Multiple sequence alignment - TraesCS2A01G577400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G577400 chr2A 100.000 3670 0 0 1 3670 771504211 771507880 0.000000e+00 6778.0
1 TraesCS2A01G577400 chr2A 99.359 312 1 1 1 311 737376954 737377265 6.880000e-157 564.0
2 TraesCS2A01G577400 chr2A 95.779 308 4 3 1 302 759468214 759468518 4.260000e-134 488.0
3 TraesCS2A01G577400 chr2A 86.992 123 15 1 2998 3119 516281878 516282000 1.780000e-28 137.0
4 TraesCS2A01G577400 chr2A 76.608 171 28 10 507 675 62117831 62117991 2.350000e-12 84.2
5 TraesCS2A01G577400 chr2A 90.196 51 4 1 484 534 488859168 488859217 8.510000e-07 65.8
6 TraesCS2A01G577400 chr2D 87.876 2029 149 47 827 2791 645759323 645757328 0.000000e+00 2294.0
7 TraesCS2A01G577400 chr2D 86.844 1353 127 30 467 1799 645821233 645822554 0.000000e+00 1465.0
8 TraesCS2A01G577400 chr2D 86.893 824 70 20 1995 2789 645822757 645823571 0.000000e+00 889.0
9 TraesCS2A01G577400 chr2D 89.474 551 45 10 3124 3670 645824279 645824820 0.000000e+00 684.0
10 TraesCS2A01G577400 chr2D 90.930 430 25 6 853 1280 645762018 645761601 1.910000e-157 566.0
11 TraesCS2A01G577400 chr2D 86.111 540 34 28 3142 3670 645744060 645743551 8.960000e-151 544.0
12 TraesCS2A01G577400 chr2D 93.269 312 20 1 3359 3670 645811652 645811342 3.340000e-125 459.0
13 TraesCS2A01G577400 chr2D 89.286 140 14 1 2791 2929 645757287 645757148 1.350000e-39 174.0
14 TraesCS2A01G577400 chr2D 88.806 134 12 2 2796 2927 645823619 645823751 1.050000e-35 161.0
15 TraesCS2A01G577400 chr2D 100.000 31 0 0 507 537 61764752 61764782 1.420000e-04 58.4
16 TraesCS2A01G577400 chr2B 88.190 1050 81 27 841 1869 789697542 789696515 0.000000e+00 1212.0
17 TraesCS2A01G577400 chr2B 88.982 953 69 14 1868 2791 789696441 789695496 0.000000e+00 1146.0
18 TraesCS2A01G577400 chr2B 90.200 551 48 4 3124 3670 789694609 789694061 0.000000e+00 713.0
19 TraesCS2A01G577400 chr2B 91.736 242 14 4 1075 1311 789779945 789779705 7.600000e-87 331.0
20 TraesCS2A01G577400 chr2B 85.321 327 39 5 2173 2493 789772603 789772280 2.730000e-86 329.0
21 TraesCS2A01G577400 chr2B 89.535 258 23 2 853 1110 789698113 789697860 1.270000e-84 324.0
22 TraesCS2A01G577400 chr2B 87.037 270 23 10 1497 1761 789777319 789777057 9.970000e-76 294.0
23 TraesCS2A01G577400 chr2B 92.593 189 12 2 1315 1503 789777536 789777350 1.680000e-68 270.0
24 TraesCS2A01G577400 chr2B 84.739 249 30 6 70 312 442580733 442580487 3.660000e-60 243.0
25 TraesCS2A01G577400 chr2B 87.500 176 14 6 2623 2791 765324996 765324822 2.890000e-46 196.0
26 TraesCS2A01G577400 chr2B 85.600 125 13 3 853 972 789785772 789785648 3.850000e-25 126.0
27 TraesCS2A01G577400 chr6D 90.657 289 22 4 28 311 2622419 2622707 2.670000e-101 379.0
28 TraesCS2A01G577400 chr6D 86.047 129 15 3 2997 3124 463680954 463680828 6.390000e-28 135.0
29 TraesCS2A01G577400 chr5B 82.609 322 44 11 1 315 658780872 658780556 1.300000e-69 274.0
30 TraesCS2A01G577400 chr5B 87.500 176 15 3 2623 2791 58981620 58981445 2.890000e-46 196.0
31 TraesCS2A01G577400 chr5B 87.500 176 15 3 2623 2791 340042462 340042287 2.890000e-46 196.0
32 TraesCS2A01G577400 chr6A 89.881 168 14 2 1 167 48198442 48198277 2.870000e-51 213.0
33 TraesCS2A01G577400 chr7B 88.068 176 14 3 2623 2791 64012561 64012736 6.210000e-48 202.0
34 TraesCS2A01G577400 chr7B 88.068 176 14 3 2623 2791 600817586 600817411 6.210000e-48 202.0
35 TraesCS2A01G577400 chr6B 87.500 176 15 3 2623 2791 100666745 100666920 2.890000e-46 196.0
36 TraesCS2A01G577400 chr6B 93.103 58 4 0 487 544 93841012 93840955 6.530000e-13 86.1
37 TraesCS2A01G577400 chr5D 89.286 112 12 0 3008 3119 547545550 547545661 1.370000e-29 141.0
38 TraesCS2A01G577400 chr4B 87.395 119 15 0 3002 3120 299565268 299565386 1.780000e-28 137.0
39 TraesCS2A01G577400 chr3B 87.500 120 13 2 3001 3119 543766657 543766775 1.780000e-28 137.0
40 TraesCS2A01G577400 chr3B 86.400 125 15 2 2996 3120 325870990 325871112 6.390000e-28 135.0
41 TraesCS2A01G577400 chr3B 86.667 120 15 1 2998 3116 649645636 649645755 8.270000e-27 132.0
42 TraesCS2A01G577400 chr7D 87.288 118 15 0 3002 3119 555049530 555049413 6.390000e-28 135.0
43 TraesCS2A01G577400 chr7D 89.247 93 8 2 64 156 452444281 452444371 8.330000e-22 115.0
44 TraesCS2A01G577400 chr3A 86.400 125 15 2 2996 3120 291825328 291825450 6.390000e-28 135.0
45 TraesCS2A01G577400 chr1B 94.937 79 3 1 11 88 667382449 667382371 4.980000e-24 122.0
46 TraesCS2A01G577400 chr7A 91.011 89 8 0 79 167 719583372 719583460 1.790000e-23 121.0
47 TraesCS2A01G577400 chr4A 89.474 57 6 0 478 534 67331920 67331976 5.080000e-09 73.1
48 TraesCS2A01G577400 chr5A 91.837 49 4 0 484 532 502977683 502977635 6.580000e-08 69.4
49 TraesCS2A01G577400 chr5A 86.207 58 8 0 480 537 495048486 495048429 3.060000e-06 63.9
50 TraesCS2A01G577400 chr1A 90.244 41 3 1 475 514 339180513 339180553 7.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G577400 chr2A 771504211 771507880 3669 False 6778.000000 6778 100.000000 1 3670 1 chr2A.!!$F6 3669
1 TraesCS2A01G577400 chr2D 645757148 645762018 4870 True 1011.333333 2294 89.364000 827 2929 3 chr2D.!!$R3 2102
2 TraesCS2A01G577400 chr2D 645821233 645824820 3587 False 799.750000 1465 88.004250 467 3670 4 chr2D.!!$F2 3203
3 TraesCS2A01G577400 chr2D 645743551 645744060 509 True 544.000000 544 86.111000 3142 3670 1 chr2D.!!$R1 528
4 TraesCS2A01G577400 chr2B 789694061 789698113 4052 True 848.750000 1212 89.226750 841 3670 4 chr2B.!!$R5 2829
5 TraesCS2A01G577400 chr2B 789777057 789779945 2888 True 298.333333 331 90.455333 1075 1761 3 chr2B.!!$R6 686

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
295 296 0.173481 GCCCGCCCTCAATTTTCTTC 59.827 55.0 0.0 0.0 0.00 2.87 F
325 326 0.311790 CACTGCGTGGAAGCACATTT 59.688 50.0 1.4 0.0 42.92 2.32 F
1294 3167 0.038744 CCCTTGATTGCCACAGTCCT 59.961 55.0 0.0 0.0 0.00 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1260 3133 0.121402 AAGGGAGGGAGCTTAGGGTT 59.879 55.0 0.00 0.00 0.0 4.11 R
2186 6397 0.243365 TTTGTGCGATTCATGTGGCC 59.757 50.0 0.00 0.00 0.0 5.36 R
3148 7981 0.244721 GAACTGGGTGGCATGCTTTC 59.755 55.0 18.92 8.11 0.0 2.62 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
53 54 8.446599 AATTACAGTAAATACTATGTGTGCCC 57.553 34.615 0.00 0.00 34.13 5.36
55 56 5.428253 ACAGTAAATACTATGTGTGCCCAG 58.572 41.667 0.00 0.00 34.13 4.45
56 57 5.045869 ACAGTAAATACTATGTGTGCCCAGT 60.046 40.000 0.00 0.00 34.13 4.00
58 59 6.701841 CAGTAAATACTATGTGTGCCCAGTAG 59.298 42.308 0.00 0.00 34.13 2.57
59 60 5.693769 AAATACTATGTGTGCCCAGTAGT 57.306 39.130 1.01 1.01 31.64 2.73
60 61 6.801718 AAATACTATGTGTGCCCAGTAGTA 57.198 37.500 4.59 4.59 33.48 1.82
61 62 6.996180 AATACTATGTGTGCCCAGTAGTAT 57.004 37.500 7.80 7.80 37.56 2.12
63 64 4.547671 ACTATGTGTGCCCAGTAGTATCT 58.452 43.478 0.00 0.00 0.00 1.98
64 65 3.827008 ATGTGTGCCCAGTAGTATCTG 57.173 47.619 0.00 0.00 35.45 2.90
77 78 6.520272 CAGTAGTATCTGGGAAATTCTGAGG 58.480 44.000 0.00 0.00 0.00 3.86
78 79 6.098982 CAGTAGTATCTGGGAAATTCTGAGGT 59.901 42.308 0.00 0.00 0.00 3.85
83 84 8.560903 AGTATCTGGGAAATTCTGAGGTAATTT 58.439 33.333 0.00 0.00 38.82 1.82
84 85 7.651027 ATCTGGGAAATTCTGAGGTAATTTG 57.349 36.000 0.00 0.00 36.82 2.32
85 86 5.951747 TCTGGGAAATTCTGAGGTAATTTGG 59.048 40.000 0.00 0.00 36.82 3.28
86 87 5.022787 TGGGAAATTCTGAGGTAATTTGGG 58.977 41.667 0.00 0.00 36.82 4.12
89 90 6.398095 GGAAATTCTGAGGTAATTTGGGTTG 58.602 40.000 0.00 0.00 36.82 3.77
90 91 5.405935 AATTCTGAGGTAATTTGGGTTGC 57.594 39.130 0.00 0.00 0.00 4.17
