Multiple sequence alignment - TraesCS2A01G583200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G583200 chr2A 100.000 2705 0 0 1 2705 775250279 775247575 0.000000e+00 4996.0
1 TraesCS2A01G583200 chr2A 82.177 1139 105 42 782 1853 775272864 775271757 0.000000e+00 889.0
2 TraesCS2A01G583200 chr2A 87.050 278 30 1 295 566 729555245 729554968 2.620000e-80 309.0
3 TraesCS2A01G583200 chr2A 86.691 278 31 3 295 566 743571926 743571649 1.220000e-78 303.0
4 TraesCS2A01G583200 chr2A 85.816 282 30 5 293 566 196508339 196508060 9.470000e-75 291.0
5 TraesCS2A01G583200 chr2A 85.461 282 34 2 294 569 738969506 738969226 1.230000e-73 287.0
6 TraesCS2A01G583200 chr2A 94.030 67 3 1 2125 2191 608252226 608252291 1.710000e-17 100.0
7 TraesCS2A01G583200 chr2B 88.435 1176 77 21 563 1707 785277690 785278837 0.000000e+00 1363.0
8 TraesCS2A01G583200 chr2B 83.419 977 73 34 782 1708 785270535 785271472 0.000000e+00 824.0
9 TraesCS2A01G583200 chr2B 93.581 296 18 1 1 296 785277400 785277694 8.890000e-120 440.0
10 TraesCS2A01G583200 chr2B 85.765 281 33 2 295 569 785739055 785739334 9.470000e-75 291.0
11 TraesCS2A01G583200 chr2B 100.000 48 0 0 1888 1935 785279441 785279488 3.710000e-14 89.8
12 TraesCS2A01G583200 chr2D 85.595 1312 115 40 559 1822 649585003 649586288 0.000000e+00 1308.0
13 TraesCS2A01G583200 chr2D 84.158 1193 96 37 782 1914 649564675 649565834 0.000000e+00 1070.0
14 TraesCS2A01G583200 chr2D 81.022 548 57 21 2188 2705 649586580 649587110 2.520000e-105 392.0
15 TraesCS2A01G583200 chr2D 86.547 223 22 5 2 217 649584731 649584952 3.480000e-59 239.0
16 TraesCS2A01G583200 chr2D 79.310 174 21 6 2035 2194 590937834 590938006 1.020000e-19 108.0
17 TraesCS2A01G583200 chr2D 92.537 67 4 1 2129 2195 57167702 57167767 7.970000e-16 95.3
18 TraesCS2A01G583200 chr2D 98.000 50 1 0 1979 2028 649586541 649586590 1.330000e-13 87.9
19 TraesCS2A01G583200 chr3D 87.636 275 28 1 295 563 590751754 590752028 5.620000e-82 315.0
20 TraesCS2A01G583200 chr3D 86.545 275 29 3 295 561 575736361 575736635 2.040000e-76 296.0
21 TraesCS2A01G583200 chr3D 81.319 182 22 8 1476 1654 481731993 481732165 1.310000e-28 137.0
22 TraesCS2A01G583200 chr7D 84.848 297 35 5 295 584 63396801 63397094 9.470000e-75 291.0
23 TraesCS2A01G583200 chr4D 85.121 289 34 4 288 569 501974327 501974613 1.230000e-73 287.0
24 TraesCS2A01G583200 chr7A 83.251 203 21 5 1463 1664 475962903 475962713 9.960000e-40 174.0
25 TraesCS2A01G583200 chr7A 78.182 165 24 8 2031 2185 682176716 682176878 7.970000e-16 95.3
26 TraesCS2A01G583200 chr7B 81.905 210 26 5 1455 1664 428483438 428483241 1.670000e-37 167.0
27 TraesCS2A01G583200 chr3B 79.902 204 29 8 1454 1654 643839676 643839870 3.630000e-29 139.0
28 TraesCS2A01G583200 chr3A 78.788 165 26 5 2031 2190 670750257 670750097 4.760000e-18 102.0
29 TraesCS2A01G583200 chr4B 95.161 62 3 0 2129 2190 147699410 147699471 6.160000e-17 99.0
30 TraesCS2A01G583200 chr5B 92.188 64 5 0 2130 2193 61148000 61147937 1.030000e-14 91.6
31 TraesCS2A01G583200 chr1B 91.045 67 5 1 2129 2195 569514557 569514622 3.710000e-14 89.8
32 TraesCS2A01G583200 chr5A 76.437 174 23 10 2031 2187 51793203 51793031 8.030000e-11 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G583200 chr2A 775247575 775250279 2704 True 4996.000000 4996 100.000000 1 2705 1 chr2A.!!$R5 2704
1 TraesCS2A01G583200 chr2A 775271757 775272864 1107 True 889.000000 889 82.177000 782 1853 1 chr2A.!!$R6 1071
2 TraesCS2A01G583200 chr2B 785270535 785271472 937 False 824.000000 824 83.419000 782 1708 1 chr2B.!!$F1 926
3 TraesCS2A01G583200 chr2B 785277400 785279488 2088 False 630.933333 1363 94.005333 1 1935 3 chr2B.!!$F3 1934
4 TraesCS2A01G583200 chr2D 649564675 649565834 1159 False 1070.000000 1070 84.158000 782 1914 1 chr2D.!!$F3 1132
5 TraesCS2A01G583200 chr2D 649584731 649587110 2379 False 506.725000 1308 87.791000 2 2705 4 chr2D.!!$F4 2703

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
446 453 0.028505 TACGAAGTCGCCATAGACGC 59.971 55.0 0.0 0.0 43.93 5.19 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2041 2778 0.241481 AAAGCTCAGTCGACCGAGAC 59.759 55.0 28.71 19.82 41.23 3.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
45 46 3.067742 GCTTGCTCTATGTGGCATTCAAT 59.932 43.478 0.00 0.00 38.30 2.57
49 50 3.382546 GCTCTATGTGGCATTCAATGGTT 59.617 43.478 0.00 0.00 0.00 3.67
79 80 4.640201 GGTCTAAGCATGAGTTTTGCCATA 59.360 41.667 0.00 0.00 41.06 2.74
161 168 1.561542 CTCACAGGCTCCTAACCCATT 59.438 52.381 0.00 0.00 0.00 3.16
214 221 1.201429 AGGGATGGGTCAGTGTGGTC 61.201 60.000 0.00 0.00 0.00 4.02
253 260 1.268352 GTGCATCAGCGGGTTTTGTTA 59.732 47.619 0.00 0.00 46.23 2.41
264 271 2.232696 GGGTTTTGTTATGTGGCGGATT 59.767 45.455 0.00 0.00 0.00 3.01
296 303 2.113139 CGGGCCAGGTGTCACTTT 59.887 61.111 4.39 0.00 0.00 2.66
297 304 1.528309 CGGGCCAGGTGTCACTTTT 60.528 57.895 4.39 0.00 0.00 2.27
298 305 1.106944 CGGGCCAGGTGTCACTTTTT 61.107 55.000 4.39 0.00 0.00 1.94
323 330 8.795786 TTTTGAACATTAGTACAGATGCAAAC 57.204 30.769 0.00 0.00 0.00 2.93
324 331 7.503521 TTGAACATTAGTACAGATGCAAACA 57.496 32.000 0.00 2.69 0.00 2.83
325 332 6.898041 TGAACATTAGTACAGATGCAAACAC 58.102 36.000 0.00 0.00 0.00 3.32
326 333 6.710295 TGAACATTAGTACAGATGCAAACACT 59.290 34.615 0.00 0.00 0.00 3.55
327 334 6.727824 ACATTAGTACAGATGCAAACACTC 57.272 37.500 0.00 0.00 0.00 3.51
328 335 6.230472 ACATTAGTACAGATGCAAACACTCA 58.770 36.000 0.00 0.00 0.00 3.41
329 336 6.881065 ACATTAGTACAGATGCAAACACTCAT 59.119 34.615 0.00 0.00 0.00 2.90
330 337 8.040727 ACATTAGTACAGATGCAAACACTCATA 58.959 33.333 0.00 0.00 0.00 2.15
331 338 7.827819 TTAGTACAGATGCAAACACTCATAC 57.172 36.000 0.00 0.00 0.00 2.39
332 339 5.793817 AGTACAGATGCAAACACTCATACA 58.206 37.500 0.00 0.00 0.00 2.29
333 340 6.409704 AGTACAGATGCAAACACTCATACAT 58.590 36.000 0.00 0.00 0.00 2.29
334 341 7.555965 AGTACAGATGCAAACACTCATACATA 58.444 34.615 0.00 0.00 0.00 2.29
335 342 6.668541 ACAGATGCAAACACTCATACATAC 57.331 37.500 0.00 0.00 0.00 2.39
336 343 5.291858 ACAGATGCAAACACTCATACATACG 59.708 40.000 0.00 0.00 0.00 3.06
337 344 4.271049 AGATGCAAACACTCATACATACGC 59.729 41.667 0.00 0.00 0.00 4.42
338 345 2.347150 TGCAAACACTCATACATACGCG 59.653 45.455 3.53 3.53 0.00 6.01
339 346 2.845764 GCAAACACTCATACATACGCGC 60.846 50.000 5.73 0.00 0.00 6.86
340 347 2.287393 AACACTCATACATACGCGCA 57.713 45.000 5.73 0.00 0.00 6.09
341 348 2.509052 ACACTCATACATACGCGCAT 57.491 45.000 5.73 0.00 0.00 4.73
342 349 3.636282 ACACTCATACATACGCGCATA 57.364 42.857 5.73 0.00 0.00 3.14
343 350 3.305964 ACACTCATACATACGCGCATAC 58.694 45.455 5.73 0.00 0.00 2.39
344 351 3.243267 ACACTCATACATACGCGCATACA 60.243 43.478 5.73 0.00 0.00 2.29
345 352 3.119628 CACTCATACATACGCGCATACAC 59.880 47.826 5.73 0.00 0.00 2.90
346 353 3.004419 ACTCATACATACGCGCATACACT 59.996 43.478 5.73 0.00 0.00 3.55
347 354 3.561503 TCATACATACGCGCATACACTC 58.438 45.455 5.73 0.00 0.00 3.51
348 355 3.003897 TCATACATACGCGCATACACTCA 59.996 43.478 5.73 0.00 0.00 3.41
349 356 1.556564 ACATACGCGCATACACTCAC 58.443 50.000 5.73 0.00 0.00 3.51
350 357 0.852777 CATACGCGCATACACTCACC 59.147 55.000 5.73 0.00 0.00 4.02
351 358 0.249322 ATACGCGCATACACTCACCC 60.249 55.000 5.73 0.00 0.00 4.61
352 359 2.287457 TACGCGCATACACTCACCCC 62.287 60.000 5.73 0.00 0.00 4.95
353 360 2.584608 GCGCATACACTCACCCCT 59.415 61.111 0.30 0.00 0.00 4.79
354 361 1.820581 GCGCATACACTCACCCCTA 59.179 57.895 0.30 0.00 0.00 3.53
355 362 0.393077 GCGCATACACTCACCCCTAT 59.607 55.000 0.30 0.00 0.00 2.57
356 363 1.873903 GCGCATACACTCACCCCTATG 60.874 57.143 0.30 0.00 0.00 2.23
357 364 1.686587 CGCATACACTCACCCCTATGA 59.313 52.381 0.00 0.00 0.00 2.15
358 365 2.102420 CGCATACACTCACCCCTATGAA 59.898 50.000 0.00 0.00 0.00 2.57
359 366 3.467803 GCATACACTCACCCCTATGAAC 58.532 50.000 0.00 0.00 0.00 3.18
360 367 3.717707 CATACACTCACCCCTATGAACG 58.282 50.000 0.00 0.00 0.00 3.95
361 368 0.249398 ACACTCACCCCTATGAACGC 59.751 55.000 0.00 0.00 0.00 4.84
362 369 0.249120 CACTCACCCCTATGAACGCA 59.751 55.000 0.00 0.00 0.00 5.24
363 370 0.249398 ACTCACCCCTATGAACGCAC 59.751 55.000 0.00 0.00 0.00 5.34
364 371 0.249120 CTCACCCCTATGAACGCACA 59.751 55.000 0.00 0.00 0.00 4.57
365 372 0.036765 TCACCCCTATGAACGCACAC 60.037 55.000 0.00 0.00 0.00 3.82
366 373 0.321210 CACCCCTATGAACGCACACA 60.321 55.000 0.00 0.00 0.00 3.72
367 374 0.321298 ACCCCTATGAACGCACACAC 60.321 55.000 0.00 0.00 0.00 3.82
368 375 1.358725 CCCCTATGAACGCACACACG 61.359 60.000 0.00 0.00 39.50 4.49
