Multiple sequence alignment - TraesCS2A01G571400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G571400 chr2A 100.000 2288 0 0 1 2288 768287016 768284729 0 4226
1 TraesCS2A01G571400 chr2A 92.634 1602 91 10 1 1581 706884737 706886332 0 2279
2 TraesCS2A01G571400 chr2A 98.864 440 5 0 1847 2286 771207336 771206897 0 785
3 TraesCS2A01G571400 chr2A 98.639 441 4 1 1848 2286 612302156 612301716 0 780
4 TraesCS2A01G571400 chr1D 94.997 1719 70 4 1 1704 423893327 423895044 0 2684
5 TraesCS2A01G571400 chr1D 92.749 1724 86 10 3 1704 369900548 369902254 0 2455
6 TraesCS2A01G571400 chr2D 94.080 1723 80 7 3 1705 644388802 644390522 0 2597
7 TraesCS2A01G571400 chr3D 93.961 1722 87 7 1 1707 121530701 121532420 0 2588
8 TraesCS2A01G571400 chr3D 93.526 1730 95 9 1 1714 5431481 5429753 0 2558
9 TraesCS2A01G571400 chr3D 88.350 1751 142 28 1 1707 41618545 41616813 0 2047
10 TraesCS2A01G571400 chr7D 93.638 1729 77 13 1 1713 98406305 98404594 0 2553
11 TraesCS2A01G571400 chr7D 91.657 1726 91 18 1 1704 568007497 568005803 0 2340
12 TraesCS2A01G571400 chr4D 93.576 1728 73 12 2 1713 466289365 466291070 0 2542
13 TraesCS2A01G571400 chr4D 93.256 1720 75 15 1 1704 504270334 504272028 0 2495
14 TraesCS2A01G571400 chr4D 94.134 1074 48 6 1 1059 398284708 398285781 0 1620
15 TraesCS2A01G571400 chr5D 93.326 1723 79 12 1 1707 424049062 424047360 0 2512
16 TraesCS2A01G571400 chr1A 92.758 1726 84 16 1 1710 493296184 493294484 0 2457
17 TraesCS2A01G571400 chr1A 98.639 441 4 1 1848 2286 276773267 276773707 0 780
18 TraesCS2A01G571400 chr6D 92.530 1727 93 14 1 1704 446604642 446602929 0 2442
19 TraesCS2A01G571400 chr4B 91.125 1724 112 13 1 1708 529675392 529673694 0 2298
20 TraesCS2A01G571400 chr6B 90.010 961 77 11 1 944 88614467 88613509 0 1225
21 TraesCS2A01G571400 chr2B 86.865 1043 116 11 1 1027 383343057 383342020 0 1147
22 TraesCS2A01G571400 chr7A 98.864 440 5 0 1847 2286 725634617 725635056 0 785
23 TraesCS2A01G571400 chr7A 98.210 447 6 1 1842 2286 446009072 446009518 0 780
24 TraesCS2A01G571400 chr7A 98.633 439 6 0 1848 2286 641248703 641249141 0 778
25 TraesCS2A01G571400 chr4A 98.416 442 5 2 1847 2286 232084943 232085384 0 776
26 TraesCS2A01G571400 chr6A 98.194 443 8 0 1844 2286 7219235 7218793 0 774
27 TraesCS2A01G571400 chr3A 97.351 453 10 1 1836 2286 520165346 520165798 0 769


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G571400 chr2A 768284729 768287016 2287 True 4226 4226 100.000 1 2288 1 chr2A.!!$R2 2287
