Multiple sequence alignment - TraesCS2A01G574300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G574300 chr2A 100.000 5112 0 0 1 5112 769345181 769340070 0.000000e+00 9441.0
1 TraesCS2A01G574300 chr2A 96.190 105 3 1 1 105 166370130 166370027 2.450000e-38 171.0
2 TraesCS2A01G574300 chr2A 96.117 103 3 1 1 103 534751306 534751205 3.170000e-37 167.0
3 TraesCS2A01G574300 chr2A 95.238 105 4 1 1 105 159943014 159943117 1.140000e-36 165.0
4 TraesCS2A01G574300 chr2A 95.238 105 4 1 1 105 751829387 751829284 1.140000e-36 165.0
5 TraesCS2A01G574300 chr2A 100.000 33 0 0 1499 1531 769343483 769343451 1.540000e-05 62.1
6 TraesCS2A01G574300 chr2A 100.000 33 0 0 1699 1731 769343683 769343651 1.540000e-05 62.1
7 TraesCS2A01G574300 chr2D 97.196 1819 33 10 1926 3742 644204501 644202699 0.000000e+00 3061.0
8 TraesCS2A01G574300 chr2D 94.910 1002 40 8 4116 5112 644191843 644190848 0.000000e+00 1557.0
9 TraesCS2A01G574300 chr2D 89.698 796 42 5 915 1706 644205109 644204350 0.000000e+00 979.0
10 TraesCS2A01G574300 chr2D 97.701 348 7 1 3728 4075 644192336 644191990 9.470000e-167 597.0
11 TraesCS2A01G574300 chr2D 84.375 224 30 5 4188 4408 33317910 33317689 1.110000e-51 215.0
12 TraesCS2A01G574300 chr7D 91.555 746 57 6 100 842 21709306 21710048 0.000000e+00 1024.0
13 TraesCS2A01G574300 chr7D 87.234 235 14 5 4188 4407 3761642 3761875 2.360000e-63 254.0
14 TraesCS2A01G574300 chr7D 89.947 189 15 4 4188 4373 163566644 163566457 1.840000e-59 241.0
15 TraesCS2A01G574300 chr7D 84.305 223 30 5 4188 4407 548207204 548206984 4.010000e-51 213.0
16 TraesCS2A01G574300 chr7D 95.000 60 0 3 4398 4454 565734212 565734153 1.960000e-14 91.6
17 TraesCS2A01G574300 chr7D 87.500 80 3 6 4375 4454 580965057 580964985 9.120000e-13 86.1
18 TraesCS2A01G574300 chr3B 89.383 810 84 2 100 909 772409586 772410393 0.000000e+00 1018.0
19 TraesCS2A01G574300 chr2B 89.737 799 77 5 112 909 207484413 207485207 0.000000e+00 1016.0
20 TraesCS2A01G574300 chr2B 87.683 820 87 13 100 913 12284414 12285225 0.000000e+00 942.0
21 TraesCS2A01G574300 chr1B 79.344 1554 222 57 2608 4100 665454146 665452631 0.000000e+00 1000.0
22 TraesCS2A01G574300 chr1B 90.358 363 27 7 4457 4817 415720234 415720590 2.150000e-128 470.0
23 TraesCS2A01G574300 chr1B 93.013 229 13 3 4781 5006 415720591 415720819 1.060000e-86 331.0
24 TraesCS2A01G574300 chr1B 94.805 77 3 1 5037 5112 415720813 415720889 8.990000e-23 119.0
25 TraesCS2A01G574300 chr7B 89.098 798 84 3 113 909 677353856 677354651 0.000000e+00 989.0
26 TraesCS2A01G574300 chr7B 91.460 363 24 4 4457 4817 745352717 745352360 4.600000e-135 492.0
27 TraesCS2A01G574300 chr7B 93.013 229 13 3 4781 5006 745352359 745352131 1.060000e-86 331.0
28 TraesCS2A01G574300 chr7B 90.476 189 14 4 4188 4373 475566220 475566033 3.950000e-61 246.0
29 TraesCS2A01G574300 chr7B 83.938 193 28 2 1733 1924 66475733 66475923 1.130000e-41 182.0
30 TraesCS2A01G574300 chr7B 96.104 77 2 1 5037 5112 745352137 745352061 1.930000e-24 124.0
31 TraesCS2A01G574300 chr7B 94.828 58 1 1 4399 4454 556906860 556906803 7.050000e-14 89.8
32 TraesCS2A01G574300 chr4B 88.575 814 84 8 100 912 91133529 91132724 0.000000e+00 979.0
33 TraesCS2A01G574300 chr4B 85.202 223 29 4 4188 4407 14624141 14623920 5.150000e-55 226.0
34 TraesCS2A01G574300 chr1D 78.672 1566 231 61 2608 4110 478255209 478253684 0.000000e+00 946.0
35 TraesCS2A01G574300 chr1D 88.288 222 23 3 4188 4407 355173658 355173438 3.930000e-66 263.0
36 TraesCS2A01G574300 chr1D 89.189 74 5 2 4383 4453 215395367 215395294 7.050000e-14 89.8
37 TraesCS2A01G574300 chr1A 78.521 1555 233 60 2608 4100 574482897 574481382 0.000000e+00 928.0
38 TraesCS2A01G574300 chr1A 95.238 105 4 1 1 105 352900942 352900839 1.140000e-36 165.0
39 TraesCS2A01G574300 chrUn 87.214 829 78 15 112 917 236404298 236405121 0.000000e+00 918.0
40 TraesCS2A01G574300 chrUn 91.703 229 12 6 4781 5006 475319702 475319478 1.380000e-80 311.0
41 TraesCS2A01G574300 chr3D 85.140 821 103 11 100 911 603532838 603533648 0.000000e+00 822.0
42 TraesCS2A01G574300 chr3D 93.013 229 13 3 4781 5006 380302371 380302143 1.060000e-86 331.0
43 TraesCS2A01G574300 chr3D 92.627 217 13 2 4603 4817 380302587 380302372 4.970000e-80 309.0
44 TraesCS2A01G574300 chr3D 77.824 239 32 12 4188 4408 69454324 69454559 1.490000e-25 128.0
45 TraesCS2A01G574300 chr3D 94.872 78 2 2 5037 5112 380302149 380302072 2.500000e-23 121.0
46 TraesCS2A01G574300 chr4A 82.609 828 114 26 100 909 475901629 475902444 0.000000e+00 704.0
47 TraesCS2A01G574300 chr4A 95.238 105 4 1 1 105 175358762 175358865 1.140000e-36 165.0
48 TraesCS2A01G574300 chr5D 93.013 229 13 3 4781 5006 534404257 534404029 1.060000e-86 331.0
49 TraesCS2A01G574300 chr5D 90.751 173 12 3 4648 4817 534404429 534404258 1.430000e-55 228.0
50 TraesCS2A01G574300 chr5D 96.104 77 2 1 5037 5112 534404035 534403959 1.930000e-24 124.0
51 TraesCS2A01G574300 chr5D 93.103 58 4 0 4398 4455 249406043 249405986 9.120000e-13 86.1
52 TraesCS2A01G574300 chr6D 86.364 220 26 4 4188 4404 303524287 303524505 2.380000e-58 237.0
53 TraesCS2A01G574300 chr6D 86.667 180 21 3 1747 1924 464591820 464591998 4.040000e-46 196.0
54 TraesCS2A01G574300 chr7A 85.644 202 26 3 1733 1932 660034653 660034853 5.190000e-50 209.0
55 TraesCS2A01G574300 chr7A 96.190 105 3 1 1 105 469752504 469752607 2.450000e-38 171.0
56 TraesCS2A01G574300 chr7A 95.238 105 4 1 1 105 248945776 248945879 1.140000e-36 165.0
57 TraesCS2A01G574300 chr7A 86.400 125 15 2 1802 1924 117605791 117605915 8.930000e-28 135.0
58 TraesCS2A01G574300 chr5B 87.283 173 21 1 1753 1924 548242160 548242332 4.040000e-46 196.0
59 TraesCS2A01G574300 chr6B 83.163 196 29 3 1733 1927 39152815 39152623 5.260000e-40 176.0
60 TraesCS2A01G574300 chr6B 92.063 63 1 3 4391 4450 447821498 447821559 9.120000e-13 86.1
61 TraesCS2A01G574300 chr3A 95.238 105 4 1 1 105 131436668 131436771 1.140000e-36 165.0
62 TraesCS2A01G574300 chr5A 81.768 181 26 6 1747 1924 18759067 18759243 1.480000e-30 145.0
63 TraesCS2A01G574300 chr4D 96.364 55 2 0 4400 4454 282656458 282656512 1.960000e-14 91.6
64 TraesCS2A01G574300 chr4D 90.625 64 4 2 4392 4454 345994873 345994935 3.280000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G574300 chr2A 769340070 769345181 5111 True 3188.400000 9441 100.000000 1 5112 3 chr2A.!!$R4 5111
1 TraesCS2A01G574300 chr2D 644202699 644205109 2410 True 2020.000000 3061 93.447000 915 3742 2 chr2D.!!$R3 2827
2 TraesCS2A01G574300 chr2D 644190848 644192336 1488 True 1077.000000 1557 96.305500 3728 5112 2 chr2D.!!$R2 1384
3 TraesCS2A01G574300 chr7D 21709306 21710048 742 False 1024.000000 1024 91.555000 100 842 1 chr7D.!!$F2 742
4 TraesCS2A01G574300 chr3B 772409586 772410393 807 False 1018.000000 1018 89.383000 100 909 1 chr3B.!!$F1 809
5 TraesCS2A01G574300 chr2B 207484413 207485207 794 False 1016.000000 1016 89.737000 112 909 1 chr2B.!!$F2 797
6 TraesCS2A01G574300 chr2B 12284414 12285225 811 False 942.000000 942 87.683000 100 913 1 chr2B.!!$F1 813
7 TraesCS2A01G574300 chr1B 665452631 665454146 1515 True 1000.000000 1000 79.344000 2608 4100 1 chr1B.!!$R1 1492
8 TraesCS2A01G574300 chr1B 415720234 415720889 655 False 306.666667 470 92.725333 4457 5112 3 chr1B.!!$F1 655
9 TraesCS2A01G574300 chr7B 677353856 677354651 795 False 989.000000 989 89.098000 113 909 1 chr7B.!!$F2 796
10 TraesCS2A01G574300 chr7B 745352061 745352717 656 True 315.666667 492 93.525667 4457 5112 3 chr7B.!!$R3 655
11 TraesCS2A01G574300 chr4B 91132724 91133529 805 True 979.000000 979 88.575000 100 912 1 chr4B.!!$R2 812
12 TraesCS2A01G574300 chr1D 478253684 478255209 1525 True 946.000000 946 78.672000 2608 4110 1 chr1D.!!$R3 1502
13 TraesCS2A01G574300 chr1A 574481382 574482897 1515 True 928.000000 928 78.521000 2608 4100 1 chr1A.!!$R2 1492
14 TraesCS2A01G574300 chrUn 236404298 236405121 823 False 918.000000 918 87.214000 112 917 1 chrUn.!!$F1 805
15 TraesCS2A01G574300 chr3D 603532838 603533648 810 False 822.000000 822 85.140000 100 911 1 chr3D.!!$F2 811
16 TraesCS2A01G574300 chr3D 380302072 380302587 515 True 253.666667 331 93.504000 4603 5112 3 chr3D.!!$R1 509
17 TraesCS2A01G574300 chr4A 475901629 475902444 815 False 704.000000 704 82.609000 100 909 1 chr4A.!!$F2 809

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
608 644 0.178903 TGGGAAGCTAGCGGGGATAT 60.179 55.0 9.55 0.0 0.00 1.63 F
1767 1823 0.034574 TGTGTGGTGCTGTCAGGTTT 60.035 50.0 1.14 0.0 0.00 3.27 F
1827 1883 0.033366 GGGTTTTCTGGCAATGCGTT 59.967 50.0 0.00 0.0 0.00 4.84 F
2910 2968 0.177836 AATGGCATCGTCACATCCGA 59.822 50.0 0.00 0.0 38.89 4.55 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1808 1864 0.033366 AACGCATTGCCAGAAAACCC 59.967 50.0 2.41 0.0 0.00 4.11 R
2912 2970 0.396811 AGGTAGCGGCAGTTTTCACT 59.603 50.0 1.45 0.0 0.00 3.41 R
2913 2971 0.517316 CAGGTAGCGGCAGTTTTCAC 59.483 55.0 1.45 0.0 0.00 3.18 R
4695 4921 0.695347 AGGAGAAGCCAAGTCAAGGG 59.305 55.0 0.00 0.0 40.02 3.95 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 7.735326 AATGTTAGATCCAGTTGTACCTACT 57.265 36.000 0.00 0.00 0.00 2.57
27 28 6.525578 TGTTAGATCCAGTTGTACCTACTG 57.474 41.667 14.96 14.96 42.06 2.74
28 29 5.105473 TGTTAGATCCAGTTGTACCTACTGC 60.105 44.000 16.00 6.51 41.28 4.40
29 30 3.714144 AGATCCAGTTGTACCTACTGCT 58.286 45.455 16.00 8.17 41.28 4.24
30 31 4.097418 AGATCCAGTTGTACCTACTGCTT 58.903 43.478 16.00 8.11 41.28 3.91
31 32 5.269991 AGATCCAGTTGTACCTACTGCTTA 58.730 41.667 16.00 7.32 41.28 3.09
32 33 5.900123 AGATCCAGTTGTACCTACTGCTTAT 59.100 40.000 16.00 10.56 41.28 1.73
33 34 6.384305 AGATCCAGTTGTACCTACTGCTTATT 59.616 38.462 16.00 3.14 41.28 1.40
34 35 6.368779 TCCAGTTGTACCTACTGCTTATTT 57.631 37.500 16.00 0.00 41.28 1.40
35 36 6.775708 TCCAGTTGTACCTACTGCTTATTTT 58.224 36.000 16.00 0.00 41.28 1.82
36 37 6.653320 TCCAGTTGTACCTACTGCTTATTTTG 59.347 38.462 16.00 4.53 41.28 2.44
37 38 6.653320 CCAGTTGTACCTACTGCTTATTTTGA 59.347 38.462 16.00 0.00 41.28 2.69
38 39 7.148407 CCAGTTGTACCTACTGCTTATTTTGAG 60.148 40.741 16.00 0.51 41.28 3.02
39 40 7.602644 CAGTTGTACCTACTGCTTATTTTGAGA 59.397 37.037 11.02 0.00 36.88 3.27
40 41 8.154856 AGTTGTACCTACTGCTTATTTTGAGAA 58.845 33.333 0.00 0.00 0.00 2.87