369 376 1.419922 CCTATGAACGCACACACGC 59.580 57.895 0.00 0.00 36.19 5.34
370 377 1.288419 CCTATGAACGCACACACGCA 61.288 55.000 0.00 0.00 36.19 5.24
371 378 0.179250 CTATGAACGCACACACGCAC 60.179 55.000 0.00 0.00 36.19 5.34
372 379 0.876342 TATGAACGCACACACGCACA 60.876 50.000 0.00 0.00 36.19 4.57
373 380 2.350760 GAACGCACACACGCACAC 60.351 61.111 0.00 0.00 36.19 3.82
374 381 3.783588 GAACGCACACACGCACACC 62.784 63.158 0.00 0.00 36.19 4.16
377 384 2.280524 GCACACACGCACACCCTA 60.281 61.111 0.00 0.00 0.00 3.53
378 385 1.671054 GCACACACGCACACCCTAT 60.671 57.895 0.00 0.00 0.00 2.57
379 386 1.635663 GCACACACGCACACCCTATC 61.636 60.000 0.00 0.00 0.00 2.08
380 387 1.019278 CACACACGCACACCCTATCC 61.019 60.000 0.00 0.00 0.00 2.59
381 388 1.449601 CACACGCACACCCTATCCC 60.450 63.158 0.00 0.00 0.00 3.85
382 389 1.612442 ACACGCACACCCTATCCCT 60.612 57.895 0.00 0.00 0.00 4.20
383 390 0.324923 ACACGCACACCCTATCCCTA 60.325 55.000 0.00 0.00 0.00 3.53
384 391 1.048601 CACGCACACCCTATCCCTAT 58.951 55.000 0.00 0.00 0.00 2.57
385 392 1.048601 ACGCACACCCTATCCCTATG 58.951 55.000 0.00 0.00 0.00 2.23
386 393 1.338107 CGCACACCCTATCCCTATGA 58.662 55.000 0.00 0.00 0.00 2.15
387 394 1.273606 CGCACACCCTATCCCTATGAG 59.726 57.143 0.00 0.00 0.00 2.90
388 395 1.002544 GCACACCCTATCCCTATGAGC 59.997 57.143 0.00 0.00 0.00 4.26
389 396 2.329267 CACACCCTATCCCTATGAGCA 58.671 52.381 0.00 0.00 0.00 4.26
390 397 2.037772 CACACCCTATCCCTATGAGCAC 59.962 54.545 0.00 0.00 0.00 4.40
391 398 1.625818 CACCCTATCCCTATGAGCACC 59.374 57.143 0.00 0.00 0.00 5.01
392 399 1.509961 ACCCTATCCCTATGAGCACCT 59.490 52.381 0.00 0.00 0.00 4.00
393 400 2.089925 ACCCTATCCCTATGAGCACCTT 60.090 50.000 0.00 0.00 0.00 3.50
394 401 2.569404 CCCTATCCCTATGAGCACCTTC 59.431 54.545 0.00 0.00 0.00 3.46
395 402 3.242867 CCTATCCCTATGAGCACCTTCA 58.757 50.000 0.00 0.00 0.00 3.02
396 403 3.648067 CCTATCCCTATGAGCACCTTCAA 59.352 47.826 0.00 0.00 0.00 2.69
397 404 3.853355 ATCCCTATGAGCACCTTCAAG 57.147 47.619 0.00 0.00 0.00 3.02
398 405 2.832838 TCCCTATGAGCACCTTCAAGA 58.167 47.619 0.00 0.00 0.00 3.02
399 406 2.768527 TCCCTATGAGCACCTTCAAGAG 59.231 50.000 0.00 0.00 0.00 2.85
400 407 2.768527 CCCTATGAGCACCTTCAAGAGA 59.231 50.000 0.00 0.00 0.00 3.10
401 408 3.431486 CCCTATGAGCACCTTCAAGAGAC 60.431 52.174 0.00 0.00 0.00 3.36
402 409 3.450457 CCTATGAGCACCTTCAAGAGACT 59.550 47.826 0.00 0.00 0.00 3.24
403 410 2.827800 TGAGCACCTTCAAGAGACTG 57.172 50.000 0.00 0.00 0.00 3.51
404 411 2.319844 TGAGCACCTTCAAGAGACTGA 58.680 47.619 0.00 0.00 0.00 3.41
405 412 2.298446 TGAGCACCTTCAAGAGACTGAG 59.702 50.000 0.00 0.00 0.00 3.35
406 413 1.001860 AGCACCTTCAAGAGACTGAGC 59.998 52.381 0.00 0.00 0.00 4.26
407 414 1.943507 GCACCTTCAAGAGACTGAGCC 60.944 57.143 0.00 0.00 0.00 4.70
408 415 1.345741 CACCTTCAAGAGACTGAGCCA 59.654 52.381 0.00 0.00 0.00 4.75
409 416 1.622811 ACCTTCAAGAGACTGAGCCAG 59.377 52.381 1.16 1.16 37.52 4.85
410 417 1.675415 CCTTCAAGAGACTGAGCCAGC 60.675 57.143 2.50 0.00 34.37 4.85
411 418 1.001746 CTTCAAGAGACTGAGCCAGCA 59.998 52.381 2.50 0.00 34.37 4.41
412 419 1.273759 TCAAGAGACTGAGCCAGCAT 58.726 50.000 2.50 0.00 34.37 3.79
413 420 1.066358 TCAAGAGACTGAGCCAGCATG 60.066 52.381 2.50 0.00 34.37 4.06
429 436 5.961395 CAGCATGGCATCTTGAAATTTAC 57.039 39.130 0.00 0.00 0.00 2.01
430 437 4.501559 CAGCATGGCATCTTGAAATTTACG 59.498 41.667 0.00 0.00 0.00 3.18
431 438 4.398988 AGCATGGCATCTTGAAATTTACGA 59.601 37.500 0.00 0.00 0.00 3.43
432 439 5.101628 GCATGGCATCTTGAAATTTACGAA 58.898 37.500 0.00 0.00 0.00 3.85
433 440 5.230726 GCATGGCATCTTGAAATTTACGAAG 59.769 40.000 0.00 0.00 0.00 3.79
435 442 5.938322 TGGCATCTTGAAATTTACGAAGTC 58.062 37.500 0.00 0.00 43.93 3.01
436 443 5.022021 GGCATCTTGAAATTTACGAAGTCG 58.978 41.667 0.00 0.00 43.93 4.18
437 444 4.492294 GCATCTTGAAATTTACGAAGTCGC 59.508 41.667 0.00 0.00 43.93 5.19
438 445 4.657075 TCTTGAAATTTACGAAGTCGCC 57.343 40.909 0.00 0.00 43.93 5.54
439 446 4.059511 TCTTGAAATTTACGAAGTCGCCA 58.940 39.130 0.00 0.00 43.93 5.69
440 447 4.693566 TCTTGAAATTTACGAAGTCGCCAT 59.306 37.500 0.00 0.00 43.93 4.40
441 448 5.870433 TCTTGAAATTTACGAAGTCGCCATA 59.130 36.000 0.00 0.00 43.93 2.74
442 449 5.712217 TGAAATTTACGAAGTCGCCATAG 57.288 39.130 0.00 0.00 43.93 2.23
443 450 5.412640 TGAAATTTACGAAGTCGCCATAGA 58.587 37.500 0.00 0.00 43.93 1.98
444 451 5.290158 TGAAATTTACGAAGTCGCCATAGAC 59.710 40.000 0.00 0.00 43.93 2.59
445 452 2.463553 TTACGAAGTCGCCATAGACG 57.536 50.000 0.00 0.00 43.93 4.18
446 453 0.028505 TACGAAGTCGCCATAGACGC 59.971 55.000 0.00 0.00 43.93 5.19
447 454 1.944676 CGAAGTCGCCATAGACGCC 60.945 63.158 0.00 0.00 45.26 5.68
448 455 1.437986 GAAGTCGCCATAGACGCCT 59.562 57.895 0.00 0.00 45.26 5.52
449 456 0.595310 GAAGTCGCCATAGACGCCTC 60.595 60.000 0.00 0.00 45.26 4.70
450 457 2.337749 AAGTCGCCATAGACGCCTCG 62.338 60.000 0.00 0.00 45.26 4.63
451 458 2.827190 TCGCCATAGACGCCTCGT 60.827 61.111 0.00 0.00 45.10 4.18
474 481 4.595538 ACGCGAACGCCCACTGAA 62.596 61.111 15.93 0.00 45.53 3.02
475 482 3.342627 CGCGAACGCCCACTGAAA 61.343 61.111 13.40 0.00 37.98 2.69
476 483 2.556287 GCGAACGCCCACTGAAAG 59.444 61.111 8.03 0.00 35.73 2.62
477 484 2.251642 GCGAACGCCCACTGAAAGT 61.252 57.895 8.03 0.00 41.69 2.66
487 494 2.787249 CTGAAAGTGCATCGCCGG 59.213 61.111 0.00 0.00 0.00 6.13
488 495 1.741401 CTGAAAGTGCATCGCCGGA 60.741 57.895 5.05 0.00 0.00 5.14
489 496 1.298157 CTGAAAGTGCATCGCCGGAA 61.298 55.000 5.05 0.00 0.00 4.30
490 497 0.886938 TGAAAGTGCATCGCCGGAAA 60.887 50.000 5.05 0.00 0.00 3.13
491 498 0.451783 GAAAGTGCATCGCCGGAAAT 59.548 50.000 5.05 0.00 0.00 2.17
492 499 0.887933 AAAGTGCATCGCCGGAAATT 59.112 45.000 5.05 0.00 0.00 1.82
493 500 0.451783 AAGTGCATCGCCGGAAATTC 59.548 50.000 5.05 0.00 0.00 2.17
494 501 0.392998 AGTGCATCGCCGGAAATTCT 60.393 50.000 5.05 0.00 0.00 2.40
495 502 1.134521 AGTGCATCGCCGGAAATTCTA 60.135 47.619 5.05 0.00 0.00 2.10
496 503 1.668751 GTGCATCGCCGGAAATTCTAA 59.331 47.619 5.05 0.00 0.00 2.10
497 504 2.096819 GTGCATCGCCGGAAATTCTAAA 59.903 45.455 5.05 0.00 0.00 1.85
498 505 2.750166 TGCATCGCCGGAAATTCTAAAA 59.250 40.909 5.05 0.00 0.00 1.52
499 506 3.380004 TGCATCGCCGGAAATTCTAAAAT 59.620 39.130 5.05 0.00 0.00 1.82
500 507 4.576873 TGCATCGCCGGAAATTCTAAAATA 59.423 37.500 5.05 0.00 0.00 1.40
501 508 5.066634 TGCATCGCCGGAAATTCTAAAATAA 59.933 36.000 5.05 0.00 0.00 1.40
502 509 5.974751 GCATCGCCGGAAATTCTAAAATAAA 59.025 36.000 5.05 0.00 0.00 1.40
503 510 6.640907 GCATCGCCGGAAATTCTAAAATAAAT 59.359 34.615 5.05 0.00 0.00 1.40
504 511 7.169140 GCATCGCCGGAAATTCTAAAATAAATT 59.831 33.333 5.05 0.00 0.00 1.82
505 512 8.690840 CATCGCCGGAAATTCTAAAATAAATTC 58.309 33.333 5.05 0.00 0.00 2.17
506 513 7.763356 TCGCCGGAAATTCTAAAATAAATTCA 58.237 30.769 5.05 0.00 0.00 2.57
507 514 7.913297 TCGCCGGAAATTCTAAAATAAATTCAG 59.087 33.333 5.05 0.00 0.00 3.02
508 515 7.913297 CGCCGGAAATTCTAAAATAAATTCAGA 59.087 33.333 5.05 0.00 0.00 3.27
509 516 9.581099 GCCGGAAATTCTAAAATAAATTCAGAA 57.419 29.630 5.05 0.00 0.00 3.02
521 528 9.585099 AAAATAAATTCAGAAATAATGCGAGCA 57.415 25.926 0.00 0.00 0.00 4.26
522 529 8.566008 AATAAATTCAGAAATAATGCGAGCAC 57.434 30.769 0.00 0.00 0.00 4.40
523 530 4.558538 ATTCAGAAATAATGCGAGCACC 57.441 40.909 0.00 0.00 0.00 5.01
524 531 2.984562 TCAGAAATAATGCGAGCACCA 58.015 42.857 0.00 0.00 0.00 4.17
525 532 3.342719 TCAGAAATAATGCGAGCACCAA 58.657 40.909 0.00 0.00 0.00 3.67
526 533 3.374988 TCAGAAATAATGCGAGCACCAAG 59.625 43.478 0.00 0.00 0.00 3.61
527 534 3.374988 CAGAAATAATGCGAGCACCAAGA 59.625 43.478 0.00 0.00 0.00 3.02
528 535 3.375299 AGAAATAATGCGAGCACCAAGAC 59.625 43.478 0.00 0.00 0.00 3.01
529 536 2.401583 ATAATGCGAGCACCAAGACA 57.598 45.000 0.00 0.00 0.00 3.41
530 537 2.401583 TAATGCGAGCACCAAGACAT 57.598 45.000 0.00 0.00 0.00 3.06
531 538 0.806868 AATGCGAGCACCAAGACATG 59.193 50.000 0.00 0.00 0.00 3.21
532 539 0.036105 ATGCGAGCACCAAGACATGA 60.036 50.000 0.00 0.00 0.00 3.07
533 540 0.250252 TGCGAGCACCAAGACATGAA 60.250 50.000 0.00 0.00 0.00 2.57
534 541 1.089920 GCGAGCACCAAGACATGAAT 58.910 50.000 0.00 0.00 0.00 2.57
535 542 1.063174 GCGAGCACCAAGACATGAATC 59.937 52.381 0.00 0.00 0.00 2.52
536 543 2.349590 CGAGCACCAAGACATGAATCA 58.650 47.619 0.00 0.00 0.00 2.57
537 544 2.941064 CGAGCACCAAGACATGAATCAT 59.059 45.455 0.00 0.00 0.00 2.45
538 545 3.242641 CGAGCACCAAGACATGAATCATG 60.243 47.826 20.58 20.58 46.18 3.07
539 546 3.943381 GAGCACCAAGACATGAATCATGA 59.057 43.478 27.86 0.00 43.81 3.07
