Multiple sequence alignment - TraesCS2A01G580200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G580200 chr2A 100.000 2405 0 0 584 2988 772656312 772658716 0.000000e+00 4442.0
1 TraesCS2A01G580200 chr2A 86.717 1709 115 53 726 2375 772662942 772664597 0.000000e+00 1796.0
2 TraesCS2A01G580200 chr2A 100.000 328 0 0 1 328 772655729 772656056 9.160000e-170 606.0
3 TraesCS2A01G580200 chr2A 95.000 240 11 1 2747 2985 97847138 97847377 2.810000e-100 375.0
4 TraesCS2A01G580200 chr2A 94.595 148 7 1 2378 2524 772664650 772664797 8.330000e-56 228.0
5 TraesCS2A01G580200 chr2A 91.753 97 8 0 231 327 772662859 772662955 5.200000e-28 135.0
6 TraesCS2A01G580200 chr2D 84.200 1924 156 91 726 2583 647815229 647813388 0.000000e+00 1733.0
7 TraesCS2A01G580200 chr2D 87.425 334 42 0 1279 1612 33850170 33849837 4.670000e-103 385.0
8 TraesCS2A01G580200 chr2D 80.923 325 55 4 1658 1976 33855502 33855179 1.780000e-62 250.0
9 TraesCS2A01G580200 chr2D 91.489 94 8 0 234 327 647815309 647815216 2.420000e-26 130.0
10 TraesCS2A01G580200 chr2D 86.667 120 8 3 14 131 647816721 647816608 3.130000e-25 126.0
11 TraesCS2A01G580200 chr2D 83.200 125 14 6 113 234 647816571 647816451 1.130000e-19 108.0
12 TraesCS2A01G580200 chr2B 86.066 1299 92 39 766 2013 788004097 788005357 0.000000e+00 1314.0
13 TraesCS2A01G580200 chr2B 96.721 244 7 1 2746 2988 714072474 714072717 3.590000e-109 405.0
14 TraesCS2A01G580200 chr2B 95.000 240 12 0 2749 2988 211627318 211627557 7.820000e-101 377.0
15 TraesCS2A01G580200 chr2B 89.552 268 14 9 2377 2634 788006264 788006527 7.990000e-86 327.0
16 TraesCS2A01G580200 chr2B 93.651 126 8 0 14 139 787992759 787992884 3.930000e-44 189.0
17 TraesCS2A01G580200 chr2B 95.000 40 2 0 726 765 787993208 787993247 2.490000e-06 63.9
18 TraesCS2A01G580200 chr5A 96.680 241 7 1 2749 2988 470042710 470042950 1.670000e-107 399.0
19 TraesCS2A01G580200 chr1B 95.902 244 9 1 2746 2988 354582731 354582974 7.760000e-106 394.0
20 TraesCS2A01G580200 chrUn 87.427 342 41 1 1273 1612 12882693 12882352 2.790000e-105 392.0
21 TraesCS2A01G580200 chr3A 95.417 240 11 0 2749 2988 57259187 57259426 1.680000e-102 383.0
22 TraesCS2A01G580200 chr7A 95.397 239 10 1 2751 2988 18892339 18892577 2.170000e-101 379.0
23 TraesCS2A01G580200 chr6B 94.606 241 12 1 2749 2988 121530252 121530012 3.640000e-99 372.0
24 TraesCS2A01G580200 chr4A 93.878 245 14 1 2745 2988 11601906 11601662 4.710000e-98 368.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G580200 chr2A 772655729 772658716 2987 False 2524.000000 4442 100.000000 1 2988 2 chr2A.!!$F2 2987
1 TraesCS2A01G580200 chr2A 772662859 772664797 1938 False 719.666667 1796 91.021667 231 2524 3 chr2A.!!$F3 2293
2 TraesCS2A01G580200 chr2D 647813388 647816721 3333 True 524.250000 1733 86.389000 14 2583 4 chr2D.!!$R3 2569
3 TraesCS2A01G580200 chr2B 788004097 788006527 2430 False 820.500000 1314 87.809000 766 2634 2 chr2B.!!$F4 1868

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
677 1876 0.030603 AGGGGGAAGAGGAAGGCTAG 60.031 60.0 0.0 0.0 0.0 3.42 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2235 3770 0.649475 CGGAAGATTGAAGAGCGCAG 59.351 55.0 11.47 0.0 0.0 5.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 8.635877 TTTATGTTGAAACAACACAACCATAC 57.364 30.769 17.41 0.00 43.59 2.39
46 47 6.668645 ACCATACTTAAATGTCAGCCCAATA 58.331 36.000 0.00 0.00 0.00 1.90
47 48 6.772716 ACCATACTTAAATGTCAGCCCAATAG 59.227 38.462 0.00 0.00 0.00 1.73
51 52 6.116126 ACTTAAATGTCAGCCCAATAGAGAC 58.884 40.000 0.00 0.00 0.00 3.36
67 68 4.727507 AGAGACGAAATGCATAGTGAGT 57.272 40.909 0.00 0.00 0.00 3.41
79 80 9.650539 AAATGCATAGTGAGTCAGCTATAATAG 57.349 33.333 0.00 5.07 0.00 1.73
81 82 7.821652 TGCATAGTGAGTCAGCTATAATAGAC 58.178 38.462 12.16 0.00 0.00 2.59
82 83 7.094162 TGCATAGTGAGTCAGCTATAATAGACC 60.094 40.741 12.16 0.00 0.00 3.85
83 84 7.094162 GCATAGTGAGTCAGCTATAATAGACCA 60.094 40.741 12.16 0.00 0.00 4.02
86 87 6.780031 AGTGAGTCAGCTATAATAGACCACAT 59.220 38.462 16.27 6.10 36.02 3.21
88 89 8.240682 GTGAGTCAGCTATAATAGACCACATAG 58.759 40.741 0.00 0.00 34.87 2.23
89 90 7.394641 TGAGTCAGCTATAATAGACCACATAGG 59.605 40.741 0.00 0.00 45.67 2.57
90 91 7.471041 AGTCAGCTATAATAGACCACATAGGA 58.529 38.462 0.00 0.00 41.22 2.94
91 92 7.613801 AGTCAGCTATAATAGACCACATAGGAG 59.386 40.741 0.00 0.00 41.22 3.69
127 128 0.541863 AAGCCCTAATCCGACTGGTG 59.458 55.000 0.00 0.00 36.30 4.17
157 214 5.009010 CACACCTGCAAAGTCACTTCTAATT 59.991 40.000 0.00 0.00 0.00 1.40
161 218 7.752239 CACCTGCAAAGTCACTTCTAATTTATG 59.248 37.037 0.00 0.00 0.00 1.90
190 247 3.009033 CACCCTGTAATCTTTGTCCTGGA 59.991 47.826 0.00 0.00 0.00 3.86
193 250 4.164988 CCCTGTAATCTTTGTCCTGGATCT 59.835 45.833 0.00 0.00 0.00 2.75
195 252 5.359194 TGTAATCTTTGTCCTGGATCTCC 57.641 43.478 0.00 0.00 0.00 3.71
196 253 5.032846 TGTAATCTTTGTCCTGGATCTCCT 58.967 41.667 0.00 0.00 36.82 3.69
197 254 6.202331 TGTAATCTTTGTCCTGGATCTCCTA 58.798 40.000 0.00 0.00 36.82 2.94
200 257 7.937700 AATCTTTGTCCTGGATCTCCTATAA 57.062 36.000 0.00 0.00 36.82 0.98
276 1475 7.105588 TGAACAATGCTAGCCATACATATAGG 58.894 38.462 13.29 0.00 32.67 2.57
279 1478 7.556844 ACAATGCTAGCCATACATATAGGTAC 58.443 38.462 13.29 0.00 32.67 3.34
320 1519 8.783833 ATTTCCATCCGATATTACTCATCAAG 57.216 34.615 0.00 0.00 0.00 3.02
321 1520 5.724328 TCCATCCGATATTACTCATCAAGC 58.276 41.667 0.00 0.00 0.00 4.01
322 1521 5.245977 TCCATCCGATATTACTCATCAAGCA 59.754 40.000 0.00 0.00 0.00 3.91
323 1522 5.934043 CCATCCGATATTACTCATCAAGCAA 59.066 40.000 0.00 0.00 0.00 3.91
324 1523 6.596888 CCATCCGATATTACTCATCAAGCAAT 59.403 38.462 0.00 0.00 0.00 3.56
325 1524 7.120285 CCATCCGATATTACTCATCAAGCAATT 59.880 37.037 0.00 0.00 0.00 2.32
326 1525 8.509690 CATCCGATATTACTCATCAAGCAATTT 58.490 33.333 0.00 0.00 0.00 1.82
327 1526 8.450578 TCCGATATTACTCATCAAGCAATTTT 57.549 30.769 0.00 0.00 0.00 1.82
606 1805 4.568072 AAATTTTATTGCCAAGGACCCC 57.432 40.909 0.00 0.00 0.00 4.95
607 1806 1.551452 TTTTATTGCCAAGGACCCCG 58.449 50.000 0.00 0.00 0.00 5.73
608 1807 0.699399 TTTATTGCCAAGGACCCCGA 59.301 50.000 0.00 0.00 0.00 5.14
609 1808 0.699399 TTATTGCCAAGGACCCCGAA 59.301 50.000 0.00 0.00 0.00 4.30
610 1809 0.699399 TATTGCCAAGGACCCCGAAA 59.301 50.000 0.00 0.00 0.00 3.46
611 1810 0.898326 ATTGCCAAGGACCCCGAAAC 60.898 55.000 0.00 0.00 0.00 2.78
612 1811 3.053896 GCCAAGGACCCCGAAACG 61.054 66.667 0.00 0.00 0.00 3.60
613 1812 2.745037 CCAAGGACCCCGAAACGA 59.255 61.111 0.00 0.00 0.00 3.85
614 1813 1.375523 CCAAGGACCCCGAAACGAG 60.376 63.158 0.00 0.00 0.00 4.18
615 1814 1.375523 CAAGGACCCCGAAACGAGG 60.376 63.158 0.00 0.00 0.00 4.63
632 1831 4.747218 GGGGGACGCCATGTTTTA 57.253 55.556 11.16 0.00 34.11 1.52
633 1832 2.186155 GGGGGACGCCATGTTTTAC 58.814 57.895 11.16 0.00 34.11 2.01
634 1833 0.609681 GGGGGACGCCATGTTTTACA 60.610 55.000 11.16 0.00 34.11 2.41
635 1834 0.808755 GGGGACGCCATGTTTTACAG 59.191 55.000 3.14 0.00 0.00 2.74
636 1835 0.170339 GGGACGCCATGTTTTACAGC 59.830 55.000 0.00 0.00 0.00 4.40
637 1836 0.878416 GGACGCCATGTTTTACAGCA 59.122 50.000 0.00 0.00 0.00 4.41
638 1837 1.135689 GGACGCCATGTTTTACAGCAG 60.136 52.381 0.00 0.00 0.00 4.24
639 1838 1.535462 GACGCCATGTTTTACAGCAGT 59.465 47.619 0.00 0.00 0.00 4.40
640 1839 1.953686 ACGCCATGTTTTACAGCAGTT 59.046 42.857 0.00 0.00 0.00 3.16
641 1840 2.360801 ACGCCATGTTTTACAGCAGTTT 59.639 40.909 0.00 0.00 0.00 2.66
642 1841 3.181480 ACGCCATGTTTTACAGCAGTTTT 60.181 39.130 0.00 0.00 0.00 2.43
643 1842 3.425193 CGCCATGTTTTACAGCAGTTTTC 59.575 43.478 0.00 0.00 0.00 2.29
644 1843 3.740832 GCCATGTTTTACAGCAGTTTTCC 59.259 43.478 0.00 0.00 0.00 3.13
645 1844 4.739137 GCCATGTTTTACAGCAGTTTTCCA 60.739 41.667 0.00 0.00 0.00 3.53
646 1845 5.540911 CCATGTTTTACAGCAGTTTTCCAT 58.459 37.500 0.00 0.00 0.00 3.41
647 1846 5.406175 CCATGTTTTACAGCAGTTTTCCATG 59.594 40.000 0.00 0.00 0.00 3.66
648 1847 5.843673 TGTTTTACAGCAGTTTTCCATGA 57.156 34.783 0.00 0.00 0.00 3.07
649 1848 6.214191 TGTTTTACAGCAGTTTTCCATGAA 57.786 33.333 0.00 0.00 0.00 2.57
650 1849 6.634805 TGTTTTACAGCAGTTTTCCATGAAA 58.365 32.000 0.00 0.00 0.00 2.69
651 1850 6.756074 TGTTTTACAGCAGTTTTCCATGAAAG 59.244 34.615 0.00 0.00 32.93 2.62
652 1851 6.707440 TTTACAGCAGTTTTCCATGAAAGA 57.293 33.333 0.00 0.00 32.93 2.52
653 1852 4.843220 ACAGCAGTTTTCCATGAAAGAG 57.157 40.909 0.00 0.00 32.93 2.85
654 1853 4.464008 ACAGCAGTTTTCCATGAAAGAGA 58.536 39.130 0.00 0.00 32.93 3.10
655 1854 4.518211 ACAGCAGTTTTCCATGAAAGAGAG 59.482 41.667 0.00 0.00 32.93 3.20
656 1855 4.077822 AGCAGTTTTCCATGAAAGAGAGG 58.922 43.478 0.00 0.00 32.93 3.69
657 1856 3.192212 GCAGTTTTCCATGAAAGAGAGGG 59.808 47.826 0.00 0.00 32.93 4.30
658 1857 4.655963 CAGTTTTCCATGAAAGAGAGGGA 58.344 43.478 0.00 0.00 32.93 4.20