1 TraesCS2A01G571400 chr2A 706884737 706886332 1595 False 2279 2279 92.634 1 1581 1 chr2A.!!$F1 1580
2 TraesCS2A01G571400 chr1D 423893327 423895044 1717 False 2684 2684 94.997 1 1704 1 chr1D.!!$F2 1703
3 TraesCS2A01G571400 chr1D 369900548 369902254 1706 False 2455 2455 92.749 3 1704 1 chr1D.!!$F1 1701
4 TraesCS2A01G571400 chr2D 644388802 644390522 1720 False 2597 2597 94.080 3 1705 1 chr2D.!!$F1 1702
5 TraesCS2A01G571400 chr3D 121530701 121532420 1719 False 2588 2588 93.961 1 1707 1 chr3D.!!$F1 1706
6 TraesCS2A01G571400 chr3D 5429753 5431481 1728 True 2558 2558 93.526 1 1714 1 chr3D.!!$R1 1713
7 TraesCS2A01G571400 chr3D 41616813 41618545 1732 True 2047 2047 88.350 1 1707 1 chr3D.!!$R2 1706
8 TraesCS2A01G571400 chr7D 98404594 98406305 1711 True 2553 2553 93.638 1 1713 1 chr7D.!!$R1 1712
9 TraesCS2A01G571400 chr7D 568005803 568007497 1694 True 2340 2340 91.657 1 1704 1 chr7D.!!$R2 1703
10 TraesCS2A01G571400 chr4D 466289365 466291070 1705 False 2542 2542 93.576 2 1713 1 chr4D.!!$F2 1711
11 TraesCS2A01G571400 chr4D 504270334 504272028 1694 False 2495 2495 93.256 1 1704 1 chr4D.!!$F3 1703
12 TraesCS2A01G571400 chr4D 398284708 398285781 1073 False 1620 1620 94.134 1 1059 1 chr4D.!!$F1 1058
13 TraesCS2A01G571400 chr5D 424047360 424049062 1702 True 2512 2512 93.326 1 1707 1 chr5D.!!$R1 1706
14 TraesCS2A01G571400 chr1A 493294484 493296184 1700 True 2457 2457 92.758 1 1710 1 chr1A.!!$R1 1709
15 TraesCS2A01G571400 chr6D 446602929 446604642 1713 True 2442 2442 92.530 1 1704 1 chr6D.!!$R1 1703
16 TraesCS2A01G571400 chr4B 529673694 529675392 1698 True 2298 2298 91.125 1 1708 1 chr4B.!!$R1 1707
17 TraesCS2A01G571400 chr6B 88613509 88614467 958 True 1225 1225 90.010 1 944 1 chr6B.!!$R1 943
18 TraesCS2A01G571400 chr2B 383342020 383343057 1037 True 1147 1147 86.865 1 1027 1 chr2B.!!$R1 1026

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
444 460 0.109086 CGATGTTCGAGCACACCTCT 60.109 55.0 3.33 0.0 43.74 3.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2139 2200 0.030369 CCCTGCGACGGTAGTACATC 59.97 60.0 2.06 0.0 0.0 3.06 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
222 226 4.767578 ATAGTCGTCTCCCAGTACACTA 57.232 45.455 0.00 0.00 0.00 2.74
272 276 2.290641 GGTCTTGTACTTGCACCACTTG 59.709 50.000 0.00 0.00 0.00 3.16
343 347 3.121030 GTCAACTGCCATCGCGCT 61.121 61.111 5.56 0.00 38.08 5.92
444 460 0.109086 CGATGTTCGAGCACACCTCT 60.109 55.000 3.33 0.00 43.74 3.69