540 547 4.533815 AGCACCAAGACATGAATCATGAT 58.466 39.130 27.86 13.87 43.81 2.45
541 548 4.338400 AGCACCAAGACATGAATCATGATG 59.662 41.667 27.86 20.71 43.81 3.07
542 549 4.499188 GCACCAAGACATGAATCATGATGG 60.499 45.833 27.86 28.02 43.81 3.51
543 550 4.037565 CACCAAGACATGAATCATGATGGG 59.962 45.833 30.43 25.08 43.81 4.00
544 551 3.005472 CCAAGACATGAATCATGATGGGC 59.995 47.826 27.86 11.94 43.81 5.36
545 552 3.878237 AGACATGAATCATGATGGGCT 57.122 42.857 27.86 13.69 43.81 5.19
546 553 4.987963 AGACATGAATCATGATGGGCTA 57.012 40.909 27.86 0.00 43.81 3.93
547 554 5.314718 AGACATGAATCATGATGGGCTAA 57.685 39.130 27.86 0.00 43.81 3.09
548 555 5.314529 AGACATGAATCATGATGGGCTAAG 58.685 41.667 27.86 0.00 43.81 2.18
549 556 5.072736 AGACATGAATCATGATGGGCTAAGA 59.927 40.000 27.86 0.00 43.81 2.10
550 557 5.698104 ACATGAATCATGATGGGCTAAGAA 58.302 37.500 27.86 0.00 43.81 2.52
551 558 6.312529 ACATGAATCATGATGGGCTAAGAAT 58.687 36.000 27.86 0.00 43.81 2.40
552 559 6.781014 ACATGAATCATGATGGGCTAAGAATT 59.219 34.615 27.86 0.00 43.81 2.17
553 560 6.889301 TGAATCATGATGGGCTAAGAATTC 57.111 37.500 9.46 0.00 0.00 2.17
554 561 5.771666 TGAATCATGATGGGCTAAGAATTCC 59.228 40.000 9.46 0.00 0.00 3.01
555 562 4.794311 TCATGATGGGCTAAGAATTCCA 57.206 40.909 0.65 0.00 0.00 3.53
556 563 4.464008 TCATGATGGGCTAAGAATTCCAC 58.536 43.478 0.65 0.00 31.48 4.02
557 564 4.166725 TCATGATGGGCTAAGAATTCCACT 59.833 41.667 0.65 0.00 31.48 4.00
558 565 3.889815 TGATGGGCTAAGAATTCCACTG 58.110 45.455 0.65 0.00 31.48 3.66
559 566 3.266772 TGATGGGCTAAGAATTCCACTGT 59.733 43.478 0.65 0.00 31.48 3.55
560 567 3.350219 TGGGCTAAGAATTCCACTGTC 57.650 47.619 0.65 0.00 0.00 3.51
561 568 2.026262 TGGGCTAAGAATTCCACTGTCC 60.026 50.000 0.65 2.16 0.00 4.02
562 569 2.644676 GGCTAAGAATTCCACTGTCCC 58.355 52.381 0.65 0.00 0.00 4.46
563 570 2.026262 GGCTAAGAATTCCACTGTCCCA 60.026 50.000 0.65 0.00 0.00 4.37
564 571 3.010420 GCTAAGAATTCCACTGTCCCAC 58.990 50.000 0.65 0.00 0.00 4.61
565 572 3.307762 GCTAAGAATTCCACTGTCCCACT 60.308 47.826 0.65 0.00 0.00 4.00
566 573 3.884037 AAGAATTCCACTGTCCCACTT 57.116 42.857 0.65 0.00 0.00 3.16
598 606 3.093717 TCCACGCTTCCGATCTATTTC 57.906 47.619 0.00 0.00 38.29 2.17
632 642 3.181475 CGGTGCCTCTAACTGATATGTGT 60.181 47.826 0.00 0.00 0.00 3.72
655 667 2.440409 CCAACCTGTCAGAATCAAGGG 58.560 52.381 0.00 0.00 0.00 3.95
656 668 2.040278 CCAACCTGTCAGAATCAAGGGA 59.960 50.000 0.00 0.00 0.00 4.20
665 677 6.720309 TGTCAGAATCAAGGGAATATGACAA 58.280 36.000 7.52 0.00 38.50 3.18
691 703 1.216427 GGGGCTCCTTTCCTTGATGAT 59.784 52.381 0.00 0.00 0.00 2.45
692 704 2.358615 GGGGCTCCTTTCCTTGATGATT 60.359 50.000 0.00 0.00 0.00 2.57
693 705 3.369175 GGGCTCCTTTCCTTGATGATTT 58.631 45.455 0.00 0.00 0.00 2.17
694 706 3.771479 GGGCTCCTTTCCTTGATGATTTT 59.229 43.478 0.00 0.00 0.00 1.82
695 707 4.223700 GGGCTCCTTTCCTTGATGATTTTT 59.776 41.667 0.00 0.00 0.00 1.94
759 780 1.450312 AGCTACCATGCAAGACCGC 60.450 57.895 0.00 0.00 34.99 5.68
881 940 0.878416 ACACGCACACAACAAACACT 59.122 45.000 0.00 0.00 0.00 3.55
1104 1200 0.678395 CCATATCAGCTGCGTCCTCT 59.322 55.000 9.47 0.00 0.00 3.69
1187 1283 3.052082 CCGCAGCAGTGTGAAGGG 61.052 66.667 0.00 0.00 36.14 3.95
1197 1293 4.097361 GTGAAGGGGGAGGCGTCC 62.097 72.222 17.33 17.33 43.05 4.79
1199 1295 3.009714 GAAGGGGGAGGCGTCCTT 61.010 66.667 23.90 11.44 43.36 3.36
1241 1343 2.501128 CAGGACCCGCGTGATCAT 59.499 61.111 4.92 0.00 34.35 2.45
1248 1350 1.449423 CCGCGTGATCATGAACCCA 60.449 57.895 19.30 0.00 0.00 4.51
1266 1377 2.257371 GCCTACTGCGACGACACA 59.743 61.111 0.00 0.00 0.00 3.72
1272 1383 3.971453 CTGCGACGACACAGCCGAT 62.971 63.158 0.00 0.00 0.00 4.18
1274 1385 1.515519 GCGACGACACAGCCGATAA 60.516 57.895 0.00 0.00 0.00 1.75
1291 1402 0.335361 TAACTCCTTCCTCTCCGCCT 59.665 55.000 0.00 0.00 0.00 5.52
1305 1416 2.762043 GCCTCCGGCTCCTCTTCT 60.762 66.667 0.00 0.00 46.69 2.85
1308 1419 3.077556 TCCGGCTCCTCTTCTGCC 61.078 66.667 0.00 0.00 42.94 4.85
1347 1473 4.292178 GAGCCGGAGCCCTCGATG 62.292 72.222 5.05 0.00 41.25 3.84
1350 1476 3.917760 CCGGAGCCCTCGATGGAC 61.918 72.222 11.34 3.59 38.35 4.02
1488 1629 4.521062 GCGCTGGCCATCGACTCT 62.521 66.667 31.76 0.00 0.00 3.24
1605 1749 3.081409 CTGGGGTGGTACCTCCGG 61.081 72.222 23.46 17.28 38.22 5.14
1781 1969 1.227380 GGCATCAGCGATTCGACCT 60.227 57.895 10.88 0.00 43.41 3.85
1795 1983 1.964223 TCGACCTAGATGGATTGAGCC 59.036 52.381 0.00 0.00 39.71 4.70
1838 2027 2.223548 TGTGTTTGTTGAGAGCATGCAC 60.224 45.455 21.98 14.59 0.00 4.57
1853 2042 4.072913 CACGCGTGCCTGTACTAG 57.927 61.111 28.16 0.00 0.00 2.57
1855 2044 0.448990 CACGCGTGCCTGTACTAGTA 59.551 55.000 28.16 0.00 0.00 1.82
1935 2672 1.566211 ATCGCCAGCCAGCTAGATAT 58.434 50.000 0.00 0.00 0.00 1.63
1936 2673 0.605083 TCGCCAGCCAGCTAGATATG 59.395 55.000 0.00 0.00 0.00 1.78
1937 2674 0.390866 CGCCAGCCAGCTAGATATGG 60.391 60.000 0.00 0.00 39.73 2.74
1938 2675 0.689623 GCCAGCCAGCTAGATATGGT 59.310 55.000 9.89 0.00 38.91 3.55
1939 2676 1.072965 GCCAGCCAGCTAGATATGGTT 59.927 52.381 9.89 2.66 38.91 3.67
1940 2677 2.775890 CCAGCCAGCTAGATATGGTTG 58.224 52.381 14.84 14.84 44.70 3.77
1943 2680 4.989875 AGCCAGCTAGATATGGTTGAAT 57.010 40.909 9.89 0.00 38.91 2.57
1945 2682 6.439636 AGCCAGCTAGATATGGTTGAATTA 57.560 37.500 9.89 0.00 38.91 1.40
1946 2683 7.025520 AGCCAGCTAGATATGGTTGAATTAT 57.974 36.000 9.89 0.00 38.91 1.28
1947 2684 7.465116 AGCCAGCTAGATATGGTTGAATTATT 58.535 34.615 9.89 0.00 38.91 1.40
1948 2685 7.946776 AGCCAGCTAGATATGGTTGAATTATTT 59.053 33.333 9.89 0.00 38.91 1.40
1949 2686 8.025445 GCCAGCTAGATATGGTTGAATTATTTG 58.975 37.037 9.89 0.00 38.91 2.32
1950 2687 9.288576 CCAGCTAGATATGGTTGAATTATTTGA 57.711 33.333 0.00 0.00 0.00 2.69
1960 2697 9.687210 ATGGTTGAATTATTTGATGATTCGATG 57.313 29.630 0.00 0.00 37.89 3.84
1961 2698 8.136800 TGGTTGAATTATTTGATGATTCGATGG 58.863 33.333 0.00 0.00 37.89 3.51
1962 2699 8.352201 GGTTGAATTATTTGATGATTCGATGGA 58.648 33.333 0.00 0.00 37.89 3.41
1963 2700 9.390795 GTTGAATTATTTGATGATTCGATGGAG 57.609 33.333 0.00 0.00 37.89 3.86
1964 2701 8.681486 TGAATTATTTGATGATTCGATGGAGT 57.319 30.769 0.00 0.00 37.89 3.85
1965 2702 8.562052 TGAATTATTTGATGATTCGATGGAGTG 58.438 33.333 0.00 0.00 37.89 3.51
1966 2703 4.825546 ATTTGATGATTCGATGGAGTGC 57.174 40.909 0.00 0.00 0.00 4.40
1967 2704 3.548745 TTGATGATTCGATGGAGTGCT 57.451 42.857 0.00 0.00 0.00 4.40
1968 2705 4.670896 TTGATGATTCGATGGAGTGCTA 57.329 40.909 0.00 0.00 0.00 3.49
1969 2706 3.982475 TGATGATTCGATGGAGTGCTAC 58.018 45.455 0.00 0.00 0.00 3.58
1970 2707 2.492019 TGATTCGATGGAGTGCTACG 57.508 50.000 0.00 0.00 0.00 3.51
1971 2708 1.749063 TGATTCGATGGAGTGCTACGT 59.251 47.619 0.00 0.00 0.00 3.57
1972 2709 2.946990 TGATTCGATGGAGTGCTACGTA 59.053 45.455 0.00 0.00 0.00 3.57
1973 2710 2.838386 TTCGATGGAGTGCTACGTAC 57.162 50.000 0.00 0.00 0.00 3.67
1974 2711 0.654160 TCGATGGAGTGCTACGTACG 59.346 55.000 15.01 15.01 0.00 3.67
1975 2712 0.376152 CGATGGAGTGCTACGTACGT 59.624 55.000 25.98 25.98 0.00 3.57
1976 2713 1.594397 CGATGGAGTGCTACGTACGTA 59.406 52.381 25.41 25.41 0.00 3.57
2020 2757 2.364324 GAGTCCCATCATGTACCGCTAA 59.636 50.000 0.00 0.00 0.00 3.09
2021 2758 2.972713 AGTCCCATCATGTACCGCTAAT 59.027 45.455 0.00 0.00 0.00 1.73
2022 2759 4.157246 AGTCCCATCATGTACCGCTAATA 58.843 43.478 0.00 0.00 0.00 0.98
2023 2760 4.591498 AGTCCCATCATGTACCGCTAATAA 59.409 41.667 0.00 0.00 0.00 1.40
2024 2761 4.689345 GTCCCATCATGTACCGCTAATAAC 59.311 45.833 0.00 0.00 0.00 1.89
2025 2762 4.591498 TCCCATCATGTACCGCTAATAACT 59.409 41.667 0.00 0.00 0.00 2.24
2026 2763 5.776208 TCCCATCATGTACCGCTAATAACTA 59.224 40.000 0.00 0.00 0.00 2.24
2027 2764 6.439375 TCCCATCATGTACCGCTAATAACTAT 59.561 38.462 0.00 0.00 0.00 2.12
2028 2765 6.535150 CCCATCATGTACCGCTAATAACTATG 59.465 42.308 0.00 0.00 0.00 2.23
2029 2766 7.320399 CCATCATGTACCGCTAATAACTATGA 58.680 38.462 0.00 0.00 0.00 2.15
2030 2767 7.489435 CCATCATGTACCGCTAATAACTATGAG 59.511 40.741 0.00 0.00 0.00 2.90
2031 2768 6.920817 TCATGTACCGCTAATAACTATGAGG 58.079 40.000 0.00 0.00 0.00 3.86
2032 2769 6.492429 TCATGTACCGCTAATAACTATGAGGT 59.508 38.462 0.00 0.00 34.78 3.85
2033 2770 6.080648 TGTACCGCTAATAACTATGAGGTG 57.919 41.667 0.00 0.00 32.47 4.00
2034 2771 5.595542 TGTACCGCTAATAACTATGAGGTGT 59.404 40.000 0.00 0.00 32.47 4.16
2035 2772 4.945246 ACCGCTAATAACTATGAGGTGTG 58.055 43.478 0.00 0.00 0.00 3.82
2036 2773 4.202223 ACCGCTAATAACTATGAGGTGTGG 60.202 45.833 0.00 0.00 0.00 4.17