41 42 8.780249 GTTGTACCTACTGCTTATTTTGAGAAA 58.220 33.333 0.00 0.00 0.00 2.52
42 43 8.319143 TGTACCTACTGCTTATTTTGAGAAAC 57.681 34.615 0.00 0.00 0.00 2.78
43 44 6.819397 ACCTACTGCTTATTTTGAGAAACC 57.181 37.500 0.00 0.00 0.00 3.27
44 45 6.543735 ACCTACTGCTTATTTTGAGAAACCT 58.456 36.000 0.00 0.00 0.00 3.50
45 46 6.655425 ACCTACTGCTTATTTTGAGAAACCTC 59.345 38.462 0.00 0.00 0.00 3.85
46 47 6.655003 CCTACTGCTTATTTTGAGAAACCTCA 59.345 38.462 0.00 0.00 38.80 3.86
47 48 7.337942 CCTACTGCTTATTTTGAGAAACCTCAT 59.662 37.037 0.00 0.00 40.10 2.90
48 49 7.530426 ACTGCTTATTTTGAGAAACCTCATT 57.470 32.000 0.00 0.00 40.10 2.57
49 50 7.955918 ACTGCTTATTTTGAGAAACCTCATTT 58.044 30.769 0.00 0.00 40.10 2.32
50 51 8.424133 ACTGCTTATTTTGAGAAACCTCATTTT 58.576 29.630 0.00 0.00 40.10 1.82
51 52 8.816640 TGCTTATTTTGAGAAACCTCATTTTC 57.183 30.769 0.00 0.00 40.10 2.29
52 53 7.872483 TGCTTATTTTGAGAAACCTCATTTTCC 59.128 33.333 0.00 0.00 40.10 3.13
53 54 8.090831 GCTTATTTTGAGAAACCTCATTTTCCT 58.909 33.333 0.00 0.00 40.10 3.36
59 60 8.807948 TTGAGAAACCTCATTTTCCTATTAGG 57.192 34.615 3.07 3.07 40.10 2.69
60 61 8.158025 TGAGAAACCTCATTTTCCTATTAGGA 57.842 34.615 8.42 8.42 37.94 2.94
61 62 8.781951 TGAGAAACCTCATTTTCCTATTAGGAT 58.218 33.333 13.22 0.00 38.75 3.24
66 67 9.868160 AACCTCATTTTCCTATTAGGATAAAGG 57.132 33.333 20.91 20.91 45.34 3.11
67 68 9.237706 ACCTCATTTTCCTATTAGGATAAAGGA 57.762 33.333 25.35 22.90 45.34 3.36
83 84 9.920946 AGGATAAAGGAATATGCTAAAGTTTCA 57.079 29.630 0.00 0.00 32.86 2.69
88 89 8.409358 AAGGAATATGCTAAAGTTTCAACTGT 57.591 30.769 0.00 0.00 39.66 3.55
89 90 7.820648 AGGAATATGCTAAAGTTTCAACTGTG 58.179 34.615 0.00 0.00 39.66 3.66
90 91 7.029563 GGAATATGCTAAAGTTTCAACTGTGG 58.970 38.462 0.00 0.00 39.66 4.17
91 92 7.309194 GGAATATGCTAAAGTTTCAACTGTGGT 60.309 37.037 0.00 0.00 39.66 4.16
92 93 5.852282 ATGCTAAAGTTTCAACTGTGGTT 57.148 34.783 0.00 0.00 39.66 3.67
93 94 6.952773 ATGCTAAAGTTTCAACTGTGGTTA 57.047 33.333 0.00 0.00 39.66 2.85
94 95 6.761099 TGCTAAAGTTTCAACTGTGGTTAA 57.239 33.333 0.00 0.00 39.66 2.01
95 96 6.557110 TGCTAAAGTTTCAACTGTGGTTAAC 58.443 36.000 0.00 0.00 39.66 2.01
96 97 6.151312 TGCTAAAGTTTCAACTGTGGTTAACA 59.849 34.615 8.10 0.00 39.66 2.41
97 98 7.030768 GCTAAAGTTTCAACTGTGGTTAACAA 58.969 34.615 8.10 0.00 39.66 2.83
98 99 7.542824 GCTAAAGTTTCAACTGTGGTTAACAAA 59.457 33.333 8.10 0.00 39.66 2.83
104 105 4.947388 TCAACTGTGGTTAACAAAAGCTCT 59.053 37.500 8.10 0.00 38.67 4.09
167 172 3.142951 TGTACCAAAAGTCATTGTCGGG 58.857 45.455 0.00 0.00 0.00 5.14
204 210 2.159198 CCACACTTGCAGCAAAAAGTCT 60.159 45.455 9.65 0.00 34.41 3.24
239 245 1.279840 GTTGCAGCTTGGTCGTGAC 59.720 57.895 0.00 0.00 0.00 3.67
240 246 1.146041 TTGCAGCTTGGTCGTGACT 59.854 52.632 0.00 0.00 0.00 3.41
266 294 0.238817 GCAAAACGTGATGCCGGTTA 59.761 50.000 13.33 0.00 36.59 2.85
297 325 2.031508 GCGGCACTAGTTGTAGCAAAAA 60.032 45.455 5.41 0.00 32.29 1.94
458 489 0.248661 CCTCATCGTCTAGCGTGTGG 60.249 60.000 6.49 9.53 42.13 4.17
470 502 3.294493 GTGTGGCCGTGGTTGCAT 61.294 61.111 0.00 0.00 0.00 3.96
506 542 0.462759 GCTGCGCCTTGATAGTTCCT 60.463 55.000 4.18 0.00 0.00 3.36
514 550 4.518249 GCCTTGATAGTTCCTGTAGCTTT 58.482 43.478 0.00 0.00 0.00 3.51
608 644 0.178903 TGGGAAGCTAGCGGGGATAT 60.179 55.000 9.55 0.00 0.00 1.63
651 687 2.203070 GGCTCGCCGACCATGAAT 60.203 61.111 0.00 0.00 0.00 2.57
764 811 1.812922 CAGAGTCGTGATGGGCTGC 60.813 63.158 0.00 0.00 0.00 5.25
773 820 2.742856 CGTGATGGGCTGCAGATAGAAA 60.743 50.000 20.43 0.00 0.00 2.52
802 849 1.756538 GAAAAATCATGCGGGACCCAT 59.243 47.619 12.15 0.00 0.00 4.00
818 869 5.221925 GGGACCCATCATATACATGTGTCTT 60.222 44.000 9.11 0.00 33.57 3.01
850 902 1.082679 TTGTTTCCGTGTCGCGTGAA 61.083 50.000 5.77 5.46 39.32 3.18
856 908 2.964925 GTGTCGCGTGAACCAGCA 60.965 61.111 5.77 0.00 0.00 4.41
879 931 2.736995 CGCGAGTCCGGCTGAAAA 60.737 61.111 0.00 0.00 36.06 2.29
913 965 2.549329 ACCGGATCAAAACGTTTACCAC 59.451 45.455 15.03 6.79 0.00 4.16
938 990 8.795842 CCTATATATGAGAGGTCTAAGAACGT 57.204 38.462 0.00 0.00 31.22 3.99
997 1050 3.829311 TTCCCCAACCCCTCAGGCT 62.829 63.158 0.00 0.00 40.58 4.58
1004 1057 4.201122 CCCCTCAGGCTCCATGGC 62.201 72.222 6.96 0.00 42.15 4.40
1088 1144 0.240945 AAAAAGTGGCAGCGGATTCG 59.759 50.000 0.00 0.00 39.81 3.34
1228 1284 3.011119 CTCTCAGTAGAAGGTACGCACT 58.989 50.000 0.00 0.00 0.00 4.40
1238 1294 1.471684 AGGTACGCACTTAAGACGAGG 59.528 52.381 22.92 7.69 0.00 4.63
1239 1295 1.266466 GTACGCACTTAAGACGAGGC 58.734 55.000 22.92 11.68 0.00 4.70
1267 1323 7.198390 AGTTGGATATCGAATTGCTTGATTTG 58.802 34.615 3.32 0.00 0.00 2.32
1303 1359 4.215399 TGCAGCTAAGTCACAAATTACCAC 59.785 41.667 0.00 0.00 0.00 4.16
1332 1388 5.291128 GTGGACGAATATTTCTCATTCACGT 59.709 40.000 0.00 0.00 32.92 4.49
1384 1440 0.099968 TCCGTGTTCGATCGATGGAC 59.900 55.000 20.18 14.80 39.71 4.02
1466 1522 2.229543 TGAATGCAGCATTGTCTTGACC 59.770 45.455 25.66 8.64 33.90 4.02
1467 1523 1.913778 ATGCAGCATTGTCTTGACCA 58.086 45.000 0.52 0.00 0.00 4.02
1468 1524 0.953727 TGCAGCATTGTCTTGACCAC 59.046 50.000 0.00 0.00 0.00 4.16
1469 1525 0.110056 GCAGCATTGTCTTGACCACG 60.110 55.000 0.00 0.00 0.00 4.94
1470 1526 1.511850 CAGCATTGTCTTGACCACGA 58.488 50.000 0.00 0.00 0.00 4.35
1471 1527 1.195448 CAGCATTGTCTTGACCACGAC 59.805 52.381 0.00 0.36 0.00 4.34
1472 1528 1.202639 AGCATTGTCTTGACCACGACA 60.203 47.619 5.39 5.39 37.74 4.35
1473 1529 1.806542 GCATTGTCTTGACCACGACAT 59.193 47.619 9.61 0.00 38.98 3.06
1474 1530 2.159653 GCATTGTCTTGACCACGACATC 60.160 50.000 9.61 1.07 38.98 3.06
1475 1531 1.778334 TTGTCTTGACCACGACATCG 58.222 50.000 9.61 0.00 38.98 3.84
1476 1532 0.038618 TGTCTTGACCACGACATCGG 60.039 55.000 6.21 0.00 44.95 4.18
1477 1533 1.080093 TCTTGACCACGACATCGGC 60.080 57.895 6.21 0.00 44.95 5.54
1478 1534 2.431771 TTGACCACGACATCGGCG 60.432 61.111 0.00 0.00 44.95 6.46
1479 1535 2.812542 CTTGACCACGACATCGGCGA 62.813 60.000 13.87 13.87 44.95 5.54
1480 1536 2.126228 GACCACGACATCGGCGAA 60.126 61.111 15.93 0.00 44.95 4.70
1481 1537 1.518572 GACCACGACATCGGCGAAT 60.519 57.895 15.93 4.92 44.95 3.34
1482 1538 1.079405 ACCACGACATCGGCGAATT 60.079 52.632 15.93 2.83 44.95 2.17
1483 1539 1.348250 CCACGACATCGGCGAATTG 59.652 57.895 15.93 11.80 44.95 2.32
1484 1540 1.358725 CCACGACATCGGCGAATTGT 61.359 55.000 15.93 15.57 44.95 2.71
1485 1541 1.273688 CACGACATCGGCGAATTGTA 58.726 50.000 15.93 0.00 44.95 2.41
1486 1542 1.006391 CACGACATCGGCGAATTGTAC 60.006 52.381 15.93 8.14 44.95 2.90
1487 1543 0.226235 CGACATCGGCGAATTGTACG 59.774 55.000 15.93 15.58 35.37 3.67
1488 1544 1.274596 GACATCGGCGAATTGTACGT 58.725 50.000 15.93 2.42 0.00 3.57
1489 1545 1.657094 GACATCGGCGAATTGTACGTT 59.343 47.619 15.93 0.00 0.00 3.99
1490 1546 2.853594 GACATCGGCGAATTGTACGTTA 59.146 45.455 15.93 0.00 0.00 3.18
1491 1547 2.855963 ACATCGGCGAATTGTACGTTAG 59.144 45.455 15.93 0.00 0.00 2.34
1492 1548 1.270971 TCGGCGAATTGTACGTTAGC 58.729 50.000 7.35 7.17 0.00 3.09
1498 1554 3.362693 GCGAATTGTACGTTAGCTATGGC 60.363 47.826 0.00 0.00 39.06 4.40
1525 1581 3.637432 GTTTTTGTGATCCATGCGTGAA 58.363 40.909 7.72 0.00 0.00 3.18
1531 1587 1.001860 TGATCCATGCGTGAACAGTCA 59.998 47.619 7.72 1.39 0.00 3.41
1545 1601 2.981875 ACAGTCATTTTCGTTGTTCGC 58.018 42.857 0.00 0.00 39.67 4.70
1553 1609 3.984508 TTTCGTTGTTCGCCCAAATAA 57.015 38.095 0.00 0.00 39.67 1.40
1554 1610 3.984508 TTCGTTGTTCGCCCAAATAAA 57.015 38.095 0.00 0.00 39.67 1.40
1555 1611 3.546002 TCGTTGTTCGCCCAAATAAAG 57.454 42.857 0.00 0.00 39.67 1.85
1556 1612 2.879646 TCGTTGTTCGCCCAAATAAAGT 59.120 40.909 0.00 0.00 39.67 2.66
1557 1613 3.315749 TCGTTGTTCGCCCAAATAAAGTT 59.684 39.130 0.00 0.00 39.67 2.66
1558 1614 4.045783 CGTTGTTCGCCCAAATAAAGTTT 58.954 39.130 0.00 0.00 0.00 2.66
1559 1615 4.504826 CGTTGTTCGCCCAAATAAAGTTTT 59.495 37.500 0.00 0.00 0.00 2.43
1560 1616 5.555443 CGTTGTTCGCCCAAATAAAGTTTTG 60.555 40.000 0.00 0.00 36.55 2.44
1561 1617 3.804873 TGTTCGCCCAAATAAAGTTTTGC 59.195 39.130 0.00 0.00 35.67 3.68
1562 1618 3.735237 TCGCCCAAATAAAGTTTTGCA 57.265 38.095 0.00 0.00 35.67 4.08
1563 1619 3.648009 TCGCCCAAATAAAGTTTTGCAG 58.352 40.909 0.00 0.00 35.67 4.41
1564 1620 2.736192 CGCCCAAATAAAGTTTTGCAGG 59.264 45.455 0.00 0.00 35.67 4.85
1565 1621 3.738982 GCCCAAATAAAGTTTTGCAGGT 58.261 40.909 0.00 0.00 35.67 4.00
1566 1622 3.745975 GCCCAAATAAAGTTTTGCAGGTC 59.254 43.478 0.00 0.00 35.67 3.85
1567 1623 4.742138 GCCCAAATAAAGTTTTGCAGGTCA 60.742 41.667 0.00 0.00 35.67 4.02
1568 1624 5.363939 CCCAAATAAAGTTTTGCAGGTCAA 58.636 37.500 0.00 0.00 35.67 3.18
1569 1625 5.997129 CCCAAATAAAGTTTTGCAGGTCAAT 59.003 36.000 0.00 0.00 35.67 2.57
1570 1626 7.158021 CCCAAATAAAGTTTTGCAGGTCAATA 58.842 34.615 0.00 0.00 35.67 1.90
1571 1627 7.823799 CCCAAATAAAGTTTTGCAGGTCAATAT 59.176 33.333 0.00 0.00 35.67 1.28
1572 1628 9.868277 CCAAATAAAGTTTTGCAGGTCAATATA 57.132 29.630 0.00 0.00 35.67 0.86
1579 1635 9.855021 AAGTTTTGCAGGTCAATATATTACAAC 57.145 29.630 0.00 0.00 34.12 3.32
1580 1636 9.243105 AGTTTTGCAGGTCAATATATTACAACT 57.757 29.630 0.00 0.00 34.12 3.16
1581 1637 9.855021 GTTTTGCAGGTCAATATATTACAACTT 57.145 29.630 0.00 0.00 34.12 2.66
1583 1639 9.853555 TTTGCAGGTCAATATATTACAACTTTG 57.146 29.630 0.00 2.90 34.12 2.77
1584 1640 7.995289 TGCAGGTCAATATATTACAACTTTGG 58.005 34.615 0.00 0.00 0.00 3.28
1585 1641 7.613801 TGCAGGTCAATATATTACAACTTTGGT 59.386 33.333 0.00 0.00 0.00 3.67
1586 1642 7.915397 GCAGGTCAATATATTACAACTTTGGTG 59.085 37.037 0.00 0.00 0.00 4.17
1587 1643 8.956426 CAGGTCAATATATTACAACTTTGGTGT 58.044 33.333 0.00 0.00 0.00 4.16
1588 1644 9.528489 AGGTCAATATATTACAACTTTGGTGTT 57.472 29.630 0.00 0.00 0.00 3.32
1624 1680 8.697846 TTCTTTATACAAGATAGTGTTGGTCG 57.302 34.615 0.00 0.00 32.75 4.79
1625 1681 8.058667 TCTTTATACAAGATAGTGTTGGTCGA 57.941 34.615 0.00 0.00 32.75 4.20
1626 1682 8.692710 TCTTTATACAAGATAGTGTTGGTCGAT 58.307 33.333 0.00 0.00 32.75 3.59
1627 1683 9.314321 CTTTATACAAGATAGTGTTGGTCGATT 57.686 33.333 0.00 0.00 32.75 3.34
1628 1684 8.642908 TTATACAAGATAGTGTTGGTCGATTG 57.357 34.615 0.00 0.00 32.75 2.67
1629 1685 5.147330 ACAAGATAGTGTTGGTCGATTGA 57.853 39.130 0.00 0.00 0.00 2.57
1630 1686 5.171476 ACAAGATAGTGTTGGTCGATTGAG 58.829 41.667 0.00 0.00 0.00 3.02
1631 1687 5.171476 CAAGATAGTGTTGGTCGATTGAGT 58.829 41.667 0.00 0.00 0.00 3.41
