAACGAATAAAAAGCGA 60.305 43.478 0.00 0.00 0.00 4.93
426 2841 4.291783 CACCCAAACGAATAAAAAGCGAA 58.708 39.130 0.00 0.00 0.00 4.70
427 2842 4.147479 CACCCAAACGAATAAAAAGCGAAC 59.853 41.667 0.00 0.00 0.00 3.95
428 2843 4.202030 ACCCAAACGAATAAAAAGCGAACA 60.202 37.500 0.00 0.00 0.00 3.18
429 2844 4.740695 CCCAAACGAATAAAAAGCGAACAA 59.259 37.500 0.00 0.00 0.00 2.83
430 2845 5.232414 CCCAAACGAATAAAAAGCGAACAAA 59.768 36.000 0.00 0.00 0.00 2.83
431 2846 6.074034 CCCAAACGAATAAAAAGCGAACAAAT 60.074 34.615 0.00 0.00 0.00 2.32
432 2847 6.785164 CCAAACGAATAAAAAGCGAACAAATG 59.215 34.615 0.00 0.00 0.00 2.32
433 2848 5.494863 ACGAATAAAAAGCGAACAAATGC 57.505 34.783 0.00 0.00 0.00 3.56
434 2849 4.087930 ACGAATAAAAAGCGAACAAATGCG 59.912 37.500 0.00 0.00 35.87 4.73
439 2854 2.869702 GCGAACAAATGCGCCGTC 60.870 61.111 4.18 0.00 46.93 4.79
440 2855 2.202298 CGAACAAATGCGCCGTCC 60.202 61.111 4.18 0.00 0.00 4.79
441 2856 2.202298 GAACAAATGCGCCGTCCG 60.202 61.111 4.18 0.00 40.75 4.79
442 2857 2.961669 GAACAAATGCGCCGTCCGT 61.962 57.895 4.18 0.00 39.71 4.69
443 2858 2.452366 GAACAAATGCGCCGTCCGTT 62.452 55.000 4.18 1.48 39.71 4.44
444 2859 2.065906 AACAAATGCGCCGTCCGTTT 62.066 50.000 4.18 0.00 39.71 3.60
445 2860 2.080062 CAAATGCGCCGTCCGTTTG 61.080 57.895 4.18 3.18 39.71 2.93
446 2861 3.262142 AAATGCGCCGTCCGTTTGG 62.262 57.895 4.18 0.00 39.71 3.28
453 2868 4.303993 CGTCCGTTTGGGTCCCGT 62.304 66.667 2.65 0.00 37.00 5.28
454 2869 2.111669 GTCCGTTTGGGTCCCGTT 59.888 61.111 2.65 0.00 37.00 4.44
455 2870 2.111460 TCCGTTTGGGTCCCGTTG 59.889 61.111 2.65 0.00 37.00 4.10
456 2871 2.981350 CCGTTTGGGTCCCGTTGG 60.981 66.667 2.65 0.00 0.00 3.77
457 2872 2.111460 CGTTTGGGTCCCGTTGGA 59.889 61.111 2.65 0.00 38.75 3.53
458 2873 1.964373 CGTTTGGGTCCCGTTGGAG 60.964 63.158 2.65 0.00 42.85 3.86
459 2874 1.149854 GTTTGGGTCCCGTTGGAGT 59.850 57.895 2.65 0.00 42.85 3.85
460 2875 0.466739 GTTTGGGTCCCGTTGGAGTT 60.467 55.000 2.65 0.00 42.85 3.01
461 2876 0.466555 TTTGGGTCCCGTTGGAGTTG 60.467 55.000 2.65 0.00 42.85 3.16
462 2877 2.671963 GGGTCCCGTTGGAGTTGC 60.672 66.667 0.00 0.00 42.85 4.17
463 2878 2.430367 GGTCCCGTTGGAGTTGCT 59.570 61.111 0.00 0.00 42.85 3.91
464 2879 1.671379 GGTCCCGTTGGAGTTGCTC 60.671 63.158 0.00 0.00 42.85 4.26
465 2880 1.371558 GTCCCGTTGGAGTTGCTCT 59.628 57.895 0.00 0.00 42.85 4.09
466 2881 0.250338 GTCCCGTTGGAGTTGCTCTT 60.250 55.000 0.00 0.00 42.85 2.85
467 2882 1.001633 GTCCCGTTGGAGTTGCTCTTA 59.998 52.381 0.00 0.00 42.85 2.10
468 2883 1.275291 TCCCGTTGGAGTTGCTCTTAG 59.725 52.381 0.00 0.00 35.03 2.18
469 2884 1.079503 CCGTTGGAGTTGCTCTTAGC 58.920 55.000 0.00 0.00 42.82 3.09
484 2899 6.221858 GCTCTTAGCAGTACATAGCAAATC 57.778 41.667 0.00 0.00 41.89 2.17
485 2900 5.178438 GCTCTTAGCAGTACATAGCAAATCC 59.822 44.000 0.00 0.00 41.89 3.01
486 2901 6.233905 TCTTAGCAGTACATAGCAAATCCA 57.766 37.500 0.00 0.00 0.00 3.41
498 2913 1.483415 GCAAATCCAATGCATCCACCT 59.517 47.619 0.00 0.00 43.29 4.00
501 2916 2.832643 ATCCAATGCATCCACCTTCA 57.167 45.000 0.00 0.00 0.00 3.02
513 2928 1.618343 CCACCTTCAAATCAACCACCC 59.382 52.381 0.00 0.00 0.00 4.61
519 2934 2.166829 TCAAATCAACCACCCAATCCG 58.833 47.619 0.00 0.00 0.00 4.18
527 2942 1.811266 CACCCAATCCGAGCTGACG 60.811 63.158 0.00 0.00 0.00 4.35
529 2944 1.330655 ACCCAATCCGAGCTGACGAT 61.331 55.000 0.00 0.00 35.09 3.73
530 2945 0.598680 CCCAATCCGAGCTGACGATC 60.599 60.000 0.00 0.00 35.09 3.69
536 2951 4.300457 GAGCTGACGATCGAGCTG 57.700 61.111 29.47 20.40 45.72 4.24
537 2952 1.724467 GAGCTGACGATCGAGCTGA 59.276 57.895 29.47 0.00 45.72 4.26