91 92 3.517296 TCTGAGGTAATTTGGGTTGCA 57.483 42.857 0.00 0.00 0.00 4.08
93 94 3.826157 TCTGAGGTAATTTGGGTTGCAAG 59.174 43.478 0.00 0.00 0.00 4.01
94 95 3.826157 CTGAGGTAATTTGGGTTGCAAGA 59.174 43.478 0.00 0.00 0.00 3.02
95 96 4.415596 TGAGGTAATTTGGGTTGCAAGAT 58.584 39.130 0.00 0.00 0.00 2.40
97 98 5.306678 TGAGGTAATTTGGGTTGCAAGATTT 59.693 36.000 0.00 0.00 0.00 2.17
98 99 6.183361 TGAGGTAATTTGGGTTGCAAGATTTT 60.183 34.615 0.00 0.00 0.00 1.82
101 102 6.147656 GGTAATTTGGGTTGCAAGATTTTGAG 59.852 38.462 0.00 0.00 36.36 3.02
102 103 5.549742 ATTTGGGTTGCAAGATTTTGAGA 57.450 34.783 0.00 0.00 36.36 3.27
104 105 6.662865 TTTGGGTTGCAAGATTTTGAGATA 57.337 33.333 0.00 0.00 36.36 1.98
107 108 6.632909 TGGGTTGCAAGATTTTGAGATATTG 58.367 36.000 0.00 0.00 36.36 1.90
108 109 6.044682 GGGTTGCAAGATTTTGAGATATTGG 58.955 40.000 0.00 0.00 36.36 3.16
109 110 5.521372 GGTTGCAAGATTTTGAGATATTGGC 59.479 40.000 0.00 0.00 36.36 4.52
111 112 7.416664 GGTTGCAAGATTTTGAGATATTGGCTA 60.417 37.037 0.00 0.00 36.36 3.93
112 113 7.828508 TGCAAGATTTTGAGATATTGGCTAT 57.171 32.000 0.00 0.00 36.36 2.97
114 115 8.698210 TGCAAGATTTTGAGATATTGGCTATTT 58.302 29.630 0.00 0.00 36.36 1.40
117 118 9.538508 AAGATTTTGAGATATTGGCTATTTTGC 57.461 29.630 0.00 0.00 0.00 3.68
118 119 8.921205 AGATTTTGAGATATTGGCTATTTTGCT 58.079 29.630 0.00 0.00 0.00 3.91
122 123 9.801873 TTTGAGATATTGGCTATTTTGCTAAAC 57.198 29.630 0.00 0.00 37.01 2.01
123 124 8.518430 TGAGATATTGGCTATTTTGCTAAACA 57.482 30.769 0.00 0.00 37.01 2.83
124 125 9.135189 TGAGATATTGGCTATTTTGCTAAACAT 57.865 29.630 0.00 0.00 37.01 2.71
129 130 6.842437 TGGCTATTTTGCTAAACATAACCA 57.158 33.333 0.00 0.00 0.00 3.67
130 131 7.233389 TGGCTATTTTGCTAAACATAACCAA 57.767 32.000 0.00 0.00 0.00 3.67
132 133 8.317679 TGGCTATTTTGCTAAACATAACCAATT 58.682 29.630 0.00 0.00 0.00 2.32
133 134 9.161629 GGCTATTTTGCTAAACATAACCAATTT 57.838 29.630 0.00 0.00 0.00 1.82
186 187 8.798859 AATCTGAAACAATTCTAGTGCATAGT 57.201 30.769 0.00 0.00 36.48 2.12
187 188 9.890629 AATCTGAAACAATTCTAGTGCATAGTA 57.109 29.630 0.00 0.00 36.48 1.82
188 189 8.703604 TCTGAAACAATTCTAGTGCATAGTAC 57.296 34.615 0.00 0.00 36.48 2.73
189 190 8.311109 TCTGAAACAATTCTAGTGCATAGTACA 58.689 33.333 0.00 0.00 36.48 2.90
190 191 9.102757 CTGAAACAATTCTAGTGCATAGTACAT 57.897 33.333 0.00 0.00 36.48 2.29
191 192 8.882736 TGAAACAATTCTAGTGCATAGTACATG 58.117 33.333 0.00 0.00 36.48 3.21
192 193 8.792830 AAACAATTCTAGTGCATAGTACATGT 57.207 30.769 2.69 2.69 32.85 3.21
193 194 8.792830 AACAATTCTAGTGCATAGTACATGTT 57.207 30.769 2.30 0.00 32.85 2.71
194 195 8.792830 ACAATTCTAGTGCATAGTACATGTTT 57.207 30.769 2.30 0.00 32.85 2.83
195 196 9.231297 ACAATTCTAGTGCATAGTACATGTTTT 57.769 29.630 2.30 0.00 32.85 2.43
196 197 9.708222 CAATTCTAGTGCATAGTACATGTTTTC 57.292 33.333 2.30 0.00 32.85 2.29
197 198 9.448438 AATTCTAGTGCATAGTACATGTTTTCA 57.552 29.630 2.30 0.00 32.85 2.69
198 199 8.479313 TTCTAGTGCATAGTACATGTTTTCAG 57.521 34.615 2.30 0.00 32.85 3.02
199 200 7.611770 TCTAGTGCATAGTACATGTTTTCAGT 58.388 34.615 2.30 0.27 32.85 3.41
200 201 8.745590 TCTAGTGCATAGTACATGTTTTCAGTA 58.254 33.333 2.30 0.00 32.85 2.74
202 203 7.386851 AGTGCATAGTACATGTTTTCAGTAGT 58.613 34.615 2.30 0.00 0.00 2.73
203 204 8.528643 AGTGCATAGTACATGTTTTCAGTAGTA 58.471 33.333 2.30 0.00 31.20 1.82
204 205 9.314321 GTGCATAGTACATGTTTTCAGTAGTAT 57.686 33.333 2.30 0.00 34.44 2.12
205 206 9.884636 TGCATAGTACATGTTTTCAGTAGTATT 57.115 29.630 2.30 0.00 33.35 1.89
210 211 9.804758 AGTACATGTTTTCAGTAGTATTCTAGC 57.195 33.333 2.30 0.00 0.00 3.42
211 212 9.582431 GTACATGTTTTCAGTAGTATTCTAGCA 57.418 33.333 2.30 0.00 0.00 3.49
213 214 9.502091 ACATGTTTTCAGTAGTATTCTAGCAAA 57.498 29.630 0.00 0.00 0.00 3.68
222 223 9.167311 CAGTAGTATTCTAGCAAATTTTGACCT 57.833 33.333 13.26 4.21 0.00 3.85
223 224 9.740710 AGTAGTATTCTAGCAAATTTTGACCTT 57.259 29.630 13.26 0.00 0.00 3.50
225 226 8.870075 AGTATTCTAGCAAATTTTGACCTTCT 57.130 30.769 13.26 2.86 0.00 2.85
226 227 9.301897 AGTATTCTAGCAAATTTTGACCTTCTT 57.698 29.630 13.26 0.00 0.00 2.52
227 228 9.914131 GTATTCTAGCAAATTTTGACCTTCTTT 57.086 29.630 13.26 0.00 0.00 2.52
228 229 8.822652 ATTCTAGCAAATTTTGACCTTCTTTG 57.177 30.769 13.26 0.00 0.00 2.77
229 230 7.581213 TCTAGCAAATTTTGACCTTCTTTGA 57.419 32.000 13.26 0.88 0.00 2.69
231 232 8.474025 TCTAGCAAATTTTGACCTTCTTTGAAA 58.526 29.630 13.26 0.00 0.00 2.69
232 233 7.920160 AGCAAATTTTGACCTTCTTTGAAAA 57.080 28.000 13.26 0.00 0.00 2.29
233 234 8.334263 AGCAAATTTTGACCTTCTTTGAAAAA 57.666 26.923 13.26 0.00 0.00 1.94
278 279 1.873698 TCACACCGTTACTTTGAGCC 58.126 50.000 0.00 0.00 0.00 4.70
279 280 0.872388 CACACCGTTACTTTGAGCCC 59.128 55.000 0.00 0.00 0.00 5.19
281 282 1.670083 ACCGTTACTTTGAGCCCGC 60.670 57.895 0.00 0.00 0.00 6.13
282 283 2.396157 CCGTTACTTTGAGCCCGCC 61.396 63.158 0.00 0.00 0.00 6.13
283 284 2.396157 CGTTACTTTGAGCCCGCCC 61.396 63.158 0.00 0.00 0.00 6.13
284 285 1.002502 GTTACTTTGAGCCCGCCCT 60.003 57.895 0.00 0.00 0.00 5.19
285 286 1.025113 GTTACTTTGAGCCCGCCCTC 61.025 60.000 0.00 0.00 0.00 4.30
286 287 1.485294 TTACTTTGAGCCCGCCCTCA 61.485 55.000 0.00 0.00 39.94 3.86
287 288 1.485294 TACTTTGAGCCCGCCCTCAA 61.485 55.000 10.70 10.70 46.85 3.02
289 290 2.763215 TTGAGCCCGCCCTCAATT 59.237 55.556 10.70 0.00 44.49 2.32
290 291 1.076549 TTGAGCCCGCCCTCAATTT 59.923 52.632 10.70 0.00 44.49 1.82
291 292 0.541764 TTGAGCCCGCCCTCAATTTT 60.542 50.000 10.70 0.00 44.49 1.82
292 293 0.965363 TGAGCCCGCCCTCAATTTTC 60.965 55.000 1.33 0.00 38.81 2.29
293 294 0.681243 GAGCCCGCCCTCAATTTTCT 60.681 55.000 0.00 0.00 0.00 2.52
295 296 0.173481 GCCCGCCCTCAATTTTCTTC 59.827 55.000 0.00 0.00 0.00 2.87
296 297 0.817654 CCCGCCCTCAATTTTCTTCC 59.182 55.000 0.00 0.00 0.00 3.46
297 298 1.544724 CCGCCCTCAATTTTCTTCCA 58.455 50.000 0.00 0.00 0.00 3.53
298 299 1.892474 CCGCCCTCAATTTTCTTCCAA 59.108 47.619 0.00 0.00 0.00 3.53
300 301 2.819608 CGCCCTCAATTTTCTTCCAAGA 59.180 45.455 0.00 0.00 0.00 3.02
301 302 3.445096 CGCCCTCAATTTTCTTCCAAGAT 59.555 43.478 0.00 0.00 34.49 2.40
302 303 4.082026 CGCCCTCAATTTTCTTCCAAGATT 60.082 41.667 0.00 0.00 34.49 2.40
303 304 5.414360 GCCCTCAATTTTCTTCCAAGATTC 58.586 41.667 0.00 0.00 34.49 2.52
304 305 5.644644 CCCTCAATTTTCTTCCAAGATTCG 58.355 41.667 0.00 0.00 34.49 3.34
306 307 5.059404 TCAATTTTCTTCCAAGATTCGCC 57.941 39.130 0.00 0.00 34.49 5.54
307 308 4.522405 TCAATTTTCTTCCAAGATTCGCCA 59.478 37.500 0.00 0.00 34.49 5.69
309 310 2.859165 TTCTTCCAAGATTCGCCACT 57.141 45.000 0.00 0.00 34.49 4.00
310 311 2.099141 TCTTCCAAGATTCGCCACTG 57.901 50.000 0.00 0.00 0.00 3.66
311 312 0.449388 CTTCCAAGATTCGCCACTGC 59.551 55.000 0.00 0.00 0.00 4.40
324 325 1.951510 CACTGCGTGGAAGCACATT 59.048 52.632 1.40 0.00 42.92 2.71
325 326 0.311790 CACTGCGTGGAAGCACATTT 59.688 50.000 1.40 0.00 42.92 2.32
326 327 1.032014 ACTGCGTGGAAGCACATTTT 58.968 45.000 0.00 0.00 42.92 1.82
327 328 1.408702 ACTGCGTGGAAGCACATTTTT 59.591 42.857 0.00 0.00 42.92 1.94
346 347 3.810310 TTTTTCCCGTTTCAATGTGCT 57.190 38.095 0.00 0.00 0.00 4.40
347 348 3.810310 TTTTCCCGTTTCAATGTGCTT 57.190 38.095 0.00 0.00 0.00 3.91
348 349 3.363341 TTTCCCGTTTCAATGTGCTTC 57.637 42.857 0.00 0.00 0.00 3.86
349 350 2.270352 TCCCGTTTCAATGTGCTTCT 57.730 45.000 0.00 0.00 0.00 2.85
350 351 2.151202 TCCCGTTTCAATGTGCTTCTC 58.849 47.619 0.00 0.00 0.00 2.87
352 353 1.531149 CCGTTTCAATGTGCTTCTCGT 59.469 47.619 0.00 0.00 0.00 4.18
353 354 2.563976 CGTTTCAATGTGCTTCTCGTG 58.436 47.619 0.00 0.00 0.00 4.35
355 356 3.303066 CGTTTCAATGTGCTTCTCGTGAA 60.303 43.478 0.00 0.00 0.00 3.18