1632 1688 4.748892 AGATAGTGTTGGTCGATTGAGTG 58.251 43.478 0.00 0.00 0.00 3.51
1633 1689 1.512926 AGTGTTGGTCGATTGAGTGC 58.487 50.000 0.00 0.00 0.00 4.40
1634 1690 1.070758 AGTGTTGGTCGATTGAGTGCT 59.929 47.619 0.00 0.00 0.00 4.40
1635 1691 1.195448 GTGTTGGTCGATTGAGTGCTG 59.805 52.381 0.00 0.00 0.00 4.41
1636 1692 1.069978 TGTTGGTCGATTGAGTGCTGA 59.930 47.619 0.00 0.00 0.00 4.26
1637 1693 2.143122 GTTGGTCGATTGAGTGCTGAA 58.857 47.619 0.00 0.00 0.00 3.02
1638 1694 2.744202 GTTGGTCGATTGAGTGCTGAAT 59.256 45.455 0.00 0.00 0.00 2.57
1639 1695 3.057969 TGGTCGATTGAGTGCTGAATT 57.942 42.857 0.00 0.00 0.00 2.17
1640 1696 3.411446 TGGTCGATTGAGTGCTGAATTT 58.589 40.909 0.00 0.00 0.00 1.82
1641 1697 3.820467 TGGTCGATTGAGTGCTGAATTTT 59.180 39.130 0.00 0.00 0.00 1.82
1642 1698 4.083324 TGGTCGATTGAGTGCTGAATTTTC 60.083 41.667 0.00 0.00 0.00 2.29
1643 1699 4.406943 GTCGATTGAGTGCTGAATTTTCC 58.593 43.478 0.00 0.00 0.00 3.13
1644 1700 4.154918 GTCGATTGAGTGCTGAATTTTCCT 59.845 41.667 0.00 0.00 0.00 3.36
1645 1701 4.761739 TCGATTGAGTGCTGAATTTTCCTT 59.238 37.500 0.00 0.00 0.00 3.36
1646 1702 4.855388 CGATTGAGTGCTGAATTTTCCTTG 59.145 41.667 0.00 0.00 0.00 3.61
1647 1703 5.335113 CGATTGAGTGCTGAATTTTCCTTGA 60.335 40.000 0.00 0.00 0.00 3.02
1648 1704 4.836125 TGAGTGCTGAATTTTCCTTGAC 57.164 40.909 0.00 0.00 0.00 3.18
1649 1705 3.569701 TGAGTGCTGAATTTTCCTTGACC 59.430 43.478 0.00 0.00 0.00 4.02
1650 1706 3.565307 AGTGCTGAATTTTCCTTGACCA 58.435 40.909 0.00 0.00 0.00 4.02
1651 1707 3.319122 AGTGCTGAATTTTCCTTGACCAC 59.681 43.478 0.00 0.00 0.00 4.16
1652 1708 2.293122 TGCTGAATTTTCCTTGACCACG 59.707 45.455 0.00 0.00 0.00 4.94
1653 1709 2.552315 GCTGAATTTTCCTTGACCACGA 59.448 45.455 0.00 0.00 0.00 4.35
1654 1710 3.191371 GCTGAATTTTCCTTGACCACGAT 59.809 43.478 0.00 0.00 0.00 3.73
1655 1711 4.394920 GCTGAATTTTCCTTGACCACGATA 59.605 41.667 0.00 0.00 0.00 2.92
1656 1712 5.066505 GCTGAATTTTCCTTGACCACGATAT 59.933 40.000 0.00 0.00 0.00 1.63
1657 1713 6.677781 TGAATTTTCCTTGACCACGATATC 57.322 37.500 0.00 0.00 0.00 1.63
1658 1714 5.293324 TGAATTTTCCTTGACCACGATATCG 59.707 40.000 23.18 23.18 46.33 2.92
1659 1715 2.218953 TTCCTTGACCACGATATCGC 57.781 50.000 24.59 9.13 44.43 4.58
1660 1716 1.399714 TCCTTGACCACGATATCGCT 58.600 50.000 24.59 9.49 44.43 4.93
1661 1717 1.067060 TCCTTGACCACGATATCGCTG 59.933 52.381 24.59 19.56 44.43 5.18
1662 1718 1.067060 CCTTGACCACGATATCGCTGA 59.933 52.381 24.59 2.10 44.43 4.26
1663 1719 2.481276 CCTTGACCACGATATCGCTGAA 60.481 50.000 24.59 9.66 44.43 3.02
1664 1720 3.384668 CTTGACCACGATATCGCTGAAT 58.615 45.455 24.59 12.72 44.43 2.57
1665 1721 3.452755 TGACCACGATATCGCTGAATT 57.547 42.857 24.59 1.13 44.43 2.17
1666 1722 3.123050 TGACCACGATATCGCTGAATTG 58.877 45.455 24.59 13.71 44.43 2.32
1667 1723 3.123804 GACCACGATATCGCTGAATTGT 58.876 45.455 24.59 13.72 44.43 2.71
1668 1724 4.202070 TGACCACGATATCGCTGAATTGTA 60.202 41.667 24.59 0.50 44.43 2.41
1669 1725 4.049186 ACCACGATATCGCTGAATTGTAC 58.951 43.478 24.59 0.00 44.43 2.90
1670 1726 3.119628 CCACGATATCGCTGAATTGTACG 59.880 47.826 24.59 0.00 44.43 3.67
1671 1727 3.729217 CACGATATCGCTGAATTGTACGT 59.271 43.478 24.59 0.00 44.43 3.57
1672 1728 4.206404 CACGATATCGCTGAATTGTACGTT 59.794 41.667 24.59 0.00 44.43 3.99
1673 1729 5.397240 CACGATATCGCTGAATTGTACGTTA 59.603 40.000 24.59 0.00 44.43 3.18
1674 1730 5.624081 ACGATATCGCTGAATTGTACGTTAG 59.376 40.000 24.59 0.00 44.43 2.34
1675 1731 5.441614 CGATATCGCTGAATTGTACGTTAGC 60.442 44.000 12.95 0.00 0.00 3.09
1676 1732 3.226346 TCGCTGAATTGTACGTTAGCT 57.774 42.857 0.00 0.00 0.00 3.32
1677 1733 4.359971 TCGCTGAATTGTACGTTAGCTA 57.640 40.909 0.00 0.00 0.00 3.32
1678 1734 4.928601 TCGCTGAATTGTACGTTAGCTAT 58.071 39.130 0.00 0.00 0.00 2.97
1679 1735 4.974275 TCGCTGAATTGTACGTTAGCTATC 59.026 41.667 0.00 0.00 0.00 2.08
1680 1736 4.143803 CGCTGAATTGTACGTTAGCTATCG 60.144 45.833 19.96 19.96 0.00 2.92
1681 1737 4.148348 GCTGAATTGTACGTTAGCTATCGG 59.852 45.833 23.99 8.91 0.00 4.18
1682 1738 4.046462 TGAATTGTACGTTAGCTATCGGC 58.954 43.478 23.99 17.31 42.19 5.54
1683 1739 3.720949 ATTGTACGTTAGCTATCGGCA 57.279 42.857 23.99 19.19 44.79 5.69
1684 1740 3.720949 TTGTACGTTAGCTATCGGCAT 57.279 42.857 23.99 9.41 44.79 4.40
1685 1741 3.278367 TGTACGTTAGCTATCGGCATC 57.722 47.619 23.99 13.25 44.79 3.91
1686 1742 2.030540 TGTACGTTAGCTATCGGCATCC 60.031 50.000 23.99 10.13 44.79 3.51
1698 1754 1.895051 CGGCATCCGTTTTTGTGATC 58.105 50.000 0.00 0.00 42.73 2.92
1699 1755 1.467374 CGGCATCCGTTTTTGTGATCC 60.467 52.381 0.00 0.00 42.73 3.36
1700 1756 1.543802 GGCATCCGTTTTTGTGATCCA 59.456 47.619 0.00 0.00 0.00 3.41
1701 1757 2.166254 GGCATCCGTTTTTGTGATCCAT 59.834 45.455 0.00 0.00 0.00 3.41
1702 1758 3.438360 GCATCCGTTTTTGTGATCCATC 58.562 45.455 0.00 0.00 0.00 3.51
1703 1759 3.734902 GCATCCGTTTTTGTGATCCATCC 60.735 47.826 0.00 0.00 0.00 3.51
1704 1760 2.080693 TCCGTTTTTGTGATCCATCCG 58.919 47.619 0.00 0.00 0.00 4.18
1705 1761 1.810151 CCGTTTTTGTGATCCATCCGT 59.190 47.619 0.00 0.00 0.00 4.69
1706 1762 2.227865 CCGTTTTTGTGATCCATCCGTT 59.772 45.455 0.00 0.00 0.00 4.44
1707 1763 3.305064 CCGTTTTTGTGATCCATCCGTTT 60.305 43.478 0.00 0.00 0.00 3.60
1708 1764 4.295051 CGTTTTTGTGATCCATCCGTTTT 58.705 39.130 0.00 0.00 0.00 2.43
1709 1765 4.742659 CGTTTTTGTGATCCATCCGTTTTT 59.257 37.500 0.00 0.00 0.00 1.94
1710 1766 5.332205 CGTTTTTGTGATCCATCCGTTTTTG 60.332 40.000 0.00 0.00 0.00 2.44
1711 1767 4.927978 TTTGTGATCCATCCGTTTTTGT 57.072 36.364 0.00 0.00 0.00 2.83
1712 1768 3.913548 TGTGATCCATCCGTTTTTGTG 57.086 42.857 0.00 0.00 0.00 3.33
1713 1769 3.481453 TGTGATCCATCCGTTTTTGTGA 58.519 40.909 0.00 0.00 0.00 3.58
1714 1770 4.078537 TGTGATCCATCCGTTTTTGTGAT 58.921 39.130 0.00 0.00 0.00 3.06
1715 1771 4.155826 TGTGATCCATCCGTTTTTGTGATC 59.844 41.667 0.00 0.00 0.00 2.92
1716 1772 3.694072 TGATCCATCCGTTTTTGTGATCC 59.306 43.478 0.00 0.00 0.00 3.36
1717 1773 3.147553 TCCATCCGTTTTTGTGATCCA 57.852 42.857 0.00 0.00 0.00 3.41
1718 1774 3.696045 TCCATCCGTTTTTGTGATCCAT 58.304 40.909 0.00 0.00 0.00 3.41
1719 1775 3.443329 TCCATCCGTTTTTGTGATCCATG 59.557 43.478 0.00 0.00 0.00 3.66
1720 1776 3.181397 CATCCGTTTTTGTGATCCATGC 58.819 45.455 0.00 0.00 0.00 4.06
1721 1777 1.198867 TCCGTTTTTGTGATCCATGCG 59.801 47.619 0.00 0.00 0.00 4.73
1722 1778 1.068610 CCGTTTTTGTGATCCATGCGT 60.069 47.619 0.00 0.00 0.00 5.24
1723 1779 1.978097 CGTTTTTGTGATCCATGCGTG 59.022 47.619 0.00 0.00 0.00 5.34
1724 1780 2.350293 CGTTTTTGTGATCCATGCGTGA 60.350 45.455 7.72 0.00 0.00 4.35
1725 1781 3.637432 GTTTTTGTGATCCATGCGTGAA 58.363 40.909 7.72 0.00 0.00 3.18
1726 1782 2.987413 TTTGTGATCCATGCGTGAAC 57.013 45.000 7.72 0.98 0.00 3.18
1727 1783 1.889545 TTGTGATCCATGCGTGAACA 58.110 45.000 7.72 3.68 0.00 3.18
1728 1784 1.441738 TGTGATCCATGCGTGAACAG 58.558 50.000 7.72 0.00 0.00 3.16
1729 1785 1.270785 TGTGATCCATGCGTGAACAGT 60.271 47.619 7.72 0.00 0.00 3.55
1730 1786 1.394917 GTGATCCATGCGTGAACAGTC 59.605 52.381 7.72 0.00 0.00 3.51
1731 1787 1.276138 TGATCCATGCGTGAACAGTCT 59.724 47.619 7.72 0.00 0.00 3.24
1732 1788 2.289631 TGATCCATGCGTGAACAGTCTT 60.290 45.455 7.72 0.00 0.00 3.01
1733 1789 1.511850 TCCATGCGTGAACAGTCTTG 58.488 50.000 7.72 0.00 0.00 3.02
1734 1790 1.202639 TCCATGCGTGAACAGTCTTGT 60.203 47.619 7.72 0.00 39.87 3.16
1735 1791 2.036604 TCCATGCGTGAACAGTCTTGTA 59.963 45.455 7.72 0.00 36.23 2.41
1736 1792 3.002791 CCATGCGTGAACAGTCTTGTAT 58.997 45.455 7.72 0.00 36.23 2.29
1737 1793 3.436704 CCATGCGTGAACAGTCTTGTATT 59.563 43.478 7.72 0.00 36.23 1.89
1738 1794 4.083324 CCATGCGTGAACAGTCTTGTATTT 60.083 41.667 7.72 0.00 36.23 1.40
1739 1795 5.451908 CATGCGTGAACAGTCTTGTATTTT 58.548 37.500 0.00 0.00 36.23 1.82
1740 1796 4.843147 TGCGTGAACAGTCTTGTATTTTG 58.157 39.130 0.00 0.00 36.23 2.44
1741 1797 3.664025 GCGTGAACAGTCTTGTATTTTGC 59.336 43.478 0.00 0.00 36.23 3.68
1742 1798 4.554723 GCGTGAACAGTCTTGTATTTTGCT 60.555 41.667 0.00 0.00 36.23 3.91
1743 1799 5.510671 CGTGAACAGTCTTGTATTTTGCTT 58.489 37.500 0.00 0.00 36.23 3.91
1744 1800 6.655062 CGTGAACAGTCTTGTATTTTGCTTA 58.345 36.000 0.00 0.00 36.23 3.09
1745 1801 6.792250 CGTGAACAGTCTTGTATTTTGCTTAG 59.208 38.462 0.00 0.00 36.23 2.18
1746 1802 7.307160 CGTGAACAGTCTTGTATTTTGCTTAGA 60.307 37.037 0.00 0.00 36.23 2.10
1747 1803 7.798982 GTGAACAGTCTTGTATTTTGCTTAGAC 59.201 37.037 0.00 0.00 36.23 2.59
1748 1804 7.715249 TGAACAGTCTTGTATTTTGCTTAGACT 59.285 33.333 0.00 0.00 42.08 3.24
1751 1807 7.426929 AGTCTTGTATTTTGCTTAGACTGTG 57.573 36.000 0.00 0.00 40.41 3.66
1752 1808 6.992715 AGTCTTGTATTTTGCTTAGACTGTGT 59.007 34.615 0.00 0.00 40.41 3.72
1753 1809 7.041780 AGTCTTGTATTTTGCTTAGACTGTGTG 60.042 37.037 0.00 0.00 40.41 3.82
1754 1810 5.940192 TGTATTTTGCTTAGACTGTGTGG 57.060 39.130 0.00 0.00 0.00 4.17
1755 1811 5.373222 TGTATTTTGCTTAGACTGTGTGGT 58.627 37.500 0.00 0.00 0.00 4.16
1756 1812 4.836125 ATTTTGCTTAGACTGTGTGGTG 57.164 40.909 0.00 0.00 0.00 4.17
1757 1813 1.593196 TTGCTTAGACTGTGTGGTGC 58.407 50.000 0.00 0.00 0.00 5.01
1758 1814 0.758734 TGCTTAGACTGTGTGGTGCT 59.241 50.000 0.00 0.00 0.00 4.40
1759 1815 1.151668 GCTTAGACTGTGTGGTGCTG 58.848 55.000 0.00 0.00 0.00 4.41
1760 1816 1.541233 GCTTAGACTGTGTGGTGCTGT 60.541 52.381 0.00 0.00 0.00 4.40
1761 1817 2.408050 CTTAGACTGTGTGGTGCTGTC 58.592 52.381 0.00 0.00 35.80 3.51
1762 1818 1.408969 TAGACTGTGTGGTGCTGTCA 58.591 50.000 0.00 0.00 37.30 3.58
1763 1819 0.105593 AGACTGTGTGGTGCTGTCAG 59.894 55.000 0.00 0.00 37.30 3.51
1764 1820 0.882042 GACTGTGTGGTGCTGTCAGG 60.882 60.000 1.14 0.00 35.69 3.86
1765 1821 1.146930 CTGTGTGGTGCTGTCAGGT 59.853 57.895 1.14 0.00 0.00 4.00
1766 1822 0.464373 CTGTGTGGTGCTGTCAGGTT 60.464 55.000 1.14 0.00 0.00 3.50
1767 1823 0.034574 TGTGTGGTGCTGTCAGGTTT 60.035 50.000 1.14 0.00 0.00 3.27
1768 1824 1.102978 GTGTGGTGCTGTCAGGTTTT 58.897 50.000 1.14 0.00 0.00 2.43
1769 1825 1.065551 GTGTGGTGCTGTCAGGTTTTC 59.934 52.381 1.14 0.00 0.00 2.29
1770 1826 0.307760 GTGGTGCTGTCAGGTTTTCG 59.692 55.000 1.14 0.00 0.00 3.46
1771 1827 0.107410 TGGTGCTGTCAGGTTTTCGT 60.107 50.000 1.14 0.00 0.00 3.85
1772 1828 0.586802 GGTGCTGTCAGGTTTTCGTC 59.413 55.000 1.14 0.00 0.00 4.20
1773 1829 0.586802 GTGCTGTCAGGTTTTCGTCC 59.413 55.000 1.14 0.00 0.00 4.79
1774 1830 0.179234 TGCTGTCAGGTTTTCGTCCA 59.821 50.000 1.14 0.00 0.00 4.02