659 1858 4.699257 CAGTTTTCCATGAAAGAGAGGGAG 59.301 45.833 0.00 0.00 32.93 4.30
660 1859 4.013050 GTTTTCCATGAAAGAGAGGGAGG 58.987 47.826 0.00 0.00 32.93 4.30
661 1860 1.885049 TCCATGAAAGAGAGGGAGGG 58.115 55.000 0.00 0.00 0.00 4.30
662 1861 0.842635 CCATGAAAGAGAGGGAGGGG 59.157 60.000 0.00 0.00 0.00 4.79
663 1862 0.842635 CATGAAAGAGAGGGAGGGGG 59.157 60.000 0.00 0.00 0.00 5.40
664 1863 0.725133 ATGAAAGAGAGGGAGGGGGA 59.275 55.000 0.00 0.00 0.00 4.81
665 1864 0.496382 TGAAAGAGAGGGAGGGGGAA 59.504 55.000 0.00 0.00 0.00 3.97
666 1865 1.208706 GAAAGAGAGGGAGGGGGAAG 58.791 60.000 0.00 0.00 0.00 3.46
667 1866 0.800239 AAAGAGAGGGAGGGGGAAGA 59.200 55.000 0.00 0.00 0.00 2.87
668 1867 0.341609 AAGAGAGGGAGGGGGAAGAG 59.658 60.000 0.00 0.00 0.00 2.85
669 1868 1.074850 GAGAGGGAGGGGGAAGAGG 60.075 68.421 0.00 0.00 0.00 3.69
670 1869 1.550374 AGAGGGAGGGGGAAGAGGA 60.550 63.158 0.00 0.00 0.00 3.71
671 1870 1.162951 AGAGGGAGGGGGAAGAGGAA 61.163 60.000 0.00 0.00 0.00 3.36
672 1871 0.692756 GAGGGAGGGGGAAGAGGAAG 60.693 65.000 0.00 0.00 0.00 3.46
673 1872 1.694525 GGGAGGGGGAAGAGGAAGG 60.695 68.421 0.00 0.00 0.00 3.46
674 1873 2.379459 GGAGGGGGAAGAGGAAGGC 61.379 68.421 0.00 0.00 0.00 4.35
675 1874 1.307430 GAGGGGGAAGAGGAAGGCT 60.307 63.158 0.00 0.00 0.00 4.58
676 1875 0.031010 GAGGGGGAAGAGGAAGGCTA 60.031 60.000 0.00 0.00 0.00 3.93
677 1876 0.030603 AGGGGGAAGAGGAAGGCTAG 60.031 60.000 0.00 0.00 0.00 3.42
678 1877 0.031010 GGGGGAAGAGGAAGGCTAGA 60.031 60.000 0.00 0.00 0.00 2.43
679 1878 1.124780 GGGGAAGAGGAAGGCTAGAC 58.875 60.000 0.00 0.00 0.00 2.59
680 1879 1.343580 GGGGAAGAGGAAGGCTAGACT 60.344 57.143 0.00 0.00 0.00 3.24
681 1880 2.091222 GGGGAAGAGGAAGGCTAGACTA 60.091 54.545 0.00 0.00 0.00 2.59
682 1881 3.227614 GGGAAGAGGAAGGCTAGACTAG 58.772 54.545 0.00 5.03 0.00 2.57
683 1882 3.117436 GGGAAGAGGAAGGCTAGACTAGA 60.117 52.174 13.91 0.00 0.00 2.43
684 1883 4.448640 GGGAAGAGGAAGGCTAGACTAGAT 60.449 50.000 13.91 0.00 0.00 1.98
685 1884 4.765339 GGAAGAGGAAGGCTAGACTAGATC 59.235 50.000 13.91 7.58 0.00 2.75
686 1885 5.381757 GAAGAGGAAGGCTAGACTAGATCA 58.618 45.833 13.91 0.00 0.00 2.92
687 1886 4.985538 AGAGGAAGGCTAGACTAGATCAG 58.014 47.826 13.91 0.00 0.00 2.90
688 1887 3.496331 AGGAAGGCTAGACTAGATCAGC 58.504 50.000 13.91 0.00 33.30 4.26
689 1888 2.227865 GGAAGGCTAGACTAGATCAGCG 59.772 54.545 13.91 0.00 34.26 5.18
690 1889 1.243902 AGGCTAGACTAGATCAGCGC 58.756 55.000 13.91 0.00 34.26 5.92
691 1890 0.242555 GGCTAGACTAGATCAGCGCC 59.757 60.000 13.91 2.37 34.26 6.53
692 1891 1.243902 GCTAGACTAGATCAGCGCCT 58.756 55.000 13.91 0.00 0.00 5.52
693 1892 1.199097 GCTAGACTAGATCAGCGCCTC 59.801 57.143 13.91 0.00 0.00 4.70
694 1893 2.499197 CTAGACTAGATCAGCGCCTCA 58.501 52.381 2.29 0.00 0.00 3.86
695 1894 1.317613 AGACTAGATCAGCGCCTCAG 58.682 55.000 2.29 2.41 0.00 3.35
696 1895 0.318614 GACTAGATCAGCGCCTCAGC 60.319 60.000 2.29 0.00 37.41 4.26
710 1909 4.980903 CAGCGCACGCACCCAAAC 62.981 66.667 18.24 0.00 44.88 2.93
712 1911 4.341502 GCGCACGCACCCAAACAT 62.342 61.111 10.65 0.00 41.49 2.71
713 1912 2.126888 CGCACGCACCCAAACATC 60.127 61.111 0.00 0.00 0.00 3.06
714 1913 2.616330 CGCACGCACCCAAACATCT 61.616 57.895 0.00 0.00 0.00 2.90
715 1914 1.295357 CGCACGCACCCAAACATCTA 61.295 55.000 0.00 0.00 0.00 1.98
716 1915 0.168128 GCACGCACCCAAACATCTAC 59.832 55.000 0.00 0.00 0.00 2.59
717 1916 1.518325 CACGCACCCAAACATCTACA 58.482 50.000 0.00 0.00 0.00 2.74
718 1917 2.083774 CACGCACCCAAACATCTACAT 58.916 47.619 0.00 0.00 0.00 2.29
719 1918 2.083774 ACGCACCCAAACATCTACATG 58.916 47.619 0.00 0.00 35.92 3.21
720 1919 2.083774 CGCACCCAAACATCTACATGT 58.916 47.619 2.69 2.69 45.89 3.21
807 2006 2.289565 GGGTTCCGCTGAATTAAGGAG 58.710 52.381 0.00 0.00 33.89 3.69
834 2035 1.649664 CCTGCGAATCAGTCTTGAGG 58.350 55.000 0.00 0.00 41.25 3.86
837 2038 3.529533 CTGCGAATCAGTCTTGAGGAAT 58.470 45.455 0.00 0.00 38.02 3.01
846 2047 5.678583 TCAGTCTTGAGGAATGGAATCATC 58.321 41.667 0.00 0.00 40.07 2.92
852 2053 7.121759 GTCTTGAGGAATGGAATCATCTTTGAA 59.878 37.037 0.00 0.00 34.96 2.69
854 2055 5.889853 TGAGGAATGGAATCATCTTTGAAGG 59.110 40.000 0.00 0.00 34.96 3.46
855 2056 5.206587 AGGAATGGAATCATCTTTGAAGGG 58.793 41.667 0.00 0.00 34.96 3.95
856 2057 4.343239 GGAATGGAATCATCTTTGAAGGGG 59.657 45.833 0.00 0.00 34.96 4.79
860 2061 4.957954 TGGAATCATCTTTGAAGGGGAATG 59.042 41.667 0.00 0.00 34.96 2.67
861 2062 4.202192 GGAATCATCTTTGAAGGGGAATGC 60.202 45.833 0.00 0.00 34.96 3.56
862 2063 3.744940 TCATCTTTGAAGGGGAATGCT 57.255 42.857 0.00 0.00 0.00 3.79
864 2065 3.010472 TCATCTTTGAAGGGGAATGCTCA 59.990 43.478 0.00 0.00 0.00 4.26
865 2066 3.744940 TCTTTGAAGGGGAATGCTCAT 57.255 42.857 0.00 0.00 0.00 2.90
866 2067 4.051661 TCTTTGAAGGGGAATGCTCATT 57.948 40.909 0.00 0.00 0.00 2.57
867 2068 5.191727 TCTTTGAAGGGGAATGCTCATTA 57.808 39.130 0.00 0.00 0.00 1.90
898 2124 6.618287 TTGAAAGGAATATAATGAGCGTGG 57.382 37.500 0.00 0.00 0.00 4.94
932 2159 4.159693 TGCCTATATAATACACGCTGGGAG 59.840 45.833 0.00 0.00 0.00 4.30
933 2160 4.159879 GCCTATATAATACACGCTGGGAGT 59.840 45.833 0.00 0.00 0.00 3.85
934 2161 5.359009 GCCTATATAATACACGCTGGGAGTA 59.641 44.000 4.66 4.66 0.00 2.59
935 2162 6.679884 GCCTATATAATACACGCTGGGAGTAC 60.680 46.154 4.30 0.00 0.00 2.73
936 2163 3.637998 ATAATACACGCTGGGAGTACG 57.362 47.619 4.30 0.00 0.00 3.67
937 2164 0.179119 AATACACGCTGGGAGTACGC 60.179 55.000 4.30 0.00 0.00 4.42
938 2165 1.035932 ATACACGCTGGGAGTACGCT 61.036 55.000 4.30 0.00 0.00 5.07
939 2166 1.246056 TACACGCTGGGAGTACGCTT 61.246 55.000 0.00 0.00 0.00 4.68
940 2167 2.094659 CACGCTGGGAGTACGCTTG 61.095 63.158 0.00 0.00 0.00 4.01
941 2168 3.188786 CGCTGGGAGTACGCTTGC 61.189 66.667 0.00 0.00 0.00 4.01
942 2169 2.266055 GCTGGGAGTACGCTTGCT 59.734 61.111 0.00 0.00 0.00 3.91
943 2170 1.515954 GCTGGGAGTACGCTTGCTA 59.484 57.895 0.00 0.00 0.00 3.49
944 2171 0.528684 GCTGGGAGTACGCTTGCTAG 60.529 60.000 0.00 0.00 0.00 3.42
945 2172 0.528684 CTGGGAGTACGCTTGCTAGC 60.529 60.000 8.10 8.10 44.21 3.42
959 2186 1.002366 GCTAGCACGAACATCACCTG 58.998 55.000 10.63 0.00 0.00 4.00
977 2211 2.035704 CCTGATCTCTCTCCAATCCACG 59.964 54.545 0.00 0.00 0.00 4.94
978 2212 2.692557 CTGATCTCTCTCCAATCCACGT 59.307 50.000 0.00 0.00 0.00 4.49
979 2213 2.428530 TGATCTCTCTCCAATCCACGTG 59.571 50.000 9.08 9.08 0.00 4.49
980 2214 2.215942 TCTCTCTCCAATCCACGTGA 57.784 50.000 19.30 3.36 0.00 4.35
981 2215 2.739943 TCTCTCTCCAATCCACGTGAT 58.260 47.619 19.30 5.87 34.22 3.06
1059 2324 2.364842 TGCTGGCTCCTCCTCCTC 60.365 66.667 0.00 0.00 35.26 3.71
1060 2325 3.160748 GCTGGCTCCTCCTCCTCC 61.161 72.222 0.00 0.00 35.26 4.30
1061 2326 2.695597 CTGGCTCCTCCTCCTCCT 59.304 66.667 0.00 0.00 35.26 3.69
1062 2327 1.457455 CTGGCTCCTCCTCCTCCTC 60.457 68.421 0.00 0.00 35.26 3.71
1069 2334 1.454847 CTCCTCCTCCTCTCCCACG 60.455 68.421 0.00 0.00 0.00 4.94
1071 2336 2.360980 CTCCTCCTCTCCCACGGT 59.639 66.667 0.00 0.00 0.00 4.83
1159 2431 7.388460 GGTACGTACAGCATACTCCTATATT 57.612 40.000 26.02 0.00 0.00 1.28
1213 2494 1.233019 ATGCATGCAGGATAGAACGC 58.767 50.000 26.69 0.00 0.00 4.84
1226 2514 4.747108 GGATAGAACGCGTCTACAGTAGTA 59.253 45.833 14.44 0.00 41.75 1.82
1230 2518 3.736530 ACGCGTCTACAGTAGTAGTTG 57.263 47.619 5.58 3.64 46.30 3.16
1238 2526 6.141844 CGTCTACAGTAGTAGTTGTTTGTGTG 59.858 42.308 7.50 0.00 46.30 3.82
1239 2527 6.976925 GTCTACAGTAGTAGTTGTTTGTGTGT 59.023 38.462 7.50 0.00 46.30 3.72
1240 2528 8.131100 GTCTACAGTAGTAGTTGTTTGTGTGTA 58.869 37.037 7.50 0.00 46.30 2.90
1241 2529 8.131100 TCTACAGTAGTAGTTGTTTGTGTGTAC 58.869 37.037 7.50 0.00 46.30 2.90
1242 2530 6.870769 ACAGTAGTAGTTGTTTGTGTGTACT 58.129 36.000 0.00 0.00 0.00 2.73
1243 2531 6.755141 ACAGTAGTAGTTGTTTGTGTGTACTG 59.245 38.462 0.00 0.00 40.33 2.74
1244 2532 6.755141 CAGTAGTAGTTGTTTGTGTGTACTGT 59.245 38.462 0.00 0.00 33.33 3.55
1245 2533 6.755141 AGTAGTAGTTGTTTGTGTGTACTGTG 59.245 38.462 0.00 0.00 0.00 3.66
1246 2534 5.484715 AGTAGTTGTTTGTGTGTACTGTGT 58.515 37.500 0.00 0.00 0.00 3.72
1247 2535 6.632909 AGTAGTTGTTTGTGTGTACTGTGTA 58.367 36.000 0.00 0.00 0.00 2.90
1248 2536 7.098477 AGTAGTTGTTTGTGTGTACTGTGTAA 58.902 34.615 0.00 0.00 0.00 2.41
1249 2537 6.995511 AGTTGTTTGTGTGTACTGTGTAAT 57.004 33.333 0.00 0.00 0.00 1.89
1250 2538 6.781138 AGTTGTTTGTGTGTACTGTGTAATG 58.219 36.000 0.00 0.00 0.00 1.90
1251 2539 6.373216 AGTTGTTTGTGTGTACTGTGTAATGT 59.627 34.615 0.00 0.00 0.00 2.71
1252 2540 7.549842 AGTTGTTTGTGTGTACTGTGTAATGTA 59.450 33.333 0.00 0.00 0.00 2.29
1253 2541 8.339714 GTTGTTTGTGTGTACTGTGTAATGTAT 58.660 33.333 0.00 0.00 0.00 2.29
1254 2542 9.543783 TTGTTTGTGTGTACTGTGTAATGTATA 57.456 29.630 0.00 0.00 0.00 1.47
1255 2543 8.980610 TGTTTGTGTGTACTGTGTAATGTATAC 58.019 33.333 0.00 0.00 33.40 1.47