538 2953 0.591236 GAGCTGACGATCGAGCTGAC 60.591 60.000 29.47 16.00 45.72 3.51
539 2954 1.936880 GCTGACGATCGAGCTGACG 60.937 63.158 24.34 3.73 32.12 4.35
540 2955 1.716172 CTGACGATCGAGCTGACGA 59.284 57.895 24.34 0.00 46.04 4.20
555 2970 0.228238 GACGATCGATTTCAGCTGCG 59.772 55.000 24.34 7.01 0.00 5.18
557 2972 1.083784 GATCGATTTCAGCTGCGCG 60.084 57.895 9.47 0.00 0.00 6.86
581 2996 2.128507 GCGGGAATCGAGGAGGAGT 61.129 63.158 0.00 0.00 42.43 3.85
588 3006 1.934459 ATCGAGGAGGAGTTCGGGGA 61.934 60.000 0.00 0.00 37.42 4.81
601 3019 1.113517 TCGGGGAAGTCGGATCCATC 61.114 60.000 13.41 3.70 38.80 3.51
704 3123 0.608640 AGAAGCCACGACCTCGAAAT 59.391 50.000 0.78 0.00 43.02 2.17
733 3152 4.626081 GCCTGGGGCGCATATCGT 62.626 66.667 10.83 0.00 39.62 3.73
738 3157 2.430921 GGGCGCATATCGTCTCGG 60.431 66.667 10.83 0.00 43.48 4.63
739 3158 2.335369 GGCGCATATCGTCTCGGT 59.665 61.111 10.83 0.00 40.20 4.69
740 3159 1.299926 GGCGCATATCGTCTCGGTT 60.300 57.895 10.83 0.00 40.20 4.44
741 3160 1.276145 GGCGCATATCGTCTCGGTTC 61.276 60.000 10.83 0.00 40.20 3.62
742 3161 1.597700 GCGCATATCGTCTCGGTTCG 61.598 60.000 0.30 0.00 41.07 3.95
759 3183 4.561105 GGTTCGATTGATTCTAGCTAGGG 58.439 47.826 20.58 0.00 0.00 3.53
1090 3541 1.351350 GTAGTGCCCTCAAGGTCCTTT 59.649 52.381 0.00 0.00 38.26 3.11
1131 3585 1.277580 CCCCTCACCTGAGCTCCATT 61.278 60.000 12.15 0.00 40.75 3.16
1170 3624 2.753029 GTGAGCTTGGGCCAGACT 59.247 61.111 6.23 8.38 39.73 3.24
1198 3652 2.051334 TGAGTTTTGCATATCCCCGG 57.949 50.000 0.00 0.00 0.00 5.73
1247 3704 1.144708 TGTGATTGGGCAGGAGTTCAA 59.855 47.619 0.00 0.00 0.00 2.69
1399 3863 3.755378 GAGATTCTGCACACTGGTTGATT 59.245 43.478 0.00 0.00 0.00 2.57
1404 3868 0.110056 GCACACTGGTTGATTCGCAG 60.110 55.000 0.00 0.00 0.00 5.18
1428 3892 1.276138 ACACTCAAGATCGATGTGCCA 59.724 47.619 0.54 0.00 32.49 4.92
1457 3921 2.091852 CTCCAGGAGCTTGAGTTCAC 57.908 55.000 2.60 0.00 0.00 3.18
1465 3929 0.238553 GCTTGAGTTCACCGGCTTTC 59.761 55.000 0.00 0.00 0.00 2.62
1606 4070 3.563390 GCTCTATTCTAAAGCCAAGGCAG 59.437 47.826 14.40 2.10 44.88 4.85
1639 4103 3.782244 CGTTGAGCGACTGCCTGC 61.782 66.667 0.00 0.00 44.31 4.85
1721 4201 8.409358 AACTTAATTTCTGCTCACCACTTAAT 57.591 30.769 0.00 0.00 0.00 1.40
1895 4382 3.440522 TCGGTATCTTCAGTGAGTGTGAG 59.559 47.826 0.00 0.00 0.00 3.51
2119 4656 0.652592 GTAGTGCATACAAGCCGCAG 59.347 55.000 0.00 0.00 36.07 5.18
2140 4677 3.187227 AGTGTAATTTTGCAGCGAGACAG 59.813 43.478 0.00 0.00 0.00 3.51
2279 4946 7.973944 ACATGGCCGTCTTAATTAAAATTCTTC 59.026 33.333 0.00 0.00 0.00 2.87
2320 4991 9.893634 TGGTTAAAAGAAATACGAGGAATATGA 57.106 29.630 0.00 0.00 0.00 2.15
2539 5272 1.112113 ATGTATCAAGACGCCCGAGT 58.888 50.000 0.00 0.00 0.00 4.18
2601 5334 4.985538 AGGATTTGAAGCACCTGAACTTA 58.014 39.130 0.00 0.00 0.00 2.24
2606 5339 3.486383 TGAAGCACCTGAACTTAAAGGG 58.514 45.455 0.00 0.00 37.94 3.95
2613 5346 2.450476 CTGAACTTAAAGGGGCTGCAT 58.550 47.619 0.50 0.00 0.00 3.96
2721 5454 3.837146 TGTATGGTGAAAACCCATGCATT 59.163 39.130 0.00 0.00 46.09 3.56
2808 5681 3.054582 AGCAACTCACACATGGATCATCT 60.055 43.478 0.00 0.00 0.00 2.90
2826 5699 6.030548 TCATCTTCATCCGTGGAGATAATC 57.969 41.667 0.00 0.00 46.82 1.75
2855 5728 3.982730 TGATGGATATGGTCAGGGAATGT 59.017 43.478 0.00 0.00 0.00 2.71
2875 5748 8.643324 GGAATGTTAGTGGTCTCATAATACTCT 58.357 37.037 0.00 0.00 0.00 3.24
2904 5806 1.130749 CAGCAGCTTGAGCAATGACTC 59.869 52.381 5.70 0.00 45.16 3.36
3029 6216 9.415544 GATGCATGTTTTTCTCTTTCAGTTTAT 57.584 29.630 2.46 0.00 0.00 1.40