1775 1831 1.305201 GCTGTCAGGTTTTCGTCCAA 58.695 50.000 1.14 0.00 0.00 3.53
1776 1832 1.880027 GCTGTCAGGTTTTCGTCCAAT 59.120 47.619 1.14 0.00 0.00 3.16
1777 1833 3.071479 GCTGTCAGGTTTTCGTCCAATA 58.929 45.455 1.14 0.00 0.00 1.90
1778 1834 3.500680 GCTGTCAGGTTTTCGTCCAATAA 59.499 43.478 1.14 0.00 0.00 1.40
1779 1835 4.156008 GCTGTCAGGTTTTCGTCCAATAAT 59.844 41.667 1.14 0.00 0.00 1.28
1780 1836 5.621197 TGTCAGGTTTTCGTCCAATAATG 57.379 39.130 0.00 0.00 0.00 1.90
1781 1837 4.083003 TGTCAGGTTTTCGTCCAATAATGC 60.083 41.667 0.00 0.00 0.00 3.56
1782 1838 4.156008 GTCAGGTTTTCGTCCAATAATGCT 59.844 41.667 0.00 0.00 0.00 3.79
1783 1839 4.394920 TCAGGTTTTCGTCCAATAATGCTC 59.605 41.667 0.00 0.00 0.00 4.26
1784 1840 3.374058 AGGTTTTCGTCCAATAATGCTCG 59.626 43.478 0.00 0.00 0.00 5.03
1785 1841 3.126343 GGTTTTCGTCCAATAATGCTCGT 59.874 43.478 0.00 0.00 0.00 4.18
1786 1842 4.379082 GGTTTTCGTCCAATAATGCTCGTT 60.379 41.667 0.00 0.00 0.00 3.85
1787 1843 5.151389 GTTTTCGTCCAATAATGCTCGTTT 58.849 37.500 0.00 0.00 0.00 3.60
1788 1844 4.593597 TTCGTCCAATAATGCTCGTTTC 57.406 40.909 0.00 0.00 0.00 2.78
1789 1845 3.591023 TCGTCCAATAATGCTCGTTTCA 58.409 40.909 0.00 0.00 0.00 2.69
1790 1846 3.997681 TCGTCCAATAATGCTCGTTTCAA 59.002 39.130 0.00 0.00 0.00 2.69
1791 1847 4.634004 TCGTCCAATAATGCTCGTTTCAAT 59.366 37.500 0.00 0.00 0.00 2.57
1792 1848 4.730042 CGTCCAATAATGCTCGTTTCAATG 59.270 41.667 0.00 0.00 0.00 2.82
1793 1849 5.036737 GTCCAATAATGCTCGTTTCAATGG 58.963 41.667 0.00 0.00 0.00 3.16
1794 1850 3.798337 CCAATAATGCTCGTTTCAATGGC 59.202 43.478 0.00 0.00 0.00 4.40
1795 1851 4.422840 CAATAATGCTCGTTTCAATGGCA 58.577 39.130 0.00 0.00 37.32 4.92
1796 1852 4.717233 ATAATGCTCGTTTCAATGGCAA 57.283 36.364 0.00 0.00 36.49 4.52
1797 1853 3.383620 AATGCTCGTTTCAATGGCAAA 57.616 38.095 0.00 0.00 36.49 3.68
1798 1854 2.132740 TGCTCGTTTCAATGGCAAAC 57.867 45.000 0.00 0.00 0.00 2.93
1811 1867 3.206246 CAAACGTGCACGGTGGGT 61.206 61.111 39.21 19.30 39.00 4.51
1812 1868 2.438795 AAACGTGCACGGTGGGTT 60.439 55.556 39.21 23.22 39.00 4.11
1813 1869 2.047443 AAACGTGCACGGTGGGTTT 61.047 52.632 39.21 27.14 39.00 3.27
1814 1870 1.596895 AAACGTGCACGGTGGGTTTT 61.597 50.000 39.21 26.47 39.00 2.43
1815 1871 1.995646 AACGTGCACGGTGGGTTTTC 61.996 55.000 39.21 0.00 44.95 2.29
1816 1872 2.184167 CGTGCACGGTGGGTTTTCT 61.184 57.895 31.15 0.00 35.37 2.52
1817 1873 1.358759 GTGCACGGTGGGTTTTCTG 59.641 57.895 10.60 0.00 0.00 3.02
1818 1874 1.826054 TGCACGGTGGGTTTTCTGG 60.826 57.895 10.60 0.00 0.00 3.86
1819 1875 3.039134 CACGGTGGGTTTTCTGGC 58.961 61.111 0.00 0.00 0.00 4.85
1820 1876 1.826054 CACGGTGGGTTTTCTGGCA 60.826 57.895 0.00 0.00 0.00 4.92
1821 1877 1.076632 ACGGTGGGTTTTCTGGCAA 60.077 52.632 0.00 0.00 0.00 4.52
1822 1878 0.469144 ACGGTGGGTTTTCTGGCAAT 60.469 50.000 0.00 0.00 0.00 3.56
1823 1879 0.038343 CGGTGGGTTTTCTGGCAATG 60.038 55.000 0.00 0.00 0.00 2.82
1824 1880 0.320683 GGTGGGTTTTCTGGCAATGC 60.321 55.000 0.00 0.00 0.00 3.56
1825 1881 0.667184 GTGGGTTTTCTGGCAATGCG 60.667 55.000 0.00 0.00 0.00 4.73
1826 1882 1.112315 TGGGTTTTCTGGCAATGCGT 61.112 50.000 0.00 0.00 0.00 5.24
1827 1883 0.033366 GGGTTTTCTGGCAATGCGTT 59.967 50.000 0.00 0.00 0.00 4.84
1828 1884 1.139163 GGTTTTCTGGCAATGCGTTG 58.861 50.000 14.54 14.54 38.39 4.10
1829 1885 1.139163 GTTTTCTGGCAATGCGTTGG 58.861 50.000 19.93 4.05 35.83 3.77
1830 1886 1.035923 TTTTCTGGCAATGCGTTGGA 58.964 45.000 19.93 6.41 35.83 3.53
1831 1887 0.313672 TTTCTGGCAATGCGTTGGAC 59.686 50.000 19.93 4.36 35.83 4.02
1832 1888 0.537143 TTCTGGCAATGCGTTGGACT 60.537 50.000 19.93 0.00 35.83 3.85
1833 1889 0.955428 TCTGGCAATGCGTTGGACTC 60.955 55.000 19.93 3.29 35.83 3.36
1834 1890 2.244436 CTGGCAATGCGTTGGACTCG 62.244 60.000 19.93 0.00 35.83 4.18
1835 1891 2.325082 GGCAATGCGTTGGACTCGT 61.325 57.895 19.93 0.00 35.83 4.18
1836 1892 1.574428 GCAATGCGTTGGACTCGTT 59.426 52.632 19.93 0.00 35.83 3.85
1837 1893 0.793861 GCAATGCGTTGGACTCGTTA 59.206 50.000 19.93 0.00 35.83 3.18
1838 1894 1.463528 GCAATGCGTTGGACTCGTTAC 60.464 52.381 19.93 0.00 35.83 2.50
1839 1895 1.127951 CAATGCGTTGGACTCGTTACC 59.872 52.381 11.00 0.00 0.00 2.85
1840 1896 0.390735 ATGCGTTGGACTCGTTACCC 60.391 55.000 0.00 0.00 0.00 3.69
1841 1897 1.291272 GCGTTGGACTCGTTACCCT 59.709 57.895 0.00 0.00 0.00 4.34
1842 1898 0.735287 GCGTTGGACTCGTTACCCTC 60.735 60.000 0.00 0.00 0.00 4.30
1843 1899 0.886563 CGTTGGACTCGTTACCCTCT 59.113 55.000 0.00 0.00 0.00 3.69
1844 1900 1.271656 CGTTGGACTCGTTACCCTCTT 59.728 52.381 0.00 0.00 0.00 2.85
1845 1901 2.288640 CGTTGGACTCGTTACCCTCTTT 60.289 50.000 0.00 0.00 0.00 2.52
1846 1902 3.736720 GTTGGACTCGTTACCCTCTTTT 58.263 45.455 0.00 0.00 0.00 2.27
1847 1903 3.672767 TGGACTCGTTACCCTCTTTTC 57.327 47.619 0.00 0.00 0.00 2.29
1848 1904 2.301009 TGGACTCGTTACCCTCTTTTCC 59.699 50.000 0.00 0.00 0.00 3.13
1849 1905 2.566279 GGACTCGTTACCCTCTTTTCCT 59.434 50.000 0.00 0.00 0.00 3.36
1850 1906 3.007723 GGACTCGTTACCCTCTTTTCCTT 59.992 47.826 0.00 0.00 0.00 3.36
1851 1907 4.244066 GACTCGTTACCCTCTTTTCCTTC 58.756 47.826 0.00 0.00 0.00 3.46
1852 1908 3.902467 ACTCGTTACCCTCTTTTCCTTCT 59.098 43.478 0.00 0.00 0.00 2.85
1853 1909 4.021280 ACTCGTTACCCTCTTTTCCTTCTC 60.021 45.833 0.00 0.00 0.00 2.87
1854 1910 3.260128 TCGTTACCCTCTTTTCCTTCTCC 59.740 47.826 0.00 0.00 0.00 3.71
1855 1911 3.619242 CGTTACCCTCTTTTCCTTCTCCC 60.619 52.174 0.00 0.00 0.00 4.30
1856 1912 2.442262 ACCCTCTTTTCCTTCTCCCT 57.558 50.000 0.00 0.00 0.00 4.20
1857 1913 1.988846 ACCCTCTTTTCCTTCTCCCTG 59.011 52.381 0.00 0.00 0.00 4.45
1858 1914 1.283321 CCCTCTTTTCCTTCTCCCTGG 59.717 57.143 0.00 0.00 0.00 4.45
1859 1915 1.988846 CCTCTTTTCCTTCTCCCTGGT 59.011 52.381 0.00 0.00 0.00 4.00
1860 1916 2.376855 CCTCTTTTCCTTCTCCCTGGTT 59.623 50.000 0.00 0.00 0.00 3.67
1861 1917 3.587506 CCTCTTTTCCTTCTCCCTGGTTA 59.412 47.826 0.00 0.00 0.00 2.85
1862 1918 4.228438 CCTCTTTTCCTTCTCCCTGGTTAT 59.772 45.833 0.00 0.00 0.00 1.89
1863 1919 5.179452 TCTTTTCCTTCTCCCTGGTTATG 57.821 43.478 0.00 0.00 0.00 1.90
1864 1920 4.601857 TCTTTTCCTTCTCCCTGGTTATGT 59.398 41.667 0.00 0.00 0.00 2.29
1865 1921 4.569719 TTTCCTTCTCCCTGGTTATGTC 57.430 45.455 0.00 0.00 0.00 3.06
1866 1922 2.478292 TCCTTCTCCCTGGTTATGTCC 58.522 52.381 0.00 0.00 0.00 4.02
1867 1923 1.139058 CCTTCTCCCTGGTTATGTCCG 59.861 57.143 0.00 0.00 0.00 4.79
1868 1924 1.139058 CTTCTCCCTGGTTATGTCCGG 59.861 57.143 0.00 0.00 0.00 5.14
1869 1925 0.337082 TCTCCCTGGTTATGTCCGGA 59.663 55.000 0.00 0.00 36.02 5.14
1870 1926 1.200519 CTCCCTGGTTATGTCCGGAA 58.799 55.000 5.23 0.00 36.02 4.30
1871 1927 0.906775 TCCCTGGTTATGTCCGGAAC 59.093 55.000 5.23 0.00 36.02 3.62
1872 1928 0.909623 CCCTGGTTATGTCCGGAACT 59.090 55.000 5.23 0.00 36.02 3.01
1873 1929 1.280998 CCCTGGTTATGTCCGGAACTT 59.719 52.381 5.23 1.58 36.02 2.66
1874 1930 2.290705 CCCTGGTTATGTCCGGAACTTT 60.291 50.000 5.23 0.00 36.02 2.66
1875 1931 2.747446 CCTGGTTATGTCCGGAACTTTG 59.253 50.000 5.23 0.00 36.02 2.77
1876 1932 3.408634 CTGGTTATGTCCGGAACTTTGT 58.591 45.455 5.23 0.00 36.02 2.83
1877 1933 4.563993 CCTGGTTATGTCCGGAACTTTGTA 60.564 45.833 5.23 0.00 36.02 2.41
1878 1934 5.168647 TGGTTATGTCCGGAACTTTGTAT 57.831 39.130 5.23 0.00 0.00 2.29
1879 1935 5.562635 TGGTTATGTCCGGAACTTTGTATT 58.437 37.500 5.23 0.00 0.00 1.89
1880 1936 6.005198 TGGTTATGTCCGGAACTTTGTATTT 58.995 36.000 5.23 0.00 0.00 1.40
1881 1937 6.149807 TGGTTATGTCCGGAACTTTGTATTTC 59.850 38.462 5.23 0.00 0.00 2.17
1882 1938 6.373495 GGTTATGTCCGGAACTTTGTATTTCT 59.627 38.462 5.23 0.00 0.00 2.52
1883 1939 5.880054 ATGTCCGGAACTTTGTATTTCTG 57.120 39.130 5.23 0.00 0.00 3.02
1884 1940 4.710324 TGTCCGGAACTTTGTATTTCTGT 58.290 39.130 5.23 0.00 0.00 3.41
1885 1941 5.127491 TGTCCGGAACTTTGTATTTCTGTT 58.873 37.500 5.23 0.00 0.00 3.16
1886 1942 5.591067 TGTCCGGAACTTTGTATTTCTGTTT 59.409 36.000 5.23 0.00 0.00 2.83
1887 1943 6.766944 TGTCCGGAACTTTGTATTTCTGTTTA 59.233 34.615 5.23 0.00 0.00 2.01
1888 1944 7.282675 TGTCCGGAACTTTGTATTTCTGTTTAA 59.717 33.333 5.23 0.00 0.00 1.52
1889 1945 8.294577 GTCCGGAACTTTGTATTTCTGTTTAAT 58.705 33.333 5.23 0.00 0.00 1.40
1890 1946 8.293867 TCCGGAACTTTGTATTTCTGTTTAATG 58.706 33.333 0.00 0.00 0.00 1.90
1891 1947 7.061789 CCGGAACTTTGTATTTCTGTTTAATGC 59.938 37.037 0.00 0.00 0.00 3.56
1892 1948 7.593273 CGGAACTTTGTATTTCTGTTTAATGCA 59.407 33.333 0.00 0.00 0.00 3.96
1893 1949 9.255304 GGAACTTTGTATTTCTGTTTAATGCAA 57.745 29.630 0.00 0.00 36.33 4.08
1898 1954 9.770097 TTTGTATTTCTGTTTAATGCAAATGGA 57.230 25.926 0.00 0.00 40.32 3.41
1899 1955 9.770097 TTGTATTTCTGTTTAATGCAAATGGAA 57.230 25.926 0.00 0.00 35.57 3.53
1900 1956 9.770097 TGTATTTCTGTTTAATGCAAATGGAAA 57.230 25.926 0.00 0.00 35.72 3.13
1902 1958 7.727331 TTTCTGTTTAATGCAAATGGAAAGG 57.273 32.000 0.00 0.00 31.75 3.11
1903 1959 5.792741 TCTGTTTAATGCAAATGGAAAGGG 58.207 37.500 0.00 0.00 0.00 3.95
1904 1960 4.904241 TGTTTAATGCAAATGGAAAGGGG 58.096 39.130 0.00 0.00 0.00 4.79
1905 1961 4.349342 TGTTTAATGCAAATGGAAAGGGGT 59.651 37.500 0.00 0.00 0.00 4.95
1906 1962 5.544176 TGTTTAATGCAAATGGAAAGGGGTA 59.456 36.000 0.00 0.00 0.00 3.69
1907 1963 6.214412 TGTTTAATGCAAATGGAAAGGGGTAT 59.786 34.615 0.00 0.00 0.00 2.73
1908 1964 4.758773 AATGCAAATGGAAAGGGGTATG 57.241 40.909 0.00 0.00 0.00 2.39
1909 1965 1.830477 TGCAAATGGAAAGGGGTATGC 59.170 47.619 0.00 0.00 0.00 3.14
1910 1966 1.138859 GCAAATGGAAAGGGGTATGCC 59.861 52.381 0.00 0.00 0.00 4.40
1911 1967 2.750814 CAAATGGAAAGGGGTATGCCT 58.249 47.619 0.00 0.00 34.45 4.75
1912 1968 2.431782 CAAATGGAAAGGGGTATGCCTG 59.568 50.000 0.00 0.00 34.45 4.85
1913 1969 0.557729 ATGGAAAGGGGTATGCCTGG 59.442 55.000 0.00 0.00 34.45 4.45
1914 1970 0.849094 TGGAAAGGGGTATGCCTGGT 60.849 55.000 0.00 0.00 34.45 4.00
1915 1971 0.395724 GGAAAGGGGTATGCCTGGTG 60.396 60.000 0.00 0.00 34.45 4.17
1916 1972 1.000359 AAAGGGGTATGCCTGGTGC 60.000 57.895 0.00 0.00 41.77 5.01
2002 2058 3.786635 AGATAGTGTTGGTCGATTGAGC 58.213 45.455 5.12 5.12 42.98 4.26
2037 2093 1.518352 CCACGACATCGCCGAATCA 60.518 57.895 0.14 0.00 44.43 2.57
2154 2210 8.746530 AGATCAACAATCTATTGCAACTTCAAT 58.253 29.630 0.00 0.00 43.17 2.57
2190 2246 7.687941 AAATTTATCTTGACCACGAGATTGT 57.312 32.000 0.00 0.00 42.66 2.71
2195 2251 2.309528 TGACCACGAGATTGTATGGC 57.690 50.000 0.00 0.00 35.49 4.40