1256 2544 7.800015 TTGTGTGTACTGTGTAATGTATACG 57.200 36.000 0.00 0.00 34.81 3.06
1257 2545 6.912082 TGTGTGTACTGTGTAATGTATACGT 58.088 36.000 0.00 0.00 34.81 3.57
1304 2604 1.676635 GCATGTTGCAGGAGGAGCA 60.677 57.895 0.00 0.00 44.26 4.26
1406 2706 3.941836 GGATGCGGCGCTTGCTAC 61.942 66.667 33.26 14.06 39.13 3.58
1407 2707 4.285149 GATGCGGCGCTTGCTACG 62.285 66.667 33.26 11.30 39.13 3.51
1759 3081 1.536072 GCGGTGCTCATCGAGTATGAA 60.536 52.381 6.73 0.00 44.05 2.57
2007 3330 4.952071 AGTGATTCATCCGATCTGTCAT 57.048 40.909 0.00 0.00 0.00 3.06
2061 3390 3.945981 TTTGGGATAAAGGGCGTTTTC 57.054 42.857 10.73 8.07 0.00 2.29
2062 3391 2.891191 TGGGATAAAGGGCGTTTTCT 57.109 45.000 10.73 0.00 0.00 2.52
2073 3404 5.203060 AGGGCGTTTTCTATCTACTCATC 57.797 43.478 0.00 0.00 0.00 2.92
2075 3406 5.305644 AGGGCGTTTTCTATCTACTCATCAT 59.694 40.000 0.00 0.00 0.00 2.45
2076 3407 5.406780 GGGCGTTTTCTATCTACTCATCATG 59.593 44.000 0.00 0.00 0.00 3.07
2077 3408 6.216569 GGCGTTTTCTATCTACTCATCATGA 58.783 40.000 0.00 0.00 0.00 3.07
2078 3409 6.144724 GGCGTTTTCTATCTACTCATCATGAC 59.855 42.308 0.00 0.00 0.00 3.06
2079 3410 6.129326 GCGTTTTCTATCTACTCATCATGACG 60.129 42.308 0.00 0.00 0.00 4.35
2080 3411 6.913132 CGTTTTCTATCTACTCATCATGACGT 59.087 38.462 0.00 0.00 0.00 4.34
2081 3412 7.112287 CGTTTTCTATCTACTCATCATGACGTC 59.888 40.741 9.11 9.11 0.00 4.34
2082 3413 5.847670 TCTATCTACTCATCATGACGTCG 57.152 43.478 11.62 0.00 0.00 5.12
2083 3414 2.757686 TCTACTCATCATGACGTCGC 57.242 50.000 11.62 0.00 0.00 5.19
2084 3415 2.014128 TCTACTCATCATGACGTCGCA 58.986 47.619 11.62 0.00 0.00 5.10
2085 3416 2.618709 TCTACTCATCATGACGTCGCAT 59.381 45.455 11.62 0.00 0.00 4.73
2086 3417 3.813166 TCTACTCATCATGACGTCGCATA 59.187 43.478 11.62 0.00 0.00 3.14
2100 3629 3.424198 CGTCGCATACGCAATATTGTAGT 59.576 43.478 16.61 17.45 46.10 2.73
2106 3635 5.560183 GCATACGCAATATTGTAGTTCCACC 60.560 44.000 16.61 0.00 38.36 4.61
2111 3640 4.871557 GCAATATTGTAGTTCCACCGTGTA 59.128 41.667 16.61 0.00 0.00 2.90
2182 3711 4.093514 CACGCTTGACATATTTTGAGCAG 58.906 43.478 0.00 0.00 0.00 4.24
2183 3716 3.103738 CGCTTGACATATTTTGAGCAGC 58.896 45.455 0.00 0.00 0.00 5.25
2206 3741 6.542574 CAGAATTCTTGATCTGCTGGATAC 57.457 41.667 4.86 0.00 36.92 2.24
2240 3775 4.389992 TCAAGATTAATGCTATAGCTGCGC 59.610 41.667 24.61 0.00 42.66 6.09
2252 3787 1.367659 AGCTGCGCTCTTCAATCTTC 58.632 50.000 9.73 0.00 30.62 2.87
2304 3839 9.010029 CACTACACCTTGTAAATATTCCACTTT 57.990 33.333 0.00 0.00 31.67 2.66
2375 4202 6.930667 TGTAAAGTCTTTAAGGGTGTGTTC 57.069 37.500 6.61 0.00 0.00 3.18
2378 4205 1.534163 GTCTTTAAGGGTGTGTTCGGC 59.466 52.381 0.00 0.00 0.00 5.54
2379 4206 1.141254 TCTTTAAGGGTGTGTTCGGCA 59.859 47.619 0.00 0.00 0.00 5.69
2387 4265 0.038343 GTGTGTTCGGCATGCCAAAT 60.038 50.000 34.93 0.00 35.37 2.32
2441 4320 5.069781 AGCCAGTGTACTTGCCAAAATTTTA 59.930 36.000 2.44 0.00 35.44 1.52
2480 4359 2.702478 TCATTTGATTTGCCACCAACCA 59.298 40.909 0.00 0.00 0.00 3.67
2514 4396 3.801114 ACCTTGAGCCAACAAAGAAAC 57.199 42.857 0.00 0.00 0.00 2.78
2599 4481 7.238571 CCAAAATAAAGAAAATGAGCATGCAC 58.761 34.615 21.98 15.08 0.00 4.57
2634 4521 4.460382 AGACTAACGACCGAACCAAGATAA 59.540 41.667 0.00 0.00 0.00 1.75
2635 4522 5.126707 AGACTAACGACCGAACCAAGATAAT 59.873 40.000 0.00 0.00 0.00 1.28
2636 4523 5.107133 ACTAACGACCGAACCAAGATAATG 58.893 41.667 0.00 0.00 0.00 1.90
2637 4524 3.880047 ACGACCGAACCAAGATAATGA 57.120 42.857 0.00 0.00 0.00 2.57
2638 4525 3.782046 ACGACCGAACCAAGATAATGAG 58.218 45.455 0.00 0.00 0.00 2.90
2639 4526 3.194968 ACGACCGAACCAAGATAATGAGT 59.805 43.478 0.00 0.00 0.00 3.41
2640 4527 4.400251 ACGACCGAACCAAGATAATGAGTA 59.600 41.667 0.00 0.00 0.00 2.59
2641 4528 4.976731 CGACCGAACCAAGATAATGAGTAG 59.023 45.833 0.00 0.00 0.00 2.57
2642 4529 5.450137 CGACCGAACCAAGATAATGAGTAGT 60.450 44.000 0.00 0.00 0.00 2.73
2643 4530 6.238566 CGACCGAACCAAGATAATGAGTAGTA 60.239 42.308 0.00 0.00 0.00 1.82
2644 4531 6.803642 ACCGAACCAAGATAATGAGTAGTAC 58.196 40.000 0.00 0.00 0.00 2.73
2645 4532 6.606395 ACCGAACCAAGATAATGAGTAGTACT 59.394 38.462 1.37 1.37 0.00 2.73
2646 4533 7.776969 ACCGAACCAAGATAATGAGTAGTACTA 59.223 37.037 1.88 0.00 0.00 1.82
2647 4534 8.074972 CCGAACCAAGATAATGAGTAGTACTAC 58.925 40.741 23.03 23.03 36.35 2.73
2648 4535 7.797587 CGAACCAAGATAATGAGTAGTACTACG 59.202 40.741 23.87 10.11 40.80 3.51
2649 4536 7.507733 ACCAAGATAATGAGTAGTACTACGG 57.492 40.000 23.87 17.41 40.80 4.02
2650 4537 7.285566 ACCAAGATAATGAGTAGTACTACGGA 58.714 38.462 23.87 16.08 40.80 4.69
2651 4538 7.444792 ACCAAGATAATGAGTAGTACTACGGAG 59.555 40.741 23.87 0.00 40.80 4.63
2653 4540 8.497554 CAAGATAATGAGTAGTACTACGGAGTC 58.502 40.741 23.87 17.17 43.93 3.36
2654 4541 7.160726 AGATAATGAGTAGTACTACGGAGTCC 58.839 42.308 23.87 13.33 43.93 3.85
2655 4542 4.767578 ATGAGTAGTACTACGGAGTCCA 57.232 45.455 23.87 16.37 43.93 4.02
2656 4543 4.134379 TGAGTAGTACTACGGAGTCCAG 57.866 50.000 23.87 2.15 43.93 3.86
2657 4544 3.517100 TGAGTAGTACTACGGAGTCCAGT 59.483 47.826 23.87 8.67 43.93 4.00
2658 4545 4.711846 TGAGTAGTACTACGGAGTCCAGTA 59.288 45.833 23.87 7.61 43.93 2.74
2659 4546 5.163468 TGAGTAGTACTACGGAGTCCAGTAG 60.163 48.000 26.22 26.22 43.93 2.57
2668 4555 7.565323 CTACGGAGTCCAGTAGTATAAGTTT 57.435 40.000 22.62 0.00 43.93 2.66
2669 4556 6.847421 ACGGAGTCCAGTAGTATAAGTTTT 57.153 37.500 10.49 0.00 29.74 2.43
2670 4557 6.861144 ACGGAGTCCAGTAGTATAAGTTTTC 58.139 40.000 10.49 0.00 29.74 2.29
2671 4558 6.662663 ACGGAGTCCAGTAGTATAAGTTTTCT 59.337 38.462 10.49 0.00 29.74 2.52
2672 4559 7.178097 ACGGAGTCCAGTAGTATAAGTTTTCTT 59.822 37.037 10.49 0.00 29.74 2.52
2673 4560 8.033626 CGGAGTCCAGTAGTATAAGTTTTCTTT 58.966 37.037 10.49 0.00 40.91 2.52
2693 4580 8.990163 TTCTTTAATGGAAGTAAAAGGAGTGT 57.010 30.769 0.00 0.00 35.81 3.55
2694 4581 8.990163 TCTTTAATGGAAGTAAAAGGAGTGTT 57.010 30.769 0.00 0.00 35.81 3.32
2695 4582 8.846211 TCTTTAATGGAAGTAAAAGGAGTGTTG 58.154 33.333 0.00 0.00 35.81 3.33
2696 4583 7.519032 TTAATGGAAGTAAAAGGAGTGTTGG 57.481 36.000 0.00 0.00 0.00 3.77
2697 4584 3.827722 TGGAAGTAAAAGGAGTGTTGGG 58.172 45.455 0.00 0.00 0.00 4.12
2698 4585 3.460340 TGGAAGTAAAAGGAGTGTTGGGA 59.540 43.478 0.00 0.00 0.00 4.37
2699 4586 4.105697 TGGAAGTAAAAGGAGTGTTGGGAT 59.894 41.667 0.00 0.00 0.00 3.85
2700 4587 4.459337 GGAAGTAAAAGGAGTGTTGGGATG 59.541 45.833 0.00 0.00 0.00 3.51
2701 4588 3.421844 AGTAAAAGGAGTGTTGGGATGC 58.578 45.455 0.00 0.00 0.00 3.91
2702 4589 1.632589 AAAAGGAGTGTTGGGATGCC 58.367 50.000 0.00 0.00 0.00 4.40
2703 4590 0.609131 AAAGGAGTGTTGGGATGCCG 60.609 55.000 0.00 0.00 0.00 5.69
2704 4591 1.779061 AAGGAGTGTTGGGATGCCGT 61.779 55.000 0.00 0.00 0.00 5.68
2705 4592 1.303317 GGAGTGTTGGGATGCCGTT 60.303 57.895 0.00 0.00 0.00 4.44
2706 4593 0.893727 GGAGTGTTGGGATGCCGTTT 60.894 55.000 0.00 0.00 0.00 3.60
2707 4594 1.612199 GGAGTGTTGGGATGCCGTTTA 60.612 52.381 0.00 0.00 0.00 2.01
2708 4595 2.156098 GAGTGTTGGGATGCCGTTTAA 58.844 47.619 0.00 0.00 0.00 1.52
2709 4596 1.883926 AGTGTTGGGATGCCGTTTAAC 59.116 47.619 0.00 0.00 0.00 2.01
2710 4597 1.609555 GTGTTGGGATGCCGTTTAACA 59.390 47.619 3.17 3.17 0.00 2.41
2711 4598 1.609555 TGTTGGGATGCCGTTTAACAC 59.390 47.619 3.17 0.00 0.00 3.32
2728 4615 8.744011 CGTTTAACACGTAAATGAAAAATTCCA 58.256 29.630 0.00 0.00 44.49 3.53
2731 4618 7.883229 AACACGTAAATGAAAAATTCCATCC 57.117 32.000 0.00 0.00 0.00 3.51
2732 4619 6.394809 ACACGTAAATGAAAAATTCCATCCC 58.605 36.000 0.00 0.00 0.00 3.85
2733 4620 6.015010 ACACGTAAATGAAAAATTCCATCCCA 60.015 34.615 0.00 0.00 0.00 4.37
2734 4621 6.870965 CACGTAAATGAAAAATTCCATCCCAA 59.129 34.615 0.00 0.00 0.00 4.12
2735 4622 7.386299 CACGTAAATGAAAAATTCCATCCCAAA 59.614 33.333 0.00 0.00 0.00 3.28
2736 4623 7.934120 ACGTAAATGAAAAATTCCATCCCAAAA 59.066 29.630 0.00 0.00 0.00 2.44
2737 4624 8.442384 CGTAAATGAAAAATTCCATCCCAAAAG 58.558 33.333 0.00 0.00 0.00 2.27
2738 4625 9.500785 GTAAATGAAAAATTCCATCCCAAAAGA 57.499 29.630 0.00 0.00 0.00 2.52
2740 4627 8.570068 AATGAAAAATTCCATCCCAAAAGATG 57.430 30.769 0.00 0.00 42.79 2.90
2741 4628 7.077050 TGAAAAATTCCATCCCAAAAGATGT 57.923 32.000 1.26 0.00 41.79 3.06
2742 4629 7.516452 TGAAAAATTCCATCCCAAAAGATGTT 58.484 30.769 1.26 0.00 41.79 2.71
2743 4630 7.661027 TGAAAAATTCCATCCCAAAAGATGTTC 59.339 33.333 1.26 0.00 41.79 3.18
2744 4631 4.989279 ATTCCATCCCAAAAGATGTTCG 57.011 40.909 1.26 0.00 41.79 3.95
2745 4632 2.722094 TCCATCCCAAAAGATGTTCGG 58.278 47.619 1.26 0.00 41.79 4.30
2746 4633 2.041081 TCCATCCCAAAAGATGTTCGGT 59.959 45.455 1.26 0.00 41.79 4.69
2747 4634 3.264706 TCCATCCCAAAAGATGTTCGGTA 59.735 43.478 1.26 0.00 41.79 4.02
2748 4635 4.013728 CCATCCCAAAAGATGTTCGGTAA 58.986 43.478 1.26 0.00 41.79 2.85