356 357 4.597079 GTTTCAATGTGCTTCTCGTGAAA 58.403 39.130 1.12 0.00 0.00 2.69
357 358 4.472691 TTCAATGTGCTTCTCGTGAAAG 57.527 40.909 1.12 0.00 0.00 2.62
358 359 2.807967 TCAATGTGCTTCTCGTGAAAGG 59.192 45.455 1.12 0.00 0.00 3.11
361 362 2.912771 TGTGCTTCTCGTGAAAGGAAA 58.087 42.857 1.12 0.00 0.00 3.13
362 363 3.476552 TGTGCTTCTCGTGAAAGGAAAT 58.523 40.909 1.12 0.00 0.00 2.17
363 364 3.250762 TGTGCTTCTCGTGAAAGGAAATG 59.749 43.478 1.12 0.00 0.00 2.32
368 369 3.942829 TCTCGTGAAAGGAAATGCATCT 58.057 40.909 0.00 0.00 0.00 2.90
369 370 3.935203 TCTCGTGAAAGGAAATGCATCTC 59.065 43.478 0.00 0.00 0.00 2.75
370 371 3.673902 TCGTGAAAGGAAATGCATCTCA 58.326 40.909 0.00 0.00 0.00 3.27
371 372 4.264253 TCGTGAAAGGAAATGCATCTCAT 58.736 39.130 0.00 0.00 36.87 2.90
372 373 4.095334 TCGTGAAAGGAAATGCATCTCATG 59.905 41.667 0.00 2.68 35.13 3.07
373 374 4.679662 GTGAAAGGAAATGCATCTCATGG 58.320 43.478 0.00 0.00 35.13 3.66
374 375 4.400251 GTGAAAGGAAATGCATCTCATGGA 59.600 41.667 0.00 0.00 35.13 3.41
375 376 5.018149 TGAAAGGAAATGCATCTCATGGAA 58.982 37.500 0.00 0.00 35.13 3.53
376 377 5.126545 TGAAAGGAAATGCATCTCATGGAAG 59.873 40.000 0.00 0.00 35.13 3.46
377 378 2.957006 AGGAAATGCATCTCATGGAAGC 59.043 45.455 0.00 0.00 38.91 3.86
380 381 3.961582 TGCATCTCATGGAAGCACA 57.038 47.368 9.18 0.00 42.63 4.57
382 383 2.730382 TGCATCTCATGGAAGCACATT 58.270 42.857 9.18 0.00 42.63 2.71
383 384 3.093814 TGCATCTCATGGAAGCACATTT 58.906 40.909 9.18 0.00 42.63 2.32
385 386 4.020928 TGCATCTCATGGAAGCACATTTTT 60.021 37.500 9.18 0.00 42.63 1.94
418 419 3.609103 CGTAAGCAAATATGTGCCTCC 57.391 47.619 14.50 1.56 46.14 4.30
419 420 2.942376 CGTAAGCAAATATGTGCCTCCA 59.058 45.455 14.50 0.00 46.14 3.86
421 422 1.382522 AGCAAATATGTGCCTCCACG 58.617 50.000 14.50 0.00 46.14 4.94
422 423 1.065491 AGCAAATATGTGCCTCCACGA 60.065 47.619 14.50 0.00 46.14 4.35
425 426 3.366883 GCAAATATGTGCCTCCACGAAAA 60.367 43.478 6.61 0.00 45.04 2.29
426 427 4.414852 CAAATATGTGCCTCCACGAAAAG 58.585 43.478 0.00 0.00 45.04 2.27
427 428 2.851263 TATGTGCCTCCACGAAAAGT 57.149 45.000 0.00 0.00 45.04 2.66
428 429 2.851263 ATGTGCCTCCACGAAAAGTA 57.149 45.000 0.00 0.00 45.04 2.24
429 430 2.623878 TGTGCCTCCACGAAAAGTAA 57.376 45.000 0.00 0.00 45.04 2.24
430 431 2.489971 TGTGCCTCCACGAAAAGTAAG 58.510 47.619 0.00 0.00 45.04 2.34
433 434 2.367567 TGCCTCCACGAAAAGTAAGTCT 59.632 45.455 0.00 0.00 0.00 3.24
434 435 3.181458 TGCCTCCACGAAAAGTAAGTCTT 60.181 43.478 0.00 0.00 38.10 3.01
435 436 3.813724 GCCTCCACGAAAAGTAAGTCTTT 59.186 43.478 0.00 0.00 46.86 2.52
436 437 4.319549 GCCTCCACGAAAAGTAAGTCTTTG 60.320 45.833 0.00 0.00 44.50 2.77
437 438 4.814771 CCTCCACGAAAAGTAAGTCTTTGT 59.185 41.667 0.00 0.00 44.50 2.83
438 439 5.296035 CCTCCACGAAAAGTAAGTCTTTGTT 59.704 40.000 0.00 0.00 44.50 2.83
439 440 6.183360 CCTCCACGAAAAGTAAGTCTTTGTTT 60.183 38.462 0.00 0.00 44.50 2.83
440 441 6.778108 TCCACGAAAAGTAAGTCTTTGTTTC 58.222 36.000 0.00 0.00 44.50 2.78
441 442 6.596497 TCCACGAAAAGTAAGTCTTTGTTTCT 59.404 34.615 0.00 0.00 44.50 2.52
443 444 7.413657 CCACGAAAAGTAAGTCTTTGTTTCTCA 60.414 37.037 0.00 0.00 44.50 3.27
444 445 7.636359 CACGAAAAGTAAGTCTTTGTTTCTCAG 59.364 37.037 0.00 0.00 44.50 3.35
447 448 9.099454 GAAAAGTAAGTCTTTGTTTCTCAGAGA 57.901 33.333 0.00 0.00 44.50 3.10
448 449 9.449719 AAAAGTAAGTCTTTGTTTCTCAGAGAA 57.550 29.630 8.95 8.95 44.50 2.87
449 450 9.620259 AAAGTAAGTCTTTGTTTCTCAGAGAAT 57.380 29.630 13.86 0.00 43.72 2.40
450 451 8.825667 AGTAAGTCTTTGTTTCTCAGAGAATC 57.174 34.615 13.86 13.19 38.67 2.52
451 452 8.424918 AGTAAGTCTTTGTTTCTCAGAGAATCA 58.575 33.333 16.87 16.87 38.67 2.57
452 453 9.046296 GTAAGTCTTTGTTTCTCAGAGAATCAA 57.954 33.333 24.12 24.12 40.29 2.57
453 454 8.511604 AAGTCTTTGTTTCTCAGAGAATCAAA 57.488 30.769 30.47 30.47 44.79 2.69
454 455 8.688747 AGTCTTTGTTTCTCAGAGAATCAAAT 57.311 30.769 31.62 22.03 45.32 2.32
456 457 8.782144 GTCTTTGTTTCTCAGAGAATCAAATCT 58.218 33.333 31.62 0.00 45.32 2.40
461 462 9.650539 TGTTTCTCAGAGAATCAAATCTAGAAG 57.349 33.333 18.05 0.00 37.82 2.85
462 463 9.868277 GTTTCTCAGAGAATCAAATCTAGAAGA 57.132 33.333 13.86 0.00 37.82 2.87
465 466 9.253832 TCTCAGAGAATCAAATCTAGAAGAACT 57.746 33.333 0.00 0.59 37.82 3.01
466 467 9.874205 CTCAGAGAATCAAATCTAGAAGAACTT 57.126 33.333 0.00 0.00 37.82 2.66
498 499 4.022464 TCGCGAAAACAAATTTGTGTCT 57.978 36.364 23.93 11.57 41.31 3.41
509 510 5.730568 ACAAATTTGTGTCTTCACGAGAAGC 60.731 40.000 22.71 12.36 44.14 3.86
529 530 2.287547 GCAAATCTGTGCTTTTCGTGGA 60.288 45.455 0.00 0.00 41.51 4.02
539 540 3.123050 GCTTTTCGTGGAAGCACAATTT 58.877 40.909 12.76 0.00 46.67 1.82
606 609 5.239963 CCTAAGAAAAACTGGGCGAAAACTA 59.760 40.000 0.00 0.00 0.00 2.24
613 616 2.363038 ACTGGGCGAAAACTAAAAACCC 59.637 45.455 0.00 0.00 36.36 4.11
615 618 2.764572 TGGGCGAAAACTAAAAACCCAA 59.235 40.909 0.00 0.00 42.78 4.12
616 619 3.181474 TGGGCGAAAACTAAAAACCCAAG 60.181 43.478 0.00 0.00 42.78 3.61
621 624 6.455913 GGCGAAAACTAAAAACCCAAGAAAAC 60.456 38.462 0.00 0.00 0.00 2.43
622 625 6.455913 GCGAAAACTAAAAACCCAAGAAAACC 60.456 38.462 0.00 0.00 0.00 3.27
623 626 6.036300 CGAAAACTAAAAACCCAAGAAAACCC 59.964 38.462 0.00 0.00 0.00 4.11
625 628 6.569127 AACTAAAAACCCAAGAAAACCCAT 57.431 33.333 0.00 0.00 0.00 4.00
635 641 3.512219 AGAAAACCCATGTAAACCCGA 57.488 42.857 0.00 0.00 0.00 5.14
639 645 5.305902 AGAAAACCCATGTAAACCCGAAAAT 59.694 36.000 0.00 0.00 0.00 1.82
645 651 6.890814 ACCCATGTAAACCCGAAAATATGTAA 59.109 34.615 0.00 0.00 0.00 2.41
699 705 2.037902 ACCCAACACGTGATATGTGACA 59.962 45.455 25.01 0.00 37.29 3.58
701 707 3.325870 CCAACACGTGATATGTGACAGT 58.674 45.455 25.01 0.00 37.29 3.55
764 773 1.496429 CCTGCTGGGATAACCTCCATT 59.504 52.381 0.71 0.00 46.98 3.16
766 775 3.628257 CCTGCTGGGATAACCTCCATTTT 60.628 47.826 0.71 0.00 46.98 1.82
768 777 3.011144 TGCTGGGATAACCTCCATTTTCA 59.989 43.478 0.00 0.00 46.98 2.69
770 779 4.651045 GCTGGGATAACCTCCATTTTCATT 59.349 41.667 0.00 0.00 46.98 2.57
781 790 7.896811 ACCTCCATTTTCATTTTAGTTTCTCC 58.103 34.615 0.00 0.00 0.00 3.71
782 791 7.029563 CCTCCATTTTCATTTTAGTTTCTCCG 58.970 38.462 0.00 0.00 0.00 4.63
783 792 7.094377 CCTCCATTTTCATTTTAGTTTCTCCGA 60.094 37.037 0.00 0.00 0.00 4.55
785 794 9.456147 TCCATTTTCATTTTAGTTTCTCCGATA 57.544 29.630 0.00 0.00 0.00 2.92
823 832 5.932619 TTTTGAGATCCTCCGATAGAACA 57.067 39.130 0.00 0.00 39.76 3.18
824 833 5.521906 TTTGAGATCCTCCGATAGAACAG 57.478 43.478 0.00 0.00 39.76 3.16
826 835 4.537751 TGAGATCCTCCGATAGAACAGTT 58.462 43.478 0.00 0.00 39.76 3.16
827 836 5.691896 TGAGATCCTCCGATAGAACAGTTA 58.308 41.667 0.00 0.00 39.76 2.24
830 839 2.957006 TCCTCCGATAGAACAGTTAGGC 59.043 50.000 0.00 0.00 39.76 3.93
833 842 1.202371 CCGATAGAACAGTTAGGCGCA 60.202 52.381 10.83 0.00 39.76 6.09
834 843 2.120232 CGATAGAACAGTTAGGCGCAG 58.880 52.381 10.83 0.00 39.76 5.18
875 2746 6.460123 CGATGGGCTTTTGCTAATAGTTTGAT 60.460 38.462 0.00 0.00 46.54 2.57
920 2793 3.393941 CCTCTGAGATAATGGGGCTCTTT 59.606 47.826 6.17 0.00 0.00 2.52
979 2852 2.427232 TTTCTGTCTCGGTTGGTACG 57.573 50.000 0.00 0.00 0.00 3.67
1294 3167 0.038744 CCCTTGATTGCCACAGTCCT 59.961 55.000 0.00 0.00 0.00 3.85
1305 3181 2.547218 GCCACAGTCCTTCGTCTTGTAA 60.547 50.000 0.00 0.00 0.00 2.41
1313 3189 4.863131 GTCCTTCGTCTTGTAACAATCGAT 59.137 41.667 0.00 0.00 0.00 3.59
1485 5535 4.295141 ACAGTATTCCCCAATTGTTCGA 57.705 40.909 4.43 0.00 0.00 3.71
1486 5536 4.007659 ACAGTATTCCCCAATTGTTCGAC 58.992 43.478 4.43 0.00 0.00 4.20
1624 5713 0.980423 GGACTTGAAGCCTGAGGTCT 59.020 55.000 0.00 0.00 0.00 3.85