2214 2270 0.239879 CCATCCGTTTTTGTGACCCG 59.760 55.000 0.00 0.00 0.00 5.28
2236 2293 5.570589 CCGTGCATGAAATTTCTTTCTTCTC 59.429 40.000 18.64 3.60 41.18 2.87
2239 2296 5.539574 TGCATGAAATTTCTTTCTTCTCCCA 59.460 36.000 18.64 0.00 41.18 4.37
2294 2351 4.342092 AGGCCAACAATATATTGCACCTTC 59.658 41.667 22.66 10.17 41.38 3.46
2489 2547 5.585500 TTGTCGTATGAGAAGAAAAACCG 57.415 39.130 0.00 0.00 0.00 4.44
2507 2565 5.913137 AACCGAAATTTAAGCATGGATCA 57.087 34.783 0.00 0.00 0.00 2.92
2520 2578 5.232463 AGCATGGATCACAACACAAAAATC 58.768 37.500 0.00 0.00 0.00 2.17
2552 2610 7.944000 TCTGGATAAGGGTGTGTACGTATTATA 59.056 37.037 0.00 0.00 0.00 0.98
2553 2611 8.476064 TGGATAAGGGTGTGTACGTATTATAA 57.524 34.615 0.00 0.00 0.00 0.98
2554 2612 9.092338 TGGATAAGGGTGTGTACGTATTATAAT 57.908 33.333 0.00 2.97 0.00 1.28
2561 2619 6.145048 GGTGTGTACGTATTATAATGGTGCTC 59.855 42.308 8.28 10.19 0.00 4.26
2656 2714 4.141228 TCTCTAGATGTACCTCCGTCCAAT 60.141 45.833 0.00 0.00 0.00 3.16
2906 2964 2.019249 CTGGAAATGGCATCGTCACAT 58.981 47.619 0.00 0.00 0.00 3.21
2908 2966 1.334869 GGAAATGGCATCGTCACATCC 59.665 52.381 0.00 0.00 0.00 3.51
2910 2968 0.177836 AATGGCATCGTCACATCCGA 59.822 50.000 0.00 0.00 38.89 4.55
2911 2969 0.530650 ATGGCATCGTCACATCCGAC 60.531 55.000 0.00 0.00 37.12 4.79
2912 2970 1.153647 GGCATCGTCACATCCGACA 60.154 57.895 0.00 0.00 37.12 4.35
2913 2971 1.148157 GGCATCGTCACATCCGACAG 61.148 60.000 0.00 0.00 37.12 3.51
2914 2972 0.458543 GCATCGTCACATCCGACAGT 60.459 55.000 0.00 0.00 37.12 3.55
3065 3132 0.320421 CTTCTGCGAACCTTTCCCGA 60.320 55.000 0.00 0.00 0.00 5.14
3070 3137 1.079336 CGAACCTTTCCCGAGGACC 60.079 63.158 0.00 0.00 39.25 4.46
3185 3252 0.459585 CATGCTCAAGGCCAATGTGC 60.460 55.000 21.77 21.77 40.92 4.57
3377 3450 4.005978 TCCCCGGGCTCTTCCTCA 62.006 66.667 17.73 0.00 34.39 3.86
3386 3460 1.773653 GGCTCTTCCTCATCCCATCTT 59.226 52.381 0.00 0.00 0.00 2.40
3639 3722 1.202428 GCTTCTCCCGTCCATACAGAC 60.202 57.143 0.00 0.00 0.00 3.51
3805 3909 0.457851 GCGAGATGTACCTGCTCAGT 59.542 55.000 0.00 0.00 0.00 3.41
3853 3957 0.320073 TTTCCACCTTCGGCTACGTG 60.320 55.000 0.00 0.00 41.85 4.49
4085 4201 1.681264 GGGGGATTAAGATTGCCAACG 59.319 52.381 0.00 0.00 0.00 4.10
4093 4209 2.642139 AGATTGCCAACGAAAGCATG 57.358 45.000 0.00 0.00 39.11 4.06
4094 4210 0.994263 GATTGCCAACGAAAGCATGC 59.006 50.000 10.51 10.51 39.11 4.06
4106 4222 3.204827 GCATGCAGCCACCGGTAG 61.205 66.667 14.21 0.00 37.23 3.18
4110 4226 1.622607 ATGCAGCCACCGGTAGCTTA 61.623 55.000 25.63 17.12 37.18 3.09
4111 4227 1.078708 GCAGCCACCGGTAGCTTAA 60.079 57.895 25.63 0.00 37.18 1.85
4114 4230 1.670811 CAGCCACCGGTAGCTTAAATG 59.329 52.381 25.63 10.77 37.18 2.32
4138 4360 4.155099 TGAGCATACTTCTCTATCGCTAGC 59.845 45.833 4.06 4.06 0.00 3.42
4174 4396 4.098960 CCGAGCCAGTGACCTAATAAGTTA 59.901 45.833 0.00 0.00 0.00 2.24
4272 4495 7.938140 TTTTCTCAGATTAACTACCAATGGG 57.062 36.000 3.55 0.00 41.29 4.00
4287 4511 0.469917 ATGGGTGGTCGGCTATTCAG 59.530 55.000 0.00 0.00 0.00 3.02
4294 4518 2.014857 GGTCGGCTATTCAGAAAACCC 58.985 52.381 0.00 0.00 0.00 4.11
4316 4540 7.293828 ACCCCAAATGACCATTGTTTAAAAAT 58.706 30.769 0.00 0.00 0.00 1.82
4363 4587 2.416547 CCGCACCTAAACAATCTGTCTG 59.583 50.000 0.00 0.00 0.00 3.51
4439 4663 0.731514 GCTGCTAACGCGACACTACA 60.732 55.000 15.93 1.82 39.65 2.74
4450 4674 2.094700 GCGACACTACAATCAGAGACCA 60.095 50.000 0.00 0.00 0.00 4.02
4454 4678 5.289675 CGACACTACAATCAGAGACCATTTC 59.710 44.000 0.00 0.00 0.00 2.17
4463 4687 2.359478 GACCATTTCCGCCCGTGT 60.359 61.111 0.00 0.00 0.00 4.49
4478 4702 1.433053 CGTGTGTTGCAACGGGAGAA 61.433 55.000 23.79 2.89 0.00 2.87
4479 4703 0.951558 GTGTGTTGCAACGGGAGAAT 59.048 50.000 23.79 0.00 0.00 2.40
4480 4704 2.147958 GTGTGTTGCAACGGGAGAATA 58.852 47.619 23.79 1.33 0.00 1.75
4481 4705 2.747446 GTGTGTTGCAACGGGAGAATAT 59.253 45.455 23.79 0.00 0.00 1.28
4517 4741 8.397957 TCATATGCCCAACCTAATAAATATGGT 58.602 33.333 0.00 0.00 30.98 3.55
4544 4768 1.077930 CCCTCCCTCAGCACACATG 60.078 63.158 0.00 0.00 0.00 3.21
4695 4921 2.167487 AGCCTCAAATCTCCGTTCTCTC 59.833 50.000 0.00 0.00 0.00 3.20
4701 4927 2.534042 ATCTCCGTTCTCTCCCTTGA 57.466 50.000 0.00 0.00 0.00 3.02
4735 4961 3.969976 CTCCATTCCTCCTCCTATTGACA 59.030 47.826 0.00 0.00 0.00 3.58
4778 5004 3.104512 TCACTCGTCCACCCTATTTGAT 58.895 45.455 0.00 0.00 0.00 2.57
4820 5083 3.286751 GGCAACGAAGCACAGGCA 61.287 61.111 6.23 0.00 44.61 4.75
4822 5085 2.639286 CAACGAAGCACAGGCACC 59.361 61.111 0.00 0.00 44.61 5.01
4823 5086 1.893808 CAACGAAGCACAGGCACCT 60.894 57.895 0.00 0.00 44.61 4.00
4826 5089 1.293498 CGAAGCACAGGCACCTAGT 59.707 57.895 0.00 0.00 44.61 2.57
5018 5283 3.260475 TGTTGCAGATATAACACCGCT 57.740 42.857 0.00 0.00 0.00 5.52
5023 5288 4.116961 TGCAGATATAACACCGCTGTTAC 58.883 43.478 5.48 0.00 44.03 2.50
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 9.435570 AGTAGGTACAACTGGATCTAACATTAT 57.564 33.333 0.00 0.00 0.00 1.28
1 2 8.692710 CAGTAGGTACAACTGGATCTAACATTA 58.307 37.037 16.14 0.00 40.56 1.90
2 3 7.556844 CAGTAGGTACAACTGGATCTAACATT 58.443 38.462 16.14 0.00 40.56 2.71
4 5 5.105473 GCAGTAGGTACAACTGGATCTAACA 60.105 44.000 22.10 0.00 43.71 2.41
5 6 5.127356 AGCAGTAGGTACAACTGGATCTAAC 59.873 44.000 22.10 9.15 43.71 2.34
6 7 5.269991 AGCAGTAGGTACAACTGGATCTAA 58.730 41.667 22.10 0.00 43.71 2.10
7 8 4.868268 AGCAGTAGGTACAACTGGATCTA 58.132 43.478 22.10 0.00 43.71 1.98
8 9 3.714144 AGCAGTAGGTACAACTGGATCT 58.286 45.455 22.10 12.27 43.71 2.75
9 10 4.473477 AAGCAGTAGGTACAACTGGATC 57.527 45.455 22.10 10.72 43.71 3.36
10 11 6.561519 AATAAGCAGTAGGTACAACTGGAT 57.438 37.500 22.10 6.08 43.71 3.41
11 12 6.368779 AAATAAGCAGTAGGTACAACTGGA 57.631 37.500 22.10 0.00 43.71 3.86
12 13 6.653320 TCAAAATAAGCAGTAGGTACAACTGG 59.347 38.462 22.10 9.68 43.71 4.00
13 14 7.602644 TCTCAAAATAAGCAGTAGGTACAACTG 59.397 37.037 18.51 18.51 45.80 3.16
14 15 7.676947 TCTCAAAATAAGCAGTAGGTACAACT 58.323 34.615 0.00 0.00 0.00 3.16
15 16 7.900782 TCTCAAAATAAGCAGTAGGTACAAC 57.099 36.000 0.00 0.00 0.00 3.32
16 17 8.780249 GTTTCTCAAAATAAGCAGTAGGTACAA 58.220 33.333 0.00 0.00 0.00 2.41
17 18 7.389607 GGTTTCTCAAAATAAGCAGTAGGTACA 59.610 37.037 0.00 0.00 0.00 2.90
18 19 7.606839 AGGTTTCTCAAAATAAGCAGTAGGTAC 59.393 37.037 0.00 0.00 0.00 3.34
19 20 7.686434 AGGTTTCTCAAAATAAGCAGTAGGTA 58.314 34.615 0.00 0.00 0.00 3.08
20 21 6.543735 AGGTTTCTCAAAATAAGCAGTAGGT 58.456 36.000 0.00 0.00 0.00 3.08
21 22 6.655003 TGAGGTTTCTCAAAATAAGCAGTAGG 59.345 38.462 0.00 0.00 46.08 3.18
22 23 7.672983 TGAGGTTTCTCAAAATAAGCAGTAG 57.327 36.000 0.00 0.00 46.08 2.57
33 34 9.243105 CCTAATAGGAAAATGAGGTTTCTCAAA 57.757 33.333 0.00 0.00 44.88 2.69
34 35 8.611257 TCCTAATAGGAAAATGAGGTTTCTCAA 58.389 33.333 6.54 0.00 46.21 3.02
35 36 8.158025 TCCTAATAGGAAAATGAGGTTTCTCA 57.842 34.615 6.54 0.00 46.69 3.27
57 58 9.920946 TGAAACTTTAGCATATTCCTTTATCCT 57.079 29.630 0.00 0.00 0.00 3.24
62 63 8.860088 ACAGTTGAAACTTTAGCATATTCCTTT 58.140 29.630 0.00 0.00 37.08 3.11
63 64 8.299570 CACAGTTGAAACTTTAGCATATTCCTT 58.700 33.333 0.00 0.00 37.08 3.36
64 65 7.094205 CCACAGTTGAAACTTTAGCATATTCCT 60.094 37.037 0.00 0.00 37.08 3.36
65 66 7.029563 CCACAGTTGAAACTTTAGCATATTCC 58.970 38.462 0.00 0.00 37.08 3.01
66 67 7.593825 ACCACAGTTGAAACTTTAGCATATTC 58.406 34.615 0.00 0.00 37.08 1.75
67 68 7.524717 ACCACAGTTGAAACTTTAGCATATT 57.475 32.000 0.00 0.00 37.08 1.28
68 69 7.524717 AACCACAGTTGAAACTTTAGCATAT 57.475 32.000 0.00 0.00 37.08 1.78
69 70 6.952773 AACCACAGTTGAAACTTTAGCATA 57.047 33.333 0.00 0.00 37.08 3.14
70 71 5.852282 AACCACAGTTGAAACTTTAGCAT 57.148 34.783 0.00 0.00 37.08 3.79
71 72 6.151312 TGTTAACCACAGTTGAAACTTTAGCA 59.849 34.615 2.48 0.00 37.08 3.49
72 73 6.557110 TGTTAACCACAGTTGAAACTTTAGC 58.443 36.000 2.48 0.00 37.08 3.09
73 74 8.973835 TTTGTTAACCACAGTTGAAACTTTAG 57.026 30.769 2.48 0.00 37.08 1.85
74 75 9.413048 CTTTTGTTAACCACAGTTGAAACTTTA 57.587 29.630 2.48 0.00 37.08 1.85
75 76 7.095397 GCTTTTGTTAACCACAGTTGAAACTTT 60.095 33.333 2.48 0.00 37.08 2.66
76 77 6.367695 GCTTTTGTTAACCACAGTTGAAACTT 59.632 34.615 2.48 0.00 37.08 2.66
77 78 5.867174 GCTTTTGTTAACCACAGTTGAAACT 59.133 36.000 2.48 0.00 40.60 2.66
78 79 5.867174 AGCTTTTGTTAACCACAGTTGAAAC 59.133 36.000 2.48 0.00 36.48 2.78
79 80 6.031751 AGCTTTTGTTAACCACAGTTGAAA 57.968 33.333 2.48 0.00 36.48 2.69
80 81 5.417580 AGAGCTTTTGTTAACCACAGTTGAA 59.582 36.000 2.48 0.00 36.48 2.69
81 82 4.947388 AGAGCTTTTGTTAACCACAGTTGA 59.053 37.500 2.48 0.00 36.48 3.18
82 83 5.248870 AGAGCTTTTGTTAACCACAGTTG 57.751 39.130 2.48 0.00 36.48 3.16
83 84 5.417580 TGAAGAGCTTTTGTTAACCACAGTT 59.582 36.000 2.48 0.00 36.48 3.16
84 85 4.947388 TGAAGAGCTTTTGTTAACCACAGT 59.053 37.500 2.48 0.00 36.48 3.55
85 86 5.499139 TGAAGAGCTTTTGTTAACCACAG 57.501 39.130 2.48 0.00 36.48 3.66
86 87 6.272318 CAATGAAGAGCTTTTGTTAACCACA 58.728 36.000 2.48 0.00 0.00 4.17
87 88 5.175673 GCAATGAAGAGCTTTTGTTAACCAC 59.824 40.000 2.48 0.00 0.00 4.16
88 89 5.163468 TGCAATGAAGAGCTTTTGTTAACCA 60.163 36.000 2.48 0.00 0.00 3.67
89 90 5.288804 TGCAATGAAGAGCTTTTGTTAACC 58.711 37.500 2.48 0.00 0.00 2.85
90 91 5.403466 CCTGCAATGAAGAGCTTTTGTTAAC 59.597 40.000 0.00 0.00 0.00 2.01
91 92 5.068987 ACCTGCAATGAAGAGCTTTTGTTAA 59.931 36.000 0.00 0.00 0.00 2.01
92 93 4.584325 ACCTGCAATGAAGAGCTTTTGTTA 59.416 37.500 0.00 0.00 0.00 2.41
93 94 3.385755 ACCTGCAATGAAGAGCTTTTGTT 59.614 39.130 0.00 0.00 0.00 2.83
94 95 2.961062 ACCTGCAATGAAGAGCTTTTGT 59.039 40.909 0.00 0.00 0.00 2.83
95 96 3.655276 ACCTGCAATGAAGAGCTTTTG 57.345 42.857 0.00 0.00 0.00 2.44
96 97 3.192212 GCTACCTGCAATGAAGAGCTTTT 59.808 43.478 0.00 0.00 42.31 2.27
97 98 2.751806 GCTACCTGCAATGAAGAGCTTT 59.248 45.455 0.00 0.00 42.31 3.51
98 99 2.363683 GCTACCTGCAATGAAGAGCTT 58.636 47.619 0.00 0.00 42.31 3.74
167 172 3.881089 AGTGTGGTAGGTTTTTGCTACAC 59.119 43.478 0.00 0.00 41.52 2.90
239 245 3.419915 GCATCACGTTTTGCTACATCAG 58.580 45.455 11.30 0.00 35.95 2.90
240 246 2.161410 GGCATCACGTTTTGCTACATCA 59.839 45.455 16.55 0.00 38.88 3.07
266 294 2.711542 ACTAGTGCCGCTTTTTGCTAT 58.288 42.857 0.00 0.00 40.11 2.97
279 307 3.603770 CGCATTTTTGCTACAACTAGTGC 59.396 43.478 0.00 0.00 0.00 4.40
281 309 4.377022 CGTCGCATTTTTGCTACAACTAGT 60.377 41.667 0.00 0.00 31.80 2.57