2749 4636 4.096382 CCATCCCAAAAGATGTTCGGTAAG 59.904 45.833 1.26 0.00 41.79 2.34
2750 4637 3.681593 TCCCAAAAGATGTTCGGTAAGG 58.318 45.455 0.00 0.00 0.00 2.69
2751 4638 2.752903 CCCAAAAGATGTTCGGTAAGGG 59.247 50.000 0.00 0.00 0.00 3.95
2752 4639 2.163613 CCAAAAGATGTTCGGTAAGGGC 59.836 50.000 0.00 0.00 0.00 5.19
2753 4640 2.817258 CAAAAGATGTTCGGTAAGGGCA 59.183 45.455 0.00 0.00 0.00 5.36
2754 4641 3.366052 AAAGATGTTCGGTAAGGGCAT 57.634 42.857 0.00 0.00 0.00 4.40
2755 4642 2.332063 AGATGTTCGGTAAGGGCATG 57.668 50.000 0.00 0.00 0.00 4.06
2756 4643 1.559682 AGATGTTCGGTAAGGGCATGT 59.440 47.619 0.00 0.00 0.00 3.21
2757 4644 2.769663 AGATGTTCGGTAAGGGCATGTA 59.230 45.455 0.00 0.00 0.00 2.29
2758 4645 2.389962 TGTTCGGTAAGGGCATGTAC 57.610 50.000 0.00 0.00 0.00 2.90
2759 4646 1.624312 TGTTCGGTAAGGGCATGTACA 59.376 47.619 0.00 0.00 0.00 2.90
2760 4647 2.038689 TGTTCGGTAAGGGCATGTACAA 59.961 45.455 0.00 0.00 0.00 2.41
2761 4648 3.275999 GTTCGGTAAGGGCATGTACAAT 58.724 45.455 0.00 0.00 0.00 2.71
2762 4649 2.912771 TCGGTAAGGGCATGTACAATG 58.087 47.619 0.00 0.12 0.00 2.82
2763 4650 1.946768 CGGTAAGGGCATGTACAATGG 59.053 52.381 0.00 0.00 0.00 3.16
2764 4651 2.682563 CGGTAAGGGCATGTACAATGGT 60.683 50.000 0.00 0.00 0.00 3.55
2765 4652 2.687935 GGTAAGGGCATGTACAATGGTG 59.312 50.000 0.00 0.00 0.00 4.17
2766 4653 1.185315 AAGGGCATGTACAATGGTGC 58.815 50.000 10.12 10.12 36.88 5.01
2767 4654 0.332632 AGGGCATGTACAATGGTGCT 59.667 50.000 16.47 0.00 37.70 4.40
2768 4655 1.563879 AGGGCATGTACAATGGTGCTA 59.436 47.619 16.47 0.00 37.70 3.49
2769 4656 2.175499 AGGGCATGTACAATGGTGCTAT 59.825 45.455 16.47 5.35 37.70 2.97
2770 4657 2.554032 GGGCATGTACAATGGTGCTATC 59.446 50.000 16.47 3.12 37.70 2.08
2771 4658 3.480470 GGCATGTACAATGGTGCTATCT 58.520 45.455 16.47 0.00 37.70 1.98
2772 4659 3.885297 GGCATGTACAATGGTGCTATCTT 59.115 43.478 16.47 0.00 37.70 2.40
2773 4660 5.063204 GGCATGTACAATGGTGCTATCTTA 58.937 41.667 16.47 0.00 37.70 2.10
2774 4661 5.180117 GGCATGTACAATGGTGCTATCTTAG 59.820 44.000 16.47 0.00 37.70 2.18
2775 4662 5.180117 GCATGTACAATGGTGCTATCTTAGG 59.820 44.000 11.12 0.00 34.85 2.69
2776 4663 6.524734 CATGTACAATGGTGCTATCTTAGGA 58.475 40.000 0.00 0.00 0.00 2.94
2777 4664 6.161855 TGTACAATGGTGCTATCTTAGGAG 57.838 41.667 0.00 0.00 0.00 3.69
2778 4665 5.661312 TGTACAATGGTGCTATCTTAGGAGT 59.339 40.000 0.00 0.00 0.00 3.85
2779 4666 5.028549 ACAATGGTGCTATCTTAGGAGTG 57.971 43.478 0.00 0.00 0.00 3.51
2780 4667 3.760580 ATGGTGCTATCTTAGGAGTGC 57.239 47.619 0.00 0.00 0.00 4.40
2781 4668 1.762957 TGGTGCTATCTTAGGAGTGCC 59.237 52.381 0.70 0.00 0.00 5.01
2782 4669 1.762957 GGTGCTATCTTAGGAGTGCCA 59.237 52.381 0.00 0.00 36.29 4.92
2783 4670 2.370189 GGTGCTATCTTAGGAGTGCCAT 59.630 50.000 0.00 0.00 36.29 4.40
2784 4671 3.397482 GTGCTATCTTAGGAGTGCCATG 58.603 50.000 0.00 0.00 36.29 3.66
2785 4672 3.041211 TGCTATCTTAGGAGTGCCATGT 58.959 45.455 0.00 0.00 36.29 3.21
2786 4673 4.039245 GTGCTATCTTAGGAGTGCCATGTA 59.961 45.833 0.00 0.00 36.29 2.29
2787 4674 4.281941 TGCTATCTTAGGAGTGCCATGTAG 59.718 45.833 0.00 0.00 36.29 2.74
2788 4675 4.322349 GCTATCTTAGGAGTGCCATGTAGG 60.322 50.000 0.00 0.00 41.84 3.18
2789 4676 3.398318 TCTTAGGAGTGCCATGTAGGA 57.602 47.619 0.00 0.00 41.22 2.94
2790 4677 3.928754 TCTTAGGAGTGCCATGTAGGAT 58.071 45.455 0.00 0.00 41.22 3.24
2791 4678 5.074746 TCTTAGGAGTGCCATGTAGGATA 57.925 43.478 0.00 0.00 41.22 2.59
2792 4679 5.464069 TCTTAGGAGTGCCATGTAGGATAA 58.536 41.667 0.00 0.00 41.22 1.75
2793 4680 5.903010 TCTTAGGAGTGCCATGTAGGATAAA 59.097 40.000 0.00 0.00 41.22 1.40
2794 4681 6.558775 TCTTAGGAGTGCCATGTAGGATAAAT 59.441 38.462 0.00 0.00 41.22 1.40
2795 4682 4.978099 AGGAGTGCCATGTAGGATAAATG 58.022 43.478 0.00 0.00 41.22 2.32
2796 4683 4.660303 AGGAGTGCCATGTAGGATAAATGA 59.340 41.667 0.00 0.00 38.63 2.57
2797 4684 5.311649 AGGAGTGCCATGTAGGATAAATGAT 59.688 40.000 0.00 0.00 38.63 2.45
2798 4685 5.413833 GGAGTGCCATGTAGGATAAATGATG 59.586 44.000 0.00 0.00 38.63 3.07
2799 4686 6.191657 AGTGCCATGTAGGATAAATGATGA 57.808 37.500 0.00 0.00 38.63 2.92
2800 4687 6.236409 AGTGCCATGTAGGATAAATGATGAG 58.764 40.000 0.00 0.00 38.63 2.90
2801 4688 5.413833 GTGCCATGTAGGATAAATGATGAGG 59.586 44.000 0.00 0.00 38.63 3.86
2802 4689 5.073554 TGCCATGTAGGATAAATGATGAGGT 59.926 40.000 0.00 0.00 38.63 3.85
2803 4690 5.413833 GCCATGTAGGATAAATGATGAGGTG 59.586 44.000 0.00 0.00 38.63 4.00
2804 4691 5.942236 CCATGTAGGATAAATGATGAGGTGG 59.058 44.000 0.00 0.00 38.63 4.61
2805 4692 6.239973 CCATGTAGGATAAATGATGAGGTGGA 60.240 42.308 0.00 0.00 38.63 4.02
2806 4693 6.425210 TGTAGGATAAATGATGAGGTGGAG 57.575 41.667 0.00 0.00 0.00 3.86
2807 4694 4.989875 AGGATAAATGATGAGGTGGAGG 57.010 45.455 0.00 0.00 0.00 4.30
2808 4695 4.570926 AGGATAAATGATGAGGTGGAGGA 58.429 43.478 0.00 0.00 0.00 3.71
2809 4696 4.596643 AGGATAAATGATGAGGTGGAGGAG 59.403 45.833 0.00 0.00 0.00 3.69
2810 4697 4.594920 GGATAAATGATGAGGTGGAGGAGA 59.405 45.833 0.00 0.00 0.00 3.71
2811 4698 5.279910 GGATAAATGATGAGGTGGAGGAGAG 60.280 48.000 0.00 0.00 0.00 3.20
2812 4699 3.411454 AATGATGAGGTGGAGGAGAGA 57.589 47.619 0.00 0.00 0.00 3.10
2813 4700 2.450867 TGATGAGGTGGAGGAGAGAG 57.549 55.000 0.00 0.00 0.00 3.20
2814 4701 1.925959 TGATGAGGTGGAGGAGAGAGA 59.074 52.381 0.00 0.00 0.00 3.10
2815 4702 2.313041 TGATGAGGTGGAGGAGAGAGAA 59.687 50.000 0.00 0.00 0.00 2.87
2816 4703 2.223803 TGAGGTGGAGGAGAGAGAAC 57.776 55.000 0.00 0.00 0.00 3.01
2817 4704 1.713647 TGAGGTGGAGGAGAGAGAACT 59.286 52.381 0.00 0.00 0.00 3.01
2818 4705 2.291282 TGAGGTGGAGGAGAGAGAACTC 60.291 54.545 0.00 0.00 42.90 3.01
2819 4706 1.713647 AGGTGGAGGAGAGAGAACTCA 59.286 52.381 4.64 0.00 44.79 3.41
2820 4707 2.314549 AGGTGGAGGAGAGAGAACTCAT 59.685 50.000 4.64 0.00 44.79 2.90
2821 4708 3.529734 AGGTGGAGGAGAGAGAACTCATA 59.470 47.826 4.64 0.00 44.79 2.15
2822 4709 4.017037 AGGTGGAGGAGAGAGAACTCATAA 60.017 45.833 4.64 0.00 44.79 1.90
2823 4710 4.340950 GGTGGAGGAGAGAGAACTCATAAG 59.659 50.000 4.64 0.00 44.79 1.73
2824 4711 5.197451 GTGGAGGAGAGAGAACTCATAAGA 58.803 45.833 4.64 0.00 44.79 2.10
2825 4712 5.654650 GTGGAGGAGAGAGAACTCATAAGAA 59.345 44.000 4.64 0.00 44.79 2.52
2826 4713 6.153680 GTGGAGGAGAGAGAACTCATAAGAAA 59.846 42.308 4.64 0.00 44.79 2.52
2827 4714 6.726299 TGGAGGAGAGAGAACTCATAAGAAAA 59.274 38.462 4.64 0.00 44.79 2.29
2828 4715 7.235606 TGGAGGAGAGAGAACTCATAAGAAAAA 59.764 37.037 4.64 0.00 44.79 1.94
2873 4760 8.279970 AGATAGGACAAGAGATGATATCTTCG 57.720 38.462 11.73 0.00 40.38 3.79
2874 4761 5.132897 AGGACAAGAGATGATATCTTCGC 57.867 43.478 12.58 12.58 40.38 4.70
2875 4762 4.586421 AGGACAAGAGATGATATCTTCGCA 59.414 41.667 19.66 0.00 40.38 5.10
2876 4763 4.683781 GGACAAGAGATGATATCTTCGCAC 59.316 45.833 19.66 12.35 40.38 5.34
2877 4764 5.268118 ACAAGAGATGATATCTTCGCACA 57.732 39.130 19.66 0.00 40.38 4.57
2878 4765 5.664457 ACAAGAGATGATATCTTCGCACAA 58.336 37.500 19.66 0.00 40.38 3.33
2879 4766 6.286758 ACAAGAGATGATATCTTCGCACAAT 58.713 36.000 19.66 1.53 40.38 2.71
2880 4767 7.436933 ACAAGAGATGATATCTTCGCACAATA 58.563 34.615 19.66 0.00 40.38 1.90
2881 4768 8.093307 ACAAGAGATGATATCTTCGCACAATAT 58.907 33.333 19.66 0.33 40.38 1.28
2882 4769 8.381387 CAAGAGATGATATCTTCGCACAATATG 58.619 37.037 19.66 8.45 40.38 1.78
2883 4770 7.609960 AGAGATGATATCTTCGCACAATATGT 58.390 34.615 19.66 0.00 40.38 2.29
2884 4771 7.544915 AGAGATGATATCTTCGCACAATATGTG 59.455 37.037 19.66 6.13 44.69 3.21
2885 4772 7.157347 AGATGATATCTTCGCACAATATGTGT 58.843 34.615 11.70 0.00 42.83 3.72
2886 4773 7.330454 AGATGATATCTTCGCACAATATGTGTC 59.670 37.037 11.70 4.15 42.83 3.67
2895 4782 4.481930 CACAATATGTGTCACCACGTTT 57.518 40.909 0.00 0.00 44.92 3.60
2896 4783 4.854399 CACAATATGTGTCACCACGTTTT 58.146 39.130 0.00 0.00 44.92 2.43
2897 4784 5.277825 CACAATATGTGTCACCACGTTTTT 58.722 37.500 0.00 0.00 44.92 1.94
2898 4785 6.431278 CACAATATGTGTCACCACGTTTTTA 58.569 36.000 0.00 0.00 44.92 1.52
2899 4786 6.577055 CACAATATGTGTCACCACGTTTTTAG 59.423 38.462 0.00 0.00 44.92 1.85
2900 4787 5.873179 ATATGTGTCACCACGTTTTTAGG 57.127 39.130 0.00 0.00 44.92 2.69
2901 4788 3.263489 TGTGTCACCACGTTTTTAGGA 57.737 42.857 0.00 0.00 44.92 2.94
2902 4789 3.199677 TGTGTCACCACGTTTTTAGGAG 58.800 45.455 0.00 0.00 44.92 3.69
2903 4790 3.200483 GTGTCACCACGTTTTTAGGAGT 58.800 45.455 0.00 0.00 0.00 3.85
2904 4791 4.141981 TGTGTCACCACGTTTTTAGGAGTA 60.142 41.667 0.00 0.00 44.92 2.59
2905 4792 4.810491 GTGTCACCACGTTTTTAGGAGTAA 59.190 41.667 0.00 0.00 0.00 2.24
2906 4793 4.810491 TGTCACCACGTTTTTAGGAGTAAC 59.190 41.667 0.00 0.00 0.00 2.50
2907 4794 5.052481 GTCACCACGTTTTTAGGAGTAACT 58.948 41.667 0.00 0.00 0.00 2.24
2908 4795 6.183360 TGTCACCACGTTTTTAGGAGTAACTA 60.183 38.462 0.00 0.00 0.00 2.24
2909 4796 6.364435 GTCACCACGTTTTTAGGAGTAACTAG 59.636 42.308 0.00 0.00 0.00 2.57