1667 5761 7.918562 TGTTGAACTATTTGTTTAGTGCTTTCC 59.081 33.333 0.00 0.00 39.30 3.13
1678 5772 3.857157 AGTGCTTTCCAACTAGGTTGA 57.143 42.857 11.38 0.00 45.28 3.18
1684 5778 4.793028 GCTTTCCAACTAGGTTGAAACTGC 60.793 45.833 11.38 3.39 45.28 4.40
1733 5827 3.499338 TGGATTGTTGCAGAACATCCTT 58.501 40.909 14.12 0.00 41.77 3.36
1745 5839 3.517500 AGAACATCCTTCTCTCTTGTCCC 59.482 47.826 0.00 0.00 0.00 4.46
1803 5912 3.200825 CCTGTCCAGGTATGTTCTTGGAT 59.799 47.826 5.11 0.00 43.53 3.41
1813 5922 9.293404 CAGGTATGTTCTTGGATTGATGATAAT 57.707 33.333 0.00 0.00 0.00 1.28
1843 5952 9.772973 TTGTTTTAGTCATGTATGAGTAGTTGT 57.227 29.630 8.85 0.00 42.02 3.32
1850 5959 9.640963 AGTCATGTATGAGTAGTTGTAGAAAAC 57.359 33.333 0.44 0.00 38.62 2.43
1851 5960 8.584600 GTCATGTATGAGTAGTTGTAGAAAACG 58.415 37.037 0.00 0.00 37.51 3.60
1869 5978 4.900635 AACGAAAATATGCCACTCATCC 57.099 40.909 0.00 0.00 36.63 3.51
1871 5980 4.526970 ACGAAAATATGCCACTCATCCTT 58.473 39.130 0.00 0.00 36.63 3.36
1872 5981 4.576463 ACGAAAATATGCCACTCATCCTTC 59.424 41.667 0.00 0.00 36.63 3.46
1873 5982 4.576053 CGAAAATATGCCACTCATCCTTCA 59.424 41.667 0.00 0.00 36.63 3.02
1874 5983 5.504665 CGAAAATATGCCACTCATCCTTCAC 60.505 44.000 0.00 0.00 36.63 3.18
1888 6074 5.423290 TCATCCTTCACTCAGCTGAGAAATA 59.577 40.000 42.76 26.06 44.74 1.40
1889 6075 5.336150 TCCTTCACTCAGCTGAGAAATAG 57.664 43.478 42.76 30.42 44.74 1.73
1984 6173 4.835284 TGATGCTAAACATGGTGGAGTA 57.165 40.909 0.00 0.00 39.84 2.59
2012 6202 2.534757 GCGTGATAAGTAAGGCTCGTTC 59.465 50.000 0.00 0.00 0.00 3.95
2034 6227 3.691498 GTTAGGCGATCGAATTTTTGGG 58.309 45.455 21.57 0.00 0.00 4.12
2070 6263 4.501559 CAGTCACATTTGTTGCTCTGTTTG 59.498 41.667 0.00 0.00 0.00 2.93
2096 6289 2.170817 GGTTCTTCATCCTGGGGAGTAC 59.829 54.545 0.00 0.00 34.05 2.73
2176 6369 2.102588 AGTACGATGACAAGGTATGCCC 59.897 50.000 0.00 0.00 34.57 5.36
2177 6370 0.908910 ACGATGACAAGGTATGCCCA 59.091 50.000 0.00 0.00 34.66 5.36
2179 6372 1.670811 CGATGACAAGGTATGCCCAAC 59.329 52.381 0.00 0.00 34.66 3.77
2180 6373 2.024414 GATGACAAGGTATGCCCAACC 58.976 52.381 0.00 0.00 37.27 3.77
2192 6403 1.977293 GCCCAACCTTTTTGGCCACA 61.977 55.000 3.88 0.00 37.53 4.17
2193 6406 0.764271 CCCAACCTTTTTGGCCACAT 59.236 50.000 3.88 0.00 40.22 3.21
2198 6411 3.683365 ACCTTTTTGGCCACATGAATC 57.317 42.857 3.88 0.00 40.22 2.52
2221 6434 3.427233 GCACAAATCTGAACATCTCCTGC 60.427 47.826 0.00 0.00 0.00 4.85
2331 6544 0.962356 CTGCCCTTTCACTCGCCAAT 60.962 55.000 0.00 0.00 0.00 3.16
2332 6545 1.243342 TGCCCTTTCACTCGCCAATG 61.243 55.000 0.00 0.00 0.00 2.82
2333 6546 1.937546 GCCCTTTCACTCGCCAATGG 61.938 60.000 0.00 0.00 0.00 3.16
2346 6559 2.480073 CGCCAATGGTGTTCAATCATCC 60.480 50.000 4.35 0.00 0.00 3.51
2348 6561 3.953612 GCCAATGGTGTTCAATCATCCTA 59.046 43.478 0.00 0.00 0.00 2.94
2354 6567 6.312141 TGGTGTTCAATCATCCTATCAGAA 57.688 37.500 0.00 0.00 0.00 3.02
2367 6580 7.653713 TCATCCTATCAGAAACTTAGATTTCGC 59.346 37.037 0.00 0.00 42.37 4.70
2371 6584 6.801539 ATCAGAAACTTAGATTTCGCAACA 57.198 33.333 0.00 0.00 42.37 3.33
2377 6590 4.246458 ACTTAGATTTCGCAACAGTCCTC 58.754 43.478 0.00 0.00 0.00 3.71
2378 6591 2.100605 AGATTTCGCAACAGTCCTCC 57.899 50.000 0.00 0.00 0.00 4.30
2379 6592 1.625818 AGATTTCGCAACAGTCCTCCT 59.374 47.619 0.00 0.00 0.00 3.69
2380 6593 2.039084 AGATTTCGCAACAGTCCTCCTT 59.961 45.455 0.00 0.00 0.00 3.36
2381 6594 1.593196 TTTCGCAACAGTCCTCCTTG 58.407 50.000 0.00 0.00 0.00 3.61
2382 6595 0.250295 TTCGCAACAGTCCTCCTTGG 60.250 55.000 0.00 0.00 37.10 3.61
2383 6596 2.328099 CGCAACAGTCCTCCTTGGC 61.328 63.158 0.00 0.00 35.26 4.52
2384 6597 1.073897 GCAACAGTCCTCCTTGGCT 59.926 57.895 0.00 0.00 35.26 4.75
2385 6598 0.957888 GCAACAGTCCTCCTTGGCTC 60.958 60.000 0.00 0.00 35.26 4.70
2386 6599 0.397941 CAACAGTCCTCCTTGGCTCA 59.602 55.000 0.00 0.00 35.26 4.26
2387 6600 0.398318 AACAGTCCTCCTTGGCTCAC 59.602 55.000 0.00 0.00 35.26 3.51
2388 6601 0.764369 ACAGTCCTCCTTGGCTCACA 60.764 55.000 0.00 0.00 35.26 3.58
2389 6602 0.321122 CAGTCCTCCTTGGCTCACAC 60.321 60.000 0.00 0.00 35.26 3.82
2412 6625 4.142945 CGTTCCTTTCTTCAGATGCTTCAG 60.143 45.833 2.07 0.00 0.00 3.02
2547 6763 2.202987 CTGGTCATGCCGCCTCTC 60.203 66.667 0.00 0.00 41.21 3.20
2550 6766 4.554036 GTCATGCCGCCTCTCCCC 62.554 72.222 0.00 0.00 0.00 4.81
2551 6767 4.804420 TCATGCCGCCTCTCCCCT 62.804 66.667 0.00 0.00 0.00 4.79
2630 6848 1.221466 TTTCAGTGAAGCGGCTGTCG 61.221 55.000 1.81 0.00 42.76 4.35
2690 6908 1.081840 GCCACGCTGAAACTGAAGC 60.082 57.895 0.00 0.00 36.03 3.86
2741 6962 0.394565 AGCATAGGATCCGTTGGCTC 59.605 55.000 14.78 2.48 0.00 4.70
2837 7107 3.828875 AGCTTAGGACTGGCTGATTAC 57.171 47.619 0.00 0.00 34.82 1.89
2847 7117 6.384305 AGGACTGGCTGATTACTTTACTGTAT 59.616 38.462 0.00 0.00 0.00 2.29
2931 7204 9.314321 AGTCTACCAGTATAAATGAAAATGACG 57.686 33.333 0.00 0.00 0.00 4.35
2933 7206 9.309516 TCTACCAGTATAAATGAAAATGACGAC 57.690 33.333 0.00 0.00 0.00 4.34
2936 7209 9.661563 ACCAGTATAAATGAAAATGACGACTAA 57.338 29.630 0.00 0.00 0.00 2.24
2937 7210 9.916397 CCAGTATAAATGAAAATGACGACTAAC 57.084 33.333 0.00 0.00 0.00 2.34
2938 7211 9.916397 CAGTATAAATGAAAATGACGACTAACC 57.084 33.333 0.00 0.00 0.00 2.85
2940 7213 9.916397 GTATAAATGAAAATGACGACTAACCTG 57.084 33.333 0.00 0.00 0.00 4.00
2941 7214 5.880054 AATGAAAATGACGACTAACCTGG 57.120 39.130 0.00 0.00 0.00 4.45
2942 7215 4.610605 TGAAAATGACGACTAACCTGGA 57.389 40.909 0.00 0.00 0.00 3.86
2946 7219 6.148811 TGAAAATGACGACTAACCTGGAATTC 59.851 38.462 0.00 0.00 0.00 2.17
2947 7220 3.226346 TGACGACTAACCTGGAATTCG 57.774 47.619 0.00 6.37 0.00 3.34
2948 7221 1.925185 GACGACTAACCTGGAATTCGC 59.075 52.381 0.00 0.00 0.00 4.70
2950 7223 2.028385 ACGACTAACCTGGAATTCGCTT 60.028 45.455 0.00 0.00 0.00 4.68
2953 7226 4.254492 GACTAACCTGGAATTCGCTTCTT 58.746 43.478 0.00 0.00 34.08 2.52
2954 7227 5.416271 ACTAACCTGGAATTCGCTTCTTA 57.584 39.130 0.00 0.00 34.08 2.10
2958 7653 5.567138 ACCTGGAATTCGCTTCTTATTTG 57.433 39.130 0.00 0.00 34.08 2.32
2967 7662 6.436843 TTCGCTTCTTATTTGGATCTTTCC 57.563 37.500 0.00 0.00 42.94 3.13
2973 7668 7.770897 GCTTCTTATTTGGATCTTTCCTGACTA 59.229 37.037 0.00 0.00 43.07 2.59
3006 7708 9.672086 TTTCGGAATGTAAGAAAAACAATACTG 57.328 29.630 0.00 0.00 31.82 2.74
3014 7716 5.904362 AGAAAAACAATACTGCCTCCATC 57.096 39.130 0.00 0.00 0.00 3.51
3015 7717 5.574188 AGAAAAACAATACTGCCTCCATCT 58.426 37.500 0.00 0.00 0.00 2.90
3017 7719 4.574674 AAACAATACTGCCTCCATCTGA 57.425 40.909 0.00 0.00 0.00 3.27
3018 7720 4.574674 AACAATACTGCCTCCATCTGAA 57.425 40.909 0.00 0.00 0.00 3.02
3019 7721 4.574674 ACAATACTGCCTCCATCTGAAA 57.425 40.909 0.00 0.00 0.00 2.69
3020 7722 5.121380 ACAATACTGCCTCCATCTGAAAT 57.879 39.130 0.00 0.00 0.00 2.17
3021 7723 5.513233 ACAATACTGCCTCCATCTGAAATT 58.487 37.500 0.00 0.00 0.00 1.82
3023 7725 6.543831 ACAATACTGCCTCCATCTGAAATTAC 59.456 38.462 0.00 0.00 0.00 1.89
3024 7726 4.851639 ACTGCCTCCATCTGAAATTACT 57.148 40.909 0.00 0.00 0.00 2.24
3026 7728 4.946157 ACTGCCTCCATCTGAAATTACTTG 59.054 41.667 0.00 0.00 0.00 3.16
3027 7729 4.922206 TGCCTCCATCTGAAATTACTTGT 58.078 39.130 0.00 0.00 0.00 3.16
3028 7730 4.943705 TGCCTCCATCTGAAATTACTTGTC 59.056 41.667 0.00 0.00 0.00 3.18
3030 7732 5.163713 GCCTCCATCTGAAATTACTTGTCAC 60.164 44.000 0.00 0.00 0.00 3.67
3034 7736 9.166173 CTCCATCTGAAATTACTTGTCACATAA 57.834 33.333 0.00 0.00 0.00 1.90
3094 7859 8.177119 AGTCTAGATACATCCATTTCTCTGAC 57.823 38.462 0.00 0.00 0.00 3.51
3098 7863 6.590068 AGATACATCCATTTCTCTGACAAGG 58.410 40.000 0.00 0.00 0.00 3.61