2037 2774 3.741344 CGCTAATAACTATGAGGTGTGGC 59.259 47.826 0.00 0.00 0.00 5.01
2038 2775 4.501571 CGCTAATAACTATGAGGTGTGGCT 60.502 45.833 0.00 0.00 0.00 4.75
2039 2776 5.278808 CGCTAATAACTATGAGGTGTGGCTA 60.279 44.000 0.00 0.00 0.00 3.93
2040 2777 6.159988 GCTAATAACTATGAGGTGTGGCTAG 58.840 44.000 0.00 0.00 0.00 3.42
2041 2778 5.552870 AATAACTATGAGGTGTGGCTAGG 57.447 43.478 0.00 0.00 0.00 3.02
2042 2779 2.552093 ACTATGAGGTGTGGCTAGGT 57.448 50.000 0.00 0.00 0.00 3.08
2043 2780 2.389715 ACTATGAGGTGTGGCTAGGTC 58.610 52.381 0.00 0.00 0.00 3.85
2044 2781 2.023888 ACTATGAGGTGTGGCTAGGTCT 60.024 50.000 0.00 0.00 0.00 3.85
2045 2782 1.490574 ATGAGGTGTGGCTAGGTCTC 58.509 55.000 0.00 0.00 0.00 3.36
2046 2783 0.965866 TGAGGTGTGGCTAGGTCTCG 60.966 60.000 0.00 0.00 0.00 4.04
2047 2784 1.668101 GAGGTGTGGCTAGGTCTCGG 61.668 65.000 0.00 0.00 0.00 4.63
2048 2785 1.982938 GGTGTGGCTAGGTCTCGGT 60.983 63.158 0.00 0.00 0.00 4.69
2049 2786 1.511768 GTGTGGCTAGGTCTCGGTC 59.488 63.158 0.00 0.00 0.00 4.79
2050 2787 2.044555 TGTGGCTAGGTCTCGGTCG 61.045 63.158 0.00 0.00 0.00 4.79
2051 2788 1.748122 GTGGCTAGGTCTCGGTCGA 60.748 63.158 0.00 0.00 0.00 4.20
2052 2789 1.748122 TGGCTAGGTCTCGGTCGAC 60.748 63.158 7.13 7.13 0.00 4.20
2053 2790 1.451747 GGCTAGGTCTCGGTCGACT 60.452 63.158 16.46 0.00 34.38 4.18
2054 2791 1.716826 GGCTAGGTCTCGGTCGACTG 61.717 65.000 18.66 18.66 34.38 3.51
2055 2792 0.743701 GCTAGGTCTCGGTCGACTGA 60.744 60.000 25.02 25.02 34.38 3.41
2057 2794 0.743701 TAGGTCTCGGTCGACTGAGC 60.744 60.000 38.42 32.16 46.39 4.26
2058 2795 2.041686 GGTCTCGGTCGACTGAGCT 61.042 63.158 38.42 0.00 46.39 4.09
2059 2796 1.587933 GGTCTCGGTCGACTGAGCTT 61.588 60.000 38.42 0.00 46.39 3.74
2060 2797 0.241481 GTCTCGGTCGACTGAGCTTT 59.759 55.000 38.42 0.00 46.39 3.51
2061 2798 1.467734 GTCTCGGTCGACTGAGCTTTA 59.532 52.381 38.42 24.47 46.39 1.85
2062 2799 2.095364 GTCTCGGTCGACTGAGCTTTAA 60.095 50.000 38.42 24.15 46.39 1.52
2063 2800 2.753452 TCTCGGTCGACTGAGCTTTAAT 59.247 45.455 38.42 0.00 46.39 1.40
2064 2801 3.109619 CTCGGTCGACTGAGCTTTAATC 58.890 50.000 34.82 5.78 41.86 1.75
2065 2802 2.490509 TCGGTCGACTGAGCTTTAATCA 59.509 45.455 23.11 0.00 40.48 2.57
2066 2803 3.057104 TCGGTCGACTGAGCTTTAATCAA 60.057 43.478 23.11 0.00 40.48 2.57
2067 2804 3.304559 CGGTCGACTGAGCTTTAATCAAG 59.695 47.826 20.01 0.00 40.48 3.02
2068 2805 4.246458 GGTCGACTGAGCTTTAATCAAGT 58.754 43.478 16.46 0.00 39.53 3.16
2069 2806 4.691216 GGTCGACTGAGCTTTAATCAAGTT 59.309 41.667 16.46 0.00 39.53 2.66
2070 2807 5.179555 GGTCGACTGAGCTTTAATCAAGTTT 59.820 40.000 16.46 0.00 39.53 2.66
2071 2808 6.300356 GTCGACTGAGCTTTAATCAAGTTTC 58.700 40.000 8.70 0.00 34.56 2.78
2072 2809 5.989168 TCGACTGAGCTTTAATCAAGTTTCA 59.011 36.000 0.00 0.00 34.56 2.69
2073 2810 6.146184 TCGACTGAGCTTTAATCAAGTTTCAG 59.854 38.462 12.67 12.67 44.13 3.02
2075 2812 7.195839 ACTGAGCTTTAATCAAGTTTCAGTC 57.804 36.000 13.52 0.00 46.06 3.51
2076 2813 6.767902 ACTGAGCTTTAATCAAGTTTCAGTCA 59.232 34.615 13.52 0.00 46.06 3.41
2077 2814 7.283127 ACTGAGCTTTAATCAAGTTTCAGTCAA 59.717 33.333 13.52 0.00 46.06 3.18
2078 2815 7.995289 TGAGCTTTAATCAAGTTTCAGTCAAA 58.005 30.769 0.00 0.00 34.56 2.69
2079 2816 8.632679 TGAGCTTTAATCAAGTTTCAGTCAAAT 58.367 29.630 0.00 0.00 34.56 2.32
2080 2817 8.807667 AGCTTTAATCAAGTTTCAGTCAAATG 57.192 30.769 0.00 0.00 34.56 2.32
2081 2818 8.632679 AGCTTTAATCAAGTTTCAGTCAAATGA 58.367 29.630 0.00 0.00 34.56 2.57
2082 2819 9.415544 GCTTTAATCAAGTTTCAGTCAAATGAT 57.584 29.630 0.00 0.00 34.56 2.45
2087 2824 9.683069 AATCAAGTTTCAGTCAAATGATACAAC 57.317 29.630 4.38 0.00 34.67 3.32
2088 2825 8.219546 TCAAGTTTCAGTCAAATGATACAACA 57.780 30.769 4.38 0.00 34.67 3.33
2089 2826 8.849168 TCAAGTTTCAGTCAAATGATACAACAT 58.151 29.630 4.38 0.00 34.67 2.71
2090 2827 8.908678 CAAGTTTCAGTCAAATGATACAACATG 58.091 33.333 4.38 0.00 34.67 3.21
2091 2828 8.169977 AGTTTCAGTCAAATGATACAACATGT 57.830 30.769 0.00 0.00 34.67 3.21
2092 2829 9.283768 AGTTTCAGTCAAATGATACAACATGTA 57.716 29.630 0.00 0.00 37.24 2.29
2093 2830 9.891828 GTTTCAGTCAAATGATACAACATGTAA 57.108 29.630 0.00 0.00 36.31 2.41
2095 2832 9.500785 TTCAGTCAAATGATACAACATGTAAGA 57.499 29.630 0.00 0.00 36.31 2.10
2096 2833 9.154847 TCAGTCAAATGATACAACATGTAAGAG 57.845 33.333 0.00 0.00 36.31 2.85
2097 2834 9.154847 CAGTCAAATGATACAACATGTAAGAGA 57.845 33.333 0.00 0.00 36.31 3.10
2098 2835 9.376075 AGTCAAATGATACAACATGTAAGAGAG 57.624 33.333 0.00 0.00 36.31 3.20
2099 2836 9.155975 GTCAAATGATACAACATGTAAGAGAGT 57.844 33.333 0.00 0.00 36.31 3.24
2150 2887 9.734984 TTTACATGGATATAGTATCGACTGAGA 57.265 33.333 0.00 0.00 36.28 3.27
2151 2888 7.618502 ACATGGATATAGTATCGACTGAGAC 57.381 40.000 0.00 0.00 36.28 3.36
2153 2890 7.885922 ACATGGATATAGTATCGACTGAGACTT 59.114 37.037 0.00 0.00 43.97 3.01
2154 2891 9.384764 CATGGATATAGTATCGACTGAGACTTA 57.615 37.037 0.00 0.00 43.97 2.24
2155 2892 9.961264 ATGGATATAGTATCGACTGAGACTTAA 57.039 33.333 0.00 0.00 43.97 1.85
2156 2893 9.217278 TGGATATAGTATCGACTGAGACTTAAC 57.783 37.037 0.00 0.00 43.97 2.01
2157 2894 8.382130 GGATATAGTATCGACTGAGACTTAACG 58.618 40.741 0.00 0.00 43.97 3.18
2158 2895 9.138062 GATATAGTATCGACTGAGACTTAACGA 57.862 37.037 0.00 0.00 43.97 3.85
2159 2896 7.783090 ATAGTATCGACTGAGACTTAACGAA 57.217 36.000 0.00 0.00 43.97 3.85
2160 2897 6.109320 AGTATCGACTGAGACTTAACGAAG 57.891 41.667 0.00 0.00 43.97 3.79
2161 2898 5.642919 AGTATCGACTGAGACTTAACGAAGT 59.357 40.000 0.00 0.00 43.97 3.01
2162 2899 6.183360 AGTATCGACTGAGACTTAACGAAGTC 60.183 42.308 9.35 9.35 43.97 3.01
2174 2911 7.035840 ACTTAACGAAGTCTTAGTCAAGTGA 57.964 36.000 12.20 0.00 45.00 3.41
2175 2912 7.140048 ACTTAACGAAGTCTTAGTCAAGTGAG 58.860 38.462 12.20 1.07 45.00 3.51
2176 2913 5.769484 AACGAAGTCTTAGTCAAGTGAGA 57.231 39.130 0.00 0.00 45.00 3.27
2177 2914 5.110940 ACGAAGTCTTAGTCAAGTGAGAC 57.889 43.478 0.00 2.41 29.74 3.36
2182 2919 6.262193 AGTCTTAGTCAAGTGAGACTTAGC 57.738 41.667 6.49 0.60 46.26 3.09
2183 2920 5.770663 AGTCTTAGTCAAGTGAGACTTAGCA 59.229 40.000 6.49 0.00 46.26 3.49
2184 2921 6.265649 AGTCTTAGTCAAGTGAGACTTAGCAA 59.734 38.462 6.49 0.00 46.26 3.91
2185 2922 6.584563 GTCTTAGTCAAGTGAGACTTAGCAAG 59.415 42.308 1.61 0.83 46.26 4.01
2186 2923 6.490381 TCTTAGTCAAGTGAGACTTAGCAAGA 59.510 38.462 1.61 3.04 46.26 3.02
2187 2924 4.877282 AGTCAAGTGAGACTTAGCAAGAC 58.123 43.478 3.37 0.00 46.26 3.01
2188 2925 4.586841 AGTCAAGTGAGACTTAGCAAGACT 59.413 41.667 3.37 0.00 46.26 3.24
2189 2926 4.683781 GTCAAGTGAGACTTAGCAAGACTG 59.316 45.833 5.85 0.00 36.03 3.51
2201 2938 9.887406 GACTTAGCAAGACTGATAACTATACTC 57.113 37.037 3.37 0.00 30.45 2.59
2217 2954 7.136822 ACTATACTCATCTGGCCAAATGTTA 57.863 36.000 18.57 11.44 0.00 2.41
2236 2973 5.577835 TGTTAGACATTGTTTTCACAGTGC 58.422 37.500 0.00 0.00 42.93 4.40
2251 2998 2.959030 ACAGTGCTGTGAGTGACTTCTA 59.041 45.455 3.80 0.00 43.11 2.10
2303 3050 8.861033 TTTCAATGAAATTCACTGAGTTTCAG 57.139 30.769 25.20 16.95 45.98 3.02
2307 3054 9.390795 CAATGAAATTCACTGAGTTTCAGTAAG 57.609 33.333 25.20 14.04 45.61 2.34
2321 3068 5.784578 TTCAGTAAGTTCAGCAGTCACTA 57.215 39.130 0.00 0.00 0.00 2.74
2362 3109 7.032580 AGTCAAAACATTTCAACAATGTCGAA 58.967 30.769 0.81 0.00 39.73 3.71
2365 3112 8.877779 TCAAAACATTTCAACAATGTCGAAAAT 58.122 25.926 3.45 0.05 39.73 1.82
2381 3128 9.859427 ATGTCGAAAATACACATGAATTCAAAT 57.141 25.926 13.09 0.17 29.36 2.32
2382 3129 9.689976 TGTCGAAAATACACATGAATTCAAATT 57.310 25.926 13.09 5.11 0.00 1.82
2438 3185 8.445275 AATTAAAGTGAAAATTTCGGCCTTTT 57.555 26.923 16.93 0.00 34.98 2.27
2451 3198 2.644992 CTTTTGGCCGTGGTGCTC 59.355 61.111 0.00 0.00 0.00 4.26
2454 3201 1.112315 TTTTGGCCGTGGTGCTCAAT 61.112 50.000 0.00 0.00 0.00 2.57
2457 3204 1.112315 TGGCCGTGGTGCTCAATTTT 61.112 50.000 0.00 0.00 0.00 1.82
2458 3205 0.388520 GGCCGTGGTGCTCAATTTTC 60.389 55.000 0.00 0.00 0.00 2.29
2461 3208 2.545742 GCCGTGGTGCTCAATTTTCTTT 60.546 45.455 0.00 0.00 0.00 2.52
2468 3215 6.019559 GTGGTGCTCAATTTTCTTTCTGAAAC 60.020 38.462 0.00 0.00 43.55 2.78
2471 3218 6.974622 GTGCTCAATTTTCTTTCTGAAACTGA 59.025 34.615 0.00 0.00 43.55 3.41
2475 3222 8.411318 TCAATTTTCTTTCTGAAACTGAAAGC 57.589 30.769 19.01 0.00 43.87 3.51
2479 3226 5.811399 TCTTTCTGAAACTGAAAGCGAAA 57.189 34.783 19.01 6.34 43.87 3.46
2480 3227 5.810525 TCTTTCTGAAACTGAAAGCGAAAG 58.189 37.500 19.01 0.00 43.87 2.62
2502 3254 1.906574 CTTGCTTCTGTACCCCTACCA 59.093 52.381 0.00 0.00 0.00 3.25
2508 3260 0.907704 CTGTACCCCTACCACTGCCA 60.908 60.000 0.00 0.00 0.00 4.92