466 482 1.760613 TGGTGTTCTCGAACTTGGTCT 59.239 47.619 10.75 0.00 41.67 3.85
514 530 2.510906 CCCTCCAGCCAATACCCG 59.489 66.667 0.00 0.00 0.00 5.28
603 620 2.285743 AGAAGAGAGGGGGTGGGC 60.286 66.667 0.00 0.00 0.00 5.36
613 630 1.694856 GGGGTGGGCAAATAGTGGA 59.305 57.895 0.00 0.00 0.00 4.02
716 734 1.542915 GCCATGAACTCTGTGCAATGT 59.457 47.619 0.00 0.00 0.00 2.71
727 745 3.515104 TCTGTGCAATGTCTGACTCCATA 59.485 43.478 9.51 0.00 0.00 2.74
736 754 6.605471 ATGTCTGACTCCATAACTTGTGTA 57.395 37.500 9.51 0.00 0.00 2.90
985 1010 0.321653 GGTCATCCTTGCACCGAAGT 60.322 55.000 0.00 0.00 0.00 3.01
1073 1099 0.532862 AGGAACAACACCGACTGCTG 60.533 55.000 0.00 0.00 0.00 4.41
1173 1201 3.845781 ATCAAGATCGGCTACATGGTT 57.154 42.857 0.00 0.00 0.00 3.67
1195 1223 1.819288 CGTTCAAGCTCCTCACTCCTA 59.181 52.381 0.00 0.00 0.00 2.94
1253 1281 1.295792 GAGGTCGTCAACAAGTGCAA 58.704 50.000 0.00 0.00 0.00 4.08
1310 1338 2.347490 GGCCACCTCTTTCGAGCA 59.653 61.111 0.00 0.00 35.90 4.26
1385 1425 8.486210 TCTGTGGTACTGCTTATATCTGAATTT 58.514 33.333 0.00 0.00 0.00 1.82
1627 1687 4.957954 ACATGCATATGGTGAATTTGAGGT 59.042 37.500 0.00 0.00 38.66 3.85
1653 1713 2.691409 TGCATAACCAGGCTGAGTAC 57.309 50.000 17.94 0.61 31.14 2.73
1714 1775 2.409152 AACACGCCCGTAATGTTTTG 57.591 45.000 0.00 0.00 32.70 2.44
1715 1776 1.310904 ACACGCCCGTAATGTTTTGT 58.689 45.000 0.00 0.00 0.00 2.83
1716 1777 2.492012 ACACGCCCGTAATGTTTTGTA 58.508 42.857 0.00 0.00 0.00 2.41
1717 1778 2.481185 ACACGCCCGTAATGTTTTGTAG 59.519 45.455 0.00 0.00 0.00 2.74
1718 1779 1.465777 ACGCCCGTAATGTTTTGTAGC 59.534 47.619 0.00 0.00 0.00 3.58
1719 1780 1.465387 CGCCCGTAATGTTTTGTAGCA 59.535 47.619 0.00 0.00 0.00 3.49
1720 1781 2.095668 CGCCCGTAATGTTTTGTAGCAA 60.096 45.455 0.00 0.00 0.00 3.91
1721 1782 3.239254 GCCCGTAATGTTTTGTAGCAAC 58.761 45.455 0.00 0.00 0.00 4.17
1722 1783 3.057806 GCCCGTAATGTTTTGTAGCAACT 60.058 43.478 0.00 0.00 0.00 3.16
1723 1784 4.154556 GCCCGTAATGTTTTGTAGCAACTA 59.845 41.667 0.00 0.00 0.00 2.24
1724 1785 5.672819 GCCCGTAATGTTTTGTAGCAACTAG 60.673 44.000 0.00 0.00 0.00 2.57
1725 1786 5.321516 CCGTAATGTTTTGTAGCAACTAGC 58.678 41.667 0.00 0.00 46.19 3.42
1735 1796 3.633361 GCAACTAGCAGACCACCTT 57.367 52.632 0.00 0.00 44.79 3.50
1736 1797 1.160137 GCAACTAGCAGACCACCTTG 58.840 55.000 0.00 0.00 44.79 3.61
1737 1798 1.813513 CAACTAGCAGACCACCTTGG 58.186 55.000 0.00 0.00 45.02 3.61
1738 1799 0.693049 AACTAGCAGACCACCTTGGG 59.307 55.000 0.00 0.00 43.37 4.12