3030 6228 9.768662 ATGCATGTTTTTCTCTTTCAGTTTATT 57.231 25.926 0.00 0.00 0.00 1.40
3048 6246 6.542370 AGTTTATTGAGTAATTGCGCACCTAT 59.458 34.615 11.12 0.00 0.00 2.57
3157 6544 8.637986 ACCTTTTTGCTATGTGTTGAGAAATTA 58.362 29.630 0.00 0.00 0.00 1.40
3231 6618 1.197721 GGCGTTCTCTGTGTTTGGATG 59.802 52.381 0.00 0.00 0.00 3.51
3240 6627 3.134623 TCTGTGTTTGGATGTGACTGACT 59.865 43.478 0.00 0.00 0.00 3.41
3242 6629 3.206150 GTGTTTGGATGTGACTGACTGT 58.794 45.455 0.00 0.00 0.00 3.55
3243 6630 4.141824 TGTGTTTGGATGTGACTGACTGTA 60.142 41.667 0.00 0.00 0.00 2.74
3308 6719 1.154035 GCTCACGAAAAATGGCCGG 60.154 57.895 0.00 0.00 0.00 6.13
3309 6720 1.154035 CTCACGAAAAATGGCCGGC 60.154 57.895 21.18 21.18 0.00 6.13
3310 6721 1.861542 CTCACGAAAAATGGCCGGCA 61.862 55.000 30.85 15.30 0.00 5.69
3311 6722 1.444212 CACGAAAAATGGCCGGCAG 60.444 57.895 30.85 10.52 0.00 4.85
3312 6723 1.901464 ACGAAAAATGGCCGGCAGT 60.901 52.632 30.85 13.56 0.00 4.40
3313 6724 1.288752 CGAAAAATGGCCGGCAGTT 59.711 52.632 30.85 19.27 0.00 3.16
3314 6725 1.008361 CGAAAAATGGCCGGCAGTTG 61.008 55.000 30.85 6.25 0.00 3.16
3315 6726 0.316841 GAAAAATGGCCGGCAGTTGA 59.683 50.000 30.85 6.26 0.00 3.18
3316 6727 0.755686 AAAAATGGCCGGCAGTTGAA 59.244 45.000 30.85 6.18 0.00 2.69
3317 6728 0.033366 AAAATGGCCGGCAGTTGAAC 59.967 50.000 30.85 9.47 0.00 3.18
3318 6729 1.112315 AAATGGCCGGCAGTTGAACA 61.112 50.000 30.85 15.69 0.00 3.18
3319 6730 1.526575 AATGGCCGGCAGTTGAACAG 61.527 55.000 30.85 0.00 0.00 3.16
3320 6731 3.365265 GGCCGGCAGTTGAACAGG 61.365 66.667 30.85 0.00 0.00 4.00
3321 6732 2.281484 GCCGGCAGTTGAACAGGA 60.281 61.111 24.80 0.00 0.00 3.86
3322 6733 1.675641 GCCGGCAGTTGAACAGGAT 60.676 57.895 24.80 0.00 0.00 3.24
3323 6734 1.926511 GCCGGCAGTTGAACAGGATG 61.927 60.000 24.80 0.00 46.00 3.51
3324 6735 1.308069 CCGGCAGTTGAACAGGATGG 61.308 60.000 0.00 0.00 43.62 3.51
3325 6736 1.885871 GGCAGTTGAACAGGATGGC 59.114 57.895 0.00 0.00 43.62 4.40
3326 6737 0.895100 GGCAGTTGAACAGGATGGCA 60.895 55.000 0.00 0.00 43.62 4.92
3327 6738 1.180029 GCAGTTGAACAGGATGGCAT 58.820 50.000 0.00 0.00 43.62 4.40
3328 6739 1.135199 GCAGTTGAACAGGATGGCATG 60.135 52.381 3.81 0.00 43.62 4.06
3469 6880 0.610509 TTTGCATTAGCCGCCCTCAA 60.611 50.000 0.00 0.00 41.13 3.02
3523 6936 2.275380 GCACCCGGAGTTGCCAATT 61.275 57.895 0.73 0.00 35.94 2.32
3728 7339 4.640201 CACTAACCACAATATGACCCAAGG 59.360 45.833 0.00 0.00 0.00 3.61
3751 7362 4.323792 GGAGGACCATCATGAAGTCTTTCA 60.324 45.833 21.82 0.00 40.63 2.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
15 16 0.036388 GCACCACCCTCGAAGATGAA 60.036 55.000 0.00 0.00 33.89 2.57
128 2543 0.392863 TGGAGTTCGACCATGCCATG 60.393 55.000 0.00 0.00 32.03 3.66
129 2544 0.327924 TTGGAGTTCGACCATGCCAT 59.672 50.000 0.00 0.00 37.26 4.40
134 2549 0.613777 GGGACTTGGAGTTCGACCAT 59.386 55.000 0.00 0.00 37.26 3.55
255 2670 2.438975 CTCATGCCGGCACCATGT 60.439 61.111 35.50 13.69 40.63 3.21
256 2671 2.124612 TCTCATGCCGGCACCATG 60.125 61.111 35.50 26.75 41.03 3.66
257 2672 2.124570 GTCTCATGCCGGCACCAT 60.125 61.111 35.50 14.65 0.00 3.55
258 2673 2.970379 ATGTCTCATGCCGGCACCA 61.970 57.895 35.50 22.60 0.00 4.17
259 2674 2.124570 ATGTCTCATGCCGGCACC 60.125 61.111 35.50 17.52 0.00 5.01
260 2675 2.475466 CCATGTCTCATGCCGGCAC 61.475 63.158 35.50 19.90 0.00 5.01
261 2676 2.124612 CCATGTCTCATGCCGGCA 60.125 61.111 34.80 34.80 0.00 5.69
262 2677 2.124570 ACCATGTCTCATGCCGGC 60.125 61.111 22.73 22.73 0.00 6.13
263 2678 1.884464 CGACCATGTCTCATGCCGG 60.884 63.158 0.00 0.00 0.00 6.13