2910 4797 6.040842 TCACCACGTTTTTAGGAGTAACTAGT 59.959 38.462 0.00 0.00 0.00 2.57
2911 4798 6.703165 CACCACGTTTTTAGGAGTAACTAGTT 59.297 38.462 13.68 13.68 0.00 2.24
2912 4799 7.867403 CACCACGTTTTTAGGAGTAACTAGTTA 59.133 37.037 11.38 11.38 0.00 2.24
2913 4800 8.588472 ACCACGTTTTTAGGAGTAACTAGTTAT 58.412 33.333 18.03 7.76 0.00 1.89
2937 4824 8.926092 ATAAAGATAAGGCTAAGAAATGACCC 57.074 34.615 0.00 0.00 0.00 4.46
2938 4825 5.975988 AGATAAGGCTAAGAAATGACCCA 57.024 39.130 0.00 0.00 0.00 4.51
2939 4826 6.521527 AGATAAGGCTAAGAAATGACCCAT 57.478 37.500 0.00 0.00 0.00 4.00
2940 4827 6.915786 AGATAAGGCTAAGAAATGACCCATT 58.084 36.000 0.00 0.00 35.39 3.16
2941 4828 6.774656 AGATAAGGCTAAGAAATGACCCATTG 59.225 38.462 0.00 0.00 34.04 2.82
2942 4829 4.322057 AGGCTAAGAAATGACCCATTGT 57.678 40.909 0.00 0.00 34.04 2.71
2943 4830 5.450818 AGGCTAAGAAATGACCCATTGTA 57.549 39.130 0.00 0.00 34.04 2.41
2944 4831 5.440610 AGGCTAAGAAATGACCCATTGTAG 58.559 41.667 0.00 0.00 34.04 2.74
2945 4832 5.191722 AGGCTAAGAAATGACCCATTGTAGA 59.808 40.000 0.00 0.00 34.04 2.59
2946 4833 5.297029 GGCTAAGAAATGACCCATTGTAGAC 59.703 44.000 0.00 0.00 34.04 2.59
2947 4834 5.880332 GCTAAGAAATGACCCATTGTAGACA 59.120 40.000 0.00 0.00 34.04 3.41
2948 4835 6.543831 GCTAAGAAATGACCCATTGTAGACAT 59.456 38.462 0.00 0.00 34.04 3.06
2949 4836 7.067494 GCTAAGAAATGACCCATTGTAGACATT 59.933 37.037 0.00 0.00 34.04 2.71
2950 4837 7.781324 AAGAAATGACCCATTGTAGACATTT 57.219 32.000 0.00 0.00 39.51 2.32
2951 4838 7.781324 AGAAATGACCCATTGTAGACATTTT 57.219 32.000 0.00 0.00 37.82 1.82
2952 4839 8.193953 AGAAATGACCCATTGTAGACATTTTT 57.806 30.769 0.00 0.00 37.82 1.94
2978 4865 9.844790 TTTTGTCATCTCTTAATTACATGCAAG 57.155 29.630 0.00 0.00 0.00 4.01
2979 4866 8.791327 TTGTCATCTCTTAATTACATGCAAGA 57.209 30.769 0.00 0.00 0.00 3.02
2980 4867 8.201554 TGTCATCTCTTAATTACATGCAAGAC 57.798 34.615 0.00 0.00 0.00 3.01
2981 4868 7.280876 TGTCATCTCTTAATTACATGCAAGACC 59.719 37.037 0.00 0.00 0.00 3.85
2982 4869 7.497249 GTCATCTCTTAATTACATGCAAGACCT 59.503 37.037 0.00 0.00 0.00 3.85
2983 4870 8.704668 TCATCTCTTAATTACATGCAAGACCTA 58.295 33.333 0.00 0.00 0.00 3.08
2984 4871 9.330063 CATCTCTTAATTACATGCAAGACCTAA 57.670 33.333 0.00 0.00 0.00 2.69
2985 4872 8.948631 TCTCTTAATTACATGCAAGACCTAAG 57.051 34.615 0.00 0.00 0.00 2.18
2986 4873 8.758829 TCTCTTAATTACATGCAAGACCTAAGA 58.241 33.333 0.00 2.16 0.00 2.10
2987 4874 9.553064 CTCTTAATTACATGCAAGACCTAAGAT 57.447 33.333 0.00 0.00 0.00 2.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 8.553459 TGGTTGTGTTGTTTCAACATAAAATT 57.447 26.923 20.07 0.00 43.64 1.82
2 3 9.088512 GTATGGTTGTGTTGTTTCAACATAAAA 57.911 29.630 20.07 14.34 43.64 1.52
3 4 8.470805 AGTATGGTTGTGTTGTTTCAACATAAA 58.529 29.630 20.07 14.10 43.64 1.40
4 5 8.001881 AGTATGGTTGTGTTGTTTCAACATAA 57.998 30.769 16.38 16.42 43.64 1.90
5 6 7.575414 AGTATGGTTGTGTTGTTTCAACATA 57.425 32.000 16.38 12.02 43.64 2.29
6 7 6.463995 AGTATGGTTGTGTTGTTTCAACAT 57.536 33.333 16.38 4.54 43.64 2.71
7 8 5.906113 AGTATGGTTGTGTTGTTTCAACA 57.094 34.783 10.63 10.63 43.64 3.33
8 9 8.690680 TTTAAGTATGGTTGTGTTGTTTCAAC 57.309 30.769 5.78 5.78 41.88 3.18
9 10 9.307121 CATTTAAGTATGGTTGTGTTGTTTCAA 57.693 29.630 0.00 0.00 0.00 2.69
10 11 8.470805 ACATTTAAGTATGGTTGTGTTGTTTCA 58.529 29.630 0.00 0.00 0.00 2.69
11 12 8.865590 ACATTTAAGTATGGTTGTGTTGTTTC 57.134 30.769 0.00 0.00 0.00 2.78
12 13 8.470805 TGACATTTAAGTATGGTTGTGTTGTTT 58.529 29.630 0.00 0.00 0.00 2.83
21 22 4.929479 TGGGCTGACATTTAAGTATGGTT 58.071 39.130 0.00 0.00 0.00 3.67
28 29 5.235186 CGTCTCTATTGGGCTGACATTTAAG 59.765 44.000 0.00 0.00 0.00 1.85
46 47 4.158579 TGACTCACTATGCATTTCGTCTCT 59.841 41.667 3.54 0.00 0.00 3.10
47 48 4.424626 TGACTCACTATGCATTTCGTCTC 58.575 43.478 3.54 0.00 0.00 3.36
51 52 3.193263 AGCTGACTCACTATGCATTTCG 58.807 45.455 3.54 0.00 0.00 3.46
67 68 7.471041 ACTCCTATGTGGTCTATTATAGCTGA 58.529 38.462 0.00 0.00 37.07 4.26
81 82 9.840427 CACTTTTTATTTTGTACTCCTATGTGG 57.160 33.333 0.00 0.00 37.10 4.17
86 87 8.789762 GGCTTCACTTTTTATTTTGTACTCCTA 58.210 33.333 0.00 0.00 0.00 2.94
88 89 6.866770 GGGCTTCACTTTTTATTTTGTACTCC 59.133 38.462 0.00 0.00 0.00 3.85
89 90 7.658261 AGGGCTTCACTTTTTATTTTGTACTC 58.342 34.615 0.00 0.00 0.00 2.59
90 91 7.597288 AGGGCTTCACTTTTTATTTTGTACT 57.403 32.000 0.00 0.00 0.00 2.73
91 92 9.923143 ATTAGGGCTTCACTTTTTATTTTGTAC 57.077 29.630 0.00 0.00 0.00 2.90
142 198 8.784043 GTCCACACATAAATTAGAAGTGACTTT 58.216 33.333 0.00 0.00 34.47 2.66
145 201 7.519002 GTGTCCACACATAAATTAGAAGTGAC 58.481 38.462 4.92 0.00 45.75 3.67
161 218 3.418684 AAGATTACAGGGTGTCCACAC 57.581 47.619 0.85 0.85 45.72 3.82
240 1439 7.339212 TGGCTAGCATTGTTCATAACTTTGTAT 59.661 33.333 18.24 0.00 0.00 2.29
256 1455 6.605995 TCGTACCTATATGTATGGCTAGCATT 59.394 38.462 18.24 5.42 0.00 3.56
274 1473 2.951642 TCGGACGGAAATTATCGTACCT 59.048 45.455 9.28 0.00 39.88 3.08
276 1475 5.107722 GGAAATCGGACGGAAATTATCGTAC 60.108 44.000 6.07 5.95 39.88 3.67
279 1478 3.805422 TGGAAATCGGACGGAAATTATCG 59.195 43.478 0.00 0.00 0.00 2.92
583 1782 5.670485 GGGGTCCTTGGCAATAAAATTTAG 58.330 41.667 0.00 0.00 0.00 1.85
584 1783 4.160626 CGGGGTCCTTGGCAATAAAATTTA 59.839 41.667 0.00 0.00 0.00 1.40
585 1784 3.055458 CGGGGTCCTTGGCAATAAAATTT 60.055 43.478 0.00 0.00 0.00 1.82
586 1785 2.499693 CGGGGTCCTTGGCAATAAAATT 59.500 45.455 0.00 0.00 0.00 1.82
587 1786 2.107366 CGGGGTCCTTGGCAATAAAAT 58.893 47.619 0.00 0.00 0.00 1.82
588 1787 1.075698 TCGGGGTCCTTGGCAATAAAA 59.924 47.619 0.00 0.00 0.00 1.52
589 1788 0.699399 TCGGGGTCCTTGGCAATAAA 59.301 50.000 0.00 0.00 0.00 1.40
590 1789 0.699399 TTCGGGGTCCTTGGCAATAA 59.301 50.000 0.00 0.00 0.00 1.40
591 1790 0.699399 TTTCGGGGTCCTTGGCAATA 59.301 50.000 0.00 0.00 0.00 1.90
592 1791 0.898326 GTTTCGGGGTCCTTGGCAAT 60.898 55.000 0.00 0.00 0.00 3.56
593 1792 1.529713 GTTTCGGGGTCCTTGGCAA 60.530 57.895 0.00 0.00 0.00 4.52
594 1793 2.114411 GTTTCGGGGTCCTTGGCA 59.886 61.111 0.00 0.00 0.00 4.92
595 1794 3.053896 CGTTTCGGGGTCCTTGGC 61.054 66.667 0.00 0.00 0.00 4.52
596 1795 1.375523 CTCGTTTCGGGGTCCTTGG 60.376 63.158 0.00 0.00 0.00 3.61
597 1796 1.375523 CCTCGTTTCGGGGTCCTTG 60.376 63.158 0.00 0.00 43.41 3.61
598 1797 3.066198 CCTCGTTTCGGGGTCCTT 58.934 61.111 0.00 0.00 43.41 3.36
615 1814 0.609681 TGTAAAACATGGCGTCCCCC 60.610 55.000 0.00 0.00 0.00 5.40
616 1815 0.808755 CTGTAAAACATGGCGTCCCC 59.191 55.000 0.00 0.00 0.00 4.81
617 1816 0.170339 GCTGTAAAACATGGCGTCCC 59.830 55.000 0.00 0.00 0.00 4.46
618 1817 0.878416 TGCTGTAAAACATGGCGTCC 59.122 50.000 0.00 0.00 0.00 4.79
619 1818 1.535462 ACTGCTGTAAAACATGGCGTC 59.465 47.619 0.00 0.00 0.00 5.19
620 1819 1.604604 ACTGCTGTAAAACATGGCGT 58.395 45.000 0.00 0.00 0.00 5.68
621 1820 2.704725 AACTGCTGTAAAACATGGCG 57.295 45.000 0.00 0.00 0.00 5.69
622 1821 3.740832 GGAAAACTGCTGTAAAACATGGC 59.259 43.478 0.00 0.00 0.00 4.40
623 1822 4.942852 TGGAAAACTGCTGTAAAACATGG 58.057 39.130 0.00 0.00 0.00 3.66
624 1823 6.215121 TCATGGAAAACTGCTGTAAAACATG 58.785 36.000 17.42 17.42 34.80 3.21
625 1824 6.403866 TCATGGAAAACTGCTGTAAAACAT 57.596 33.333 0.00 0.00 0.00 2.71
626 1825 5.843673 TCATGGAAAACTGCTGTAAAACA 57.156 34.783 0.00 0.00 0.00 2.83
627 1826 6.978080 TCTTTCATGGAAAACTGCTGTAAAAC 59.022 34.615 0.00 0.00 30.84 2.43
628 1827 7.068103 TCTCTTTCATGGAAAACTGCTGTAAAA 59.932 33.333 0.00 0.00 30.84 1.52
629 1828 6.545666 TCTCTTTCATGGAAAACTGCTGTAAA 59.454 34.615 0.00 0.00 30.84 2.01
630 1829 6.061441 TCTCTTTCATGGAAAACTGCTGTAA 58.939 36.000 0.00 0.00 30.84 2.41
631 1830 5.620206 TCTCTTTCATGGAAAACTGCTGTA 58.380 37.500 0.00 0.00 30.84 2.74
632 1831 4.464008 TCTCTTTCATGGAAAACTGCTGT 58.536 39.130 0.00 0.00 30.84 4.40
633 1832 4.082895 CCTCTCTTTCATGGAAAACTGCTG 60.083 45.833 0.00 0.00 30.84 4.41
634 1833 4.077822 CCTCTCTTTCATGGAAAACTGCT 58.922 43.478 0.00 0.00 30.84 4.24
635 1834 3.192212 CCCTCTCTTTCATGGAAAACTGC 59.808 47.826 0.00 0.00 30.84 4.40
636 1835 4.655963 TCCCTCTCTTTCATGGAAAACTG 58.344 43.478 0.00 0.00 30.84 3.16
637 1836 4.263683 CCTCCCTCTCTTTCATGGAAAACT 60.264 45.833 0.00 0.00 30.84 2.66
638 1837 4.013050 CCTCCCTCTCTTTCATGGAAAAC 58.987 47.826 0.00 0.00 30.84 2.43
639 1838 3.010584 CCCTCCCTCTCTTTCATGGAAAA 59.989 47.826 0.00 0.00 30.84 2.29
640 1839 2.578021 CCCTCCCTCTCTTTCATGGAAA 59.422 50.000 0.00 0.00 0.00 3.13
641 1840 2.200081 CCCTCCCTCTCTTTCATGGAA 58.800 52.381 0.00 0.00 0.00 3.53
642 1841 1.626350 CCCCTCCCTCTCTTTCATGGA 60.626 57.143 0.00 0.00 0.00 3.41
643 1842 0.842635 CCCCTCCCTCTCTTTCATGG 59.157 60.000 0.00 0.00 0.00 3.66
644 1843 0.842635 CCCCCTCCCTCTCTTTCATG 59.157 60.000 0.00 0.00 0.00 3.07
645 1844 0.725133 TCCCCCTCCCTCTCTTTCAT 59.275 55.000 0.00 0.00 0.00 2.57