3099 7864 4.916041 ACATCCATTTCTCTGACAAGGA 57.084 40.909 0.00 0.00 0.00 3.36
3100 7865 5.246981 ACATCCATTTCTCTGACAAGGAA 57.753 39.130 0.00 0.00 0.00 3.36
3103 7868 6.723052 ACATCCATTTCTCTGACAAGGAATTT 59.277 34.615 0.00 0.00 0.00 1.82
3104 7869 6.824305 TCCATTTCTCTGACAAGGAATTTC 57.176 37.500 0.00 0.00 0.00 2.17
3105 7870 5.412594 TCCATTTCTCTGACAAGGAATTTCG 59.587 40.000 0.00 0.00 0.00 3.46
3106 7871 5.392380 CCATTTCTCTGACAAGGAATTTCGG 60.392 44.000 0.00 0.00 0.00 4.30
3107 7872 4.617253 TTCTCTGACAAGGAATTTCGGA 57.383 40.909 0.00 0.00 0.00 4.55
3108 7873 4.826274 TCTCTGACAAGGAATTTCGGAT 57.174 40.909 0.00 0.00 0.00 4.18
3109 7874 4.507710 TCTCTGACAAGGAATTTCGGATG 58.492 43.478 0.00 0.00 0.00 3.51
3110 7875 3.609853 TCTGACAAGGAATTTCGGATGG 58.390 45.455 0.00 0.00 0.00 3.51
3111 7876 3.263170 TCTGACAAGGAATTTCGGATGGA 59.737 43.478 0.00 0.00 0.00 3.41
3112 7877 3.609853 TGACAAGGAATTTCGGATGGAG 58.390 45.455 0.00 0.00 0.00 3.86
3113 7878 2.945668 GACAAGGAATTTCGGATGGAGG 59.054 50.000 0.00 0.00 0.00 4.30
3114 7879 2.301346 CAAGGAATTTCGGATGGAGGG 58.699 52.381 0.00 0.00 0.00 4.30
3115 7880 1.893315 AGGAATTTCGGATGGAGGGA 58.107 50.000 0.00 0.00 0.00 4.20
3116 7881 1.771255 AGGAATTTCGGATGGAGGGAG 59.229 52.381 0.00 0.00 0.00 4.30
3121 7954 2.767644 TTCGGATGGAGGGAGTATCA 57.232 50.000 0.00 0.00 36.25 2.15
3122 7955 2.767644 TCGGATGGAGGGAGTATCAA 57.232 50.000 0.00 0.00 36.25 2.57
3135 7968 3.559171 GGAGTATCAAAGCCAACACCAGA 60.559 47.826 0.00 0.00 36.25 3.86
3138 7971 5.815581 AGTATCAAAGCCAACACCAGATAA 58.184 37.500 0.00 0.00 0.00 1.75
3139 7972 6.245408 AGTATCAAAGCCAACACCAGATAAA 58.755 36.000 0.00 0.00 0.00 1.40
3140 7973 4.846779 TCAAAGCCAACACCAGATAAAC 57.153 40.909 0.00 0.00 0.00 2.01
3211 8045 7.385267 TGGATGATTTTGACCCAAATTTGTAG 58.615 34.615 16.73 10.16 33.19 2.74
3215 8049 7.432869 TGATTTTGACCCAAATTTGTAGTGAG 58.567 34.615 16.73 0.55 33.19 3.51
3229 8066 3.745975 TGTAGTGAGCCTTGAAAATCACG 59.254 43.478 0.00 0.00 45.25 4.35
3235 8072 2.554032 AGCCTTGAAAATCACGTTCCAG 59.446 45.455 0.00 0.00 0.00 3.86
3242 8082 1.148310 AATCACGTTCCAGCACTTCG 58.852 50.000 0.00 0.00 0.00 3.79
3257 8098 4.932200 AGCACTTCGGAAATTACAGAGAAG 59.068 41.667 1.98 1.98 40.40 2.85
3362 8219 1.077930 CCCTCCACATGCTGACCTG 60.078 63.158 0.00 0.00 0.00 4.00
3653 8510 1.080705 CGAGAGGAACGTGGTGTCC 60.081 63.158 0.00 0.00 0.00 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 8.899771 GGGCACACATAGTATTTACTGTAATTT 58.100 33.333 0.37 0.00 37.10 1.82
28 29 8.050325 TGGGCACACATAGTATTTACTGTAATT 58.950 33.333 0.37 0.85 37.10 1.40
29 30 7.570132 TGGGCACACATAGTATTTACTGTAAT 58.430 34.615 0.37 0.00 37.10 1.89
30 31 6.948589 TGGGCACACATAGTATTTACTGTAA 58.051 36.000 0.00 0.00 37.10 2.41
31 32 6.155565 ACTGGGCACACATAGTATTTACTGTA 59.844 38.462 0.45 0.00 37.10 2.74
32 33 5.045869 ACTGGGCACACATAGTATTTACTGT 60.046 40.000 0.45 0.00 37.10 3.55
34 35 5.693769 ACTGGGCACACATAGTATTTACT 57.306 39.130 0.00 0.00 40.24 2.24
35 36 6.579865 ACTACTGGGCACACATAGTATTTAC 58.420 40.000 6.39 0.00 0.00 2.01
36 37 6.801718 ACTACTGGGCACACATAGTATTTA 57.198 37.500 6.39 0.00 0.00 1.40
37 38 5.693769 ACTACTGGGCACACATAGTATTT 57.306 39.130 6.39 0.00 0.00 1.40
38 39 6.782988 AGATACTACTGGGCACACATAGTATT 59.217 38.462 21.24 12.82 38.54 1.89
39 40 6.209589 CAGATACTACTGGGCACACATAGTAT 59.790 42.308 20.76 20.76 40.23 2.12
41 42 4.342378 CAGATACTACTGGGCACACATAGT 59.658 45.833 11.84 11.84 34.64 2.12
42 43 4.876125 CAGATACTACTGGGCACACATAG 58.124 47.826 1.61 1.61 34.64 2.23
43 44 4.937201 CAGATACTACTGGGCACACATA 57.063 45.455 0.00 0.00 34.64 2.29
44 45 3.827008 CAGATACTACTGGGCACACAT 57.173 47.619 0.00 0.00 34.64 3.21
53 54 6.098982 ACCTCAGAATTTCCCAGATACTACTG 59.901 42.308 0.00 0.00 37.61 2.74
55 56 6.487299 ACCTCAGAATTTCCCAGATACTAC 57.513 41.667 0.00 0.00 0.00 2.73
56 57 8.798975 ATTACCTCAGAATTTCCCAGATACTA 57.201 34.615 0.00 0.00 0.00 1.82
58 59 8.624776 CAAATTACCTCAGAATTTCCCAGATAC 58.375 37.037 0.00 0.00 34.93 2.24
59 60 7.779798 CCAAATTACCTCAGAATTTCCCAGATA 59.220 37.037 0.00 0.00 34.93 1.98
60 61 6.608808 CCAAATTACCTCAGAATTTCCCAGAT 59.391 38.462 0.00 0.00 34.93 2.90
61 62 5.951747 CCAAATTACCTCAGAATTTCCCAGA 59.048 40.000 0.00 0.00 34.93 3.86
63 64 5.022787 CCCAAATTACCTCAGAATTTCCCA 58.977 41.667 0.00 0.00 34.93 4.37
64 65 5.023452 ACCCAAATTACCTCAGAATTTCCC 58.977 41.667 0.00 0.00 34.93 3.97
65 66 6.398095 CAACCCAAATTACCTCAGAATTTCC 58.602 40.000 0.00 0.00 34.93 3.13
66 67 5.869344 GCAACCCAAATTACCTCAGAATTTC 59.131 40.000 0.00 0.00 34.93 2.17
67 68 5.306678 TGCAACCCAAATTACCTCAGAATTT 59.693 36.000 0.00 0.00 37.04 1.82
68 69 4.837860 TGCAACCCAAATTACCTCAGAATT 59.162 37.500 0.00 0.00 0.00 2.17
69 70 4.415596 TGCAACCCAAATTACCTCAGAAT 58.584 39.130 0.00 0.00 0.00 2.40
70 71 3.838565 TGCAACCCAAATTACCTCAGAA 58.161 40.909 0.00 0.00 0.00 3.02
71 72 3.517296 TGCAACCCAAATTACCTCAGA 57.483 42.857 0.00 0.00 0.00 3.27
73 74 3.838565 TCTTGCAACCCAAATTACCTCA 58.161 40.909 0.00 0.00 31.94 3.86
74 75 5.405935 AATCTTGCAACCCAAATTACCTC 57.594 39.130 0.00 0.00 31.94 3.85
75 76 5.823861 AAATCTTGCAACCCAAATTACCT 57.176 34.783 0.00 0.00 31.94 3.08
76 77 5.994668 TCAAAATCTTGCAACCCAAATTACC 59.005 36.000 0.00 0.00 31.94 2.85
77 78 6.928492 TCTCAAAATCTTGCAACCCAAATTAC 59.072 34.615 0.00 0.00 31.94 1.89
78 79 7.060383 TCTCAAAATCTTGCAACCCAAATTA 57.940 32.000 0.00 0.00 31.94 1.40
83 84 6.351202 CCAATATCTCAAAATCTTGCAACCCA 60.351 38.462 0.00 0.00 32.14 4.51
84 85 6.044682 CCAATATCTCAAAATCTTGCAACCC 58.955 40.000 0.00 0.00 32.14 4.11
85 86 5.521372 GCCAATATCTCAAAATCTTGCAACC 59.479 40.000 0.00 0.00 32.14 3.77
86 87 6.335777 AGCCAATATCTCAAAATCTTGCAAC 58.664 36.000 0.00 0.00 32.14 4.17
89 90 9.538508 AAAATAGCCAATATCTCAAAATCTTGC 57.461 29.630 0.00 0.00 32.14 4.01
91 92 9.538508 GCAAAATAGCCAATATCTCAAAATCTT 57.461 29.630 0.00 0.00 0.00 2.40
97 98 8.965819 TGTTTAGCAAAATAGCCAATATCTCAA 58.034 29.630 0.00 0.00 34.23 3.02
98 99 8.518430 TGTTTAGCAAAATAGCCAATATCTCA 57.482 30.769 0.00 0.00 34.23 3.27
102 103 9.981114 GGTTATGTTTAGCAAAATAGCCAATAT 57.019 29.630 0.00 0.00 34.23 1.28
104 105 7.846066 TGGTTATGTTTAGCAAAATAGCCAAT 58.154 30.769 1.41 0.00 34.23 3.16
107 108 8.716646 AATTGGTTATGTTTAGCAAAATAGCC 57.283 30.769 0.00 0.00 36.68 3.93
160 161 9.236006 ACTATGCACTAGAATTGTTTCAGATTT 57.764 29.630 0.00 0.00 34.08 2.17
162 163 9.319143 GTACTATGCACTAGAATTGTTTCAGAT 57.681 33.333 0.00 0.00 34.08 2.90
163 164 8.311109 TGTACTATGCACTAGAATTGTTTCAGA 58.689 33.333 0.00 0.00 34.08 3.27
164 165 8.479313 TGTACTATGCACTAGAATTGTTTCAG 57.521 34.615 0.00 0.00 34.08 3.02
165 166 8.882736 CATGTACTATGCACTAGAATTGTTTCA 58.117 33.333 0.00 0.00 34.08 2.69
167 168 8.792830 ACATGTACTATGCACTAGAATTGTTT 57.207 30.769 0.00 0.00 0.00 2.83
168 169 8.792830 AACATGTACTATGCACTAGAATTGTT 57.207 30.769 0.00 4.06 0.00 2.83
169 170 8.792830 AAACATGTACTATGCACTAGAATTGT 57.207 30.769 0.00 0.00 0.00 2.71
171 172 9.448438 TGAAAACATGTACTATGCACTAGAATT 57.552 29.630 0.00 0.00 0.00 2.17
174 175 7.611770 ACTGAAAACATGTACTATGCACTAGA 58.388 34.615 0.00 0.00 0.00 2.43
175 176 7.834068 ACTGAAAACATGTACTATGCACTAG 57.166 36.000 0.00 0.00 0.00 2.57
176 177 8.528643 ACTACTGAAAACATGTACTATGCACTA 58.471 33.333 0.00 0.00 0.00 2.74
177 178 7.386851 ACTACTGAAAACATGTACTATGCACT 58.613 34.615 0.00 0.00 0.00 4.40
179 180 9.884636 AATACTACTGAAAACATGTACTATGCA 57.115 29.630 0.00 0.00 0.00 3.96
184 185 9.804758 GCTAGAATACTACTGAAAACATGTACT 57.195 33.333 0.00 0.00 0.00 2.73
187 188 9.502091 TTTGCTAGAATACTACTGAAAACATGT 57.498 29.630 0.00 0.00 0.00 3.21