264 2679 2.528743 GCGACCATGTCTCATGCCG 61.529 63.158 13.72 13.72 0.00 5.69
265 2680 1.153289 AGCGACCATGTCTCATGCC 60.153 57.895 4.43 0.00 0.00 4.40
266 2681 0.460811 TCAGCGACCATGTCTCATGC 60.461 55.000 4.43 0.00 0.00 4.06
267 2682 1.284657 GTCAGCGACCATGTCTCATG 58.715 55.000 3.11 3.11 0.00 3.07
268 2683 0.897621 TGTCAGCGACCATGTCTCAT 59.102 50.000 6.30 0.00 0.00 2.90
269 2684 0.897621 ATGTCAGCGACCATGTCTCA 59.102 50.000 6.30 0.00 0.00 3.27
270 2685 1.134995 TCATGTCAGCGACCATGTCTC 60.135 52.381 10.80 0.00 0.00 3.36
271 2686 0.897621 TCATGTCAGCGACCATGTCT 59.102 50.000 10.80 0.00 0.00 3.41
272 2687 1.945387 ATCATGTCAGCGACCATGTC 58.055 50.000 10.80 0.00 0.00 3.06
273 2688 2.011947 CAATCATGTCAGCGACCATGT 58.988 47.619 10.80 0.00 0.00 3.21
274 2689 1.332686 CCAATCATGTCAGCGACCATG 59.667 52.381 6.30 6.29 0.00 3.66
275 2690 1.671979 CCAATCATGTCAGCGACCAT 58.328 50.000 6.30 0.00 0.00 3.55
276 2691 1.026182 GCCAATCATGTCAGCGACCA 61.026 55.000 6.30 0.00 0.00 4.02
277 2692 1.718757 GGCCAATCATGTCAGCGACC 61.719 60.000 0.00 0.00 0.00 4.79
278 2693 1.723870 GGCCAATCATGTCAGCGAC 59.276 57.895 0.00 2.32 0.00 5.19
279 2694 1.815003 CGGCCAATCATGTCAGCGA 60.815 57.895 2.24 0.00 0.00 4.93
280 2695 2.711311 CGGCCAATCATGTCAGCG 59.289 61.111 2.24 0.00 0.00 5.18
281 2696 2.332362 CTGCGGCCAATCATGTCAGC 62.332 60.000 2.24 0.00 0.00 4.26
282 2697 1.721664 CCTGCGGCCAATCATGTCAG 61.722 60.000 2.24 0.00 0.00 3.51
283 2698 1.750018 CCTGCGGCCAATCATGTCA 60.750 57.895 2.24 0.00 0.00 3.58
284 2699 3.113745 CCTGCGGCCAATCATGTC 58.886 61.111 2.24 0.00 0.00 3.06
285 2700 3.142838 GCCTGCGGCCAATCATGT 61.143 61.111 2.24 0.00 44.06 3.21
313 2728 9.681692 CATTTCATGTCTACATTCAACTTTTGA 57.318 29.630 0.00 0.00 38.04 2.69
314 2729 8.918658 CCATTTCATGTCTACATTCAACTTTTG 58.081 33.333 0.00 0.00 33.61 2.44
315 2730 8.090214 CCCATTTCATGTCTACATTCAACTTTT 58.910 33.333 0.00 0.00 33.61 2.27
316 2731 7.233348 ACCCATTTCATGTCTACATTCAACTTT 59.767 33.333 0.00 0.00 33.61 2.66
317 2732 6.721208 ACCCATTTCATGTCTACATTCAACTT 59.279 34.615 0.00 0.00 33.61 2.66
318 2733 6.248433 ACCCATTTCATGTCTACATTCAACT 58.752 36.000 0.00 0.00 33.61 3.16
319 2734 6.515272 ACCCATTTCATGTCTACATTCAAC 57.485 37.500 0.00 0.00 33.61 3.18
320 2735 5.353956 CGACCCATTTCATGTCTACATTCAA 59.646 40.000 0.00 0.00 33.61 2.69
321 2736 4.875536 CGACCCATTTCATGTCTACATTCA 59.124 41.667 0.00 0.00 33.61 2.57
322 2737 4.273480 CCGACCCATTTCATGTCTACATTC 59.727 45.833 0.00 0.00 33.61 2.67
323 2738 4.199310 CCGACCCATTTCATGTCTACATT 58.801 43.478 0.00 0.00 33.61 2.71
324 2739 3.808728 CCGACCCATTTCATGTCTACAT 58.191 45.455 0.00 0.00 36.96 2.29
325 2740 2.679639 GCCGACCCATTTCATGTCTACA 60.680 50.000 0.00 0.00 0.00 2.74
326 2741 1.940613 GCCGACCCATTTCATGTCTAC 59.059 52.381 0.00 0.00 0.00 2.59
327 2742 1.472552 CGCCGACCCATTTCATGTCTA 60.473 52.381 0.00 0.00 0.00 2.59
328 2743 0.744414 CGCCGACCCATTTCATGTCT 60.744 55.000 0.00 0.00 0.00 3.41
329 2744 1.024579 ACGCCGACCCATTTCATGTC 61.025 55.000 0.00 0.00 0.00 3.06
330 2745 1.002624 ACGCCGACCCATTTCATGT 60.003 52.632 0.00 0.00 0.00 3.21
331 2746 1.305219 ACACGCCGACCCATTTCATG 61.305 55.000 0.00 0.00 0.00 3.07
332 2747 0.608035 AACACGCCGACCCATTTCAT 60.608 50.000 0.00 0.00 0.00 2.57
333 2748 1.228003 AACACGCCGACCCATTTCA 60.228 52.632 0.00 0.00 0.00 2.69
334 2749 1.209127 CAACACGCCGACCCATTTC 59.791 57.895 0.00 0.00 0.00 2.17
335 2750 2.265182 CCAACACGCCGACCCATTT 61.265 57.895 0.00 0.00 0.00 2.32
336 2751 2.671619 CCAACACGCCGACCCATT 60.672 61.111 0.00 0.00 0.00 3.16