646 1845 0.496382 TTCCCCCTCCCTCTCTTTCA 59.504 55.000 0.00 0.00 0.00 2.69
647 1846 1.208706 CTTCCCCCTCCCTCTCTTTC 58.791 60.000 0.00 0.00 0.00 2.62
648 1847 0.800239 TCTTCCCCCTCCCTCTCTTT 59.200 55.000 0.00 0.00 0.00 2.52
649 1848 0.341609 CTCTTCCCCCTCCCTCTCTT 59.658 60.000 0.00 0.00 0.00 2.85
650 1849 1.598856 CCTCTTCCCCCTCCCTCTCT 61.599 65.000 0.00 0.00 0.00 3.10
651 1850 1.074850 CCTCTTCCCCCTCCCTCTC 60.075 68.421 0.00 0.00 0.00 3.20
652 1851 1.162951 TTCCTCTTCCCCCTCCCTCT 61.163 60.000 0.00 0.00 0.00 3.69
653 1852 0.692756 CTTCCTCTTCCCCCTCCCTC 60.693 65.000 0.00 0.00 0.00 4.30
654 1853 1.398234 CTTCCTCTTCCCCCTCCCT 59.602 63.158 0.00 0.00 0.00 4.20
655 1854 1.694525 CCTTCCTCTTCCCCCTCCC 60.695 68.421 0.00 0.00 0.00 4.30
656 1855 2.379459 GCCTTCCTCTTCCCCCTCC 61.379 68.421 0.00 0.00 0.00 4.30
657 1856 0.031010 TAGCCTTCCTCTTCCCCCTC 60.031 60.000 0.00 0.00 0.00 4.30
658 1857 0.030603 CTAGCCTTCCTCTTCCCCCT 60.031 60.000 0.00 0.00 0.00 4.79
659 1858 0.031010 TCTAGCCTTCCTCTTCCCCC 60.031 60.000 0.00 0.00 0.00 5.40
660 1859 1.124780 GTCTAGCCTTCCTCTTCCCC 58.875 60.000 0.00 0.00 0.00 4.81
661 1860 2.168458 AGTCTAGCCTTCCTCTTCCC 57.832 55.000 0.00 0.00 0.00 3.97
662 1861 4.173290 TCTAGTCTAGCCTTCCTCTTCC 57.827 50.000 1.60 0.00 0.00 3.46
663 1862 5.381757 TGATCTAGTCTAGCCTTCCTCTTC 58.618 45.833 1.60 0.00 0.00 2.87
664 1863 5.385198 CTGATCTAGTCTAGCCTTCCTCTT 58.615 45.833 1.60 0.00 0.00 2.85
665 1864 4.749785 GCTGATCTAGTCTAGCCTTCCTCT 60.750 50.000 1.60 0.00 0.00 3.69
666 1865 3.506067 GCTGATCTAGTCTAGCCTTCCTC 59.494 52.174 1.60 0.00 0.00 3.71
667 1866 3.496331 GCTGATCTAGTCTAGCCTTCCT 58.504 50.000 1.60 0.00 0.00 3.36
668 1867 2.227865 CGCTGATCTAGTCTAGCCTTCC 59.772 54.545 1.60 0.00 31.45 3.46
669 1868 2.351350 GCGCTGATCTAGTCTAGCCTTC 60.351 54.545 0.00 0.65 31.45 3.46
670 1869 1.611491 GCGCTGATCTAGTCTAGCCTT 59.389 52.381 0.00 0.00 31.45 4.35
671 1870 1.243902 GCGCTGATCTAGTCTAGCCT 58.756 55.000 0.00 0.00 31.45 4.58
672 1871 0.242555 GGCGCTGATCTAGTCTAGCC 59.757 60.000 7.64 0.00 35.47 3.93
673 1872 1.199097 GAGGCGCTGATCTAGTCTAGC 59.801 57.143 7.64 0.00 0.00 3.42
674 1873 2.483877 CTGAGGCGCTGATCTAGTCTAG 59.516 54.545 7.64 0.00 0.00 2.43
675 1874 2.499197 CTGAGGCGCTGATCTAGTCTA 58.501 52.381 7.64 0.00 0.00 2.59
676 1875 1.317613 CTGAGGCGCTGATCTAGTCT 58.682 55.000 7.64 0.00 0.00 3.24
677 1876 0.318614 GCTGAGGCGCTGATCTAGTC 60.319 60.000 7.64 0.00 0.00 2.59
678 1877 1.739049 GCTGAGGCGCTGATCTAGT 59.261 57.895 7.64 0.00 0.00 2.57
679 1878 4.651585 GCTGAGGCGCTGATCTAG 57.348 61.111 7.64 5.36 0.00 2.43
693 1892 4.980903 GTTTGGGTGCGTGCGCTG 62.981 66.667 17.49 1.66 42.51 5.18
695 1894 4.341502 ATGTTTGGGTGCGTGCGC 62.342 61.111 9.85 9.85 42.35 6.09
696 1895 1.295357 TAGATGTTTGGGTGCGTGCG 61.295 55.000 0.00 0.00 0.00 5.34
697 1896 0.168128 GTAGATGTTTGGGTGCGTGC 59.832 55.000 0.00 0.00 0.00 5.34
698 1897 1.518325 TGTAGATGTTTGGGTGCGTG 58.482 50.000 0.00 0.00 0.00 5.34
699 1898 2.083774 CATGTAGATGTTTGGGTGCGT 58.916 47.619 0.00 0.00 0.00 5.24
700 1899 2.083774 ACATGTAGATGTTTGGGTGCG 58.916 47.619 0.00 0.00 40.05 5.34
709 1908 6.486320 TGTTTGATGACACAACATGTAGATGT 59.514 34.615 0.00 3.84 43.56 3.06
710 1909 6.901265 TGTTTGATGACACAACATGTAGATG 58.099 36.000 0.00 0.00 43.56 2.90
711 1910 7.509141 TTGTTTGATGACACAACATGTAGAT 57.491 32.000 0.00 0.00 43.56 1.98
712 1911 6.934048 TTGTTTGATGACACAACATGTAGA 57.066 33.333 0.00 0.00 43.56 2.59
713 1912 8.578308 AAATTGTTTGATGACACAACATGTAG 57.422 30.769 0.00 0.00 43.56 2.74
716 1915 7.953173 GCATAAATTGTTTGATGACACAACATG 59.047 33.333 0.00 0.00 35.75 3.21
717 1916 7.656542 TGCATAAATTGTTTGATGACACAACAT 59.343 29.630 0.00 0.00 35.75 2.71
718 1917 6.982724 TGCATAAATTGTTTGATGACACAACA 59.017 30.769 0.00 0.00 35.75 3.33
719 1918 7.405469 TGCATAAATTGTTTGATGACACAAC 57.595 32.000 0.00 0.00 35.75 3.32
720 1919 8.496751 CAATGCATAAATTGTTTGATGACACAA 58.503 29.630 0.00 0.00 37.31 3.33
721 1920 7.117956 CCAATGCATAAATTGTTTGATGACACA 59.882 33.333 0.00 0.00 36.06 3.72
722 1921 7.331440 TCCAATGCATAAATTGTTTGATGACAC 59.669 33.333 0.00 0.00 36.06 3.67
723 1922 7.384477 TCCAATGCATAAATTGTTTGATGACA 58.616 30.769 0.00 0.00 36.06 3.58
724 1923 7.464977 GCTCCAATGCATAAATTGTTTGATGAC 60.465 37.037 0.00 0.00 36.06 3.06
725 1924 6.535865 GCTCCAATGCATAAATTGTTTGATGA 59.464 34.615 0.00 0.00 36.06 2.92
726 1925 6.314152 TGCTCCAATGCATAAATTGTTTGATG 59.686 34.615 0.00 0.00 38.12 3.07
727 1926 6.408035 TGCTCCAATGCATAAATTGTTTGAT 58.592 32.000 0.00 0.00 38.12 2.57
728 1927 5.791666 TGCTCCAATGCATAAATTGTTTGA 58.208 33.333 0.00 0.00 38.12 2.69
729 1928 6.483385 TTGCTCCAATGCATAAATTGTTTG 57.517 33.333 0.00 0.00 42.96 2.93
730 1929 7.690952 ATTTGCTCCAATGCATAAATTGTTT 57.309 28.000 0.00 0.00 42.96 2.83
731 1930 8.667463 GTTATTTGCTCCAATGCATAAATTGTT 58.333 29.630 0.00 0.00 42.96 2.83
752 1951 9.796180 ATTCTAGGTAGTACGATCTGAGTTATT 57.204 33.333 0.00 0.00 0.00 1.40
755 1954 7.281098 TGATTCTAGGTAGTACGATCTGAGTT 58.719 38.462 0.00 0.00 0.00 3.01
759 1958 5.413213 CCCTGATTCTAGGTAGTACGATCTG 59.587 48.000 0.00 0.00 36.02 2.90
834 2035 5.203528 TCCCCTTCAAAGATGATTCCATTC 58.796 41.667 0.00 0.00 34.96 2.67
837 2038 4.673328 TTCCCCTTCAAAGATGATTCCA 57.327 40.909 0.00 0.00 34.96 3.53
846 2047 6.294397 GCTATAATGAGCATTCCCCTTCAAAG 60.294 42.308 0.00 0.00 42.36 2.77
873 2099 7.390440 CCCACGCTCATTATATTCCTTTCAATA 59.610 37.037 0.00 0.00 0.00 1.90
898 2124 1.490574 ATATAGGCAGGCCGAGATCC 58.509 55.000 4.37 0.00 41.95 3.36
937 2164 1.394917 GGTGATGTTCGTGCTAGCAAG 59.605 52.381 21.29 22.14 0.00 4.01
938 2165 1.001974 AGGTGATGTTCGTGCTAGCAA 59.998 47.619 21.29 3.23 0.00 3.91
939 2166 0.608130 AGGTGATGTTCGTGCTAGCA 59.392 50.000 14.93 14.93 0.00 3.49
940 2167 1.002366 CAGGTGATGTTCGTGCTAGC 58.998 55.000 8.10 8.10 0.00 3.42
941 2168 2.654749 TCAGGTGATGTTCGTGCTAG 57.345 50.000 0.00 0.00 0.00 3.42
942 2169 2.760650 AGATCAGGTGATGTTCGTGCTA 59.239 45.455 0.00 0.00 34.37 3.49
943 2170 1.552337 AGATCAGGTGATGTTCGTGCT 59.448 47.619 0.00 0.00 34.37 4.40
944 2171 1.929836 GAGATCAGGTGATGTTCGTGC 59.070 52.381 0.00 0.00 34.37 5.34
945 2172 3.130164 AGAGAGATCAGGTGATGTTCGTG 59.870 47.826 0.00 0.00 34.37 4.35
946 2173 3.360867 AGAGAGATCAGGTGATGTTCGT 58.639 45.455 0.00 0.00 34.37 3.85
947 2174 3.243367 GGAGAGAGATCAGGTGATGTTCG 60.243 52.174 0.00 0.00 34.37 3.95
948 2175 3.703556 TGGAGAGAGATCAGGTGATGTTC 59.296 47.826 0.00 0.00 34.37 3.18
949 2176 3.717576 TGGAGAGAGATCAGGTGATGTT 58.282 45.455 0.00 0.00 34.37 2.71
959 2186 2.690497 TCACGTGGATTGGAGAGAGATC 59.310 50.000 17.00 0.00 0.00 2.75
977 2211 1.687494 GCGCAGTGAAGGACGATCAC 61.687 60.000 0.30 0.00 45.94 3.06
978 2212 1.446099 GCGCAGTGAAGGACGATCA 60.446 57.895 0.30 0.00 0.00 2.92
979 2213 2.508891 CGCGCAGTGAAGGACGATC 61.509 63.158 8.75 0.00 43.07 3.69
980 2214 2.507102 CGCGCAGTGAAGGACGAT 60.507 61.111 8.75 0.00 43.07 3.73
1059 2324 2.352032 GGAGACACCGTGGGAGAGG 61.352 68.421 3.03 0.00 0.00 3.69
1060 2325 3.289525 GGAGACACCGTGGGAGAG 58.710 66.667 3.03 0.00 0.00 3.20
1069 2334 4.083862 GGACCAGCCGGAGACACC 62.084 72.222 5.05 0.00 35.59 4.16
1095 2360 4.992511 GGGCCGTACCACGTTGCA 62.993 66.667 0.00 0.00 40.58 4.08
1146 2411 9.237846 CGTACATGCATACAATATAGGAGTATG 57.762 37.037 0.00 13.53 44.83 2.39
1154 2426 5.462405 TGCGTCGTACATGCATACAATATA 58.538 37.500 0.00 0.00 42.48 0.86
1155 2427 4.303282 TGCGTCGTACATGCATACAATAT 58.697 39.130 0.00 0.00 42.48 1.28
1159 2431 3.723554 TGCGTCGTACATGCATACA 57.276 47.368 0.00 0.00 42.48 2.29
1194 2475 1.233019 GCGTTCTATCCTGCATGCAT 58.767 50.000 22.97 9.42 0.00 3.96
1207 2488 3.594134 ACTACTACTGTAGACGCGTTCT 58.406 45.455 21.01 14.61 46.76 3.01
1213 2494 6.141844 CACACAAACAACTACTACTGTAGACG 59.858 42.308 21.01 12.77 46.76 4.18
1226 2514 6.373216 ACATTACACAGTACACACAAACAACT 59.627 34.615 0.00 0.00 0.00 3.16
1230 2518 8.157813 CGTATACATTACACAGTACACACAAAC 58.842 37.037 3.32 0.00 0.00 2.93
1238 2526 9.358123 CGTTAGTACGTATACATTACACAGTAC 57.642 37.037 0.00 4.79 42.72 2.73
1250 2538 8.642200 GCACATGCTTGCGTTAGTACGTATAC 62.642 46.154 0.00 0.00 41.92 1.47
1251 2539 6.736313 GCACATGCTTGCGTTAGTACGTATA 61.736 44.000 0.00 0.00 41.92 1.47
1252 2540 6.009195 GCACATGCTTGCGTTAGTACGTAT 62.009 45.833 0.00 0.00 41.92 3.06
1253 2541 4.755562 GCACATGCTTGCGTTAGTACGTA 61.756 47.826 0.00 0.00 42.97 3.57
1254 2542 4.051457 GCACATGCTTGCGTTAGTACGT 62.051 50.000 0.00 0.00 42.97 3.57
1255 2543 1.526986 GCACATGCTTGCGTTAGTACG 60.527 52.381 0.00 0.00 43.45 3.67
1256 2544 1.463056 TGCACATGCTTGCGTTAGTAC 59.537 47.619 5.31 0.00 46.20 2.73
1257 2545 1.802069 TGCACATGCTTGCGTTAGTA 58.198 45.000 5.31 0.00 46.20 1.82
1298 2598 2.687200 TGGTACCCGCATGCTCCT 60.687 61.111 17.13 0.00 0.00 3.69