1739 1800 1.201429 ACTAGCAGACCACCTTGGGG 61.201 60.000 0.00 0.00 43.37 4.96
1740 1801 1.915078 CTAGCAGACCACCTTGGGGG 61.915 65.000 6.37 6.37 43.37 5.40
1765 1826 4.585526 GCGATGCCGACGATGGGA 62.586 66.667 0.00 0.00 38.22 4.37
1766 1827 2.355126 CGATGCCGACGATGGGAG 60.355 66.667 0.00 0.00 38.22 4.30
1767 1828 2.845550 CGATGCCGACGATGGGAGA 61.846 63.158 0.00 0.00 38.22 3.71
1768 1829 1.441729 GATGCCGACGATGGGAGAA 59.558 57.895 0.00 0.00 30.60 2.87
1769 1830 0.598680 GATGCCGACGATGGGAGAAG 60.599 60.000 0.00 0.00 30.60 2.85
1770 1831 1.330655 ATGCCGACGATGGGAGAAGT 61.331 55.000 0.00 0.00 30.60 3.01
1771 1832 1.519455 GCCGACGATGGGAGAAGTG 60.519 63.158 0.00 0.00 0.00 3.16
1772 1833 1.890894 CCGACGATGGGAGAAGTGT 59.109 57.895 0.00 0.00 0.00 3.55
1773 1834 0.179134 CCGACGATGGGAGAAGTGTC 60.179 60.000 0.00 0.00 0.00 3.67
1774 1835 0.811915 CGACGATGGGAGAAGTGTCT 59.188 55.000 0.00 0.00 36.55 3.41
1775 1836 1.468224 CGACGATGGGAGAAGTGTCTG 60.468 57.143 0.00 0.00 32.80 3.51
1776 1837 0.247736 ACGATGGGAGAAGTGTCTGC 59.752 55.000 0.00 0.00 41.33 4.26
1777 1838 0.534412 CGATGGGAGAAGTGTCTGCT 59.466 55.000 0.00 0.00 41.74 4.24
1778 1839 1.738365 CGATGGGAGAAGTGTCTGCTG 60.738 57.143 0.00 0.00 41.74 4.41
1779 1840 0.617413 ATGGGAGAAGTGTCTGCTGG 59.383 55.000 0.00 0.00 41.74 4.85
1780 1841 0.471780 TGGGAGAAGTGTCTGCTGGA 60.472 55.000 0.00 0.00 41.74 3.86
1781 1842 0.248843 GGGAGAAGTGTCTGCTGGAG 59.751 60.000 0.00 0.00 41.74 3.86
1782 1843 0.390998 GGAGAAGTGTCTGCTGGAGC 60.391 60.000 0.00 0.00 39.08 4.70
1783 1844 0.735632 GAGAAGTGTCTGCTGGAGCG 60.736 60.000 0.00 0.00 45.83 5.03
1785 1846 3.890936 AAGTGTCTGCTGGAGCGGC 62.891 63.158 2.31 0.00 46.62 6.53
1786 1847 4.385405 GTGTCTGCTGGAGCGGCT 62.385 66.667 0.00 0.00 46.62 5.52
1787 1848 4.074526 TGTCTGCTGGAGCGGCTC 62.075 66.667 21.57 21.57 46.62 4.70
1790 1851 4.441695 CTGCTGGAGCGGCTCGAA 62.442 66.667 22.63 13.03 45.83 3.71
1791 1852 4.742201 TGCTGGAGCGGCTCGAAC 62.742 66.667 22.63 15.31 45.83 3.95
1792 1853 4.742201 GCTGGAGCGGCTCGAACA 62.742 66.667 22.63 14.35 32.24 3.18
1793 1854 2.507992 CTGGAGCGGCTCGAACAG 60.508 66.667 22.63 19.27 0.00 3.16
1801 1862 3.184683 GCTCGAACAGCTGCTCCG 61.185 66.667 15.27 14.72 45.83 4.63
1802 1863 2.568612 CTCGAACAGCTGCTCCGA 59.431 61.111 15.27 18.09 0.00 4.55
1803 1864 1.080501 CTCGAACAGCTGCTCCGAA 60.081 57.895 15.27 4.65 0.00 4.30
1804 1865 0.667487 CTCGAACAGCTGCTCCGAAA 60.667 55.000 15.27 0.00 0.00 3.46