337 2752 3.632080 TCCAACACGCCGACCCAT 61.632 61.111 0.00 0.00 0.00 4.00
338 2753 4.612412 GTCCAACACGCCGACCCA 62.612 66.667 0.00 0.00 0.00 4.51
347 2762 2.126888 CGGCAATGCGTCCAACAC 60.127 61.111 0.00 0.00 0.00 3.32
348 2763 2.281139 TCGGCAATGCGTCCAACA 60.281 55.556 0.00 0.00 0.00 3.33
349 2764 2.175811 GTCGGCAATGCGTCCAAC 59.824 61.111 0.00 0.00 0.00 3.77
350 2765 2.173758 TAGGTCGGCAATGCGTCCAA 62.174 55.000 12.59 0.00 0.00 3.53
351 2766 2.173758 TTAGGTCGGCAATGCGTCCA 62.174 55.000 12.59 0.00 0.00 4.02
352 2767 1.022451 TTTAGGTCGGCAATGCGTCC 61.022 55.000 0.00 1.43 0.00 4.79
353 2768 1.014352 ATTTAGGTCGGCAATGCGTC 58.986 50.000 0.00 0.00 0.00 5.19
354 2769 0.732571 CATTTAGGTCGGCAATGCGT 59.267 50.000 0.00 0.00 0.00 5.24
355 2770 0.592247 GCATTTAGGTCGGCAATGCG 60.592 55.000 7.65 0.00 42.41 4.73
356 2771 3.256620 GCATTTAGGTCGGCAATGC 57.743 52.632 7.65 7.65 44.36 3.56
357 2772 2.937469 TTGCATTTAGGTCGGCAATG 57.063 45.000 0.00 0.00 40.94 2.82
358 2773 3.258123 AGTTTTGCATTTAGGTCGGCAAT 59.742 39.130 0.00 0.00 44.70 3.56
359 2774 2.625790 AGTTTTGCATTTAGGTCGGCAA 59.374 40.909 0.00 0.00 43.79 4.52
360 2775 2.235016 AGTTTTGCATTTAGGTCGGCA 58.765 42.857 0.00 0.00 0.00 5.69
361 2776 4.428615 TTAGTTTTGCATTTAGGTCGGC 57.571 40.909 0.00 0.00 0.00 5.54
362 2777 4.849383 CGTTTAGTTTTGCATTTAGGTCGG 59.151 41.667 0.00 0.00 0.00 4.79
363 2778 4.849383 CCGTTTAGTTTTGCATTTAGGTCG 59.151 41.667 0.00 0.00 0.00 4.79
364 2779 5.854866 GTCCGTTTAGTTTTGCATTTAGGTC 59.145 40.000 0.00 0.00 0.00 3.85
365 2780 5.561339 CGTCCGTTTAGTTTTGCATTTAGGT 60.561 40.000 0.00 0.00 0.00 3.08
366 2781 4.849383 CGTCCGTTTAGTTTTGCATTTAGG 59.151 41.667 0.00 0.00 0.00 2.69
367 2782 4.319901 GCGTCCGTTTAGTTTTGCATTTAG 59.680 41.667 0.00 0.00 0.00 1.85
368 2783 4.220572 GCGTCCGTTTAGTTTTGCATTTA 58.779 39.130 0.00 0.00 0.00 1.40
369 2784 3.047093 GCGTCCGTTTAGTTTTGCATTT 58.953 40.909 0.00 0.00 0.00 2.32
370 2785 2.606065 GGCGTCCGTTTAGTTTTGCATT 60.606 45.455 0.00 0.00 0.00 3.56
371 2786 1.068816 GGCGTCCGTTTAGTTTTGCAT 60.069 47.619 0.00 0.00 0.00 3.96
372 2787 0.308376 GGCGTCCGTTTAGTTTTGCA 59.692 50.000 0.00 0.00 0.00 4.08
373 2788 0.723459 CGGCGTCCGTTTAGTTTTGC 60.723 55.000 9.69 0.00 42.73 3.68
374 2789 0.110554 CCGGCGTCCGTTTAGTTTTG 60.111 55.000 15.38 0.00 46.80 2.44
375 2790 0.249826 TCCGGCGTCCGTTTAGTTTT 60.250 50.000 15.38 0.00 46.80 2.43
376 2791 0.945743 GTCCGGCGTCCGTTTAGTTT 60.946 55.000 15.38 0.00 46.80 2.66
377 2792 1.373371 GTCCGGCGTCCGTTTAGTT 60.373 57.895 15.38 0.00 46.80 2.24
378 2793 2.259511 GTCCGGCGTCCGTTTAGT 59.740 61.111 15.38 0.00 46.80 2.24
379 2794 2.877582 CGTCCGGCGTCCGTTTAG 60.878 66.667 15.38 2.64 46.80 1.85
380 2795 4.418401 CCGTCCGGCGTCCGTTTA 62.418 66.667 15.38 0.67 46.80 2.01
393 2808 3.167822 TTTGGGTGGGTCGTCCGTC 62.168 63.158 0.00 0.00 38.76 4.79
394 2809 3.162858 TTTGGGTGGGTCGTCCGT 61.163 61.111 0.00 0.00 38.76 4.69
395 2810 2.667199 GTTTGGGTGGGTCGTCCG 60.667 66.667 0.00 0.00 38.76 4.79
396 2811 2.663423 TTCGTTTGGGTGGGTCGTCC 62.663 60.000 0.00 0.00 0.00 4.79
397 2812 0.604511 ATTCGTTTGGGTGGGTCGTC 60.605 55.000 0.00 0.00 0.00 4.20
398 2813 0.686224 TATTCGTTTGGGTGGGTCGT 59.314 50.000 0.00 0.00 0.00 4.34
399 2814 1.810959 TTATTCGTTTGGGTGGGTCG 58.189 50.000 0.00 0.00 0.00 4.79
400 2815 4.552355 CTTTTTATTCGTTTGGGTGGGTC 58.448 43.478 0.00 0.00 0.00 4.46
401 2816 3.243941 GCTTTTTATTCGTTTGGGTGGGT 60.244 43.478 0.00 0.00 0.00 4.51
402 2817 3.322369 GCTTTTTATTCGTTTGGGTGGG 58.678 45.455 0.00 0.00 0.00 4.61