1406 2706 0.674581 TGGAGCTGCATTTCACCTCG 60.675 55.000 2.72 0.00 29.91 4.63
1407 2707 1.538047 TTGGAGCTGCATTTCACCTC 58.462 50.000 9.39 0.00 0.00 3.85
2013 3336 4.989168 GGCTCGACTAATTAACATGGGTAG 59.011 45.833 0.00 0.00 0.00 3.18
2061 3390 4.083802 TGCGACGTCATGATGAGTAGATAG 60.084 45.833 21.75 0.00 0.00 2.08
2062 3391 3.813166 TGCGACGTCATGATGAGTAGATA 59.187 43.478 21.75 3.08 0.00 1.98
2081 3412 8.669712 GGTGGAACTACAATATTGCGTATGCG 62.670 46.154 15.48 0.00 40.22 4.73
2082 3413 5.440685 GTGGAACTACAATATTGCGTATGC 58.559 41.667 15.48 0.00 43.20 3.14
2083 3414 5.333035 CGGTGGAACTACAATATTGCGTATG 60.333 44.000 15.48 4.18 36.74 2.39
2084 3415 4.748102 CGGTGGAACTACAATATTGCGTAT 59.252 41.667 15.48 0.00 36.74 3.06
2085 3416 4.114073 CGGTGGAACTACAATATTGCGTA 58.886 43.478 15.48 0.75 36.74 4.42
2086 3417 2.933906 CGGTGGAACTACAATATTGCGT 59.066 45.455 15.48 9.91 36.74 5.24
2093 3622 4.082081 TCGATTACACGGTGGAACTACAAT 60.082 41.667 8.18 0.00 36.74 2.71
2095 3624 2.819019 TCGATTACACGGTGGAACTACA 59.181 45.455 8.18 0.00 36.74 2.74
2098 3627 1.067354 GGTCGATTACACGGTGGAACT 60.067 52.381 8.18 0.00 36.74 3.01
2100 3629 1.259609 AGGTCGATTACACGGTGGAA 58.740 50.000 8.48 8.48 0.00 3.53
2106 3635 4.921470 ACAAATCAAGGTCGATTACACG 57.079 40.909 0.00 0.00 34.49 4.49
2111 3640 9.886132 AACTACTATTACAAATCAAGGTCGATT 57.114 29.630 0.00 0.00 37.20 3.34
2159 3688 3.501828 TGCTCAAAATATGTCAAGCGTGT 59.498 39.130 0.00 0.00 30.92 4.49
2183 3716 5.469421 GGTATCCAGCAGATCAAGAATTCTG 59.531 44.000 9.17 3.74 41.84 3.02
2235 3770 0.649475 CGGAAGATTGAAGAGCGCAG 59.351 55.000 11.47 0.00 0.00 5.18
2252 3787 9.931210 GATCTTCAACCTAAATTTATTACACGG 57.069 33.333 0.00 0.00 0.00 4.94
2268 3803 4.642429 ACAAGGTGTAGTGATCTTCAACC 58.358 43.478 0.00 0.00 30.55 3.77
2281 3816 9.452287 GGTAAAGTGGAATATTTACAAGGTGTA 57.548 33.333 9.32 0.00 41.53 2.90
2304 3839 9.566432 TTACTTGGATAAAACTTTAAACCGGTA 57.434 29.630 8.00 0.00 0.00 4.02
2355 3890 3.881089 CCGAACACACCCTTAAAGACTTT 59.119 43.478 5.62 5.62 0.00 2.66
2387 4265 5.353678 CCAAACAATTCTGTCTTGCCAAAAA 59.646 36.000 0.00 0.00 33.45 1.94
2455 4334 5.241285 GGTTGGTGGCAAATCAAATGAAATT 59.759 36.000 0.00 0.00 38.98 1.82
2480 4359 2.821969 CTCAAGGTACATTTGGCAGCTT 59.178 45.455 8.84 0.00 0.00 3.74
2570 4452 7.599630 TGCTCATTTTCTTTATTTTGGCATC 57.400 32.000 0.00 0.00 0.00 3.91
2584 4466 6.037500 TCTGTATGTAGTGCATGCTCATTTTC 59.962 38.462 20.33 11.51 40.27 2.29
2599 4481 5.050904 CGGTCGTTAGTCTCTCTGTATGTAG 60.051 48.000 0.00 0.00 0.00 2.74
2634 4521 4.163839 ACTGGACTCCGTAGTACTACTCAT 59.836 45.833 26.36 12.16 37.47 2.90
2635 4522 3.517100 ACTGGACTCCGTAGTACTACTCA 59.483 47.826 26.36 14.02 37.47 3.41
2636 4523 4.135747 ACTGGACTCCGTAGTACTACTC 57.864 50.000 26.36 17.99 37.47 2.59
2637 4524 4.714308 ACTACTGGACTCCGTAGTACTACT 59.286 45.833 26.36 11.21 39.78 2.57
2638 4525 5.017294 ACTACTGGACTCCGTAGTACTAC 57.983 47.826 21.06 21.06 39.78 2.73
2639 4526 6.985653 ATACTACTGGACTCCGTAGTACTA 57.014 41.667 25.78 15.84 42.47 1.82
2640 4527 5.885449 ATACTACTGGACTCCGTAGTACT 57.115 43.478 25.78 18.04 42.47 2.73
2641 4528 7.213678 ACTTATACTACTGGACTCCGTAGTAC 58.786 42.308 25.78 0.94 42.47 2.73
2642 4529 7.366847 ACTTATACTACTGGACTCCGTAGTA 57.633 40.000 25.62 25.62 43.07 1.82
2643 4530 6.245890 ACTTATACTACTGGACTCCGTAGT 57.754 41.667 24.01 24.01 42.07 2.73
2644 4531 7.565323 AAACTTATACTACTGGACTCCGTAG 57.435 40.000 18.15 18.15 37.00 3.51
2645 4532 7.831193 AGAAAACTTATACTACTGGACTCCGTA 59.169 37.037 0.00 0.00 0.00 4.02
2646 4533 6.662663 AGAAAACTTATACTACTGGACTCCGT 59.337 38.462 0.00 0.00 0.00 4.69
2647 4534 7.098074 AGAAAACTTATACTACTGGACTCCG 57.902 40.000 0.00 0.00 0.00 4.63
2667 4554 9.416284 ACACTCCTTTTACTTCCATTAAAGAAA 57.584 29.630 0.00 0.00 30.97 2.52
2668 4555 8.990163 ACACTCCTTTTACTTCCATTAAAGAA 57.010 30.769 0.00 0.00 30.97 2.52
2669 4556 8.846211 CAACACTCCTTTTACTTCCATTAAAGA 58.154 33.333 0.00 0.00 30.97 2.52
2670 4557 8.082242 CCAACACTCCTTTTACTTCCATTAAAG 58.918 37.037 0.00 0.00 0.00 1.85
2671 4558 7.014808 CCCAACACTCCTTTTACTTCCATTAAA 59.985 37.037 0.00 0.00 0.00 1.52
2672 4559 6.492087 CCCAACACTCCTTTTACTTCCATTAA 59.508 38.462 0.00 0.00 0.00 1.40
2673 4560 6.007703 CCCAACACTCCTTTTACTTCCATTA 58.992 40.000 0.00 0.00 0.00 1.90
2674 4561 4.832823 CCCAACACTCCTTTTACTTCCATT 59.167 41.667 0.00 0.00 0.00 3.16
2675 4562 4.105697 TCCCAACACTCCTTTTACTTCCAT 59.894 41.667 0.00 0.00 0.00 3.41
2676 4563 3.460340 TCCCAACACTCCTTTTACTTCCA 59.540 43.478 0.00 0.00 0.00 3.53
2677 4564 4.094830 TCCCAACACTCCTTTTACTTCC 57.905 45.455 0.00 0.00 0.00 3.46
2678 4565 4.082733 GCATCCCAACACTCCTTTTACTTC 60.083 45.833 0.00 0.00 0.00 3.01
2679 4566 3.826729 GCATCCCAACACTCCTTTTACTT 59.173 43.478 0.00 0.00 0.00 2.24
2680 4567 3.421844 GCATCCCAACACTCCTTTTACT 58.578 45.455 0.00 0.00 0.00 2.24
2681 4568 2.492088 GGCATCCCAACACTCCTTTTAC 59.508 50.000 0.00 0.00 0.00 2.01
2682 4569 2.802719 GGCATCCCAACACTCCTTTTA 58.197 47.619 0.00 0.00 0.00 1.52
2683 4570 1.632589 GGCATCCCAACACTCCTTTT 58.367 50.000 0.00 0.00 0.00 2.27
2684 4571 0.609131 CGGCATCCCAACACTCCTTT 60.609 55.000 0.00 0.00 0.00 3.11
2685 4572 1.002134 CGGCATCCCAACACTCCTT 60.002 57.895 0.00 0.00 0.00 3.36
2686 4573 1.779061 AACGGCATCCCAACACTCCT 61.779 55.000 0.00 0.00 0.00 3.69
2687 4574 0.893727 AAACGGCATCCCAACACTCC 60.894 55.000 0.00 0.00 0.00 3.85
2688 4575 1.816074 TAAACGGCATCCCAACACTC 58.184 50.000 0.00 0.00 0.00 3.51
2689 4576 1.883926 GTTAAACGGCATCCCAACACT 59.116 47.619 0.00 0.00 0.00 3.55
2690 4577 1.609555 TGTTAAACGGCATCCCAACAC 59.390 47.619 0.00 0.00 0.00 3.32
2691 4578 1.609555 GTGTTAAACGGCATCCCAACA 59.390 47.619 0.00 0.00 0.00 3.33
2692 4579 2.341318 GTGTTAAACGGCATCCCAAC 57.659 50.000 0.00 0.00 0.00 3.77
2705 4592 9.413048 GGATGGAATTTTTCATTTACGTGTTAA 57.587 29.630 0.00 0.00 0.00 2.01
2706 4593 8.030106 GGGATGGAATTTTTCATTTACGTGTTA 58.970 33.333 0.00 0.00 0.00 2.41
2707 4594 6.871492 GGGATGGAATTTTTCATTTACGTGTT 59.129 34.615 0.00 0.00 0.00 3.32
2708 4595 6.015010 TGGGATGGAATTTTTCATTTACGTGT 60.015 34.615 0.00 0.00 0.00 4.49
2709 4596 6.393990 TGGGATGGAATTTTTCATTTACGTG 58.606 36.000 0.00 0.00 0.00 4.49
2710 4597 6.597832 TGGGATGGAATTTTTCATTTACGT 57.402 33.333 0.00 0.00 0.00 3.57
2711 4598 7.897575 TTTGGGATGGAATTTTTCATTTACG 57.102 32.000 0.00 0.00 0.00 3.18
2712 4599 9.500785 TCTTTTGGGATGGAATTTTTCATTTAC 57.499 29.630 0.00 0.00 0.00 2.01
2714 4601 9.016438 CATCTTTTGGGATGGAATTTTTCATTT 57.984 29.630 0.00 0.00 39.33 2.32
2715 4602 8.165397 ACATCTTTTGGGATGGAATTTTTCATT 58.835 29.630 8.91 0.00 45.11 2.57
2716 4603 7.692172 ACATCTTTTGGGATGGAATTTTTCAT 58.308 30.769 8.91 0.00 45.11 2.57
2717 4604 7.077050 ACATCTTTTGGGATGGAATTTTTCA 57.923 32.000 8.91 0.00 45.11 2.69
2718 4605 7.148590 CGAACATCTTTTGGGATGGAATTTTTC 60.149 37.037 8.91 2.72 45.11 2.29
2719 4606 6.650390 CGAACATCTTTTGGGATGGAATTTTT 59.350 34.615 8.91 0.00 45.11 1.94
2720 4607 6.165577 CGAACATCTTTTGGGATGGAATTTT 58.834 36.000 8.91 0.00 45.11 1.82
2721 4608 5.337491 CCGAACATCTTTTGGGATGGAATTT 60.337 40.000 8.91 0.00 45.11 1.82
2722 4609 4.160252 CCGAACATCTTTTGGGATGGAATT 59.840 41.667 8.91 0.00 45.11 2.17
2723 4610 3.701040 CCGAACATCTTTTGGGATGGAAT 59.299 43.478 8.91 0.00 45.11 3.01
2724 4611 3.088532 CCGAACATCTTTTGGGATGGAA 58.911 45.455 8.91 0.00 45.11 3.53
2725 4612 2.041081 ACCGAACATCTTTTGGGATGGA 59.959 45.455 8.91 0.00 45.11 3.41
2726 4613 2.446435 ACCGAACATCTTTTGGGATGG 58.554 47.619 8.91 0.00 45.11 3.51
2727 4614 4.096382 CCTTACCGAACATCTTTTGGGATG 59.904 45.833 0.00 0.00 45.96 3.51
2728 4615 4.270008 CCTTACCGAACATCTTTTGGGAT 58.730 43.478 0.00 0.00 0.00 3.85
2729 4616 3.560453 CCCTTACCGAACATCTTTTGGGA 60.560 47.826 0.00 0.00 33.14 4.37
2730 4617 2.752903 CCCTTACCGAACATCTTTTGGG 59.247 50.000 0.00 0.00 0.00 4.12
2731 4618 2.163613 GCCCTTACCGAACATCTTTTGG 59.836 50.000 0.00 0.00 0.00 3.28
2732 4619 2.817258 TGCCCTTACCGAACATCTTTTG 59.183 45.455 0.00 0.00 0.00 2.44
2733 4620 3.149005 TGCCCTTACCGAACATCTTTT 57.851 42.857 0.00 0.00 0.00 2.27
2734 4621 2.871096 TGCCCTTACCGAACATCTTT 57.129 45.000 0.00 0.00 0.00 2.52
2735 4622 2.026262 ACATGCCCTTACCGAACATCTT 60.026 45.455 0.00 0.00 0.00 2.40
2736 4623 1.559682 ACATGCCCTTACCGAACATCT 59.440 47.619 0.00 0.00 0.00 2.90
2737 4624 2.038387 ACATGCCCTTACCGAACATC 57.962 50.000 0.00 0.00 0.00 3.06
2738 4625 2.237643 TGTACATGCCCTTACCGAACAT 59.762 45.455 0.00 0.00 0.00 2.71
2739 4626 1.624312 TGTACATGCCCTTACCGAACA 59.376 47.619 0.00 0.00 0.00 3.18
2740 4627 2.389962 TGTACATGCCCTTACCGAAC 57.610 50.000 0.00 0.00 0.00 3.95
2741 4628 3.275143 CATTGTACATGCCCTTACCGAA 58.725 45.455 0.00 0.00 0.00 4.30
2742 4629 2.420827 CCATTGTACATGCCCTTACCGA 60.421 50.000 0.00 0.00 0.00 4.69