297 325 1.884464 CACATAGCCAGCGTCGCAT 60.884 57.895 21.09 0.00 0.00 4.73
404 433 7.445121 CACTGGTCCTAGCAAATCTAATATCA 58.555 38.462 0.00 0.00 0.00 2.15
458 489 2.431260 CAAGCATGCAACCACGGC 60.431 61.111 21.98 0.00 0.00 5.68
495 527 4.261801 GGCAAAGCTACAGGAACTATCAA 58.738 43.478 0.00 0.00 36.02 2.57
528 564 4.077184 CGCCCAACTACGGCTCCA 62.077 66.667 0.00 0.00 44.73 3.86
555 591 2.300152 TCTGCAACTTTCGGATCTCAGT 59.700 45.455 0.00 0.00 0.00 3.41
608 644 1.570501 CCCATCCTCCTTCCCAATTCA 59.429 52.381 0.00 0.00 0.00 2.57
643 679 1.153086 GCCGCCTCTCATTCATGGT 60.153 57.895 0.00 0.00 0.00 3.55
773 820 4.996758 CCCGCATGATTTTTCCTTCTTTTT 59.003 37.500 0.00 0.00 0.00 1.94
787 834 1.361204 TATGATGGGTCCCGCATGAT 58.639 50.000 20.81 10.27 37.16 2.45
802 849 2.794350 CGCGCAAGACACATGTATATGA 59.206 45.455 8.75 0.00 43.02 2.15
874 926 1.466950 GGTGCATCGGTCGAATTTTCA 59.533 47.619 0.00 0.00 0.00 2.69
879 931 2.202878 CCGGTGCATCGGTCGAAT 60.203 61.111 30.46 0.00 44.60 3.34
913 965 8.795842 ACGTTCTTAGACCTCTCATATATAGG 57.204 38.462 0.00 0.00 36.42 2.57
962 1014 3.454812 GGGGAAGCTATTGTTCAGACCTA 59.545 47.826 0.00 0.00 0.00 3.08
1004 1057 2.951745 GCTCGACGTCCATGCTCG 60.952 66.667 10.58 0.00 0.00 5.03
1011 1064 2.430244 TTGCTTCGCTCGACGTCC 60.430 61.111 10.58 0.00 44.19 4.79
1068 1124 1.729149 CGAATCCGCTGCCACTTTTTC 60.729 52.381 0.00 0.00 0.00 2.29
1088 1144 1.897615 GCCCTCCTCATGCTGCATC 60.898 63.158 13.10 0.00 0.00 3.91
1228 1284 6.569801 CGATATCCAACTATGCCTCGTCTTAA 60.570 42.308 0.00 0.00 0.00 1.85
1238 1294 5.869753 AGCAATTCGATATCCAACTATGC 57.130 39.130 8.37 8.37 0.00 3.14
1239 1295 7.425577 TCAAGCAATTCGATATCCAACTATG 57.574 36.000 0.00 0.00 0.00 2.23
1267 1323 1.080974 GCTGCATGCACAGGACAAC 60.081 57.895 18.46 0.00 42.31 3.32
1303 1359 0.580104 GAAATATTCGTCCACCGCCG 59.420 55.000 0.00 0.00 36.19 6.46
1346 1402 5.985526 CGGAAAATTAAGCCGTAAAACAG 57.014 39.130 0.00 0.00 40.17 3.16
1431 1487 2.363680 TGCATTCAAACAACCGACCATT 59.636 40.909 0.00 0.00 0.00 3.16
1433 1489 1.336440 CTGCATTCAAACAACCGACCA 59.664 47.619 0.00 0.00 0.00 4.02
1466 1522 1.006391 GTACAATTCGCCGATGTCGTG 60.006 52.381 0.00 0.00 37.74 4.35
1467 1523 1.274596 GTACAATTCGCCGATGTCGT 58.725 50.000 0.00 0.00 37.74 4.34
1468 1524 0.226235 CGTACAATTCGCCGATGTCG 59.774 55.000 0.00 0.00 39.44 4.35
1469 1525 1.274596 ACGTACAATTCGCCGATGTC 58.725 50.000 0.00 0.00 0.00 3.06
1470 1526 1.717194 AACGTACAATTCGCCGATGT 58.283 45.000 0.00 0.00 0.00 3.06
1471 1527 2.347292 GCTAACGTACAATTCGCCGATG 60.347 50.000 0.00 0.00 0.00 3.84
1472 1528 1.856597 GCTAACGTACAATTCGCCGAT 59.143 47.619 0.00 0.00 0.00 4.18
1473 1529 1.135315 AGCTAACGTACAATTCGCCGA 60.135 47.619 0.00 0.00 0.00 5.54
1474 1530 1.274596 AGCTAACGTACAATTCGCCG 58.725 50.000 0.00 0.00 0.00 6.46
1475 1531 3.183775 CCATAGCTAACGTACAATTCGCC 59.816 47.826 0.00 0.00 0.00 5.54
1476 1532 3.362693 GCCATAGCTAACGTACAATTCGC 60.363 47.826 0.00 0.00 35.50 4.70
1477 1533 3.183775 GGCCATAGCTAACGTACAATTCG 59.816 47.826 0.00 0.00 39.73 3.34
1478 1534 4.124238 TGGCCATAGCTAACGTACAATTC 58.876 43.478 0.00 0.00 39.73 2.17
1479 1535 4.145365 TGGCCATAGCTAACGTACAATT 57.855 40.909 0.00 0.00 39.73 2.32
1480 1536 3.830744 TGGCCATAGCTAACGTACAAT 57.169 42.857 0.00 0.00 39.73 2.71
1481 1537 3.493699 GGATGGCCATAGCTAACGTACAA 60.494 47.826 20.84 0.00 39.73 2.41
1482 1538 2.036733 GGATGGCCATAGCTAACGTACA 59.963 50.000 20.84 0.00 39.73 2.90
1483 1539 2.685100 GGATGGCCATAGCTAACGTAC 58.315 52.381 20.84 1.18 39.73 3.67
1484 1540 1.271379 CGGATGGCCATAGCTAACGTA 59.729 52.381 20.84 0.00 39.73 3.57
1485 1541 0.033504 CGGATGGCCATAGCTAACGT 59.966 55.000 20.84 0.00 39.73 3.99
1486 1542 0.033504 ACGGATGGCCATAGCTAACG 59.966 55.000 20.84 17.67 38.97 3.18
1487 1543 2.256117 AACGGATGGCCATAGCTAAC 57.744 50.000 20.84 4.54 39.73 2.34
1488 1544 3.290948 AAAACGGATGGCCATAGCTAA 57.709 42.857 20.84 0.00 39.73 3.09
1489 1545 2.948979 CAAAAACGGATGGCCATAGCTA 59.051 45.455 20.84 0.00 39.73 3.32
1490 1546 1.750778 CAAAAACGGATGGCCATAGCT 59.249 47.619 20.84 4.34 39.73 3.32
1491 1547 1.476488 ACAAAAACGGATGGCCATAGC 59.524 47.619 20.84 7.11 38.76 2.97
1492 1548 2.752354 TCACAAAAACGGATGGCCATAG 59.248 45.455 20.84 18.29 0.00 2.23
1498 1554 3.772932 CATGGATCACAAAAACGGATGG 58.227 45.455 0.00 0.00 0.00 3.51
1525 1581 2.286772 GGCGAACAACGAAAATGACTGT 60.287 45.455 0.00 0.00 45.77 3.55
1531 1587 2.873133 TTTGGGCGAACAACGAAAAT 57.127 40.000 0.00 0.00 45.77 1.82
1545 1601 4.954875 TGACCTGCAAAACTTTATTTGGG 58.045 39.130 2.39 0.00 39.99 4.12
1553 1609 9.855021 GTTGTAATATATTGACCTGCAAAACTT 57.145 29.630 8.28 0.00 40.48 2.66
1554 1610 9.243105 AGTTGTAATATATTGACCTGCAAAACT 57.757 29.630 8.28 0.80 40.48 2.66
1555 1611 9.855021 AAGTTGTAATATATTGACCTGCAAAAC 57.145 29.630 8.28 0.00 40.48 2.43
1557 1613 9.853555 CAAAGTTGTAATATATTGACCTGCAAA 57.146 29.630 8.28 0.00 40.48 3.68
1558 1614 8.465999 CCAAAGTTGTAATATATTGACCTGCAA 58.534 33.333 8.28 0.00 41.53 4.08
1559 1615 7.613801 ACCAAAGTTGTAATATATTGACCTGCA 59.386 33.333 8.28 0.00 0.00 4.41
1560 1616 7.915397 CACCAAAGTTGTAATATATTGACCTGC 59.085 37.037 8.28 0.00 0.00 4.85
1561 1617 8.956426 ACACCAAAGTTGTAATATATTGACCTG 58.044 33.333 8.28 5.23 0.00 4.00
1562 1618 9.528489 AACACCAAAGTTGTAATATATTGACCT 57.472 29.630 8.28 0.00 0.00 3.85
1598 1654 9.314321 CGACCAACACTATCTTGTATAAAGAAT 57.686 33.333 0.00 0.00 0.00 2.40
1599 1655 8.525316 TCGACCAACACTATCTTGTATAAAGAA 58.475 33.333 0.00 0.00 0.00 2.52
1600 1656 8.058667 TCGACCAACACTATCTTGTATAAAGA 57.941 34.615 0.00 0.00 0.00 2.52
1601 1657 8.873215 ATCGACCAACACTATCTTGTATAAAG 57.127 34.615 0.00 0.00 0.00 1.85
1602 1658 9.093970 CAATCGACCAACACTATCTTGTATAAA 57.906 33.333 0.00 0.00 0.00 1.40
1603 1659 8.471609 TCAATCGACCAACACTATCTTGTATAA 58.528 33.333 0.00 0.00 0.00 0.98
1604 1660 8.002984 TCAATCGACCAACACTATCTTGTATA 57.997 34.615 0.00 0.00 0.00 1.47
1605 1661 6.873997 TCAATCGACCAACACTATCTTGTAT 58.126 36.000 0.00 0.00 0.00 2.29
1606 1662 6.071560 ACTCAATCGACCAACACTATCTTGTA 60.072 38.462 0.00 0.00 0.00 2.41
1607 1663 5.147330 TCAATCGACCAACACTATCTTGT 57.853 39.130 0.00 0.00 0.00 3.16
1608 1664 5.062683 CACTCAATCGACCAACACTATCTTG 59.937 44.000 0.00 0.00 0.00 3.02
1609 1665 5.171476 CACTCAATCGACCAACACTATCTT 58.829 41.667 0.00 0.00 0.00 2.40
1610 1666 4.748892 CACTCAATCGACCAACACTATCT 58.251 43.478 0.00 0.00 0.00 1.98
1611 1667 3.307242 GCACTCAATCGACCAACACTATC 59.693 47.826 0.00 0.00 0.00 2.08
1612 1668 3.055819 AGCACTCAATCGACCAACACTAT 60.056 43.478 0.00 0.00 0.00 2.12
1613 1669 2.299013 AGCACTCAATCGACCAACACTA 59.701 45.455 0.00 0.00 0.00 2.74
1614 1670 1.070758 AGCACTCAATCGACCAACACT 59.929 47.619 0.00 0.00 0.00 3.55
1615 1671 1.195448 CAGCACTCAATCGACCAACAC 59.805 52.381 0.00 0.00 0.00 3.32
1616 1672 1.069978 TCAGCACTCAATCGACCAACA 59.930 47.619 0.00 0.00 0.00 3.33
1617 1673 1.795768 TCAGCACTCAATCGACCAAC 58.204 50.000 0.00 0.00 0.00 3.77
1618 1674 2.542020 TTCAGCACTCAATCGACCAA 57.458 45.000 0.00 0.00 0.00 3.67
1619 1675 2.768253 ATTCAGCACTCAATCGACCA 57.232 45.000 0.00 0.00 0.00 4.02
1620 1676 4.406943 GAAAATTCAGCACTCAATCGACC 58.593 43.478 0.00 0.00 0.00 4.79
1621 1677 4.154918 AGGAAAATTCAGCACTCAATCGAC 59.845 41.667 0.00 0.00 0.00 4.20
1622 1678 4.326826 AGGAAAATTCAGCACTCAATCGA 58.673 39.130 0.00 0.00 0.00 3.59
1623 1679 4.691860 AGGAAAATTCAGCACTCAATCG 57.308 40.909 0.00 0.00 0.00 3.34
1624 1680 5.860716 GTCAAGGAAAATTCAGCACTCAATC 59.139 40.000 0.00 0.00 0.00 2.67
1625 1681 5.279156 GGTCAAGGAAAATTCAGCACTCAAT 60.279 40.000 0.00 0.00 0.00 2.57
1626 1682 4.037923 GGTCAAGGAAAATTCAGCACTCAA 59.962 41.667 0.00 0.00 0.00 3.02
1627 1683 3.569701 GGTCAAGGAAAATTCAGCACTCA 59.430 43.478 0.00 0.00 0.00 3.41
1628 1684 3.569701 TGGTCAAGGAAAATTCAGCACTC 59.430 43.478 0.00 0.00 0.00 3.51
1629 1685 3.319122 GTGGTCAAGGAAAATTCAGCACT 59.681 43.478 6.39 0.00 30.19 4.40
1630 1686 3.642705 GTGGTCAAGGAAAATTCAGCAC 58.357 45.455 0.00 0.00 0.00 4.40
1631 1687 2.293122 CGTGGTCAAGGAAAATTCAGCA 59.707 45.455 0.00 0.00 0.00 4.41
1632 1688 2.552315 TCGTGGTCAAGGAAAATTCAGC 59.448 45.455 0.00 0.00 0.00 4.26
1633 1689 6.510157 CGATATCGTGGTCAAGGAAAATTCAG 60.510 42.308 17.06 0.00 34.11 3.02
1634 1690 5.293324 CGATATCGTGGTCAAGGAAAATTCA 59.707 40.000 17.06 0.00 34.11 2.57
1635 1691 5.738370 CGATATCGTGGTCAAGGAAAATTC 58.262 41.667 17.06 0.00 34.11 2.17
1636 1692 4.035208 GCGATATCGTGGTCAAGGAAAATT 59.965 41.667 24.99 0.00 42.22 1.82
1637 1693 3.560068 GCGATATCGTGGTCAAGGAAAAT 59.440 43.478 24.99 0.00 42.22 1.82
1638 1694 2.933906 GCGATATCGTGGTCAAGGAAAA 59.066 45.455 24.99 0.00 42.22 2.29
1639 1695 2.167693 AGCGATATCGTGGTCAAGGAAA 59.832 45.455 24.99 0.00 42.22 3.13
1640 1696 1.754803 AGCGATATCGTGGTCAAGGAA 59.245 47.619 24.99 0.00 42.22 3.36
1641 1697 1.067060 CAGCGATATCGTGGTCAAGGA 59.933 52.381 24.99 0.00 42.22 3.36
1642 1698 1.067060 TCAGCGATATCGTGGTCAAGG 59.933 52.381 24.99 7.37 42.22 3.61
1643 1699 2.492019 TCAGCGATATCGTGGTCAAG 57.508 50.000 24.99 8.61 42.22 3.02
1644 1700 2.951457 TTCAGCGATATCGTGGTCAA 57.049 45.000 24.99 9.41 42.22 3.18
1645 1701 3.123050 CAATTCAGCGATATCGTGGTCA 58.877 45.455 24.99 7.65 42.22 4.02
1646 1702 3.123804 ACAATTCAGCGATATCGTGGTC 58.876 45.455 24.99 9.44 42.22 4.02
1647 1703 3.179443 ACAATTCAGCGATATCGTGGT 57.821 42.857 24.99 6.91 42.22 4.16
1648 1704 3.119628 CGTACAATTCAGCGATATCGTGG 59.880 47.826 24.99 17.27 42.22 4.94
1649 1705 3.729217 ACGTACAATTCAGCGATATCGTG 59.271 43.478 24.99 20.21 42.22 4.35
1650 1706 3.961182 ACGTACAATTCAGCGATATCGT 58.039 40.909 24.99 10.26 42.22 3.73
1651 1707 4.948864 AACGTACAATTCAGCGATATCG 57.051 40.909 20.79 20.79 43.27 2.92
1652 1708 5.629849 AGCTAACGTACAATTCAGCGATATC 59.370 40.000 0.00 0.00 34.26 1.63
1653 1709 5.529791 AGCTAACGTACAATTCAGCGATAT 58.470 37.500 0.00 0.00 34.26 1.63
1654 1710 4.928601 AGCTAACGTACAATTCAGCGATA 58.071 39.130 0.00 0.00 34.26 2.92
1655 1711 3.782046 AGCTAACGTACAATTCAGCGAT 58.218 40.909 0.00 0.00 34.26 4.58
1656 1712 3.226346 AGCTAACGTACAATTCAGCGA 57.774 42.857 0.00 0.00 34.26 4.93
1657 1713 4.143803 CGATAGCTAACGTACAATTCAGCG 60.144 45.833 14.64 0.00 34.26 5.18
1658 1714 4.148348 CCGATAGCTAACGTACAATTCAGC 59.852 45.833 20.19 0.00 0.00 4.26
1659 1715 4.148348 GCCGATAGCTAACGTACAATTCAG 59.852 45.833 20.19 4.76 38.99 3.02