195 196 9.162764 GGTCAAAATTTGCTAGAATACTACTGA 57.837 33.333 0.00 0.00 0.00 3.41
196 197 9.167311 AGGTCAAAATTTGCTAGAATACTACTG 57.833 33.333 0.00 0.00 0.00 2.74
197 198 9.740710 AAGGTCAAAATTTGCTAGAATACTACT 57.259 29.630 0.00 0.00 0.00 2.57
198 199 9.989869 GAAGGTCAAAATTTGCTAGAATACTAC 57.010 33.333 0.00 0.00 0.00 2.73
199 200 9.959721 AGAAGGTCAAAATTTGCTAGAATACTA 57.040 29.630 0.00 0.00 0.00 1.82
200 201 8.870075 AGAAGGTCAAAATTTGCTAGAATACT 57.130 30.769 0.00 0.00 0.00 2.12
202 203 9.912634 CAAAGAAGGTCAAAATTTGCTAGAATA 57.087 29.630 0.00 0.00 0.00 1.75
203 204 8.641541 TCAAAGAAGGTCAAAATTTGCTAGAAT 58.358 29.630 0.00 0.00 32.28 2.40
204 205 8.006298 TCAAAGAAGGTCAAAATTTGCTAGAA 57.994 30.769 0.00 0.00 32.28 2.10
205 206 7.581213 TCAAAGAAGGTCAAAATTTGCTAGA 57.419 32.000 0.00 0.00 32.28 2.43
207 208 9.442047 TTTTTCAAAGAAGGTCAAAATTTGCTA 57.558 25.926 0.00 0.00 32.28 3.49
208 209 7.920160 TTTTCAAAGAAGGTCAAAATTTGCT 57.080 28.000 0.00 0.00 32.28 3.91
256 257 3.065648 GGCTCAAAGTAACGGTGTGAAAA 59.934 43.478 0.00 0.00 0.00 2.29
258 259 2.215196 GGCTCAAAGTAACGGTGTGAA 58.785 47.619 0.00 0.00 0.00 3.18
260 261 0.872388 GGGCTCAAAGTAACGGTGTG 59.128 55.000 0.00 0.00 0.00 3.82
261 262 0.601841 CGGGCTCAAAGTAACGGTGT 60.602 55.000 0.00 0.00 0.00 4.16
263 264 1.670083 GCGGGCTCAAAGTAACGGT 60.670 57.895 0.00 0.00 0.00 4.83
268 269 1.485294 TTGAGGGCGGGCTCAAAGTA 61.485 55.000 11.82 0.00 36.75 2.24
269 270 2.142292 ATTGAGGGCGGGCTCAAAGT 62.142 55.000 16.04 3.57 41.99 2.66
271 272 0.541764 AAATTGAGGGCGGGCTCAAA 60.542 50.000 16.04 3.95 41.99 2.69
272 273 0.541764 AAAATTGAGGGCGGGCTCAA 60.542 50.000 14.99 14.99 42.72 3.02
273 274 0.965363 GAAAATTGAGGGCGGGCTCA 60.965 55.000 0.26 0.60 0.00 4.26
275 276 0.251787 AAGAAAATTGAGGGCGGGCT 60.252 50.000 0.26 0.00 0.00 5.19
278 279 1.544724 TGGAAGAAAATTGAGGGCGG 58.455 50.000 0.00 0.00 0.00 6.13
279 280 2.819608 TCTTGGAAGAAAATTGAGGGCG 59.180 45.455 0.00 0.00 30.73 6.13
281 282 5.644644 CGAATCTTGGAAGAAAATTGAGGG 58.355 41.667 0.00 0.00 38.77 4.30
282 283 5.098211 GCGAATCTTGGAAGAAAATTGAGG 58.902 41.667 0.00 0.00 38.77 3.86
283 284 5.098211 GGCGAATCTTGGAAGAAAATTGAG 58.902 41.667 0.00 0.00 38.77 3.02
284 285 4.522405 TGGCGAATCTTGGAAGAAAATTGA 59.478 37.500 0.00 0.00 38.77 2.57
285 286 4.622740 GTGGCGAATCTTGGAAGAAAATTG 59.377 41.667 0.00 0.00 38.77 2.32
286 287 4.524328 AGTGGCGAATCTTGGAAGAAAATT 59.476 37.500 0.00 0.00 38.77 1.82
287 288 4.082125 AGTGGCGAATCTTGGAAGAAAAT 58.918 39.130 0.00 0.00 38.77 1.82
289 290 2.813754 CAGTGGCGAATCTTGGAAGAAA 59.186 45.455 0.00 0.00 38.77 2.52
290 291 2.426522 CAGTGGCGAATCTTGGAAGAA 58.573 47.619 0.00 0.00 38.77 2.52
291 292 1.945819 GCAGTGGCGAATCTTGGAAGA 60.946 52.381 0.00 0.00 39.78 2.87
292 293 0.449388 GCAGTGGCGAATCTTGGAAG 59.551 55.000 0.00 0.00 0.00 3.46
293 294 2.555123 GCAGTGGCGAATCTTGGAA 58.445 52.632 0.00 0.00 0.00 3.53
307 308 1.032014 AAAATGTGCTTCCACGCAGT 58.968 45.000 0.00 0.00 45.04 4.40
326 327 3.810310 AGCACATTGAAACGGGAAAAA 57.190 38.095 0.00 0.00 0.00 1.94
327 328 3.383185 AGAAGCACATTGAAACGGGAAAA 59.617 39.130 0.00 0.00 0.00 2.29
328 329 2.955660 AGAAGCACATTGAAACGGGAAA 59.044 40.909 0.00 0.00 0.00 3.13
329 330 2.552315 GAGAAGCACATTGAAACGGGAA 59.448 45.455 0.00 0.00 0.00 3.97
333 334 2.220824 TCACGAGAAGCACATTGAAACG 59.779 45.455 0.00 0.00 0.00 3.60
334 335 3.878086 TCACGAGAAGCACATTGAAAC 57.122 42.857 0.00 0.00 0.00 2.78
337 338 2.807967 CCTTTCACGAGAAGCACATTGA 59.192 45.455 0.00 0.00 34.71 2.57
339 340 3.126001 TCCTTTCACGAGAAGCACATT 57.874 42.857 0.00 0.00 34.71 2.71
340 341 2.839486 TCCTTTCACGAGAAGCACAT 57.161 45.000 0.00 0.00 34.71 3.21
341 342 2.613026 TTCCTTTCACGAGAAGCACA 57.387 45.000 0.00 0.00 34.71 4.57
342 343 3.814945 CATTTCCTTTCACGAGAAGCAC 58.185 45.455 0.00 0.00 34.71 4.40
343 344 2.226437 GCATTTCCTTTCACGAGAAGCA 59.774 45.455 0.00 0.00 34.71 3.91
346 347 4.326826 AGATGCATTTCCTTTCACGAGAA 58.673 39.130 0.00 0.00 0.00 2.87
347 348 3.935203 GAGATGCATTTCCTTTCACGAGA 59.065 43.478 5.94 0.00 0.00 4.04
348 349 3.686241 TGAGATGCATTTCCTTTCACGAG 59.314 43.478 14.19 0.00 0.00 4.18
349 350 3.673902 TGAGATGCATTTCCTTTCACGA 58.326 40.909 14.19 0.00 0.00 4.35
350 351 4.348656 CATGAGATGCATTTCCTTTCACG 58.651 43.478 14.19 0.00 34.15 4.35
352 353 4.602107 TCCATGAGATGCATTTCCTTTCA 58.398 39.130 14.19 6.19 34.15 2.69
353 354 5.587388 TTCCATGAGATGCATTTCCTTTC 57.413 39.130 14.19 0.00 34.15 2.62
355 356 3.383825 GCTTCCATGAGATGCATTTCCTT 59.616 43.478 14.19 0.00 43.45 3.36
356 357 2.957006 GCTTCCATGAGATGCATTTCCT 59.043 45.455 14.19 2.01 43.45 3.36
357 358 3.366440 GCTTCCATGAGATGCATTTCC 57.634 47.619 14.19 1.33 43.45 3.13
363 364 3.795623 AAATGTGCTTCCATGAGATGC 57.204 42.857 12.27 12.27 44.08 3.91
385 386 2.679450 TGCTTACGCGAGCTTCTAAAA 58.321 42.857 15.93 0.00 43.11 1.52
386 387 2.357327 TGCTTACGCGAGCTTCTAAA 57.643 45.000 15.93 0.00 43.11 1.85
387 388 2.357327 TTGCTTACGCGAGCTTCTAA 57.643 45.000 15.93 0.00 43.11 2.10
388 389 2.357327 TTTGCTTACGCGAGCTTCTA 57.643 45.000 15.93 0.00 43.11 2.10
389 390 1.726853 ATTTGCTTACGCGAGCTTCT 58.273 45.000 15.93 0.00 43.11 2.85
390 391 3.001330 ACATATTTGCTTACGCGAGCTTC 59.999 43.478 15.93 0.00 43.11 3.86
392 393 2.285220 CACATATTTGCTTACGCGAGCT 59.715 45.455 15.93 0.00 43.11 4.09
394 395 2.599848 GGCACATATTTGCTTACGCGAG 60.600 50.000 15.93 0.36 42.56 5.03
395 396 1.329292 GGCACATATTTGCTTACGCGA 59.671 47.619 15.93 0.00 42.56 5.87
399 400 3.242739 CGTGGAGGCACATATTTGCTTAC 60.243 47.826 13.29 7.48 42.56 2.34
400 401 2.942376 CGTGGAGGCACATATTTGCTTA 59.058 45.455 13.29 0.00 42.56 3.09
401 402 1.745087 CGTGGAGGCACATATTTGCTT 59.255 47.619 13.29 5.98 42.56 3.91
402 403 1.065491 TCGTGGAGGCACATATTTGCT 60.065 47.619 13.29 0.24 42.56 3.91
403 404 1.378531 TCGTGGAGGCACATATTTGC 58.621 50.000 5.23 5.23 42.18 3.68
404 405 4.082787 ACTTTTCGTGGAGGCACATATTTG 60.083 41.667 0.00 0.00 0.00 2.32
405 406 4.079253 ACTTTTCGTGGAGGCACATATTT 58.921 39.130 0.00 0.00 0.00 1.40
406 407 3.686016 ACTTTTCGTGGAGGCACATATT 58.314 40.909 0.00 0.00 0.00 1.28
407 408 3.350219 ACTTTTCGTGGAGGCACATAT 57.650 42.857 0.00 0.00 0.00 1.78
409 410 2.851263 TACTTTTCGTGGAGGCACAT 57.149 45.000 0.00 0.00 0.00 3.21
410 411 2.158871 ACTTACTTTTCGTGGAGGCACA 60.159 45.455 0.00 0.00 0.00 4.57
411 412 2.479275 GACTTACTTTTCGTGGAGGCAC 59.521 50.000 0.00 0.00 0.00 5.01
412 413 2.367567 AGACTTACTTTTCGTGGAGGCA 59.632 45.455 0.00 0.00 0.00 4.75
413 414 3.041508 AGACTTACTTTTCGTGGAGGC 57.958 47.619 0.00 0.00 0.00 4.70
415 416 5.986004 ACAAAGACTTACTTTTCGTGGAG 57.014 39.130 0.00 0.00 45.22 3.86
416 417 6.596497 AGAAACAAAGACTTACTTTTCGTGGA 59.404 34.615 0.00 0.00 45.22 4.02
417 418 6.782150 AGAAACAAAGACTTACTTTTCGTGG 58.218 36.000 0.00 0.00 45.22 4.94
418 419 7.461107 TGAGAAACAAAGACTTACTTTTCGTG 58.539 34.615 0.00 0.00 45.22 4.35
419 420 7.548075 TCTGAGAAACAAAGACTTACTTTTCGT 59.452 33.333 0.00 0.00 45.22 3.85
421 422 9.099454 TCTCTGAGAAACAAAGACTTACTTTTC 57.901 33.333 4.57 7.53 45.22 2.29
422 423 9.449719 TTCTCTGAGAAACAAAGACTTACTTTT 57.550 29.630 17.32 0.00 37.72 2.27
425 426 8.424918 TGATTCTCTGAGAAACAAAGACTTACT 58.575 33.333 22.96 4.78 37.82 2.24
426 427 8.594881 TGATTCTCTGAGAAACAAAGACTTAC 57.405 34.615 22.96 6.53 37.82 2.34
427 428 9.613428 TTTGATTCTCTGAGAAACAAAGACTTA 57.387 29.630 33.47 20.78 45.61 2.24
428 429 8.511604 TTTGATTCTCTGAGAAACAAAGACTT 57.488 30.769 33.47 14.94 45.61 3.01
435 436 9.650539 CTTCTAGATTTGATTCTCTGAGAAACA 57.349 33.333 22.68 22.22 37.82 2.83