2743 4630 1.946768 CCATTGTACATGCCCTTACCG 59.053 52.381 0.00 0.00 0.00 4.02
2744 4631 2.687935 CACCATTGTACATGCCCTTACC 59.312 50.000 0.00 0.00 0.00 2.85
2745 4632 2.099098 GCACCATTGTACATGCCCTTAC 59.901 50.000 7.77 0.00 31.71 2.34
2746 4633 2.025416 AGCACCATTGTACATGCCCTTA 60.025 45.455 14.08 0.00 38.92 2.69
2747 4634 1.185315 GCACCATTGTACATGCCCTT 58.815 50.000 7.77 0.00 31.71 3.95
2748 4635 0.332632 AGCACCATTGTACATGCCCT 59.667 50.000 14.08 0.00 38.92 5.19
2749 4636 2.051334 TAGCACCATTGTACATGCCC 57.949 50.000 14.08 0.00 38.92 5.36
2750 4637 3.480470 AGATAGCACCATTGTACATGCC 58.520 45.455 14.08 1.71 38.92 4.40
2751 4638 5.180117 CCTAAGATAGCACCATTGTACATGC 59.820 44.000 10.53 10.53 38.39 4.06
2752 4639 6.524734 TCCTAAGATAGCACCATTGTACATG 58.475 40.000 0.00 0.00 0.00 3.21
2753 4640 6.327626 ACTCCTAAGATAGCACCATTGTACAT 59.672 38.462 0.00 0.00 0.00 2.29
2754 4641 5.661312 ACTCCTAAGATAGCACCATTGTACA 59.339 40.000 0.00 0.00 0.00 2.90
2755 4642 5.986135 CACTCCTAAGATAGCACCATTGTAC 59.014 44.000 0.00 0.00 0.00 2.90
2756 4643 5.453339 GCACTCCTAAGATAGCACCATTGTA 60.453 44.000 0.00 0.00 0.00 2.41
2757 4644 4.684485 GCACTCCTAAGATAGCACCATTGT 60.684 45.833 0.00 0.00 0.00 2.71
2758 4645 3.812053 GCACTCCTAAGATAGCACCATTG 59.188 47.826 0.00 0.00 0.00 2.82
2759 4646 3.181450 GGCACTCCTAAGATAGCACCATT 60.181 47.826 0.00 0.00 0.00 3.16
2760 4647 2.370189 GGCACTCCTAAGATAGCACCAT 59.630 50.000 0.00 0.00 0.00 3.55
2761 4648 1.762957 GGCACTCCTAAGATAGCACCA 59.237 52.381 0.00 0.00 0.00 4.17
2762 4649 1.762957 TGGCACTCCTAAGATAGCACC 59.237 52.381 0.00 0.00 0.00 5.01
2763 4650 3.181461 ACATGGCACTCCTAAGATAGCAC 60.181 47.826 0.00 0.00 0.00 4.40
2764 4651 3.041211 ACATGGCACTCCTAAGATAGCA 58.959 45.455 0.00 0.00 0.00 3.49
2765 4652 3.760580 ACATGGCACTCCTAAGATAGC 57.239 47.619 0.00 0.00 0.00 2.97
2766 4653 5.080337 TCCTACATGGCACTCCTAAGATAG 58.920 45.833 0.00 0.00 35.26 2.08
2767 4654 5.074746 TCCTACATGGCACTCCTAAGATA 57.925 43.478 0.00 0.00 35.26 1.98
2768 4655 3.928754 TCCTACATGGCACTCCTAAGAT 58.071 45.455 0.00 0.00 35.26 2.40
2769 4656 3.398318 TCCTACATGGCACTCCTAAGA 57.602 47.619 0.00 0.00 35.26 2.10
2770 4657 5.808366 TTATCCTACATGGCACTCCTAAG 57.192 43.478 0.00 0.00 35.26 2.18
2771 4658 6.328934 TCATTTATCCTACATGGCACTCCTAA 59.671 38.462 0.00 0.00 35.26 2.69
2772 4659 5.843969 TCATTTATCCTACATGGCACTCCTA 59.156 40.000 0.00 0.00 35.26 2.94
2773 4660 4.660303 TCATTTATCCTACATGGCACTCCT 59.340 41.667 0.00 0.00 35.26 3.69
2774 4661 4.973168 TCATTTATCCTACATGGCACTCC 58.027 43.478 0.00 0.00 35.26 3.85
2775 4662 6.233434 TCATCATTTATCCTACATGGCACTC 58.767 40.000 0.00 0.00 35.26 3.51
2776 4663 6.191657 TCATCATTTATCCTACATGGCACT 57.808 37.500 0.00 0.00 35.26 4.40
2777 4664 5.413833 CCTCATCATTTATCCTACATGGCAC 59.586 44.000 0.00 0.00 35.26 5.01
2778 4665 5.073554 ACCTCATCATTTATCCTACATGGCA 59.926 40.000 0.00 0.00 35.26 4.92
2779 4666 5.413833 CACCTCATCATTTATCCTACATGGC 59.586 44.000 0.00 0.00 35.26 4.40
2780 4667 5.942236 CCACCTCATCATTTATCCTACATGG 59.058 44.000 0.00 0.00 37.10 3.66
2781 4668 6.772605 TCCACCTCATCATTTATCCTACATG 58.227 40.000 0.00 0.00 0.00 3.21
2782 4669 6.013032 CCTCCACCTCATCATTTATCCTACAT 60.013 42.308 0.00 0.00 0.00 2.29
2783 4670 5.307976 CCTCCACCTCATCATTTATCCTACA 59.692 44.000 0.00 0.00 0.00 2.74
2784 4671 5.544176 TCCTCCACCTCATCATTTATCCTAC 59.456 44.000 0.00 0.00 0.00 3.18
2785 4672 5.726560 TCCTCCACCTCATCATTTATCCTA 58.273 41.667 0.00 0.00 0.00 2.94
2786 4673 4.570926 TCCTCCACCTCATCATTTATCCT 58.429 43.478 0.00 0.00 0.00 3.24
2787 4674 4.594920 TCTCCTCCACCTCATCATTTATCC 59.405 45.833 0.00 0.00 0.00 2.59
2788 4675 5.541868 TCTCTCCTCCACCTCATCATTTATC 59.458 44.000 0.00 0.00 0.00 1.75
2789 4676 5.471424 TCTCTCCTCCACCTCATCATTTAT 58.529 41.667 0.00 0.00 0.00 1.40
2790 4677 4.883759 TCTCTCCTCCACCTCATCATTTA 58.116 43.478 0.00 0.00 0.00 1.40
2791 4678 3.710677 CTCTCTCCTCCACCTCATCATTT 59.289 47.826 0.00 0.00 0.00 2.32
2792 4679 3.052262 TCTCTCTCCTCCACCTCATCATT 60.052 47.826 0.00 0.00 0.00 2.57
2793 4680 2.517553 TCTCTCTCCTCCACCTCATCAT 59.482 50.000 0.00 0.00 0.00 2.45
2794 4681 1.925959 TCTCTCTCCTCCACCTCATCA 59.074 52.381 0.00 0.00 0.00 3.07
2795 4682 2.693074 GTTCTCTCTCCTCCACCTCATC 59.307 54.545 0.00 0.00 0.00 2.92
2796 4683 2.314549 AGTTCTCTCTCCTCCACCTCAT 59.685 50.000 0.00 0.00 0.00 2.90
2797 4684 1.713647 AGTTCTCTCTCCTCCACCTCA 59.286 52.381 0.00 0.00 0.00 3.86
2798 4685 2.291282 TGAGTTCTCTCTCCTCCACCTC 60.291 54.545 1.53 0.00 40.98 3.85
2799 4686 1.713647 TGAGTTCTCTCTCCTCCACCT 59.286 52.381 1.53 0.00 40.98 4.00
2800 4687 2.223803 TGAGTTCTCTCTCCTCCACC 57.776 55.000 1.53 0.00 40.98 4.61
2801 4688 5.197451 TCTTATGAGTTCTCTCTCCTCCAC 58.803 45.833 1.53 0.00 40.98 4.02
2802 4689 5.458451 TCTTATGAGTTCTCTCTCCTCCA 57.542 43.478 1.53 0.00 40.98 3.86
2803 4690 6.783708 TTTCTTATGAGTTCTCTCTCCTCC 57.216 41.667 1.53 0.00 40.98 4.30
2847 4734 8.739039 CGAAGATATCATCTCTTGTCCTATCTT 58.261 37.037 5.32 0.00 39.08 2.40
2848 4735 7.148086 GCGAAGATATCATCTCTTGTCCTATCT 60.148 40.741 5.32 0.00 39.08 1.98
2849 4736 6.972328 GCGAAGATATCATCTCTTGTCCTATC 59.028 42.308 5.32 0.00 39.08 2.08
2850 4737 6.435591 TGCGAAGATATCATCTCTTGTCCTAT 59.564 38.462 5.32 0.00 39.08 2.57
2851 4738 5.770162 TGCGAAGATATCATCTCTTGTCCTA 59.230 40.000 5.32 0.00 39.08 2.94
2852 4739 4.586421 TGCGAAGATATCATCTCTTGTCCT 59.414 41.667 5.32 0.00 39.08 3.85
2853 4740 4.683781 GTGCGAAGATATCATCTCTTGTCC 59.316 45.833 5.32 0.00 39.08 4.02
2854 4741 5.284864 TGTGCGAAGATATCATCTCTTGTC 58.715 41.667 5.32 0.00 39.08 3.18
2855 4742 5.268118 TGTGCGAAGATATCATCTCTTGT 57.732 39.130 5.32 0.00 39.08 3.16
2856 4743 6.782298 ATTGTGCGAAGATATCATCTCTTG 57.218 37.500 5.32 0.00 39.08 3.02
2857 4744 8.093307 ACATATTGTGCGAAGATATCATCTCTT 58.907 33.333 5.32 0.00 39.08 2.85
2858 4745 7.544915 CACATATTGTGCGAAGATATCATCTCT 59.455 37.037 5.32 0.00 41.89 3.10
2859 4746 7.673651 CACATATTGTGCGAAGATATCATCTC 58.326 38.462 5.32 0.00 41.89 2.75
2860 4747 7.592439 CACATATTGTGCGAAGATATCATCT 57.408 36.000 5.32 0.00 41.89 2.90
2883 4770 3.547054 ACTCCTAAAAACGTGGTGACA 57.453 42.857 0.00 0.00 38.70 3.58
2884 4771 5.052481 AGTTACTCCTAAAAACGTGGTGAC 58.948 41.667 0.00 0.00 0.00 3.67
2885 4772 5.280654 AGTTACTCCTAAAAACGTGGTGA 57.719 39.130 0.00 0.00 0.00 4.02
2886 4773 6.218746 ACTAGTTACTCCTAAAAACGTGGTG 58.781 40.000 0.00 0.00 0.00 4.17
2887 4774 6.410942 ACTAGTTACTCCTAAAAACGTGGT 57.589 37.500 0.00 0.00 0.00 4.16
2888 4775 8.992835 ATAACTAGTTACTCCTAAAAACGTGG 57.007 34.615 17.45 0.00 0.00 4.94
2912 4799 8.502738 TGGGTCATTTCTTAGCCTTATCTTTAT 58.497 33.333 0.00 0.00 34.30 1.40
2913 4800 7.867921 TGGGTCATTTCTTAGCCTTATCTTTA 58.132 34.615 0.00 0.00 34.30 1.85
2914 4801 6.731467 TGGGTCATTTCTTAGCCTTATCTTT 58.269 36.000 0.00 0.00 34.30 2.52
2915 4802 6.327386 TGGGTCATTTCTTAGCCTTATCTT 57.673 37.500 0.00 0.00 34.30 2.40
2916 4803 5.975988 TGGGTCATTTCTTAGCCTTATCT 57.024 39.130 0.00 0.00 34.30 1.98
2917 4804 6.547510 ACAATGGGTCATTTCTTAGCCTTATC 59.452 38.462 0.00 0.00 31.05 1.75
2918 4805 6.435164 ACAATGGGTCATTTCTTAGCCTTAT 58.565 36.000 0.00 0.00 31.05 1.73
2919 4806 5.826643 ACAATGGGTCATTTCTTAGCCTTA 58.173 37.500 0.00 0.00 31.05 2.69
2920 4807 4.677182 ACAATGGGTCATTTCTTAGCCTT 58.323 39.130 0.00 0.00 31.05 4.35
2921 4808 4.322057 ACAATGGGTCATTTCTTAGCCT 57.678 40.909 0.00 0.00 31.05 4.58
2922 4809 5.297029 GTCTACAATGGGTCATTTCTTAGCC 59.703 44.000 0.00 0.00 31.05 3.93
2923 4810 5.880332 TGTCTACAATGGGTCATTTCTTAGC 59.120 40.000 0.00 0.00 31.05 3.09
2924 4811 8.511604 AATGTCTACAATGGGTCATTTCTTAG 57.488 34.615 0.00 0.00 31.05 2.18
2925 4812 8.877864 AAATGTCTACAATGGGTCATTTCTTA 57.122 30.769 7.41 0.00 32.48 2.10
2926 4813 7.781324 AAATGTCTACAATGGGTCATTTCTT 57.219 32.000 7.41 0.00 32.48 2.52
2927 4814 7.781324 AAAATGTCTACAATGGGTCATTTCT 57.219 32.000 11.23 4.04 35.43 2.52
2952 4839 9.844790 CTTGCATGTAATTAAGAGATGACAAAA 57.155 29.630 0.00 0.00 0.00 2.44
2953 4840 9.230122 TCTTGCATGTAATTAAGAGATGACAAA 57.770 29.630 0.00 0.00 0.00 2.83
2954 4841 8.668353 GTCTTGCATGTAATTAAGAGATGACAA 58.332 33.333 0.00 5.06 30.38 3.18
2955 4842 7.280876 GGTCTTGCATGTAATTAAGAGATGACA 59.719 37.037 0.00 0.00 30.38 3.58
2956 4843 7.497249 AGGTCTTGCATGTAATTAAGAGATGAC 59.503 37.037 0.00 0.00 30.38 3.06
2957 4844 7.568349 AGGTCTTGCATGTAATTAAGAGATGA 58.432 34.615 0.00 0.00 30.38 2.92
2958 4845 7.798596 AGGTCTTGCATGTAATTAAGAGATG 57.201 36.000 0.00 0.00 30.38 2.90
2959 4846 9.553064 CTTAGGTCTTGCATGTAATTAAGAGAT 57.447 33.333 0.00 0.00 30.38 2.75
2960 4847 8.758829 TCTTAGGTCTTGCATGTAATTAAGAGA 58.241 33.333 0.00 0.00 30.38 3.10
2961 4848 8.948631 TCTTAGGTCTTGCATGTAATTAAGAG 57.051 34.615 0.00 0.00 30.38 2.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.