1660 1716 4.046462 GCCGATAGCTAACGTACAATTCA 58.954 43.478 20.19 0.00 38.99 2.57
1661 1717 4.046462 TGCCGATAGCTAACGTACAATTC 58.954 43.478 20.19 0.00 44.23 2.17
1662 1718 4.049546 TGCCGATAGCTAACGTACAATT 57.950 40.909 20.19 0.00 44.23 2.32
1663 1719 3.720949 TGCCGATAGCTAACGTACAAT 57.279 42.857 20.19 0.00 44.23 2.71
1664 1720 3.551454 GGATGCCGATAGCTAACGTACAA 60.551 47.826 20.19 5.14 44.23 2.41
1665 1721 2.030540 GGATGCCGATAGCTAACGTACA 60.031 50.000 20.19 17.58 44.23 2.90
1666 1722 2.593257 GGATGCCGATAGCTAACGTAC 58.407 52.381 20.19 13.10 44.23 3.67
1668 1724 3.888093 GGATGCCGATAGCTAACGT 57.112 52.632 20.19 3.87 44.23 3.99
1680 1736 1.543802 TGGATCACAAAAACGGATGCC 59.456 47.619 0.00 0.00 0.00 4.40
1681 1737 3.438360 GATGGATCACAAAAACGGATGC 58.562 45.455 0.00 0.00 0.00 3.91
1682 1738 3.487376 CGGATGGATCACAAAAACGGATG 60.487 47.826 0.00 0.00 0.00 3.51
1683 1739 2.682856 CGGATGGATCACAAAAACGGAT 59.317 45.455 0.00 0.00 0.00 4.18
1684 1740 2.080693 CGGATGGATCACAAAAACGGA 58.919 47.619 0.00 0.00 0.00 4.69
1685 1741 1.810151 ACGGATGGATCACAAAAACGG 59.190 47.619 0.00 0.00 0.00 4.44
1686 1742 3.552604 AACGGATGGATCACAAAAACG 57.447 42.857 0.00 0.00 0.00 3.60
1687 1743 5.522097 ACAAAAACGGATGGATCACAAAAAC 59.478 36.000 0.00 0.00 0.00 2.43
1688 1744 5.521735 CACAAAAACGGATGGATCACAAAAA 59.478 36.000 0.00 0.00 0.00 1.94
1689 1745 5.046529 CACAAAAACGGATGGATCACAAAA 58.953 37.500 0.00 0.00 0.00 2.44
1690 1746 4.339530 TCACAAAAACGGATGGATCACAAA 59.660 37.500 0.00 0.00 0.00 2.83
1691 1747 3.885901 TCACAAAAACGGATGGATCACAA 59.114 39.130 0.00 0.00 0.00 3.33
1692 1748 3.481453 TCACAAAAACGGATGGATCACA 58.519 40.909 0.00 0.00 0.00 3.58
1693 1749 4.438744 GGATCACAAAAACGGATGGATCAC 60.439 45.833 0.00 0.00 33.20 3.06
1694 1750 3.694072 GGATCACAAAAACGGATGGATCA 59.306 43.478 0.00 0.00 33.20 2.92
1695 1751 3.694072 TGGATCACAAAAACGGATGGATC 59.306 43.478 0.00 0.00 0.00 3.36
1696 1752 3.696045 TGGATCACAAAAACGGATGGAT 58.304 40.909 0.00 0.00 0.00 3.41
1697 1753 3.147553 TGGATCACAAAAACGGATGGA 57.852 42.857 0.00 0.00 0.00 3.41
1698 1754 3.772932 CATGGATCACAAAAACGGATGG 58.227 45.455 0.00 0.00 0.00 3.51
1699 1755 3.181397 GCATGGATCACAAAAACGGATG 58.819 45.455 0.00 0.00 0.00 3.51
1700 1756 2.159393 CGCATGGATCACAAAAACGGAT 60.159 45.455 0.00 0.00 0.00 4.18
1701 1757 1.198867 CGCATGGATCACAAAAACGGA 59.801 47.619 0.00 0.00 0.00 4.69
1702 1758 1.068610 ACGCATGGATCACAAAAACGG 60.069 47.619 0.00 0.00 0.00 4.44
1703 1759 1.978097 CACGCATGGATCACAAAAACG 59.022 47.619 0.00 0.00 0.00 3.60
1704 1760 3.281341 TCACGCATGGATCACAAAAAC 57.719 42.857 0.00 0.00 0.00 2.43
1705 1761 3.067320 TGTTCACGCATGGATCACAAAAA 59.933 39.130 0.00 0.00 0.00 1.94
1706 1762 2.620585 TGTTCACGCATGGATCACAAAA 59.379 40.909 0.00 0.00 0.00 2.44
1707 1763 2.225467 TGTTCACGCATGGATCACAAA 58.775 42.857 0.00 0.00 0.00 2.83
1708 1764 1.805943 CTGTTCACGCATGGATCACAA 59.194 47.619 0.00 0.00 0.00 3.33
1709 1765 1.270785 ACTGTTCACGCATGGATCACA 60.271 47.619 0.00 0.00 0.00 3.58
1710 1766 1.394917 GACTGTTCACGCATGGATCAC 59.605 52.381 0.00 0.00 0.00 3.06
1711 1767 1.276138 AGACTGTTCACGCATGGATCA 59.724 47.619 0.00 0.00 0.00 2.92
1712 1768 2.015736 AGACTGTTCACGCATGGATC 57.984 50.000 0.00 0.00 0.00 3.36
1713 1769 2.079158 CAAGACTGTTCACGCATGGAT 58.921 47.619 0.00 0.00 0.00 3.41
1714 1770 1.202639 ACAAGACTGTTCACGCATGGA 60.203 47.619 0.00 0.00 28.57 3.41
1715 1771 1.229428 ACAAGACTGTTCACGCATGG 58.771 50.000 0.00 0.00 28.57 3.66
1716 1772 4.668576 AATACAAGACTGTTCACGCATG 57.331 40.909 0.00 0.00 36.96 4.06
1717 1773 5.451908 CAAAATACAAGACTGTTCACGCAT 58.548 37.500 0.00 0.00 36.96 4.73
1718 1774 4.788201 GCAAAATACAAGACTGTTCACGCA 60.788 41.667 0.00 0.00 36.96 5.24
1719 1775 3.664025 GCAAAATACAAGACTGTTCACGC 59.336 43.478 0.00 0.00 36.96 5.34
1720 1776 5.095691 AGCAAAATACAAGACTGTTCACG 57.904 39.130 0.00 0.00 36.96 4.35
1721 1777 7.798982 GTCTAAGCAAAATACAAGACTGTTCAC 59.201 37.037 0.00 0.00 36.96 3.18
1722 1778 7.715249 AGTCTAAGCAAAATACAAGACTGTTCA 59.285 33.333 2.21 0.00 41.48 3.18
1723 1779 8.089115 AGTCTAAGCAAAATACAAGACTGTTC 57.911 34.615 2.21 0.00 41.48 3.18
1727 1783 6.992715 ACACAGTCTAAGCAAAATACAAGACT 59.007 34.615 0.00 0.00 43.26 3.24
1728 1784 7.072030 CACACAGTCTAAGCAAAATACAAGAC 58.928 38.462 0.00 0.00 34.85 3.01
1729 1785 6.204688 CCACACAGTCTAAGCAAAATACAAGA 59.795 38.462 0.00 0.00 0.00 3.02
1730 1786 6.017109 ACCACACAGTCTAAGCAAAATACAAG 60.017 38.462 0.00 0.00 0.00 3.16
1731 1787 5.825679 ACCACACAGTCTAAGCAAAATACAA 59.174 36.000 0.00 0.00 0.00 2.41
1732 1788 5.238432 CACCACACAGTCTAAGCAAAATACA 59.762 40.000 0.00 0.00 0.00 2.29
1733 1789 5.689819 CACCACACAGTCTAAGCAAAATAC 58.310 41.667 0.00 0.00 0.00 1.89
1734 1790 4.215399 GCACCACACAGTCTAAGCAAAATA 59.785 41.667 0.00 0.00 0.00 1.40
1735 1791 3.004734 GCACCACACAGTCTAAGCAAAAT 59.995 43.478 0.00 0.00 0.00 1.82
1736 1792 2.357637 GCACCACACAGTCTAAGCAAAA 59.642 45.455 0.00 0.00 0.00 2.44
1737 1793 1.946768 GCACCACACAGTCTAAGCAAA 59.053 47.619 0.00 0.00 0.00 3.68
1738 1794 1.140852 AGCACCACACAGTCTAAGCAA 59.859 47.619 0.00 0.00 0.00 3.91
1739 1795 0.758734 AGCACCACACAGTCTAAGCA 59.241 50.000 0.00 0.00 0.00 3.91
1740 1796 1.151668 CAGCACCACACAGTCTAAGC 58.848 55.000 0.00 0.00 0.00 3.09
1741 1797 2.224042 TGACAGCACCACACAGTCTAAG 60.224 50.000 0.00 0.00 0.00 2.18
1742 1798 1.760029 TGACAGCACCACACAGTCTAA 59.240 47.619 0.00 0.00 0.00 2.10
1743 1799 1.341209 CTGACAGCACCACACAGTCTA 59.659 52.381 0.00 0.00 0.00 2.59
1744 1800 0.105593 CTGACAGCACCACACAGTCT 59.894 55.000 0.00 0.00 0.00 3.24
1745 1801 0.882042 CCTGACAGCACCACACAGTC 60.882 60.000 0.00 0.00 0.00 3.51
1746 1802 1.146930 CCTGACAGCACCACACAGT 59.853 57.895 0.00 0.00 0.00 3.55
1747 1803 0.464373 AACCTGACAGCACCACACAG 60.464 55.000 0.00 0.00 0.00 3.66
1748 1804 0.034574 AAACCTGACAGCACCACACA 60.035 50.000 0.00 0.00 0.00 3.72
1749 1805 1.065551 GAAAACCTGACAGCACCACAC 59.934 52.381 0.00 0.00 0.00 3.82
1750 1806 1.388547 GAAAACCTGACAGCACCACA 58.611 50.000 0.00 0.00 0.00 4.17
1751 1807 0.307760 CGAAAACCTGACAGCACCAC 59.692 55.000 0.00 0.00 0.00 4.16
1752 1808 0.107410 ACGAAAACCTGACAGCACCA 60.107 50.000 0.00 0.00 0.00 4.17
1753 1809 0.586802 GACGAAAACCTGACAGCACC 59.413 55.000 0.00 0.00 0.00 5.01
1754 1810 0.586802 GGACGAAAACCTGACAGCAC 59.413 55.000 0.00 0.00 0.00 4.40
1755 1811 0.179234 TGGACGAAAACCTGACAGCA 59.821 50.000 0.00 0.00 0.00 4.41
1756 1812 1.305201 TTGGACGAAAACCTGACAGC 58.695 50.000 0.00 0.00 0.00 4.40
1757 1813 5.631026 CATTATTGGACGAAAACCTGACAG 58.369 41.667 0.00 0.00 0.00 3.51
1758 1814 4.083003 GCATTATTGGACGAAAACCTGACA 60.083 41.667 0.00 0.00 0.00 3.58
1759 1815 4.156008 AGCATTATTGGACGAAAACCTGAC 59.844 41.667 0.00 0.00 0.00 3.51
1760 1816 4.331968 AGCATTATTGGACGAAAACCTGA 58.668 39.130 0.00 0.00 0.00 3.86
1761 1817 4.662145 GAGCATTATTGGACGAAAACCTG 58.338 43.478 0.00 0.00 0.00 4.00
1762 1818 3.374058 CGAGCATTATTGGACGAAAACCT 59.626 43.478 0.00 0.00 0.00 3.50
1763 1819 3.126343 ACGAGCATTATTGGACGAAAACC 59.874 43.478 0.00 0.00 0.00 3.27
1764 1820 4.336532 ACGAGCATTATTGGACGAAAAC 57.663 40.909 0.00 0.00 0.00 2.43
1765 1821 5.049336 TGAAACGAGCATTATTGGACGAAAA 60.049 36.000 0.00 0.00 0.00 2.29
1766 1822 4.452795 TGAAACGAGCATTATTGGACGAAA 59.547 37.500 0.00 0.00 0.00 3.46
1767 1823 3.997681 TGAAACGAGCATTATTGGACGAA 59.002 39.130 0.00 0.00 0.00 3.85
1768 1824 3.591023 TGAAACGAGCATTATTGGACGA 58.409 40.909 0.00 0.00 0.00 4.20
1769 1825 4.335082 TTGAAACGAGCATTATTGGACG 57.665 40.909 0.00 0.00 0.00 4.79
1770 1826 5.036737 CCATTGAAACGAGCATTATTGGAC 58.963 41.667 0.00 0.00 0.00 4.02
1771 1827 4.439974 GCCATTGAAACGAGCATTATTGGA 60.440 41.667 0.00 0.00 0.00 3.53
1772 1828 3.798337 GCCATTGAAACGAGCATTATTGG 59.202 43.478 0.00 0.00 0.00 3.16
1773 1829 4.422840 TGCCATTGAAACGAGCATTATTG 58.577 39.130 0.00 0.00 0.00 1.90
1774 1830 4.717233 TGCCATTGAAACGAGCATTATT 57.283 36.364 0.00 0.00 0.00 1.40
1775 1831 4.717233 TTGCCATTGAAACGAGCATTAT 57.283 36.364 0.00 0.00 32.67 1.28
1776 1832 4.233789 GTTTGCCATTGAAACGAGCATTA 58.766 39.130 0.00 0.00 32.67 1.90
1777 1833 3.059166 GTTTGCCATTGAAACGAGCATT 58.941 40.909 0.00 0.00 32.67 3.56
1778 1834 2.676076 GTTTGCCATTGAAACGAGCAT 58.324 42.857 0.00 0.00 32.67 3.79
1779 1835 2.132740 GTTTGCCATTGAAACGAGCA 57.867 45.000 0.00 0.00 0.00 4.26
1794 1850 2.272918 AAACCCACCGTGCACGTTTG 62.273 55.000 34.81 28.90 37.74 2.93
1795 1851 1.596895 AAAACCCACCGTGCACGTTT 61.597 50.000 34.81 24.96 37.74 3.60
1796 1852 1.995646 GAAAACCCACCGTGCACGTT 61.996 55.000 34.81 21.94 37.74 3.99
1797 1853 2.438795 AAAACCCACCGTGCACGT 60.439 55.556 34.81 21.36 37.74 4.49
1798 1854 2.184167 AGAAAACCCACCGTGCACG 61.184 57.895 31.77 31.77 39.44 5.34
1799 1855 1.358759 CAGAAAACCCACCGTGCAC 59.641 57.895 6.82 6.82 0.00 4.57
1800 1856 1.826054 CCAGAAAACCCACCGTGCA 60.826 57.895 0.00 0.00 0.00 4.57
1801 1857 3.039134 CCAGAAAACCCACCGTGC 58.961 61.111 0.00 0.00 0.00 5.34
1802 1858 1.388065 TTGCCAGAAAACCCACCGTG 61.388 55.000 0.00 0.00 0.00 4.94
1803 1859 0.469144 ATTGCCAGAAAACCCACCGT 60.469 50.000 0.00 0.00 0.00 4.83
1804 1860 0.038343 CATTGCCAGAAAACCCACCG 60.038 55.000 0.00 0.00 0.00 4.94
1805 1861 0.320683 GCATTGCCAGAAAACCCACC 60.321 55.000 0.00 0.00 0.00 4.61
1806 1862 0.667184 CGCATTGCCAGAAAACCCAC 60.667 55.000 2.41 0.00 0.00 4.61
1807 1863 1.112315 ACGCATTGCCAGAAAACCCA 61.112 50.000 2.41 0.00 0.00 4.51
1808 1864 0.033366 AACGCATTGCCAGAAAACCC 59.967 50.000 2.41 0.00 0.00 4.11
1809 1865 1.139163 CAACGCATTGCCAGAAAACC 58.861 50.000 2.41 0.00 0.00 3.27
1810 1866 1.139163 CCAACGCATTGCCAGAAAAC 58.861 50.000 2.41 0.00 34.17 2.43
1811 1867 1.035923 TCCAACGCATTGCCAGAAAA 58.964 45.000 2.41 0.00 34.17 2.29
1812 1868 0.313672 GTCCAACGCATTGCCAGAAA 59.686 50.000 2.41 0.00 34.17 2.52
1813 1869 0.537143 AGTCCAACGCATTGCCAGAA 60.537 50.000 2.41 0.00 34.17 3.02
1814 1870 0.955428 GAGTCCAACGCATTGCCAGA 60.955 55.000 2.41 0.00 34.17 3.86
1815 1871 1.503542 GAGTCCAACGCATTGCCAG 59.496 57.895 2.41 0.00 34.17 4.85
1816 1872 2.324330 CGAGTCCAACGCATTGCCA 61.324 57.895 2.41 0.00 34.17 4.92
1817 1873 1.852067 AACGAGTCCAACGCATTGCC 61.852 55.000 2.41 0.00 34.17 4.52
1818 1874 0.793861 TAACGAGTCCAACGCATTGC 59.206 50.000 0.00 0.00 34.17 3.56