403 2818 2.983803 CGCTTTTTATTCGTTTGGGTGG 59.016 45.455 0.00 0.00 0.00 4.61
404 2819 3.891324 TCGCTTTTTATTCGTTTGGGTG 58.109 40.909 0.00 0.00 0.00 4.61
405 2820 4.202030 TGTTCGCTTTTTATTCGTTTGGGT 60.202 37.500 0.00 0.00 0.00 4.51
406 2821 4.291783 TGTTCGCTTTTTATTCGTTTGGG 58.708 39.130 0.00 0.00 0.00 4.12
407 2822 5.874892 TTGTTCGCTTTTTATTCGTTTGG 57.125 34.783 0.00 0.00 0.00 3.28
408 2823 6.297410 GCATTTGTTCGCTTTTTATTCGTTTG 59.703 34.615 0.00 0.00 0.00 2.93
409 2824 6.351749 GCATTTGTTCGCTTTTTATTCGTTT 58.648 32.000 0.00 0.00 0.00 3.60
410 2825 5.386933 CGCATTTGTTCGCTTTTTATTCGTT 60.387 36.000 0.00 0.00 0.00 3.85
411 2826 4.087930 CGCATTTGTTCGCTTTTTATTCGT 59.912 37.500 0.00 0.00 0.00 3.85
412 2827 4.545547 CGCATTTGTTCGCTTTTTATTCG 58.454 39.130 0.00 0.00 0.00 3.34
413 2828 4.314820 GCGCATTTGTTCGCTTTTTATTC 58.685 39.130 0.30 0.00 46.92 1.75
414 2829 4.306417 GCGCATTTGTTCGCTTTTTATT 57.694 36.364 0.30 0.00 46.92 1.40
415 2830 3.970828 GCGCATTTGTTCGCTTTTTAT 57.029 38.095 0.30 0.00 46.92 1.40
423 2838 2.202298 GGACGGCGCATTTGTTCG 60.202 61.111 10.83 3.69 0.00 3.95
424 2839 2.202298 CGGACGGCGCATTTGTTC 60.202 61.111 10.83 0.00 0.00 3.18
425 2840 2.065906 AAACGGACGGCGCATTTGTT 62.066 50.000 10.83 3.94 0.00 2.83
426 2841 2.548295 AAACGGACGGCGCATTTGT 61.548 52.632 10.83 0.74 0.00 2.83
427 2842 2.080062 CAAACGGACGGCGCATTTG 61.080 57.895 10.83 9.01 0.00 2.32
428 2843 2.254051 CAAACGGACGGCGCATTT 59.746 55.556 10.83 0.00 0.00 2.32
429 2844 3.732892 CCAAACGGACGGCGCATT 61.733 61.111 10.83 0.00 0.00 3.56
436 2851 3.812865 AACGGGACCCAAACGGACG 62.813 63.158 12.15 0.00 34.64 4.79
437 2852 2.111669 AACGGGACCCAAACGGAC 59.888 61.111 12.15 0.00 34.64 4.79
438 2853 2.111460 CAACGGGACCCAAACGGA 59.889 61.111 12.15 0.00 34.64 4.69
439 2854 2.981350 CCAACGGGACCCAAACGG 60.981 66.667 12.15 0.74 35.59 4.44
440 2855 1.964373 CTCCAACGGGACCCAAACG 60.964 63.158 12.15 0.00 38.64 3.60
441 2856 0.466739 AACTCCAACGGGACCCAAAC 60.467 55.000 12.15 0.00 38.64 2.93
442 2857 0.466555 CAACTCCAACGGGACCCAAA 60.467 55.000 12.15 0.00 38.64 3.28
443 2858 1.149627 CAACTCCAACGGGACCCAA 59.850 57.895 12.15 0.00 38.64 4.12
444 2859 2.833227 CAACTCCAACGGGACCCA 59.167 61.111 12.15 0.00 38.64 4.51
445 2860 2.671963 GCAACTCCAACGGGACCC 60.672 66.667 0.00 0.00 38.64 4.46
446 2861 1.671379 GAGCAACTCCAACGGGACC 60.671 63.158 0.00 0.00 38.64 4.46
447 2862 0.250338 AAGAGCAACTCCAACGGGAC 60.250 55.000 0.00 0.00 38.64 4.46
448 2863 1.275291 CTAAGAGCAACTCCAACGGGA 59.725 52.381 0.00 0.00 42.29 5.14
449 2864 1.726853 CTAAGAGCAACTCCAACGGG 58.273 55.000 0.00 0.00 0.00 5.28
450 2865 1.079503 GCTAAGAGCAACTCCAACGG 58.920 55.000 0.00 0.00 41.89 4.44
461 2876 5.178438 GGATTTGCTATGTACTGCTAAGAGC 59.822 44.000 0.00 0.00 42.82 4.09
462 2877 6.283694 TGGATTTGCTATGTACTGCTAAGAG 58.716 40.000 0.00 0.00 0.00 2.85
463 2878 6.233905 TGGATTTGCTATGTACTGCTAAGA 57.766 37.500 0.00 0.00 0.00 2.10
464 2879 6.925610 TTGGATTTGCTATGTACTGCTAAG 57.074 37.500 0.00 0.00 0.00 2.18
465 2880 6.238731 GCATTGGATTTGCTATGTACTGCTAA 60.239 38.462 0.00 0.38 37.14 3.09
466 2881 5.239306 GCATTGGATTTGCTATGTACTGCTA 59.761 40.000 0.00 0.00 37.14 3.49
467 2882 4.037208 GCATTGGATTTGCTATGTACTGCT 59.963 41.667 0.00 0.00 37.14 4.24
468 2883 4.202040 TGCATTGGATTTGCTATGTACTGC 60.202 41.667 0.00 0.00 40.77 4.40
469 2884 5.503662 TGCATTGGATTTGCTATGTACTG 57.496 39.130 0.00 0.00 40.77 2.74
470 2885 5.242393 GGATGCATTGGATTTGCTATGTACT 59.758 40.000 0.00 0.00 40.77 2.73
471 2886 5.009911 TGGATGCATTGGATTTGCTATGTAC 59.990 40.000 0.00 0.00 40.77 2.90