436 437 9.868277 TCTTCTAGATTTGATTCTCTGAGAAAC 57.132 33.333 22.68 20.02 37.82 2.78
438 439 9.868277 GTTCTTCTAGATTTGATTCTCTGAGAA 57.132 33.333 21.32 21.32 38.78 2.87
439 440 9.253832 AGTTCTTCTAGATTTGATTCTCTGAGA 57.746 33.333 2.58 2.58 0.00 3.27
440 441 9.874205 AAGTTCTTCTAGATTTGATTCTCTGAG 57.126 33.333 0.00 0.00 0.00 3.35
470 471 6.734171 CACAAATTTGTTTTCGCGAAAGAAAA 59.266 30.769 30.60 30.01 41.84 2.29
471 472 6.128795 ACACAAATTTGTTTTCGCGAAAGAAA 60.129 30.769 30.60 29.23 42.45 2.52
472 473 5.346281 ACACAAATTTGTTTTCGCGAAAGAA 59.654 32.000 30.60 25.16 39.91 2.52
474 475 5.004345 AGACACAAATTTGTTTTCGCGAAAG 59.996 36.000 30.60 19.96 39.91 2.62
476 477 4.416620 AGACACAAATTTGTTTTCGCGAA 58.583 34.783 21.10 19.38 39.91 4.70
479 480 5.480603 GTGAAGACACAAATTTGTTTTCGC 58.519 37.500 21.10 22.64 41.37 4.70
498 499 2.224079 GCACAGATTTGCTTCTCGTGAA 59.776 45.455 0.00 0.00 39.59 3.18
509 510 3.624326 TCCACGAAAAGCACAGATTTG 57.376 42.857 0.00 0.00 0.00 2.32
576 579 4.440940 CGCCCAGTTTTTCTTAGGTTTTGT 60.441 41.667 0.00 0.00 0.00 2.83
593 596 2.362717 TGGGTTTTTAGTTTTCGCCCAG 59.637 45.455 0.00 0.00 39.50 4.45
594 597 2.385803 TGGGTTTTTAGTTTTCGCCCA 58.614 42.857 0.00 0.00 41.82 5.36
606 609 4.853468 ACATGGGTTTTCTTGGGTTTTT 57.147 36.364 0.00 0.00 0.00 1.94
613 616 3.570550 TCGGGTTTACATGGGTTTTCTTG 59.429 43.478 0.00 0.00 0.00 3.02
615 618 3.512219 TCGGGTTTACATGGGTTTTCT 57.488 42.857 0.00 0.00 0.00 2.52
616 619 4.587584 TTTCGGGTTTACATGGGTTTTC 57.412 40.909 0.00 0.00 0.00 2.29
621 624 5.845391 ACATATTTTCGGGTTTACATGGG 57.155 39.130 0.00 0.00 0.00 4.00
622 625 8.215926 TCTTACATATTTTCGGGTTTACATGG 57.784 34.615 0.00 0.00 0.00 3.66
651 657 9.077885 GCACCCTCTGAATTCCATATTTATTTA 57.922 33.333 2.27 0.00 0.00 1.40
654 660 6.491403 GTGCACCCTCTGAATTCCATATTTAT 59.509 38.462 5.22 0.00 0.00 1.40
656 662 4.646492 GTGCACCCTCTGAATTCCATATTT 59.354 41.667 5.22 0.00 0.00 1.40
657 663 4.210331 GTGCACCCTCTGAATTCCATATT 58.790 43.478 5.22 0.00 0.00 1.28
658 664 3.435601 GGTGCACCCTCTGAATTCCATAT 60.436 47.826 26.31 0.00 0.00 1.78
675 681 1.271108 ACATATCACGTGTTGGGTGCA 60.271 47.619 16.51 0.00 35.39 4.57
689 695 3.633235 CGTCTAGCCACTGTCACATATC 58.367 50.000 0.00 0.00 0.00 1.63
764 773 9.496873 TGTTCTATCGGAGAAACTAAAATGAAA 57.503 29.630 2.73 0.00 45.90 2.69
766 775 8.311836 ACTGTTCTATCGGAGAAACTAAAATGA 58.688 33.333 2.73 0.00 45.90 2.57
768 777 9.503399 AAACTGTTCTATCGGAGAAACTAAAAT 57.497 29.630 0.00 0.00 45.90 1.82
770 779 8.897872 AAAACTGTTCTATCGGAGAAACTAAA 57.102 30.769 0.00 0.00 45.90 1.85
803 812 4.537751 ACTGTTCTATCGGAGGATCTCAA 58.462 43.478 0.00 0.00 34.00 3.02
804 813 4.171878 ACTGTTCTATCGGAGGATCTCA 57.828 45.455 0.00 0.00 34.00 3.27
807 816 4.321378 GCCTAACTGTTCTATCGGAGGATC 60.321 50.000 7.31 0.00 34.00 3.36
809 818 2.957006 GCCTAACTGTTCTATCGGAGGA 59.043 50.000 7.31 0.00 0.00 3.71
812 821 1.066605 GCGCCTAACTGTTCTATCGGA 59.933 52.381 0.00 0.00 0.00 4.55
813 822 1.202371 TGCGCCTAACTGTTCTATCGG 60.202 52.381 4.18 0.00 0.00 4.18
814 823 2.120232 CTGCGCCTAACTGTTCTATCG 58.880 52.381 4.18 0.00 0.00 2.92
815 824 2.100916 TCCTGCGCCTAACTGTTCTATC 59.899 50.000 4.18 0.00 0.00 2.08
819 828 0.037232 ACTCCTGCGCCTAACTGTTC 60.037 55.000 4.18 0.00 0.00 3.18
822 831 1.103803 TCTACTCCTGCGCCTAACTG 58.896 55.000 4.18 0.00 0.00 3.16
823 832 1.751924 CTTCTACTCCTGCGCCTAACT 59.248 52.381 4.18 0.00 0.00 2.24
824 833 1.749634 TCTTCTACTCCTGCGCCTAAC 59.250 52.381 4.18 0.00 0.00 2.34
826 835 2.139323 TTCTTCTACTCCTGCGCCTA 57.861 50.000 4.18 0.00 0.00 3.93
827 836 1.490574 ATTCTTCTACTCCTGCGCCT 58.509 50.000 4.18 0.00 0.00 5.52
830 839 5.109662 TCGATTATTCTTCTACTCCTGCG 57.890 43.478 0.00 0.00 0.00 5.18
833 842 5.046950 GCCCATCGATTATTCTTCTACTCCT 60.047 44.000 0.00 0.00 0.00 3.69
834 843 5.046950 AGCCCATCGATTATTCTTCTACTCC 60.047 44.000 0.00 0.00 0.00 3.85
875 2746 1.556911 GTGAGCCCAGGATGAGAAAGA 59.443 52.381 0.00 0.00 39.69 2.52
901 2772 2.883386 GCAAAGAGCCCCATTATCTCAG 59.117 50.000 0.00 0.00 37.23 3.35
961 2834 0.599558 CCGTACCAACCGAGACAGAA 59.400 55.000 0.00 0.00 0.00 3.02
963 2836 1.214589 CCCGTACCAACCGAGACAG 59.785 63.158 0.00 0.00 0.00 3.51
971 2844 1.376812 CTGGAAGGCCCGTACCAAC 60.377 63.158 0.00 0.00 37.93 3.77
1258 3131 1.636769 GGGAGGGAGCTTAGGGTTGG 61.637 65.000 0.00 0.00 0.00 3.77
1260 3133 0.121402 AAGGGAGGGAGCTTAGGGTT 59.879 55.000 0.00 0.00 0.00 4.11
1265 3138 1.212935 GCAATCAAGGGAGGGAGCTTA 59.787 52.381 0.00 0.00 0.00 3.09
1294 3167 5.163992 GCAGAATCGATTGTTACAAGACGAA 60.164 40.000 24.25 13.75 33.77 3.85
1305 3181 0.911769 TCTGGGGCAGAATCGATTGT 59.088 50.000 16.96 9.03 37.57 2.71
1378 5428 2.897350 GGTGCGCTGGATGTAGGC 60.897 66.667 9.73 0.00 0.00 3.93
1485 5535 3.188460 CGATGGTGGAAACAAGAATTCGT 59.812 43.478 0.00 0.00 46.06 3.85
1486 5536 3.435327 TCGATGGTGGAAACAAGAATTCG 59.565 43.478 0.00 0.00 46.06 3.34
1645 5734 8.135529 AGTTGGAAAGCACTAAACAAATAGTTC 58.864 33.333 0.00 0.00 40.26 3.01
1667 5761 4.853924 ATTGGCAGTTTCAACCTAGTTG 57.146 40.909 0.96 0.96 43.99 3.16
1678 5772 7.332678 GCTCTATCAATTCAAAATTGGCAGTTT 59.667 33.333 11.37 1.71 0.00 2.66
1684 5778 8.030692 TCAACAGCTCTATCAATTCAAAATTGG 58.969 33.333 11.37 0.00 0.00 3.16
1733 5827 2.650116 GCTGCCGGGACAAGAGAGA 61.650 63.158 2.18 0.00 0.00 3.10
1745 5839 2.355126 AGTATCGCATCGCTGCCG 60.355 61.111 5.53 1.30 46.07 5.69
1843 5952 7.201696 GGATGAGTGGCATATTTTCGTTTTCTA 60.202 37.037 0.00 0.00 37.34 2.10
1847 5956 4.949856 AGGATGAGTGGCATATTTTCGTTT 59.050 37.500 0.00 0.00 37.34 3.60
1850 5959 4.576053 TGAAGGATGAGTGGCATATTTTCG 59.424 41.667 0.00 0.00 37.34 3.46
1851 5960 5.591877 AGTGAAGGATGAGTGGCATATTTTC 59.408 40.000 0.00 0.00 37.34 2.29
1869 5978 6.571605 TGATCTATTTCTCAGCTGAGTGAAG 58.428 40.000 36.32 27.79 42.60 3.02
1871 5980 6.728089 ATGATCTATTTCTCAGCTGAGTGA 57.272 37.500 36.32 27.15 42.60 3.41
1872 5981 8.358895 TCTAATGATCTATTTCTCAGCTGAGTG 58.641 37.037 36.32 23.21 42.60 3.51
1873 5982 8.359642 GTCTAATGATCTATTTCTCAGCTGAGT 58.640 37.037 36.32 23.46 42.60 3.41
1874 5983 7.538334 CGTCTAATGATCTATTTCTCAGCTGAG 59.462 40.741 33.73 33.73 43.36 3.35
1888 6074 8.446273 CAGATGTTGAAAAACGTCTAATGATCT 58.554 33.333 11.82 0.00 44.70 2.75
1889 6075 8.230486 ACAGATGTTGAAAAACGTCTAATGATC 58.770 33.333 11.82 0.00 44.70 2.92
1959 6148 6.186957 ACTCCACCATGTTTAGCATCATTAA 58.813 36.000 0.00 0.00 35.19 1.40
1984 6173 3.679083 GCCTTACTTATCACGCTGAACCT 60.679 47.826 0.00 0.00 0.00 3.50
2012 6202 3.350912 CCAAAAATTCGATCGCCTAACG 58.649 45.455 11.09 0.00 45.62 3.18
2026 6216 5.046288 TGGATTTCTGTTTGCCCAAAAAT 57.954 34.783 0.00 0.00 31.33 1.82
2027 6217 4.080638 ACTGGATTTCTGTTTGCCCAAAAA 60.081 37.500 0.00 0.00 31.33 1.94
2028 6218 3.454082 ACTGGATTTCTGTTTGCCCAAAA 59.546 39.130 0.00 0.00 31.33 2.44
2029 6219 3.037549 ACTGGATTTCTGTTTGCCCAAA 58.962 40.909 0.00 0.00 0.00 3.28
2034 6227 3.988379 TGTGACTGGATTTCTGTTTGC 57.012 42.857 0.00 0.00 0.00 3.68
2070 6263 1.141858 CCCAGGATGAAGAACCCTAGC 59.858 57.143 0.00 0.00 39.69 3.42
2176 6369 2.906691 TCATGTGGCCAAAAAGGTTG 57.093 45.000 7.24 0.00 40.61 3.77
2177 6370 3.554752 CGATTCATGTGGCCAAAAAGGTT 60.555 43.478 7.24 0.00 40.61 3.50
2179 6372 2.609350 CGATTCATGTGGCCAAAAAGG 58.391 47.619 7.24 0.00 41.84 3.11
2180 6373 1.994779 GCGATTCATGTGGCCAAAAAG 59.005 47.619 7.24 0.00 0.00 2.27
2186 6397 0.243365 TTTGTGCGATTCATGTGGCC 59.757 50.000 0.00 0.00 0.00 5.36
2192 6403 5.356190 AGATGTTCAGATTTGTGCGATTCAT 59.644 36.000 0.00 0.00 0.00 2.57
2193 6406 4.696877 AGATGTTCAGATTTGTGCGATTCA 59.303 37.500 0.00 0.00 0.00 2.57