2509 3261 1.196104 TGTACCCCTACCACTGCCAC 61.196 60.000 0.00 0.00 0.00 5.01
2511 3263 0.178885 TACCCCTACCACTGCCACTT 60.179 55.000 0.00 0.00 0.00 3.16
2513 3265 0.609131 CCCCTACCACTGCCACTTTG 60.609 60.000 0.00 0.00 0.00 2.77
2546 3298 1.991264 CTACGACGTCTTGTCTCGAGA 59.009 52.381 12.08 12.08 45.87 4.04
2549 3301 1.590205 CGACGTCTTGTCTCGAGATCG 60.590 57.143 19.90 17.25 45.87 3.69
2573 3325 0.620121 CTGCCTCTTCCTCCCCTTCT 60.620 60.000 0.00 0.00 0.00 2.85
2574 3326 0.178861 TGCCTCTTCCTCCCCTTCTT 60.179 55.000 0.00 0.00 0.00 2.52
2576 3328 1.903955 GCCTCTTCCTCCCCTTCTTCT 60.904 57.143 0.00 0.00 0.00 2.85
2577 3329 2.627217 GCCTCTTCCTCCCCTTCTTCTA 60.627 54.545 0.00 0.00 0.00 2.10
2579 3331 3.310288 CCTCTTCCTCCCCTTCTTCTACT 60.310 52.174 0.00 0.00 0.00 2.57
2580 3332 4.079096 CCTCTTCCTCCCCTTCTTCTACTA 60.079 50.000 0.00 0.00 0.00 1.82
2581 3333 4.869451 TCTTCCTCCCCTTCTTCTACTAC 58.131 47.826 0.00 0.00 0.00 2.73
2582 3334 4.544968 TCTTCCTCCCCTTCTTCTACTACT 59.455 45.833 0.00 0.00 0.00 2.57
2583 3335 5.735129 TCTTCCTCCCCTTCTTCTACTACTA 59.265 44.000 0.00 0.00 0.00 1.82
2585 3337 5.045140 TCCTCCCCTTCTTCTACTACTACT 58.955 45.833 0.00 0.00 0.00 2.57
2586 3338 5.495436 TCCTCCCCTTCTTCTACTACTACTT 59.505 44.000 0.00 0.00 0.00 2.24
2587 3339 5.829391 CCTCCCCTTCTTCTACTACTACTTC 59.171 48.000 0.00 0.00 0.00 3.01
2588 3340 6.398655 TCCCCTTCTTCTACTACTACTTCA 57.601 41.667 0.00 0.00 0.00 3.02
2589 3341 6.797707 TCCCCTTCTTCTACTACTACTTCAA 58.202 40.000 0.00 0.00 0.00 2.69
2591 3343 7.731688 TCCCCTTCTTCTACTACTACTTCAAAA 59.268 37.037 0.00 0.00 0.00 2.44
2592 3344 8.541234 CCCCTTCTTCTACTACTACTTCAAAAT 58.459 37.037 0.00 0.00 0.00 1.82
2623 3384 4.781934 ACTTGTTTCCCTGATATAGTGGC 58.218 43.478 0.00 0.00 0.00 5.01
2624 3385 4.227300 ACTTGTTTCCCTGATATAGTGGCA 59.773 41.667 0.00 0.00 0.00 4.92
2632 3393 1.344438 TGATATAGTGGCAAGCCCTCG 59.656 52.381 8.89 0.00 34.56 4.63
2642 3403 0.537188 CAAGCCCTCGCCTTCTTCTA 59.463 55.000 0.00 0.00 34.57 2.10
2654 3418 6.648192 TCGCCTTCTTCTACTACTACTACTT 58.352 40.000 0.00 0.00 0.00 2.24
2693 3457 2.168521 GTGAGGGATCGACTGATTGGAA 59.831 50.000 0.00 0.00 34.09 3.53
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 2.359981 ATGCCACATAGAGCAAGCAT 57.640 45.000 0.00 0.00 43.36 3.79
45 46 0.246635 GCTTAGACCGAGAGCAACCA 59.753 55.000 0.00 0.00 36.45 3.67
79 80 1.798813 GAAATTGCGAACGAGTGAGGT 59.201 47.619 0.00 0.00 0.00 3.85
132 137 1.344114 GGAGCCTGTGAGATGATCTCC 59.656 57.143 19.01 11.13 42.73 3.71
161 168 5.452496 CGAATCCCTATTTCTCTCTTGCTCA 60.452 44.000 0.00 0.00 0.00 4.26
227 234 3.129502 CCGCTGATGCACACCTGG 61.130 66.667 0.00 0.00 39.64 4.45
232 239 1.106351 ACAAAACCCGCTGATGCACA 61.106 50.000 0.00 0.00 39.64 4.57
297 304 9.243637 GTTTGCATCTGTACTAATGTTCAAAAA 57.756 29.630 9.01 2.73 0.00 1.94
298 305 8.409371 TGTTTGCATCTGTACTAATGTTCAAAA 58.591 29.630 9.01 4.39 0.00 2.44
299 306 7.860373 GTGTTTGCATCTGTACTAATGTTCAAA 59.140 33.333 9.01 8.66 0.00 2.69
300 307 7.228507 AGTGTTTGCATCTGTACTAATGTTCAA 59.771 33.333 9.01 4.47 0.00 2.69
301 308 6.710295 AGTGTTTGCATCTGTACTAATGTTCA 59.290 34.615 9.01 0.00 0.00 3.18
302 309 7.095229 TGAGTGTTTGCATCTGTACTAATGTTC 60.095 37.037 9.01 0.00 0.00 3.18
303 310 6.710295 TGAGTGTTTGCATCTGTACTAATGTT 59.290 34.615 9.01 0.00 0.00 2.71
304 311 6.230472 TGAGTGTTTGCATCTGTACTAATGT 58.770 36.000 9.01 0.00 0.00 2.71
305 312 6.726258 TGAGTGTTTGCATCTGTACTAATG 57.274 37.500 0.00 0.00 0.00 1.90
306 313 8.040727 TGTATGAGTGTTTGCATCTGTACTAAT 58.959 33.333 0.00 0.00 0.00 1.73
307 314 7.382898 TGTATGAGTGTTTGCATCTGTACTAA 58.617 34.615 0.00 0.00 0.00 2.24
308 315 6.930731 TGTATGAGTGTTTGCATCTGTACTA 58.069 36.000 0.00 0.00 0.00 1.82
309 316 5.793817 TGTATGAGTGTTTGCATCTGTACT 58.206 37.500 0.00 0.00 0.00 2.73
310 317 6.668541 ATGTATGAGTGTTTGCATCTGTAC 57.331 37.500 0.00 0.00 0.00 2.90
311 318 6.475402 CGTATGTATGAGTGTTTGCATCTGTA 59.525 38.462 0.00 0.00 0.00 2.74
312 319 5.291858 CGTATGTATGAGTGTTTGCATCTGT 59.708 40.000 0.00 0.00 0.00 3.41
313 320 5.731278 CGTATGTATGAGTGTTTGCATCTG 58.269 41.667 0.00 0.00 0.00 2.90
314 321 4.271049 GCGTATGTATGAGTGTTTGCATCT 59.729 41.667 0.00 0.00 0.00 2.90
315 322 4.518217 GCGTATGTATGAGTGTTTGCATC 58.482 43.478 0.00 0.00 0.00 3.91
316 323 3.001228 CGCGTATGTATGAGTGTTTGCAT 59.999 43.478 0.00 0.00 0.00 3.96
317 324 2.347150 CGCGTATGTATGAGTGTTTGCA 59.653 45.455 0.00 0.00 0.00 4.08
318 325 2.845764 GCGCGTATGTATGAGTGTTTGC 60.846 50.000 8.43 0.00 0.00 3.68
319 326 2.347150 TGCGCGTATGTATGAGTGTTTG 59.653 45.455 8.43 0.00 0.00 2.93
320 327 2.612604 TGCGCGTATGTATGAGTGTTT 58.387 42.857 8.43 0.00 0.00 2.83
321 328 2.287393 TGCGCGTATGTATGAGTGTT 57.713 45.000 8.43 0.00 0.00 3.32
322 329 2.509052 ATGCGCGTATGTATGAGTGT 57.491 45.000 9.48 0.00 0.00 3.55
323 330 3.119628 GTGTATGCGCGTATGTATGAGTG 59.880 47.826 20.45 0.00 0.00 3.51
324 331 3.004419 AGTGTATGCGCGTATGTATGAGT 59.996 43.478 20.45 0.00 0.00 3.41
325 332 3.565516 AGTGTATGCGCGTATGTATGAG 58.434 45.455 20.45 0.00 0.00 2.90
326 333 3.003897 TGAGTGTATGCGCGTATGTATGA 59.996 43.478 20.45 0.00 0.00 2.15
327 334 3.119628 GTGAGTGTATGCGCGTATGTATG 59.880 47.826 20.45 0.00 0.00 2.39
328 335 3.305964 GTGAGTGTATGCGCGTATGTAT 58.694 45.455 20.45 2.87 0.00 2.29
329 336 2.542205 GGTGAGTGTATGCGCGTATGTA 60.542 50.000 20.45 5.53 0.00 2.29
330 337 1.556564 GTGAGTGTATGCGCGTATGT 58.443 50.000 20.45 0.00 0.00 2.29
331 338 0.852777 GGTGAGTGTATGCGCGTATG 59.147 55.000 20.45 0.00 0.00 2.39
332 339 0.249322 GGGTGAGTGTATGCGCGTAT 60.249 55.000 15.52 15.52 0.00 3.06
333 340 1.140161 GGGTGAGTGTATGCGCGTA 59.860 57.895 8.43 4.92 0.00 4.42
334 341 2.125673 GGGTGAGTGTATGCGCGT 60.126 61.111 8.43 7.55 0.00 6.01
335 342 2.011741 TAGGGGTGAGTGTATGCGCG 62.012 60.000 0.00 0.00 0.00 6.86
336 343 0.393077 ATAGGGGTGAGTGTATGCGC 59.607 55.000 0.00 0.00 0.00 6.09
337 344 1.686587 TCATAGGGGTGAGTGTATGCG 59.313 52.381 0.00 0.00 0.00 4.73
338 345 3.467803 GTTCATAGGGGTGAGTGTATGC 58.532 50.000 0.00 0.00 0.00 3.14
339 346 3.717707 CGTTCATAGGGGTGAGTGTATG 58.282 50.000 0.00 0.00 0.00 2.39
340 347 2.102588 GCGTTCATAGGGGTGAGTGTAT 59.897 50.000 0.00 0.00 0.00 2.29
341 348 1.479323 GCGTTCATAGGGGTGAGTGTA 59.521 52.381 0.00 0.00 0.00 2.90
342 349 0.249398 GCGTTCATAGGGGTGAGTGT 59.751 55.000 0.00 0.00 0.00 3.55
343 350 0.249120 TGCGTTCATAGGGGTGAGTG 59.751 55.000 0.00 0.00 0.00 3.51
344 351 0.249398 GTGCGTTCATAGGGGTGAGT 59.751 55.000 0.00 0.00 0.00 3.41
345 352 0.249120 TGTGCGTTCATAGGGGTGAG 59.751 55.000 0.00 0.00 0.00 3.51
346 353 0.036765 GTGTGCGTTCATAGGGGTGA 60.037 55.000 0.00 0.00 0.00 4.02
347 354 0.321210 TGTGTGCGTTCATAGGGGTG 60.321 55.000 0.00 0.00 0.00 4.61
348 355 0.321298 GTGTGTGCGTTCATAGGGGT 60.321 55.000 0.00 0.00 0.00 4.95
349 356 1.358725 CGTGTGTGCGTTCATAGGGG 61.359 60.000 0.00 0.00 0.00 4.79
350 357 1.966493 GCGTGTGTGCGTTCATAGGG 61.966 60.000 0.00 0.00 0.00 3.53
351 358 1.288419 TGCGTGTGTGCGTTCATAGG 61.288 55.000 0.00 0.00 37.81 2.57
352 359 0.179250 GTGCGTGTGTGCGTTCATAG 60.179 55.000 0.00 0.00 37.81 2.23
353 360 0.876342 TGTGCGTGTGTGCGTTCATA 60.876 50.000 0.00 0.00 37.81 2.15
354 361 2.176926 TGTGCGTGTGTGCGTTCAT 61.177 52.632 0.00 0.00 37.81 2.57
355 362 2.815647 TGTGCGTGTGTGCGTTCA 60.816 55.556 0.00 0.00 37.81 3.18
356 363 2.350760 GTGTGCGTGTGTGCGTTC 60.351 61.111 0.00 0.00 37.81 3.95
357 364 3.871574 GGTGTGCGTGTGTGCGTT 61.872 61.111 0.00 0.00 37.81 4.84
360 367 1.635663 GATAGGGTGTGCGTGTGTGC 61.636 60.000 0.00 0.00 0.00 4.57
361 368 1.019278 GGATAGGGTGTGCGTGTGTG 61.019 60.000 0.00 0.00 0.00 3.82
362 369 1.295423 GGATAGGGTGTGCGTGTGT 59.705 57.895 0.00 0.00 0.00 3.72
363 370 1.449601 GGGATAGGGTGTGCGTGTG 60.450 63.158 0.00 0.00 0.00 3.82
364 371 0.324923 TAGGGATAGGGTGTGCGTGT 60.325 55.000 0.00 0.00 0.00 4.49
365 372 1.048601 ATAGGGATAGGGTGTGCGTG 58.951 55.000 0.00 0.00 0.00 5.34
366 373 1.048601 CATAGGGATAGGGTGTGCGT 58.951 55.000 0.00 0.00 0.00 5.24
367 374 1.273606 CTCATAGGGATAGGGTGTGCG 59.726 57.143 0.00 0.00 0.00 5.34
368 375 1.002544 GCTCATAGGGATAGGGTGTGC 59.997 57.143 0.00 0.00 0.00 4.57
369 376 2.037772 GTGCTCATAGGGATAGGGTGTG 59.962 54.545 0.00 0.00 0.00 3.82
370 377 2.330216 GTGCTCATAGGGATAGGGTGT 58.670 52.381 0.00 0.00 0.00 4.16
371 378 1.625818 GGTGCTCATAGGGATAGGGTG 59.374 57.143 0.00 0.00 0.00 4.61
372 379 1.509961 AGGTGCTCATAGGGATAGGGT 59.490 52.381 0.00 0.00 0.00 4.34
373 380 2.334006 AGGTGCTCATAGGGATAGGG 57.666 55.000 0.00 0.00 0.00 3.53