472 2887 5.009911 GTGGATGCATTGGATTTGCTATGTA 59.990 40.000 0.00 0.00 40.77 2.29
473 2888 3.962063 TGGATGCATTGGATTTGCTATGT 59.038 39.130 0.00 0.00 40.77 2.29
474 2889 4.304110 GTGGATGCATTGGATTTGCTATG 58.696 43.478 0.00 0.00 40.77 2.23
475 2890 3.322828 GGTGGATGCATTGGATTTGCTAT 59.677 43.478 0.00 0.00 40.77 2.97
476 2891 2.694628 GGTGGATGCATTGGATTTGCTA 59.305 45.455 0.00 0.00 40.77 3.49
477 2892 1.483415 GGTGGATGCATTGGATTTGCT 59.517 47.619 0.00 0.00 40.77 3.91
478 2893 1.483415 AGGTGGATGCATTGGATTTGC 59.517 47.619 0.00 0.00 40.55 3.68
479 2894 3.196039 TGAAGGTGGATGCATTGGATTTG 59.804 43.478 0.00 0.00 0.00 2.32
480 2895 3.443052 TGAAGGTGGATGCATTGGATTT 58.557 40.909 0.00 0.00 0.00 2.17
481 2896 3.104519 TGAAGGTGGATGCATTGGATT 57.895 42.857 0.00 0.00 0.00 3.01
482 2897 2.832643 TGAAGGTGGATGCATTGGAT 57.167 45.000 0.00 0.00 0.00 3.41
483 2898 2.601240 TTGAAGGTGGATGCATTGGA 57.399 45.000 0.00 0.00 0.00 3.53
484 2899 3.196039 TGATTTGAAGGTGGATGCATTGG 59.804 43.478 0.00 0.00 0.00 3.16
485 2900 4.459390 TGATTTGAAGGTGGATGCATTG 57.541 40.909 0.00 0.00 0.00 2.82
486 2901 4.322953 GGTTGATTTGAAGGTGGATGCATT 60.323 41.667 0.00 0.00 0.00 3.56
498 2913 2.560542 CGGATTGGGTGGTTGATTTGAA 59.439 45.455 0.00 0.00 0.00 2.69
501 2916 2.446435 CTCGGATTGGGTGGTTGATTT 58.554 47.619 0.00 0.00 0.00 2.17
513 2928 0.029433 TCGATCGTCAGCTCGGATTG 59.971 55.000 15.94 0.00 36.72 2.67
519 2934 0.591236 GTCAGCTCGATCGTCAGCTC 60.591 60.000 23.93 13.14 44.47 4.09
529 2944 1.400494 TGAAATCGATCGTCAGCTCGA 59.600 47.619 15.94 0.00 46.84 4.04
530 2945 1.778026 CTGAAATCGATCGTCAGCTCG 59.222 52.381 20.15 4.61 37.35 5.03
534 2949 1.257415 GCAGCTGAAATCGATCGTCAG 59.743 52.381 24.62 24.62 41.44 3.51
535 2950 1.280982 GCAGCTGAAATCGATCGTCA 58.719 50.000 20.43 10.72 0.00 4.35
536 2951 0.228238 CGCAGCTGAAATCGATCGTC 59.772 55.000 20.43 6.12 0.00 4.20
537 2952 2.291843 CGCAGCTGAAATCGATCGT 58.708 52.632 20.43 0.00 0.00 3.73
557 2972 4.951963 CTCGATTCCCGCTCCGGC 62.952 72.222 0.00 0.00 46.86 6.13
564 2979 0.386113 GAACTCCTCCTCGATTCCCG 59.614 60.000 0.00 0.00 40.25 5.14
565 2980 0.386113 CGAACTCCTCCTCGATTCCC 59.614 60.000 0.00 0.00 37.23 3.97
566 2981 0.386113 CCGAACTCCTCCTCGATTCC 59.614 60.000 0.00 0.00 37.23 3.01
581 2996 0.689745 ATGGATCCGACTTCCCCGAA 60.690 55.000 7.39 0.00 31.87 4.30
642 3060 2.782222 GCCTGTGGCCGTCGATCTA 61.782 63.158 0.00 0.00 44.06 1.98
687 3106 1.134788 CCTATTTCGAGGTCGTGGCTT 60.135 52.381 0.00 0.00 40.80 4.35
733 3152 3.632604 AGCTAGAATCAATCGAACCGAGA 59.367 43.478 0.00 0.00 39.91 4.04
738 3157 5.203060 ACCCTAGCTAGAATCAATCGAAC 57.797 43.478 22.70 0.00 0.00 3.95
739 3158 5.362717 TGAACCCTAGCTAGAATCAATCGAA 59.637 40.000 22.70 0.00 0.00 3.71
740 3159 4.893524 TGAACCCTAGCTAGAATCAATCGA 59.106 41.667 22.70 0.00 0.00 3.59
741 3160 5.201713 TGAACCCTAGCTAGAATCAATCG 57.798 43.478 22.70 2.43 0.00 3.34
742 3161 6.168270 ACTGAACCCTAGCTAGAATCAATC 57.832 41.667 22.70 11.10 0.00 2.67
759 3183 0.245539 TCCCGACCGATTGACTGAAC 59.754 55.000 0.00 0.00 0.00 3.18
820 3244 2.496817 GCTGATTCCGTCCTCGCT 59.503 61.111 0.00 0.00 35.54 4.93
1090 3541 2.515854 AGACGTGTAGAAGCTGAGGAA 58.484 47.619 0.00 0.00 0.00 3.36
1170 3624 5.394443 GGATATGCAAAACTCAAGGCATTCA 60.394 40.000 3.12 0.00 43.97 2.57
1214 3668 0.749454 AATCACAATCTCGCAGCCCC 60.749 55.000 0.00 0.00 0.00 5.80
1229 3686 1.272092 CCTTGAACTCCTGCCCAATCA 60.272 52.381 0.00 0.00 0.00 2.57
1354 3818 0.835971 TTGAGGTGCCTGAGCCTACA 60.836 55.000 0.00 0.00 38.69 2.74
1388 3852 0.798776 GGACTGCGAATCAACCAGTG 59.201 55.000 3.50 0.00 39.72 3.66