2198 6411 3.005554 AGGAGATGTTCAGATTTGTGCG 58.994 45.455 0.00 0.00 0.00 5.34
2221 6434 0.317160 TCCACAAGTCTACCTGCACG 59.683 55.000 0.00 0.00 0.00 5.34
2316 6529 0.523072 CACCATTGGCGAGTGAAAGG 59.477 55.000 1.54 0.00 33.21 3.11
2331 6544 5.955961 TCTGATAGGATGATTGAACACCA 57.044 39.130 0.00 0.00 0.00 4.17
2332 6545 6.825721 AGTTTCTGATAGGATGATTGAACACC 59.174 38.462 0.00 0.00 0.00 4.16
2333 6546 7.856145 AGTTTCTGATAGGATGATTGAACAC 57.144 36.000 0.00 0.00 0.00 3.32
2346 6559 7.963981 TGTTGCGAAATCTAAGTTTCTGATAG 58.036 34.615 0.00 0.00 36.25 2.08
2348 6561 6.428159 ACTGTTGCGAAATCTAAGTTTCTGAT 59.572 34.615 0.00 0.00 36.25 2.90
2354 6567 4.642429 AGGACTGTTGCGAAATCTAAGTT 58.358 39.130 0.00 0.00 0.00 2.66
2367 6580 0.397941 TGAGCCAAGGAGGACTGTTG 59.602 55.000 0.00 0.00 41.22 3.33
2371 6584 1.821061 CGTGTGAGCCAAGGAGGACT 61.821 60.000 0.00 0.00 41.22 3.85
2377 6590 0.535102 AAGGAACGTGTGAGCCAAGG 60.535 55.000 0.00 0.00 0.00 3.61
2378 6591 1.264288 GAAAGGAACGTGTGAGCCAAG 59.736 52.381 0.00 0.00 0.00 3.61
2379 6592 1.134220 AGAAAGGAACGTGTGAGCCAA 60.134 47.619 0.00 0.00 0.00 4.52
2380 6593 0.468226 AGAAAGGAACGTGTGAGCCA 59.532 50.000 0.00 0.00 0.00 4.75
2381 6594 1.531578 GAAGAAAGGAACGTGTGAGCC 59.468 52.381 0.00 0.00 0.00 4.70
2382 6595 2.210116 TGAAGAAAGGAACGTGTGAGC 58.790 47.619 0.00 0.00 0.00 4.26
2383 6596 3.717707 TCTGAAGAAAGGAACGTGTGAG 58.282 45.455 0.00 0.00 0.00 3.51
2384 6597 3.812156 TCTGAAGAAAGGAACGTGTGA 57.188 42.857 0.00 0.00 0.00 3.58
2385 6598 3.364366 GCATCTGAAGAAAGGAACGTGTG 60.364 47.826 0.00 0.00 0.00 3.82
2386 6599 2.808543 GCATCTGAAGAAAGGAACGTGT 59.191 45.455 0.00 0.00 0.00 4.49
2387 6600 3.070018 AGCATCTGAAGAAAGGAACGTG 58.930 45.455 0.00 0.00 0.00 4.49
2388 6601 3.409026 AGCATCTGAAGAAAGGAACGT 57.591 42.857 0.00 0.00 0.00 3.99
2389 6602 3.748048 TGAAGCATCTGAAGAAAGGAACG 59.252 43.478 0.00 0.00 0.00 3.95
2412 6625 6.334202 AGAGCTACTAGTTCTGTTTATGCAC 58.666 40.000 0.00 0.00 34.38 4.57
2547 6763 1.631405 TCAGCATTTTGGTTGAGGGG 58.369 50.000 0.00 0.00 0.00 4.79
2550 6766 4.980434 CAGAGTTTCAGCATTTTGGTTGAG 59.020 41.667 0.00 0.00 29.56 3.02
2551 6767 4.202141 CCAGAGTTTCAGCATTTTGGTTGA 60.202 41.667 0.00 0.00 0.00 3.18
2630 6848 3.670055 CGTGGTTGATGAATTCTTGCAAC 59.330 43.478 20.47 20.47 38.40 4.17
2666 6884 2.093500 TCAGTTTCAGCGTGGCATCTAT 60.093 45.455 0.00 0.00 0.00 1.98
2690 6908 2.573340 GGCCAGCACCAAAATCCG 59.427 61.111 0.00 0.00 0.00 4.18
2741 6962 3.498397 ACTATCTGAAGCCAACACAAACG 59.502 43.478 0.00 0.00 0.00 3.60
2876 7146 9.326413 CGTCCAGAGTTTCCTTACATTATATTT 57.674 33.333 0.00 0.00 0.00 1.40
2901 7174 7.534085 TTTCATTTATACTGGTAGACTTGCG 57.466 36.000 0.00 0.00 0.00 4.85
2917 7190 7.162761 TCCAGGTTAGTCGTCATTTTCATTTA 58.837 34.615 0.00 0.00 0.00 1.40
2921 7194 4.610605 TCCAGGTTAGTCGTCATTTTCA 57.389 40.909 0.00 0.00 0.00 2.69
2929 7202 1.549170 AGCGAATTCCAGGTTAGTCGT 59.451 47.619 13.12 1.91 0.00 4.34
2931 7204 3.863041 AGAAGCGAATTCCAGGTTAGTC 58.137 45.455 0.00 0.00 38.84 2.59
2933 7206 6.927294 AATAAGAAGCGAATTCCAGGTTAG 57.073 37.500 0.00 0.00 38.84 2.34
2936 7209 4.399303 CCAAATAAGAAGCGAATTCCAGGT 59.601 41.667 0.00 0.00 38.84 4.00
2937 7210 4.640201 TCCAAATAAGAAGCGAATTCCAGG 59.360 41.667 0.00 0.00 38.84 4.45
2938 7211 5.818136 TCCAAATAAGAAGCGAATTCCAG 57.182 39.130 0.00 0.00 38.84 3.86
2940 7213 6.625873 AGATCCAAATAAGAAGCGAATTCC 57.374 37.500 0.00 0.00 38.84 3.01
2941 7214 7.645735 GGAAAGATCCAAATAAGAAGCGAATTC 59.354 37.037 0.00 0.00 45.79 2.17
2942 7215 7.484140 GGAAAGATCCAAATAAGAAGCGAATT 58.516 34.615 0.00 0.00 45.79 2.17
2958 7653 7.511959 AAAACAAACTAGTCAGGAAAGATCC 57.488 36.000 0.00 0.00 46.98 3.36
2967 7662 6.300354 ACATTCCGAAAACAAACTAGTCAG 57.700 37.500 0.00 0.00 0.00 3.51
2973 7668 8.865978 GTTTTTCTTACATTCCGAAAACAAACT 58.134 29.630 0.00 0.00 36.65 2.66
3006 7708 4.943705 TGACAAGTAATTTCAGATGGAGGC 59.056 41.667 0.00 0.00 0.00 4.70
3068 7833 8.637986 GTCAGAGAAATGGATGTATCTAGACTT 58.362 37.037 0.00 0.00 30.51 3.01
3069 7834 7.782168 TGTCAGAGAAATGGATGTATCTAGACT 59.218 37.037 0.00 0.00 32.57 3.24
3075 7840 6.586344 TCCTTGTCAGAGAAATGGATGTATC 58.414 40.000 0.00 0.00 0.00 2.24
3081 7846 5.412594 CGAAATTCCTTGTCAGAGAAATGGA 59.587 40.000 0.00 0.00 0.00 3.41
3084 7849 5.560724 TCCGAAATTCCTTGTCAGAGAAAT 58.439 37.500 0.00 0.00 0.00 2.17
3088 7853 3.624861 CCATCCGAAATTCCTTGTCAGAG 59.375 47.826 0.00 0.00 0.00 3.35
3089 7854 3.263170 TCCATCCGAAATTCCTTGTCAGA 59.737 43.478 0.00 0.00 0.00 3.27
3090 7855 3.609853 TCCATCCGAAATTCCTTGTCAG 58.390 45.455 0.00 0.00 0.00 3.51
3092 7857 2.945668 CCTCCATCCGAAATTCCTTGTC 59.054 50.000 0.00 0.00 0.00 3.18
3094 7859 2.092429 TCCCTCCATCCGAAATTCCTTG 60.092 50.000 0.00 0.00 0.00 3.61
3098 7863 4.040461 TGATACTCCCTCCATCCGAAATTC 59.960 45.833 0.00 0.00 0.00 2.17
3099 7864 3.973973 TGATACTCCCTCCATCCGAAATT 59.026 43.478 0.00 0.00 0.00 1.82
3100 7865 3.587498 TGATACTCCCTCCATCCGAAAT 58.413 45.455 0.00 0.00 0.00 2.17
3103 7868 2.767644 TTGATACTCCCTCCATCCGA 57.232 50.000 0.00 0.00 0.00 4.55
3104 7869 2.548920 GCTTTGATACTCCCTCCATCCG 60.549 54.545 0.00 0.00 0.00 4.18
3105 7870 2.224646 GGCTTTGATACTCCCTCCATCC 60.225 54.545 0.00 0.00 0.00 3.51
3106 7871 2.439507 TGGCTTTGATACTCCCTCCATC 59.560 50.000 0.00 0.00 0.00 3.51
3107 7872 2.492025 TGGCTTTGATACTCCCTCCAT 58.508 47.619 0.00 0.00 0.00 3.41
3108 7873 1.965414 TGGCTTTGATACTCCCTCCA 58.035 50.000 0.00 0.00 0.00 3.86
3109 7874 2.026262 TGTTGGCTTTGATACTCCCTCC 60.026 50.000 0.00 0.00 0.00 4.30
3110 7875 3.010420 GTGTTGGCTTTGATACTCCCTC 58.990 50.000 0.00 0.00 0.00 4.30
3111 7876 2.290960 GGTGTTGGCTTTGATACTCCCT 60.291 50.000 0.00 0.00 0.00 4.20
3112 7877 2.092323 GGTGTTGGCTTTGATACTCCC 58.908 52.381 0.00 0.00 0.00 4.30
3113 7878 2.749621 CTGGTGTTGGCTTTGATACTCC 59.250 50.000 0.00 0.00 0.00 3.85
3114 7879 3.674997 TCTGGTGTTGGCTTTGATACTC 58.325 45.455 0.00 0.00 0.00 2.59
3115 7880 3.788227 TCTGGTGTTGGCTTTGATACT 57.212 42.857 0.00 0.00 0.00 2.12
3116 7881 6.151144 AGTTTATCTGGTGTTGGCTTTGATAC 59.849 38.462 0.00 0.00 0.00 2.24
3121 7954 4.469657 TCAGTTTATCTGGTGTTGGCTTT 58.530 39.130 0.00 0.00 43.76 3.51
3122 7955 4.098914 TCAGTTTATCTGGTGTTGGCTT 57.901 40.909 0.00 0.00 43.76 4.35
3135 7968 5.011943 TGGCATGCTTTCCTTTTCAGTTTAT 59.988 36.000 18.92 0.00 0.00 1.40
3138 7971 2.699846 TGGCATGCTTTCCTTTTCAGTT 59.300 40.909 18.92 0.00 0.00 3.16
3139 7972 2.036346 GTGGCATGCTTTCCTTTTCAGT 59.964 45.455 18.92 0.00 0.00 3.41
3140 7973 2.611224 GGTGGCATGCTTTCCTTTTCAG 60.611 50.000 18.92 0.00 0.00 3.02
3147 7980 1.187567 AACTGGGTGGCATGCTTTCC 61.188 55.000 18.92 16.27 0.00 3.13
3148 7981 0.244721 GAACTGGGTGGCATGCTTTC 59.755 55.000 18.92 8.11 0.00 2.62
3199 8033 3.826157 TCAAGGCTCACTACAAATTTGGG 59.174 43.478 21.74 15.52 0.00 4.12
3211 8045 3.555518 GAACGTGATTTTCAAGGCTCAC 58.444 45.455 0.00 0.00 35.72 3.51
3215 8049 2.922335 GCTGGAACGTGATTTTCAAGGC 60.922 50.000 0.00 0.00 30.01 4.35
3229 8066 3.500680 TGTAATTTCCGAAGTGCTGGAAC 59.499 43.478 0.00 0.00 43.68 3.62
3235 8072 4.929808 TCTTCTCTGTAATTTCCGAAGTGC 59.070 41.667 0.00 0.00 32.10 4.40
3242 8082 9.010029 TGTGGTATTTTCTTCTCTGTAATTTCC 57.990 33.333 0.00 0.00 0.00 3.13
3257 8098 4.652822 AGAGGGACAAGTGTGGTATTTTC 58.347 43.478 0.00 0.00 0.00 2.29
3362 8219 2.356793 CGATGAGAGATGGCGGCC 60.357 66.667 13.32 13.32 0.00 6.13
3368 8225 1.301558 GCTGGGGCGATGAGAGATG 60.302 63.158 0.00 0.00 0.00 2.90
3434 8291 4.794648 TTCCGCCGCTCCATTGGG 62.795 66.667 2.09 0.00 0.00 4.12


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.