374 381 3.242867 TGAAGGTGCTCATAGGGATAGG 58.757 50.000 0.00 0.00 0.00 2.57
375 382 4.590647 TCTTGAAGGTGCTCATAGGGATAG 59.409 45.833 0.00 0.00 0.00 2.08
376 383 4.556697 TCTTGAAGGTGCTCATAGGGATA 58.443 43.478 0.00 0.00 0.00 2.59
377 384 3.387962 TCTTGAAGGTGCTCATAGGGAT 58.612 45.455 0.00 0.00 0.00 3.85
378 385 2.768527 CTCTTGAAGGTGCTCATAGGGA 59.231 50.000 0.00 0.00 0.00 4.20
379 386 2.768527 TCTCTTGAAGGTGCTCATAGGG 59.231 50.000 0.00 0.00 0.00 3.53
380 387 3.450457 AGTCTCTTGAAGGTGCTCATAGG 59.550 47.826 0.00 0.00 0.00 2.57
381 388 4.159321 TCAGTCTCTTGAAGGTGCTCATAG 59.841 45.833 0.00 0.00 0.00 2.23
382 389 4.089361 TCAGTCTCTTGAAGGTGCTCATA 58.911 43.478 0.00 0.00 0.00 2.15
383 390 2.902486 TCAGTCTCTTGAAGGTGCTCAT 59.098 45.455 0.00 0.00 0.00 2.90
384 391 2.298446 CTCAGTCTCTTGAAGGTGCTCA 59.702 50.000 0.00 0.00 0.00 4.26
385 392 2.930455 GCTCAGTCTCTTGAAGGTGCTC 60.930 54.545 0.00 0.00 0.00 4.26
386 393 1.001860 GCTCAGTCTCTTGAAGGTGCT 59.998 52.381 0.00 0.00 0.00 4.40
387 394 1.437625 GCTCAGTCTCTTGAAGGTGC 58.562 55.000 0.00 0.00 0.00 5.01
388 395 1.345741 TGGCTCAGTCTCTTGAAGGTG 59.654 52.381 0.00 0.00 0.00 4.00
389 396 1.622811 CTGGCTCAGTCTCTTGAAGGT 59.377 52.381 0.00 0.00 0.00 3.50
390 397 1.675415 GCTGGCTCAGTCTCTTGAAGG 60.675 57.143 0.00 0.00 33.43 3.46
391 398 1.001746 TGCTGGCTCAGTCTCTTGAAG 59.998 52.381 4.45 0.00 33.43 3.02
392 399 1.051008 TGCTGGCTCAGTCTCTTGAA 58.949 50.000 4.45 0.00 33.43 2.69
393 400 1.066358 CATGCTGGCTCAGTCTCTTGA 60.066 52.381 4.45 0.00 33.43 3.02
394 401 1.370609 CATGCTGGCTCAGTCTCTTG 58.629 55.000 4.45 0.00 33.43 3.02
395 402 0.252479 CCATGCTGGCTCAGTCTCTT 59.748 55.000 4.45 0.00 33.43 2.85
396 403 1.906253 CCATGCTGGCTCAGTCTCT 59.094 57.895 4.45 0.00 33.43 3.10
397 404 4.536316 CCATGCTGGCTCAGTCTC 57.464 61.111 4.45 0.00 33.43 3.36
406 413 3.536956 AATTTCAAGATGCCATGCTGG 57.463 42.857 0.00 0.00 41.55 4.85
407 414 4.501559 CGTAAATTTCAAGATGCCATGCTG 59.498 41.667 0.00 0.00 0.00 4.41
408 415 4.398988 TCGTAAATTTCAAGATGCCATGCT 59.601 37.500 0.00 0.00 0.00 3.79
409 416 4.671377 TCGTAAATTTCAAGATGCCATGC 58.329 39.130 0.00 0.00 0.00 4.06
410 417 6.324819 ACTTCGTAAATTTCAAGATGCCATG 58.675 36.000 0.00 0.00 0.00 3.66
411 418 6.515272 ACTTCGTAAATTTCAAGATGCCAT 57.485 33.333 0.00 0.00 0.00 4.40
412 419 5.390461 CGACTTCGTAAATTTCAAGATGCCA 60.390 40.000 0.00 0.00 34.11 4.92
413 420 5.022021 CGACTTCGTAAATTTCAAGATGCC 58.978 41.667 0.00 0.00 34.11 4.40
414 421 4.492294 GCGACTTCGTAAATTTCAAGATGC 59.508 41.667 0.00 2.78 42.22 3.91
415 422 5.022021 GGCGACTTCGTAAATTTCAAGATG 58.978 41.667 0.00 0.00 42.22 2.90
416 423 4.693566 TGGCGACTTCGTAAATTTCAAGAT 59.306 37.500 0.00 0.00 42.22 2.40
417 424 4.059511 TGGCGACTTCGTAAATTTCAAGA 58.940 39.130 0.00 0.00 42.22 3.02
418 425 4.398549 TGGCGACTTCGTAAATTTCAAG 57.601 40.909 0.00 0.00 42.22 3.02
419 426 5.870433 TCTATGGCGACTTCGTAAATTTCAA 59.130 36.000 0.00 0.00 42.22 2.69
420 427 5.290158 GTCTATGGCGACTTCGTAAATTTCA 59.710 40.000 0.00 0.00 42.22 2.69
421 428 5.553952 CGTCTATGGCGACTTCGTAAATTTC 60.554 44.000 0.00 0.00 42.22 2.17
422 429 4.266976 CGTCTATGGCGACTTCGTAAATTT 59.733 41.667 0.00 0.00 42.22 1.82
423 430 3.795101 CGTCTATGGCGACTTCGTAAATT 59.205 43.478 0.00 0.00 42.22 1.82
424 431 3.369385 CGTCTATGGCGACTTCGTAAAT 58.631 45.455 0.00 0.00 42.22 1.40
425 432 2.789208 CGTCTATGGCGACTTCGTAAA 58.211 47.619 0.00 0.00 42.22 2.01
426 433 1.532505 GCGTCTATGGCGACTTCGTAA 60.533 52.381 0.00 0.00 42.22 3.18
427 434 0.028505 GCGTCTATGGCGACTTCGTA 59.971 55.000 0.00 0.00 42.22 3.43
428 435 1.226603 GCGTCTATGGCGACTTCGT 60.227 57.895 0.00 0.00 42.22 3.85
429 436 1.944676 GGCGTCTATGGCGACTTCG 60.945 63.158 0.00 0.00 43.27 3.79
430 437 1.437986 AGGCGTCTATGGCGACTTC 59.562 57.895 0.00 0.00 46.72 3.01
431 438 3.617368 AGGCGTCTATGGCGACTT 58.383 55.556 0.00 0.00 46.72 3.01
433 440 2.353607 CGAGGCGTCTATGGCGAC 60.354 66.667 4.69 0.00 39.82 5.19
434 441 2.827190 ACGAGGCGTCTATGGCGA 60.827 61.111 2.65 0.00 33.69 5.54
457 464 4.595538 TTCAGTGGGCGTTCGCGT 62.596 61.111 5.77 0.00 43.62 6.01
458 465 3.295228 CTTTCAGTGGGCGTTCGCG 62.295 63.158 10.94 0.00 44.73 5.87
459 466 2.251642 ACTTTCAGTGGGCGTTCGC 61.252 57.895 8.75 8.75 0.00 4.70
460 467 1.569493 CACTTTCAGTGGGCGTTCG 59.431 57.895 0.00 0.00 42.35 3.95
461 468 1.282875 GCACTTTCAGTGGGCGTTC 59.717 57.895 6.05 0.00 46.01 3.95
462 469 0.823356 ATGCACTTTCAGTGGGCGTT 60.823 50.000 6.05 0.00 46.01 4.84
463 470 1.228245 ATGCACTTTCAGTGGGCGT 60.228 52.632 6.05 0.00 46.01 5.68
464 471 1.503542 GATGCACTTTCAGTGGGCG 59.496 57.895 6.05 0.00 46.01 6.13
465 472 1.503542 CGATGCACTTTCAGTGGGC 59.496 57.895 6.05 0.00 46.01 5.36
466 473 1.503542 GCGATGCACTTTCAGTGGG 59.496 57.895 6.05 0.00 46.01 4.61
467 474 1.503542 GGCGATGCACTTTCAGTGG 59.496 57.895 6.05 0.00 46.01 4.00
469 476 2.034879 CCGGCGATGCACTTTCAGT 61.035 57.895 9.30 0.00 0.00 3.41
470 477 1.298157 TTCCGGCGATGCACTTTCAG 61.298 55.000 9.30 0.00 0.00 3.02
471 478 0.886938 TTTCCGGCGATGCACTTTCA 60.887 50.000 9.30 0.00 0.00 2.69
472 479 0.451783 ATTTCCGGCGATGCACTTTC 59.548 50.000 9.30 0.00 0.00 2.62
473 480 0.887933 AATTTCCGGCGATGCACTTT 59.112 45.000 9.30 0.00 0.00 2.66
474 481 0.451783 GAATTTCCGGCGATGCACTT 59.548 50.000 9.30 0.00 0.00 3.16
475 482 0.392998 AGAATTTCCGGCGATGCACT 60.393 50.000 9.30 0.00 0.00 4.40
476 483 1.295792 TAGAATTTCCGGCGATGCAC 58.704 50.000 9.30 0.00 0.00 4.57
477 484 2.031258 TTAGAATTTCCGGCGATGCA 57.969 45.000 9.30 0.00 0.00 3.96
478 485 3.414549 TTTTAGAATTTCCGGCGATGC 57.585 42.857 9.30 0.00 0.00 3.91
479 486 8.574196 AATTTATTTTAGAATTTCCGGCGATG 57.426 30.769 9.30 0.00 0.00 3.84
480 487 8.410141 TGAATTTATTTTAGAATTTCCGGCGAT 58.590 29.630 9.30 0.00 0.00 4.58
481 488 7.763356 TGAATTTATTTTAGAATTTCCGGCGA 58.237 30.769 9.30 0.00 0.00 5.54
482 489 7.913297 TCTGAATTTATTTTAGAATTTCCGGCG 59.087 33.333 0.00 0.00 0.00 6.46
483 490 9.581099 TTCTGAATTTATTTTAGAATTTCCGGC 57.419 29.630 0.00 0.00 0.00 6.13
495 502 9.585099 TGCTCGCATTATTTCTGAATTTATTTT 57.415 25.926 0.00 0.00 0.00 1.82
496 503 9.023967 GTGCTCGCATTATTTCTGAATTTATTT 57.976 29.630 0.00 0.00 0.00 1.40
497 504 7.649306 GGTGCTCGCATTATTTCTGAATTTATT 59.351 33.333 0.00 0.00 0.00 1.40
498 505 7.141363 GGTGCTCGCATTATTTCTGAATTTAT 58.859 34.615 0.00 0.00 0.00 1.40
499 506 6.094742 TGGTGCTCGCATTATTTCTGAATTTA 59.905 34.615 0.00 0.00 0.00 1.40
500 507 5.105797 TGGTGCTCGCATTATTTCTGAATTT 60.106 36.000 0.00 0.00 0.00 1.82
501 508 4.398988 TGGTGCTCGCATTATTTCTGAATT 59.601 37.500 0.00 0.00 0.00 2.17
502 509 3.947196 TGGTGCTCGCATTATTTCTGAAT 59.053 39.130 0.00 0.00 0.00 2.57
503 510 3.342719 TGGTGCTCGCATTATTTCTGAA 58.657 40.909 0.00 0.00 0.00 3.02
504 511 2.984562 TGGTGCTCGCATTATTTCTGA 58.015 42.857 0.00 0.00 0.00 3.27
505 512 3.374988 TCTTGGTGCTCGCATTATTTCTG 59.625 43.478 0.00 0.00 0.00 3.02
506 513 3.375299 GTCTTGGTGCTCGCATTATTTCT 59.625 43.478 0.00 0.00 0.00 2.52
507 514 3.126858 TGTCTTGGTGCTCGCATTATTTC 59.873 43.478 0.00 0.00 0.00 2.17
508 515 3.081061 TGTCTTGGTGCTCGCATTATTT 58.919 40.909 0.00 0.00 0.00 1.40
509 516 2.710377 TGTCTTGGTGCTCGCATTATT 58.290 42.857 0.00 0.00 0.00 1.40
510 517 2.401583 TGTCTTGGTGCTCGCATTAT 57.598 45.000 0.00 0.00 0.00 1.28
511 518 2.009051 CATGTCTTGGTGCTCGCATTA 58.991 47.619 0.00 0.00 0.00 1.90
512 519 0.806868 CATGTCTTGGTGCTCGCATT 59.193 50.000 0.00 0.00 0.00 3.56
513 520 0.036105 TCATGTCTTGGTGCTCGCAT 60.036 50.000 0.00 0.00 0.00 4.73
514 521 0.250252 TTCATGTCTTGGTGCTCGCA 60.250 50.000 0.00 0.00 0.00 5.10
515 522 1.063174 GATTCATGTCTTGGTGCTCGC 59.937 52.381 0.00 0.00 0.00 5.03
516 523 2.349590 TGATTCATGTCTTGGTGCTCG 58.650 47.619 0.00 0.00 0.00 5.03
517 524 3.943381 TCATGATTCATGTCTTGGTGCTC 59.057 43.478 22.64 0.00 41.98 4.26
518 525 3.959293 TCATGATTCATGTCTTGGTGCT 58.041 40.909 22.64 0.00 41.98 4.40
519 526 4.499188 CCATCATGATTCATGTCTTGGTGC 60.499 45.833 22.64 0.00 41.98 5.01
520 527 4.037565 CCCATCATGATTCATGTCTTGGTG 59.962 45.833 26.09 19.54 41.98 4.17
521 528 4.212716 CCCATCATGATTCATGTCTTGGT 58.787 43.478 26.09 5.23 41.98 3.67
522 529 3.005472 GCCCATCATGATTCATGTCTTGG 59.995 47.826 22.64 23.41 41.98 3.61
523 530 3.889538 AGCCCATCATGATTCATGTCTTG 59.110 43.478 22.64 17.94 41.98 3.02
524 531 4.180377 AGCCCATCATGATTCATGTCTT 57.820 40.909 22.64 9.32 41.98 3.01
525 532 3.878237 AGCCCATCATGATTCATGTCT 57.122 42.857 22.64 11.29 41.98 3.41
526 533 5.311265 TCTTAGCCCATCATGATTCATGTC 58.689 41.667 22.64 10.45 41.98 3.06