1819 1875 1.127951 GGTAACGAGTCCAACGCATTG 59.872 52.381 0.00 0.00 35.40 2.82
1820 1876 1.435577 GGTAACGAGTCCAACGCATT 58.564 50.000 0.00 0.00 0.00 3.56
1821 1877 0.390735 GGGTAACGAGTCCAACGCAT 60.391 55.000 0.00 0.00 37.60 4.73
1822 1878 1.005867 GGGTAACGAGTCCAACGCA 60.006 57.895 0.00 0.00 37.60 5.24
1823 1879 0.735287 GAGGGTAACGAGTCCAACGC 60.735 60.000 0.00 0.00 37.60 4.84
1824 1880 0.886563 AGAGGGTAACGAGTCCAACG 59.113 55.000 0.00 0.00 37.60 4.10
1825 1881 3.397849 AAAGAGGGTAACGAGTCCAAC 57.602 47.619 0.00 0.00 37.60 3.77
1826 1882 3.244318 GGAAAAGAGGGTAACGAGTCCAA 60.244 47.826 0.00 0.00 37.60 3.53
1827 1883 2.301009 GGAAAAGAGGGTAACGAGTCCA 59.699 50.000 0.00 0.00 37.60 4.02
1828 1884 2.566279 AGGAAAAGAGGGTAACGAGTCC 59.434 50.000 0.00 0.00 37.60 3.85
1829 1885 3.957591 AGGAAAAGAGGGTAACGAGTC 57.042 47.619 0.00 0.00 37.60 3.36
1830 1886 3.902467 AGAAGGAAAAGAGGGTAACGAGT 59.098 43.478 0.00 0.00 37.60 4.18
1831 1887 4.496360 GAGAAGGAAAAGAGGGTAACGAG 58.504 47.826 0.00 0.00 37.60 4.18
1832 1888 3.260128 GGAGAAGGAAAAGAGGGTAACGA 59.740 47.826 0.00 0.00 37.60 3.85
1833 1889 3.597255 GGAGAAGGAAAAGAGGGTAACG 58.403 50.000 0.00 0.00 37.60 3.18
1834 1890 3.587951 AGGGAGAAGGAAAAGAGGGTAAC 59.412 47.826 0.00 0.00 0.00 2.50
1835 1891 3.587506 CAGGGAGAAGGAAAAGAGGGTAA 59.412 47.826 0.00 0.00 0.00 2.85
1836 1892 3.182152 CAGGGAGAAGGAAAAGAGGGTA 58.818 50.000 0.00 0.00 0.00 3.69
1837 1893 1.988846 CAGGGAGAAGGAAAAGAGGGT 59.011 52.381 0.00 0.00 0.00 4.34
1838 1894 1.283321 CCAGGGAGAAGGAAAAGAGGG 59.717 57.143 0.00 0.00 0.00 4.30
1839 1895 1.988846 ACCAGGGAGAAGGAAAAGAGG 59.011 52.381 0.00 0.00 0.00 3.69
1840 1896 3.797559 AACCAGGGAGAAGGAAAAGAG 57.202 47.619 0.00 0.00 0.00 2.85
1841 1897 4.601857 ACATAACCAGGGAGAAGGAAAAGA 59.398 41.667 0.00 0.00 0.00 2.52
1842 1898 4.923415 ACATAACCAGGGAGAAGGAAAAG 58.077 43.478 0.00 0.00 0.00 2.27
1843 1899 4.263771 GGACATAACCAGGGAGAAGGAAAA 60.264 45.833 0.00 0.00 0.00 2.29
1844 1900 3.265995 GGACATAACCAGGGAGAAGGAAA 59.734 47.826 0.00 0.00 0.00 3.13
1845 1901 2.844348 GGACATAACCAGGGAGAAGGAA 59.156 50.000 0.00 0.00 0.00 3.36
1846 1902 2.478292 GGACATAACCAGGGAGAAGGA 58.522 52.381 0.00 0.00 0.00 3.36
1847 1903 1.139058 CGGACATAACCAGGGAGAAGG 59.861 57.143 0.00 0.00 0.00 3.46
1848 1904 1.139058 CCGGACATAACCAGGGAGAAG 59.861 57.143 0.00 0.00 0.00 2.85
1849 1905 1.200519 CCGGACATAACCAGGGAGAA 58.799 55.000 0.00 0.00 0.00 2.87
1850 1906 0.337082 TCCGGACATAACCAGGGAGA 59.663 55.000 0.00 0.00 0.00 3.71
1851 1907 1.134491 GTTCCGGACATAACCAGGGAG 60.134 57.143 1.83 0.00 0.00 4.30
1852 1908 0.906775 GTTCCGGACATAACCAGGGA 59.093 55.000 1.83 0.00 0.00 4.20
1853 1909 0.909623 AGTTCCGGACATAACCAGGG 59.090 55.000 1.83 0.00 0.00 4.45
1854 1910 2.747446 CAAAGTTCCGGACATAACCAGG 59.253 50.000 1.83 0.00 0.00 4.45
1855 1911 3.408634 ACAAAGTTCCGGACATAACCAG 58.591 45.455 1.83 0.00 0.00 4.00
1856 1912 3.495434 ACAAAGTTCCGGACATAACCA 57.505 42.857 1.83 0.00 0.00 3.67
1857 1913 6.373495 AGAAATACAAAGTTCCGGACATAACC 59.627 38.462 1.83 0.00 29.89 2.85
1858 1914 7.094933 ACAGAAATACAAAGTTCCGGACATAAC 60.095 37.037 1.83 0.00 29.89 1.89
1859 1915 6.938030 ACAGAAATACAAAGTTCCGGACATAA 59.062 34.615 1.83 0.00 29.89 1.90
1860 1916 6.469410 ACAGAAATACAAAGTTCCGGACATA 58.531 36.000 1.83 0.00 29.89 2.29
1861 1917 5.313712 ACAGAAATACAAAGTTCCGGACAT 58.686 37.500 1.83 0.00 29.89 3.06
1862 1918 4.710324 ACAGAAATACAAAGTTCCGGACA 58.290 39.130 1.83 0.00 29.89 4.02
1863 1919 5.684550 AACAGAAATACAAAGTTCCGGAC 57.315 39.130 1.83 0.00 29.89 4.79
1864 1920 7.804843 TTAAACAGAAATACAAAGTTCCGGA 57.195 32.000 0.00 0.00 29.89 5.14
1865 1921 7.061789 GCATTAAACAGAAATACAAAGTTCCGG 59.938 37.037 0.00 0.00 29.89 5.14
1866 1922 7.593273 TGCATTAAACAGAAATACAAAGTTCCG 59.407 33.333 0.00 0.00 29.89 4.30
1867 1923 8.810652 TGCATTAAACAGAAATACAAAGTTCC 57.189 30.769 0.00 0.00 29.89 3.62
1872 1928 9.770097 TCCATTTGCATTAAACAGAAATACAAA 57.230 25.926 0.00 0.00 35.27 2.83
1873 1929 9.770097 TTCCATTTGCATTAAACAGAAATACAA 57.230 25.926 0.00 0.00 0.00 2.41
1874 1930 9.770097 TTTCCATTTGCATTAAACAGAAATACA 57.230 25.926 0.00 0.00 32.23 2.29
1876 1932 9.434420 CCTTTCCATTTGCATTAAACAGAAATA 57.566 29.630 0.00 0.00 34.62 1.40
1877 1933 7.391275 CCCTTTCCATTTGCATTAAACAGAAAT 59.609 33.333 0.00 0.00 34.62 2.17
1878 1934 6.709846 CCCTTTCCATTTGCATTAAACAGAAA 59.290 34.615 0.00 0.00 34.27 2.52
1879 1935 6.229733 CCCTTTCCATTTGCATTAAACAGAA 58.770 36.000 0.00 0.00 0.00 3.02
1880 1936 5.279910 CCCCTTTCCATTTGCATTAAACAGA 60.280 40.000 0.00 0.00 0.00 3.41
1881 1937 4.937015 CCCCTTTCCATTTGCATTAAACAG 59.063 41.667 0.00 0.00 0.00 3.16
1882 1938 4.349342 ACCCCTTTCCATTTGCATTAAACA 59.651 37.500 0.00 0.00 0.00 2.83
1883 1939 4.905429 ACCCCTTTCCATTTGCATTAAAC 58.095 39.130 0.00 0.00 0.00 2.01
1884 1940 6.648192 CATACCCCTTTCCATTTGCATTAAA 58.352 36.000 0.00 0.00 0.00 1.52
1885 1941 5.396213 GCATACCCCTTTCCATTTGCATTAA 60.396 40.000 0.00 0.00 0.00 1.40
1886 1942 4.100808 GCATACCCCTTTCCATTTGCATTA 59.899 41.667 0.00 0.00 0.00 1.90
1887 1943 3.118298 GCATACCCCTTTCCATTTGCATT 60.118 43.478 0.00 0.00 0.00 3.56
1888 1944 2.435437 GCATACCCCTTTCCATTTGCAT 59.565 45.455 0.00 0.00 0.00 3.96
1889 1945 1.830477 GCATACCCCTTTCCATTTGCA 59.170 47.619 0.00 0.00 0.00 4.08
1890 1946 1.138859 GGCATACCCCTTTCCATTTGC 59.861 52.381 0.00 0.00 0.00 3.68
1891 1947 2.431782 CAGGCATACCCCTTTCCATTTG 59.568 50.000 0.00 0.00 36.11 2.32
1892 1948 2.626683 CCAGGCATACCCCTTTCCATTT 60.627 50.000 0.00 0.00 36.11 2.32
1893 1949 1.062962 CCAGGCATACCCCTTTCCATT 60.063 52.381 0.00 0.00 36.11 3.16
1894 1950 0.557729 CCAGGCATACCCCTTTCCAT 59.442 55.000 0.00 0.00 36.11 3.41
1895 1951 0.849094 ACCAGGCATACCCCTTTCCA 60.849 55.000 0.00 0.00 36.11 3.53
1896 1952 0.395724 CACCAGGCATACCCCTTTCC 60.396 60.000 0.00 0.00 36.11 3.13
1897 1953 1.037579 GCACCAGGCATACCCCTTTC 61.038 60.000 0.00 0.00 43.97 2.62
1898 1954 1.000359 GCACCAGGCATACCCCTTT 60.000 57.895 0.00 0.00 43.97 3.11
1899 1955 2.683475 GCACCAGGCATACCCCTT 59.317 61.111 0.00 0.00 43.97 3.95
1919 1975 9.777297 ATATATTGACCTGCAAAGTTTGTTTTT 57.223 25.926 16.70 0.09 40.48 1.94
1920 1976 9.777297 AATATATTGACCTGCAAAGTTTGTTTT 57.223 25.926 16.70 0.00 40.48 2.43
1979 2035 4.631813 GCTCAATCGACCAACACTATCTTT 59.368 41.667 0.00 0.00 0.00 2.52
2002 2058 2.665519 CGTGGTCAAGGAAAATTCAGCG 60.666 50.000 0.00 0.00 0.00 5.18
2190 2246 2.490115 GTCACAAAAACGGATGGCCATA 59.510 45.455 20.84 0.00 0.00 2.74
2195 2251 0.239879 CGGGTCACAAAAACGGATGG 59.760 55.000 0.00 0.00 0.00 3.51
2214 2270 5.866092 GGGAGAAGAAAGAAATTTCATGCAC 59.134 40.000 19.99 5.87 33.53 4.57
2266 2323 6.406400 GGTGCAATATATTGTTGGCCTGTAAA 60.406 38.462 23.14 0.00 39.88 2.01
2381 2438 5.776358 AGATTTTTCTTGGTGCCCCATATA 58.224 37.500 0.00 0.00 41.49 0.86
2382 2439 4.623863 AGATTTTTCTTGGTGCCCCATAT 58.376 39.130 0.00 0.00 41.49 1.78
2388 2445 3.431415 ACCCTAGATTTTTCTTGGTGCC 58.569 45.455 0.00 0.00 32.05 5.01
2489 2547 6.867816 TGTGTTGTGATCCATGCTTAAATTTC 59.132 34.615 0.00 0.00 0.00 2.17
2507 2565 4.261572 CCAGACCATCGATTTTTGTGTTGT 60.262 41.667 0.00 0.00 0.00 3.32
2520 2578 1.762957 ACACCCTTATCCAGACCATCG 59.237 52.381 0.00 0.00 0.00 3.84
2552 2610 5.702209 GGAAAATTTGTGATTGAGCACCATT 59.298 36.000 0.00 0.00 37.99 3.16
2553 2611 5.012354 AGGAAAATTTGTGATTGAGCACCAT 59.988 36.000 0.00 0.00 37.99 3.55
2554 2612 4.344679 AGGAAAATTTGTGATTGAGCACCA 59.655 37.500 0.00 0.00 37.99 4.17
2656 2714 2.203640 AGCTGGTCGGTGGTGAGA 60.204 61.111 0.00 0.00 0.00 3.27
2912 2970 0.396811 AGGTAGCGGCAGTTTTCACT 59.603 50.000 1.45 0.00 0.00 3.41
2913 2971 0.517316 CAGGTAGCGGCAGTTTTCAC 59.483 55.000 1.45 0.00 0.00 3.18
2914 2972 0.605319 CCAGGTAGCGGCAGTTTTCA 60.605 55.000 1.45 0.00 0.00 2.69
3065 3132 4.008933 GAGCAGCCACGTGGTCCT 62.009 66.667 33.92 25.73 38.73 3.85
3185 3252 0.880278 CCATTGTCGCCCACGGATAG 60.880 60.000 0.00 0.00 40.63 2.08
3386 3460 3.068691 CTCCAGCTCGTCCCGGAA 61.069 66.667 0.73 0.00 0.00 4.30
3592 3669 2.104859 CCTACGGACGCACGAGAGA 61.105 63.158 6.34 0.00 37.61 3.10
3639 3722 2.128128 GCACAGACGCGTTGTTCG 60.128 61.111 15.53 9.88 43.12 3.95
3755 3859 4.899239 GTCCTGCGAGGCATCCCG 62.899 72.222 0.00 0.00 38.13 5.14
4085 4201 2.180017 CGGTGGCTGCATGCTTTC 59.820 61.111 20.33 8.41 42.39 2.62
4101 4217 5.050490 AGTATGCTCACATTTAAGCTACCG 58.950 41.667 0.00 0.00 39.31 4.02
4106 4222 6.917217 AGAGAAGTATGCTCACATTTAAGC 57.083 37.500 0.00 0.00 46.10 3.09
4110 4226 5.694006 GCGATAGAGAAGTATGCTCACATTT 59.306 40.000 0.00 0.00 46.10 2.32
4111 4227 5.010516 AGCGATAGAGAAGTATGCTCACATT 59.989 40.000 0.00 0.00 46.10 2.71
4114 4230 4.497473 AGCGATAGAGAAGTATGCTCAC 57.503 45.455 0.00 0.00 46.10 3.51
4138 4360 4.000988 ACTGGCTCGGTACAAATTACAAG 58.999 43.478 0.00 0.00 0.00 3.16
4266 4489 1.308998 GAATAGCCGACCACCCATTG 58.691 55.000 0.00 0.00 0.00 2.82
4272 4495 2.418976 GGTTTTCTGAATAGCCGACCAC 59.581 50.000 0.00 0.00 0.00 4.16
4287 4511 4.350368 ACAATGGTCATTTGGGGTTTTC 57.650 40.909 0.00 0.00 0.00 2.29
4316 4540 4.258543 CGGCCTGTCATAAAGAGGTTTAA 58.741 43.478 0.00 0.00 40.65 1.52
4324 4548 1.823899 GGCCCGGCCTGTCATAAAG 60.824 63.158 22.31 0.00 46.69 1.85
4363 4587 5.445845 CCACATGTTAGTTAACGGTCAAAC 58.554 41.667 0.00 2.60 39.00 2.93
4439 4663 1.408822 GGGCGGAAATGGTCTCTGATT 60.409 52.381 0.00 0.00 0.00 2.57
4450 4674 2.914908 GCAACACACGGGCGGAAAT 61.915 57.895 0.00 0.00 0.00 2.17
4454 4678 4.622456 GTTGCAACACACGGGCGG 62.622 66.667 24.52 0.00 0.00 6.13
4544 4768 3.119101 AGGATAAGTGATGACGTGGACAC 60.119 47.826 0.00 0.00 0.00 3.67
4628 4852 0.754587 TGTGTCATGTGGCAGCCAAA 60.755 50.000 18.28 12.58 34.18 3.28
4695 4921 0.695347 AGGAGAAGCCAAGTCAAGGG 59.305 55.000 0.00 0.00 40.02 3.95
4701 4927 1.283321 GGAATGGAGGAGAAGCCAAGT 59.717 52.381 0.00 0.00 40.02 3.16
4735 4961 9.625747 AGTGATTTGGAATTTGGTTTTGTTAAT 57.374 25.926 0.00 0.00 0.00 1.40
4820 5083 3.704566 TGTGGAAATATGAGCGACTAGGT 59.295 43.478 0.00 0.00 0.00 3.08
4822 5085 4.742167 CACTGTGGAAATATGAGCGACTAG 59.258 45.833 0.00 0.00 0.00 2.57
4823 5086 4.401202 TCACTGTGGAAATATGAGCGACTA 59.599 41.667 8.11 0.00 0.00 2.59
4826 5089 3.885724 TCACTGTGGAAATATGAGCGA 57.114 42.857 8.11 0.00 0.00 4.93
5041 5307 9.099454 GGAAAATACTCGAATAACTGAATCACT 57.901 33.333 0.00 0.00 0.00 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.