1399 3863 0.969149 ATCTTGAGTGTGGACTGCGA 59.031 50.000 0.00 0.00 30.16 5.10
1404 3868 2.926200 CACATCGATCTTGAGTGTGGAC 59.074 50.000 0.00 0.00 37.20 4.02
1428 3892 2.518772 CTCCTGGAGCTCAGAGCAT 58.481 57.895 24.64 9.51 45.56 3.79
1471 3935 2.029904 GAGACAAGCTCAATCCGCGC 62.030 60.000 0.00 0.00 43.38 6.86
1485 3949 1.819288 CTAAGCTTCGGGACAGAGACA 59.181 52.381 0.00 0.00 0.00 3.41
1624 4088 3.474486 TTGGCAGGCAGTCGCTCAA 62.474 57.895 0.00 0.00 38.60 3.02
1632 4096 3.060615 GCACTCCTTGGCAGGCAG 61.061 66.667 0.00 0.00 40.58 4.85
1639 4103 0.622665 AGATTCCTGGCACTCCTTGG 59.377 55.000 0.00 0.00 0.00 3.61
1755 4235 5.105392 AGCTGAAGTTGGTAGAGAAGATGAG 60.105 44.000 0.00 0.00 0.00 2.90
1895 4382 2.169832 TAAACAGTGTCCAGCTCAGC 57.830 50.000 0.00 0.00 0.00 4.26
2119 4656 3.058914 ACTGTCTCGCTGCAAAATTACAC 60.059 43.478 0.00 0.00 0.00 2.90
2140 4677 2.237393 TTTTTGCCTTGCATGGACAC 57.763 45.000 22.21 5.38 38.76 3.67
2220 4878 1.605058 CCGGGCTCTCCTCTTTTCGA 61.605 60.000 0.00 0.00 0.00 3.71
2539 5272 1.000506 GTTGGTCTTCTCGGCACTGTA 59.999 52.381 0.00 0.00 0.00 2.74
2601 5334 1.477558 CCGAAGATATGCAGCCCCTTT 60.478 52.381 0.00 0.00 0.00 3.11
2606 5339 1.510480 GCACCCGAAGATATGCAGCC 61.510 60.000 0.00 0.00 38.00 4.85
2613 5346 0.673985 CATCCTCGCACCCGAAGATA 59.326 55.000 0.00 0.00 41.39 1.98
2721 5454 1.423541 AGGTTGGTGGCATCACAGTAA 59.576 47.619 0.00 0.00 45.32 2.24
2808 5681 5.305386 ACAGATGATTATCTCCACGGATGAA 59.695 40.000 0.00 0.00 41.71 2.57
2826 5699 5.001874 CCTGACCATATCCATCAACAGATG 58.998 45.833 0.00 0.00 39.07 2.90
2855 5728 6.265649 GCCTGAGAGTATTATGAGACCACTAA 59.734 42.308 0.00 0.00 0.00 2.24
3029 6216 4.137116 AGATAGGTGCGCAATTACTCAA 57.863 40.909 14.00 0.00 0.00 3.02
3030 6228 3.819564 AGATAGGTGCGCAATTACTCA 57.180 42.857 14.00 0.00 0.00 3.41
3102 6444 7.819900 ACAGATATTTTCTCTACAGTCAACCAC 59.180 37.037 0.00 0.00 29.93 4.16
3103 6445 7.907389 ACAGATATTTTCTCTACAGTCAACCA 58.093 34.615 0.00 0.00 29.93 3.67
3157 6544 2.735151 TGACCGTCTCCATGAGTATGT 58.265 47.619 0.00 0.00 32.21 2.29
3231 6618 3.202906 TGCAACCTTTACAGTCAGTCAC 58.797 45.455 0.00 0.00 0.00 3.67
3308 6719 1.135199 CATGCCATCCTGTTCAACTGC 60.135 52.381 0.00 0.00 0.00 4.40
3309 6720 1.475280 CCATGCCATCCTGTTCAACTG 59.525 52.381 0.00 0.00 0.00 3.16
3310 6721 1.617804 CCCATGCCATCCTGTTCAACT 60.618 52.381 0.00 0.00 0.00 3.16
3311 6722 0.819582 CCCATGCCATCCTGTTCAAC 59.180 55.000 0.00 0.00 0.00 3.18
3312 6723 0.971959 GCCCATGCCATCCTGTTCAA 60.972 55.000 0.00 0.00 0.00 2.69
3313 6724 1.380246 GCCCATGCCATCCTGTTCA 60.380 57.895 0.00 0.00 0.00 3.18
3314 6725 0.757935 ATGCCCATGCCATCCTGTTC 60.758 55.000 0.00 0.00 36.33 3.18
3315 6726 1.046472 CATGCCCATGCCATCCTGTT 61.046 55.000 0.00 0.00 36.33 3.16
3316 6727 1.456892 CATGCCCATGCCATCCTGT 60.457 57.895 0.00 0.00 36.33 4.00
3317 6728 3.455152 CATGCCCATGCCATCCTG 58.545 61.111 0.00 0.00 36.33 3.86
3325 6736 1.991121 AGATTACTGGCATGCCCATG 58.009 50.000 33.44 23.99 44.33 3.66
3326 6737 2.442878 TGTAGATTACTGGCATGCCCAT 59.557 45.455 33.44 23.05 44.33 4.00
3327 6738 1.843206 TGTAGATTACTGGCATGCCCA 59.157 47.619 33.44 19.88 42.79 5.36
3328 6739 2.158755 ACTGTAGATTACTGGCATGCCC 60.159 50.000 33.44 16.93 34.56 5.36
3469 6880 5.362430 TGGAATGCTACCTTTGAACACTTTT 59.638 36.000 0.00 0.00 0.00 2.27
3523 6936 6.518493 GGATACAACATAATAACGGAGGTCA 58.482 40.000 0.00 0.00 0.00 4.02
3728 7339 3.922171 AAGACTTCATGATGGTCCTCC 57.078 47.619 19.27 3.09 0.00 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.