527 534 5.314718 TCTTAGCCCATCATGATTCATGT 57.685 39.130 22.64 10.26 41.98 3.21
528 535 6.835819 ATTCTTAGCCCATCATGATTCATG 57.164 37.500 18.71 18.71 42.60 3.07
529 536 6.436532 GGAATTCTTAGCCCATCATGATTCAT 59.563 38.462 5.16 0.00 0.00 2.57
530 537 5.771666 GGAATTCTTAGCCCATCATGATTCA 59.228 40.000 5.16 0.00 0.00 2.57
531 538 5.771666 TGGAATTCTTAGCCCATCATGATTC 59.228 40.000 5.16 0.00 0.00 2.52
532 539 5.537674 GTGGAATTCTTAGCCCATCATGATT 59.462 40.000 5.16 0.00 0.00 2.57
533 540 5.075493 GTGGAATTCTTAGCCCATCATGAT 58.925 41.667 1.18 1.18 0.00 2.45
534 541 4.166725 AGTGGAATTCTTAGCCCATCATGA 59.833 41.667 5.23 0.00 0.00 3.07
535 542 4.277672 CAGTGGAATTCTTAGCCCATCATG 59.722 45.833 5.23 0.00 0.00 3.07
536 543 4.079558 ACAGTGGAATTCTTAGCCCATCAT 60.080 41.667 5.23 0.00 0.00 2.45
537 544 3.266772 ACAGTGGAATTCTTAGCCCATCA 59.733 43.478 5.23 0.00 0.00 3.07
538 545 3.879892 GACAGTGGAATTCTTAGCCCATC 59.120 47.826 5.23 0.00 0.00 3.51
539 546 3.372025 GGACAGTGGAATTCTTAGCCCAT 60.372 47.826 5.23 0.00 0.00 4.00
540 547 2.026262 GGACAGTGGAATTCTTAGCCCA 60.026 50.000 5.23 0.00 0.00 5.36
541 548 2.644676 GGACAGTGGAATTCTTAGCCC 58.355 52.381 5.23 0.00 0.00 5.19
542 549 2.026262 TGGGACAGTGGAATTCTTAGCC 60.026 50.000 5.23 0.37 0.00 3.93
543 550 3.010420 GTGGGACAGTGGAATTCTTAGC 58.990 50.000 5.23 0.00 41.80 3.09
544 551 4.559862 AGTGGGACAGTGGAATTCTTAG 57.440 45.455 5.23 0.00 42.47 2.18
545 552 4.993705 AAGTGGGACAGTGGAATTCTTA 57.006 40.909 5.23 0.00 43.84 2.10
546 553 3.884037 AAGTGGGACAGTGGAATTCTT 57.116 42.857 5.23 0.00 43.84 2.52
547 554 4.597507 TCTTAAGTGGGACAGTGGAATTCT 59.402 41.667 5.23 0.00 43.84 2.40
548 555 4.906618 TCTTAAGTGGGACAGTGGAATTC 58.093 43.478 1.63 0.00 43.84 2.17
549 556 4.993705 TCTTAAGTGGGACAGTGGAATT 57.006 40.909 1.63 0.00 43.84 2.17
550 557 4.351111 ACTTCTTAAGTGGGACAGTGGAAT 59.649 41.667 1.63 0.00 43.84 3.01
551 558 3.714798 ACTTCTTAAGTGGGACAGTGGAA 59.285 43.478 1.63 0.00 43.84 3.53
552 559 3.314693 ACTTCTTAAGTGGGACAGTGGA 58.685 45.455 1.63 0.00 43.84 4.02
553 560 3.771577 ACTTCTTAAGTGGGACAGTGG 57.228 47.619 1.63 0.00 43.84 4.00
563 570 2.699954 CGTGGATGGCACTTCTTAAGT 58.300 47.619 1.63 0.00 44.06 2.24
564 571 1.398390 GCGTGGATGGCACTTCTTAAG 59.602 52.381 0.00 0.00 0.00 1.85
565 572 1.003118 AGCGTGGATGGCACTTCTTAA 59.997 47.619 0.00 0.00 0.00 1.85
566 573 0.613260 AGCGTGGATGGCACTTCTTA 59.387 50.000 0.00 0.00 0.00 2.10
632 642 3.009033 CCTTGATTCTGACAGGTTGGGTA 59.991 47.826 1.81 0.00 0.00 3.69
655 667 5.129320 AGGAGCCCCAAATTTTGTCATATTC 59.871 40.000 8.26 0.00 33.88 1.75
656 668 5.032170 AGGAGCCCCAAATTTTGTCATATT 58.968 37.500 8.26 0.00 33.88 1.28
665 677 2.639347 CAAGGAAAGGAGCCCCAAATTT 59.361 45.455 0.00 0.00 33.88 1.82
693 705 4.142271 CCCTTTGTACAGCTGTGTCAAAAA 60.142 41.667 31.59 20.60 38.19 1.94
694 706 3.380004 CCCTTTGTACAGCTGTGTCAAAA 59.620 43.478 31.59 23.44 38.19 2.44
695 707 2.948979 CCCTTTGTACAGCTGTGTCAAA 59.051 45.455 30.84 30.84 38.19 2.69
696 708 2.171659 TCCCTTTGTACAGCTGTGTCAA 59.828 45.455 29.57 26.72 38.19 3.18
737 758 1.077501 TCTTGCATGGTAGCTGCCC 60.078 57.895 19.07 7.87 38.89 5.36
759 780 1.134175 GTTGGCCCAATTGTATCCACG 59.866 52.381 0.00 0.00 0.00 4.94
881 940 6.496565 TGCTTTTAAATGGAAAGGAGATGGAA 59.503 34.615 3.54 0.00 35.24 3.53
1069 1153 0.395862 ATGGACGGAGGAGACGACAT 60.396 55.000 0.00 0.00 34.93 3.06
1179 1275 3.319198 GACGCCTCCCCCTTCACA 61.319 66.667 0.00 0.00 0.00 3.58
1183 1279 3.330720 CAAGGACGCCTCCCCCTT 61.331 66.667 0.00 0.00 40.67 3.95
1187 1283 3.644399 GACGACAAGGACGCCTCCC 62.644 68.421 0.00 0.00 37.25 4.30
1213 1312 3.640407 GGTCCTGCAGCAGTCCCA 61.640 66.667 21.26 0.00 0.00 4.37
1241 1343 2.662596 CGCAGTAGGCTGGGTTCA 59.337 61.111 0.00 0.00 46.61 3.18
1248 1350 2.201436 CTGTGTCGTCGCAGTAGGCT 62.201 60.000 13.99 0.00 44.35 4.58
1266 1377 2.312390 GAGAGGAAGGAGTTATCGGCT 58.688 52.381 0.00 0.00 0.00 5.52
1272 1383 0.335361 AGGCGGAGAGGAAGGAGTTA 59.665 55.000 0.00 0.00 0.00 2.24
1274 1385 1.380650 GAGGCGGAGAGGAAGGAGT 60.381 63.158 0.00 0.00 0.00 3.85
1291 1402 3.077556 GGCAGAAGAGGAGCCGGA 61.078 66.667 5.05 0.00 38.86 5.14
1335 1449 2.833582 TCGTCCATCGAGGGCTCC 60.834 66.667 12.24 0.51 44.01 4.70
1345 1471 2.815308 GATGACCGCCTCGTCCAT 59.185 61.111 0.00 0.00 31.35 3.41
1441 1582 3.567797 GAACGCTGCCTGATCCGC 61.568 66.667 0.00 0.00 0.00 5.54
1442 1583 3.257561 CGAACGCTGCCTGATCCG 61.258 66.667 0.00 0.00 0.00 4.18
1443 1584 2.892425 CCGAACGCTGCCTGATCC 60.892 66.667 0.00 0.00 0.00 3.36
1444 1585 3.567797 GCCGAACGCTGCCTGATC 61.568 66.667 0.00 0.00 0.00 2.92
1781 1969 1.342496 CTCGCTGGCTCAATCCATCTA 59.658 52.381 0.00 0.00 35.22 1.98
1795 1983 3.522731 AGCCTACGCCTCTCGCTG 61.523 66.667 0.00 0.00 43.23 5.18
1838 2027 0.731417 AGTACTAGTACAGGCACGCG 59.269 55.000 29.87 3.53 38.48 6.01
1882 2198 9.817365 CATCGAATAATTCAACTATCAACATCC 57.183 33.333 0.00 0.00 0.00 3.51
1935 2672 8.136800 CCATCGAATCATCAAATAATTCAACCA 58.863 33.333 0.00 0.00 31.25 3.67
1936 2673 8.352201 TCCATCGAATCATCAAATAATTCAACC 58.648 33.333 0.00 0.00 31.25 3.77
1937 2674 9.390795 CTCCATCGAATCATCAAATAATTCAAC 57.609 33.333 0.00 0.00 31.25 3.18
1938 2675 9.123902 ACTCCATCGAATCATCAAATAATTCAA 57.876 29.630 0.00 0.00 31.25 2.69
1939 2676 8.562052 CACTCCATCGAATCATCAAATAATTCA 58.438 33.333 0.00 0.00 31.25 2.57
1940 2677 7.536622 GCACTCCATCGAATCATCAAATAATTC 59.463 37.037 0.00 0.00 0.00 2.17
1941 2678 7.230108 AGCACTCCATCGAATCATCAAATAATT 59.770 33.333 0.00 0.00 0.00 1.40
1942 2679 6.713903 AGCACTCCATCGAATCATCAAATAAT 59.286 34.615 0.00 0.00 0.00 1.28
1943 2680 6.057533 AGCACTCCATCGAATCATCAAATAA 58.942 36.000 0.00 0.00 0.00 1.40
1945 2682 4.458397 AGCACTCCATCGAATCATCAAAT 58.542 39.130 0.00 0.00 0.00 2.32
1946 2683 3.877559 AGCACTCCATCGAATCATCAAA 58.122 40.909 0.00 0.00 0.00 2.69
1947 2684 3.548745 AGCACTCCATCGAATCATCAA 57.451 42.857 0.00 0.00 0.00 2.57
1948 2685 3.550842 CGTAGCACTCCATCGAATCATCA 60.551 47.826 0.00 0.00 0.00 3.07
1949 2686 2.983136 CGTAGCACTCCATCGAATCATC 59.017 50.000 0.00 0.00 0.00 2.92
1950 2687 2.362397 ACGTAGCACTCCATCGAATCAT 59.638 45.455 0.00 0.00 0.00 2.45
1951 2688 1.749063 ACGTAGCACTCCATCGAATCA 59.251 47.619 0.00 0.00 0.00 2.57
1952 2689 2.493713 ACGTAGCACTCCATCGAATC 57.506 50.000 0.00 0.00 0.00 2.52
1953 2690 2.286831 CGTACGTAGCACTCCATCGAAT 60.287 50.000 7.22 0.00 0.00 3.34
1954 2691 1.063027 CGTACGTAGCACTCCATCGAA 59.937 52.381 7.22 0.00 0.00 3.71
1955 2692 0.654160 CGTACGTAGCACTCCATCGA 59.346 55.000 7.22 0.00 0.00 3.59
1956 2693 0.376152 ACGTACGTAGCACTCCATCG 59.624 55.000 21.41 0.00 0.00 3.84
1957 2694 3.250464 CTACGTACGTAGCACTCCATC 57.750 52.381 34.92 0.00 41.09 3.51
2015 2752 3.741344 GCCACACCTCATAGTTATTAGCG 59.259 47.826 0.00 0.00 0.00 4.26
2020 2757 4.557705 ACCTAGCCACACCTCATAGTTAT 58.442 43.478 0.00 0.00 0.00 1.89
2021 2758 3.958798 GACCTAGCCACACCTCATAGTTA 59.041 47.826 0.00 0.00 0.00 2.24
2022 2759 2.766828 GACCTAGCCACACCTCATAGTT 59.233 50.000 0.00 0.00 0.00 2.24
2023 2760 2.023888 AGACCTAGCCACACCTCATAGT 60.024 50.000 0.00 0.00 0.00 2.12
2024 2761 2.625790 GAGACCTAGCCACACCTCATAG 59.374 54.545 0.00 0.00 0.00 2.23
2025 2762 2.667470 GAGACCTAGCCACACCTCATA 58.333 52.381 0.00 0.00 0.00 2.15
2026 2763 1.490574 GAGACCTAGCCACACCTCAT 58.509 55.000 0.00 0.00 0.00 2.90
2027 2764 0.965866 CGAGACCTAGCCACACCTCA 60.966 60.000 0.00 0.00 0.00 3.86
2028 2765 1.668101 CCGAGACCTAGCCACACCTC 61.668 65.000 0.00 0.00 0.00 3.85
2029 2766 1.682684 CCGAGACCTAGCCACACCT 60.683 63.158 0.00 0.00 0.00 4.00
2030 2767 1.946475 GACCGAGACCTAGCCACACC 61.946 65.000 0.00 0.00 0.00 4.16
2031 2768 1.511768 GACCGAGACCTAGCCACAC 59.488 63.158 0.00 0.00 0.00 3.82
2032 2769 2.044555 CGACCGAGACCTAGCCACA 61.045 63.158 0.00 0.00 0.00 4.17
2033 2770 1.748122 TCGACCGAGACCTAGCCAC 60.748 63.158 0.00 0.00 0.00 5.01
2034 2771 1.748122 GTCGACCGAGACCTAGCCA 60.748 63.158 3.51 0.00 35.22 4.75
2035 2772 1.451747 AGTCGACCGAGACCTAGCC 60.452 63.158 13.01 0.00 41.83 3.93
2036 2773 0.743701 TCAGTCGACCGAGACCTAGC 60.744 60.000 13.01 0.00 41.83 3.42
2037 2774 1.292061 CTCAGTCGACCGAGACCTAG 58.708 60.000 21.82 0.00 41.83 3.02
2038 2775 0.743701 GCTCAGTCGACCGAGACCTA 60.744 60.000 28.71 0.00 41.83 3.08
2039 2776 2.041686 GCTCAGTCGACCGAGACCT 61.042 63.158 28.71 0.00 41.83 3.85
2040 2777 1.587933 AAGCTCAGTCGACCGAGACC 61.588 60.000 28.71 14.13 41.83 3.85
2041 2778 0.241481 AAAGCTCAGTCGACCGAGAC 59.759 55.000 28.71 19.82 41.23 3.36
2042 2779 1.817357 TAAAGCTCAGTCGACCGAGA 58.183 50.000 28.71 16.06 0.00 4.04
2043 2780 2.631418 TTAAAGCTCAGTCGACCGAG 57.369 50.000 21.97 21.97 0.00 4.63
2044 2781 2.490509 TGATTAAAGCTCAGTCGACCGA 59.509 45.455 13.01 6.63 0.00 4.69
2045 2782 2.876091 TGATTAAAGCTCAGTCGACCG 58.124 47.619 13.01 1.05 0.00 4.79
2046 2783 4.246458 ACTTGATTAAAGCTCAGTCGACC 58.754 43.478 13.01 0.00 39.76 4.79
2047 2784 5.847670 AACTTGATTAAAGCTCAGTCGAC 57.152 39.130 7.70 7.70 39.76 4.20
2048 2785 5.989168 TGAAACTTGATTAAAGCTCAGTCGA 59.011 36.000 0.00 0.00 39.76 4.20
2049 2786 6.228273 TGAAACTTGATTAAAGCTCAGTCG 57.772 37.500 0.00 0.00 39.76 4.18
2052 2789 7.194607 TGACTGAAACTTGATTAAAGCTCAG 57.805 36.000 10.14 10.14 45.84 3.35
2053 2790 7.566760 TTGACTGAAACTTGATTAAAGCTCA 57.433 32.000 0.00 0.00 39.76 4.26
2054 2791 8.909671 CATTTGACTGAAACTTGATTAAAGCTC 58.090 33.333 0.00 0.00 39.76 4.09
2055 2792 8.632679 TCATTTGACTGAAACTTGATTAAAGCT 58.367 29.630 0.00 0.00 39.76 3.74
2056 2793 8.801715 TCATTTGACTGAAACTTGATTAAAGC 57.198 30.769 0.00 0.00 39.76 3.51
2061 2798 9.683069 GTTGTATCATTTGACTGAAACTTGATT 57.317 29.630 0.00 0.00 29.76 2.57
2062 2799 8.849168 TGTTGTATCATTTGACTGAAACTTGAT 58.151 29.630 0.00 0.00 31.25 2.57
2063 2800 8.219546 TGTTGTATCATTTGACTGAAACTTGA 57.780 30.769 0.00 0.00 0.00 3.02
2064 2801 8.908678 CATGTTGTATCATTTGACTGAAACTTG 58.091 33.333 0.00 0.00 0.00 3.16
2065 2802 8.632679 ACATGTTGTATCATTTGACTGAAACTT 58.367 29.630 0.00 0.00 0.00 2.66
2066 2803 8.169977 ACATGTTGTATCATTTGACTGAAACT 57.830 30.769 0.00 0.00 0.00 2.66
2067 2804 9.891828 TTACATGTTGTATCATTTGACTGAAAC 57.108 29.630 2.30 0.00 32.20 2.78
2069 2806 9.500785 TCTTACATGTTGTATCATTTGACTGAA 57.499 29.630 2.30 0.00 32.20 3.02
2070 2807 9.154847 CTCTTACATGTTGTATCATTTGACTGA 57.845 33.333 2.30 0.00 32.20 3.41
2071 2808 9.154847 TCTCTTACATGTTGTATCATTTGACTG 57.845 33.333 2.30 0.00 32.20 3.51
2072 2809 9.376075 CTCTCTTACATGTTGTATCATTTGACT 57.624 33.333 2.30 0.00 32.20 3.41
2073 2810 9.155975 ACTCTCTTACATGTTGTATCATTTGAC 57.844 33.333 2.30 0.00 32.20 3.18
2124 2861 9.734984 TCTCAGTCGATACTATATCCATGTAAA 57.265 33.333 0.00 0.00 33.48 2.01
2125 2862 9.163899 GTCTCAGTCGATACTATATCCATGTAA 57.836 37.037 0.00 0.00 33.48 2.41
2126 2863 8.541234 AGTCTCAGTCGATACTATATCCATGTA 58.459 37.037 0.00 0.00 33.48 2.29
2127 2864 7.398829 AGTCTCAGTCGATACTATATCCATGT 58.601 38.462 0.00 0.00 33.48 3.21
2128 2865 7.857734 AGTCTCAGTCGATACTATATCCATG 57.142 40.000 0.00 0.00 33.48 3.66
2129 2866 9.961264 TTAAGTCTCAGTCGATACTATATCCAT 57.039 33.333 0.00 0.00 33.48 3.41
2130 2867 9.217278 GTTAAGTCTCAGTCGATACTATATCCA 57.783 37.037 0.00 0.00 33.48 3.41
2131 2868 8.382130 CGTTAAGTCTCAGTCGATACTATATCC 58.618 40.741 0.00 0.00 33.48 2.59
2132 2869 9.138062 TCGTTAAGTCTCAGTCGATACTATATC 57.862 37.037 0.00 0.00 33.48 1.63
2133 2870 9.486497 TTCGTTAAGTCTCAGTCGATACTATAT 57.514 33.333 0.00 0.00 33.48 0.86
2134 2871 8.877808 TTCGTTAAGTCTCAGTCGATACTATA 57.122 34.615 0.00 0.00 33.48 1.31
2135 2872 7.495279 ACTTCGTTAAGTCTCAGTCGATACTAT 59.505 37.037 0.00 0.00 42.42 2.12
2136 2873 6.815641 ACTTCGTTAAGTCTCAGTCGATACTA 59.184 38.462 0.00 0.00 42.42 1.82
2137 2874 5.642919 ACTTCGTTAAGTCTCAGTCGATACT 59.357 40.000 0.00 0.00 42.42 2.12
2138 2875 5.867166 ACTTCGTTAAGTCTCAGTCGATAC 58.133 41.667 0.00 0.00 42.42 2.24
2151 2888 7.324135 GTCTCACTTGACTAAGACTTCGTTAAG 59.676 40.741 17.62 17.62 37.36 1.85
2152 2889 7.013083 AGTCTCACTTGACTAAGACTTCGTTAA 59.987 37.037 0.00 0.00 44.57 2.01
2153 2890 6.485984 AGTCTCACTTGACTAAGACTTCGTTA 59.514 38.462 0.00 0.00 44.57 3.18
2154 2891 5.299782 AGTCTCACTTGACTAAGACTTCGTT 59.700 40.000 0.00 0.00 44.57 3.85
2155 2892 4.822896 AGTCTCACTTGACTAAGACTTCGT 59.177 41.667 0.00 0.00 44.57 3.85
2156 2893 5.365403 AGTCTCACTTGACTAAGACTTCG 57.635 43.478 0.00 0.00 44.57 3.79
2160 2897 6.015027 TGCTAAGTCTCACTTGACTAAGAC 57.985 41.667 0.00 0.00 45.49 3.01
2161 2898 6.490381 TCTTGCTAAGTCTCACTTGACTAAGA 59.510 38.462 0.00 0.00 45.49 2.10
2162 2899 6.584563 GTCTTGCTAAGTCTCACTTGACTAAG 59.415 42.308 0.00 0.00 45.49 2.18
2163 2900 6.265649 AGTCTTGCTAAGTCTCACTTGACTAA 59.734 38.462 0.00 0.00 45.49 2.24
2164 2901 5.770663 AGTCTTGCTAAGTCTCACTTGACTA 59.229 40.000 0.00 0.00 45.49 2.59
2166 2903 4.683781 CAGTCTTGCTAAGTCTCACTTGAC 59.316 45.833 0.00 0.00 39.11 3.18
2167 2904 4.584743 TCAGTCTTGCTAAGTCTCACTTGA 59.415 41.667 0.00 0.00 39.11 3.02
2168 2905 4.876125 TCAGTCTTGCTAAGTCTCACTTG 58.124 43.478 0.00 0.00 39.11 3.16
2169 2906 5.736951 ATCAGTCTTGCTAAGTCTCACTT 57.263 39.130 0.00 0.00 41.97 3.16
2170 2907 6.435904 AGTTATCAGTCTTGCTAAGTCTCACT 59.564 38.462 0.00 0.00 0.00 3.41
2171 2908 6.626302 AGTTATCAGTCTTGCTAAGTCTCAC 58.374 40.000 0.00 0.00 0.00 3.51
2172 2909 6.842437 AGTTATCAGTCTTGCTAAGTCTCA 57.158 37.500 0.00 0.00 0.00 3.27
2173 2910 9.887406 GTATAGTTATCAGTCTTGCTAAGTCTC 57.113 37.037 0.00 0.00 0.00 3.36
2174 2911 9.635404 AGTATAGTTATCAGTCTTGCTAAGTCT 57.365 33.333 0.00 0.00 0.00 3.24
2175 2912 9.887406 GAGTATAGTTATCAGTCTTGCTAAGTC 57.113 37.037 0.00 0.00 0.00 3.01
2176 2913 9.409918 TGAGTATAGTTATCAGTCTTGCTAAGT 57.590 33.333 0.00 0.00 0.00 2.24
2179 2916 9.800572 AGATGAGTATAGTTATCAGTCTTGCTA 57.199 33.333 13.24 0.00 0.00 3.49
2180 2917 8.575589 CAGATGAGTATAGTTATCAGTCTTGCT 58.424 37.037 13.24 0.00 0.00 3.91
2181 2918 7.812191 CCAGATGAGTATAGTTATCAGTCTTGC 59.188 40.741 13.24 0.00 0.00 4.01
2182 2919 7.812191 GCCAGATGAGTATAGTTATCAGTCTTG 59.188 40.741 13.24 4.16 0.00 3.02
2183 2920 7.039363 GGCCAGATGAGTATAGTTATCAGTCTT 60.039 40.741 13.24 0.00 0.00 3.01
2184 2921 6.435904 GGCCAGATGAGTATAGTTATCAGTCT 59.564 42.308 13.24 0.00 0.00 3.24
2185 2922 6.209589 TGGCCAGATGAGTATAGTTATCAGTC 59.790 42.308 0.00 7.32 0.00 3.51
2186 2923 6.077993 TGGCCAGATGAGTATAGTTATCAGT 58.922 40.000 0.00 0.00 0.00 3.41
2187 2924 6.596309 TGGCCAGATGAGTATAGTTATCAG 57.404 41.667 0.00 6.47 0.00 2.90
2188 2925 6.994421 TTGGCCAGATGAGTATAGTTATCA 57.006 37.500 5.11 0.00 0.00 2.15
2189 2926 7.880195 ACATTTGGCCAGATGAGTATAGTTATC 59.120 37.037 35.86 4.52 0.00 1.75
2201 2938 5.105635 ACAATGTCTAACATTTGGCCAGATG 60.106 40.000 29.64 29.64 45.80 2.90
2217 2954 3.696051 ACAGCACTGTGAAAACAATGTCT 59.304 39.130 12.86 0.00 43.11 3.41
2233 2970 5.060662 TGTATAGAAGTCACTCACAGCAC 57.939 43.478 0.00 0.00 0.00 4.40
2236 2973 6.214191 ACCATGTATAGAAGTCACTCACAG 57.786 41.667 0.00 0.00 0.00 3.66
2297 3044 4.811557 AGTGACTGCTGAACTTACTGAAAC 59.188 41.667 0.00 0.00 0.00 2.78
2336 3083 7.698628 TCGACATTGTTGAAATGTTTTGACTA 58.301 30.769 4.17 0.00 40.62 2.59
2422 3169 1.804151 GGCCAAAAGGCCGAAATTTTC 59.196 47.619 10.15 0.00 45.53 2.29
2438 3185 1.112315 AAAATTGAGCACCACGGCCA 61.112 50.000 2.24 0.00 0.00 5.36
2461 3208 2.290641 GGCTTTCGCTTTCAGTTTCAGA 59.709 45.455 0.00 0.00 36.09 3.27
2468 3215 0.595095 AGCAAGGCTTTCGCTTTCAG 59.405 50.000 6.27 0.00 33.89 3.02
2479 3226 0.842467 AGGGGTACAGAAGCAAGGCT 60.842 55.000 0.00 0.00 42.56 4.58
2480 3227 0.909623 TAGGGGTACAGAAGCAAGGC 59.090 55.000 0.00 0.00 0.00 4.35
2537 3289 0.748367 CAGGGTCCGATCTCGAGACA 60.748 60.000 19.30 0.00 43.02 3.41
2546 3298 2.066999 GGAAGAGGCAGGGTCCGAT 61.067 63.158 0.00 0.00 0.00 4.18
2549 3301 2.371259 GGAGGAAGAGGCAGGGTCC 61.371 68.421 0.00 0.00 0.00 4.46
2586 3338 9.699410 AGGGAAACAAGTATGATCATATTTTGA 57.301 29.630 30.06 8.99 39.12 2.69
2587 3339 9.740239 CAGGGAAACAAGTATGATCATATTTTG 57.260 33.333 25.77 25.77 32.15 2.44
2588 3340 9.699410 TCAGGGAAACAAGTATGATCATATTTT 57.301 29.630 18.18 14.08 0.00 1.82
2589 3341 9.872684 ATCAGGGAAACAAGTATGATCATATTT 57.127 29.630 18.18 16.79 0.00 1.40
2594 3346 9.159254 ACTATATCAGGGAAACAAGTATGATCA 57.841 33.333 0.00 0.00 0.00 2.92
2595 3347 9.429359 CACTATATCAGGGAAACAAGTATGATC 57.571 37.037 0.00 0.00 0.00 2.92
2599 3351 6.101150 TGCCACTATATCAGGGAAACAAGTAT 59.899 38.462 0.00 0.00 0.00 2.12
2601 3353 4.227300 TGCCACTATATCAGGGAAACAAGT 59.773 41.667 0.00 0.00 0.00 3.16
2602 3354 4.780815 TGCCACTATATCAGGGAAACAAG 58.219 43.478 0.00 0.00 0.00 3.16
2603 3355 4.853468 TGCCACTATATCAGGGAAACAA 57.147 40.909 0.00 0.00 0.00 2.83
2604 3356 4.780815 CTTGCCACTATATCAGGGAAACA 58.219 43.478 0.00 0.00 32.21 2.83
2607 3359 2.106511 GGCTTGCCACTATATCAGGGAA 59.893 50.000 6.79 0.00 0.00 3.97
2632 3393 7.862512 TGAAGTAGTAGTAGTAGAAGAAGGC 57.137 40.000 0.00 0.00 0.00 4.35
2642 3403 7.028361 GCAGTCGATTTTGAAGTAGTAGTAGT 58.972 38.462 0.00 0.00 0.00 2.73
2654 3418 0.666274 ACTCGCGCAGTCGATTTTGA 60.666 50.000 8.75 0.00 35.81 2.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.