1805 1866 0.944311 TCGAACAGCTGCTCCGAAAC 60.944 55.000 15.27 0.00 0.00 2.78
1806 1867 1.221466 CGAACAGCTGCTCCGAAACA 61.221 55.000 15.27 0.00 0.00 2.83
1807 1868 0.514691 GAACAGCTGCTCCGAAACAG 59.485 55.000 15.27 0.00 36.96 3.16
1812 1873 2.427320 TGCTCCGAAACAGCAGCT 59.573 55.556 0.00 0.00 42.09 4.24
1813 1874 1.669115 TGCTCCGAAACAGCAGCTC 60.669 57.895 0.00 0.00 42.09 4.09
1814 1875 2.734673 GCTCCGAAACAGCAGCTCG 61.735 63.158 0.00 0.00 36.82 5.03
1817 1878 3.468007 CGAAACAGCAGCTCGGAG 58.532 61.111 0.00 0.00 0.00 4.63
1818 1879 2.097038 CGAAACAGCAGCTCGGAGG 61.097 63.158 7.20 0.00 0.00 4.30
1819 1880 2.359230 AAACAGCAGCTCGGAGGC 60.359 61.111 7.20 2.58 0.00 4.70
1820 1881 3.909086 AAACAGCAGCTCGGAGGCC 62.909 63.158 7.20 0.00 0.00 5.19
1825 1886 4.479993 CAGCTCGGAGGCCCAAGG 62.480 72.222 7.20 0.00 0.00 3.61
1826 1887 4.722535 AGCTCGGAGGCCCAAGGA 62.723 66.667 7.20 0.00 0.00 3.36
1827 1888 3.717294 GCTCGGAGGCCCAAGGAA 61.717 66.667 7.20 0.00 0.00 3.36
1828 1889 2.586792 CTCGGAGGCCCAAGGAAG 59.413 66.667 0.00 0.00 0.00 3.46
1829 1890 3.009115 TCGGAGGCCCAAGGAAGG 61.009 66.667 0.00 0.00 0.00 3.46
1830 1891 3.009115 CGGAGGCCCAAGGAAGGA 61.009 66.667 0.00 0.00 0.00 3.36
1831 1892 3.002371 GGAGGCCCAAGGAAGGAG 58.998 66.667 0.00 0.00 0.00 3.69
1832 1893 2.273776 GAGGCCCAAGGAAGGAGC 59.726 66.667 0.00 0.00 0.00 4.70
1833 1894 2.204213 AGGCCCAAGGAAGGAGCT 60.204 61.111 0.00 0.00 0.00 4.09
1834 1895 1.854507 AGGCCCAAGGAAGGAGCTT 60.855 57.895 0.00 0.00 0.00 3.74
1835 1896 1.680314 GGCCCAAGGAAGGAGCTTG 60.680 63.158 0.00 0.00 0.00 4.01
1836 1897 1.380302 GCCCAAGGAAGGAGCTTGA 59.620 57.895 0.00 0.00 0.00 3.02
1837 1898 0.033699 GCCCAAGGAAGGAGCTTGAT 60.034 55.000 0.00 0.00 0.00 2.57
1838 1899 1.760192 CCCAAGGAAGGAGCTTGATG 58.240 55.000 0.00 0.00 0.00 3.07
1839 1900 1.101331 CCAAGGAAGGAGCTTGATGC 58.899 55.000 0.00 0.00 43.29 3.91
1840 1901 1.615116 CCAAGGAAGGAGCTTGATGCA 60.615 52.381 0.00 0.00 45.94 3.96
1841 1902 2.165167 CAAGGAAGGAGCTTGATGCAA 58.835 47.619 0.00 0.00 45.94 4.08
1842 1903 2.125773 AGGAAGGAGCTTGATGCAAG 57.874 50.000 0.00 2.91 45.94 4.01
1843 1904 1.101331 GGAAGGAGCTTGATGCAAGG 58.899 55.000 9.01 0.00 45.94 3.61
1844 1905 1.101331 GAAGGAGCTTGATGCAAGGG 58.899 55.000 9.01 0.00 45.94 3.95
1845 1906 0.407139 AAGGAGCTTGATGCAAGGGT 59.593 50.000 9.01 0.00 45.94 4.34
1846 1907 0.034670 AGGAGCTTGATGCAAGGGTC 60.035 55.000 9.01 0.00 45.94 4.46
1847 1908 0.034670 GGAGCTTGATGCAAGGGTCT 60.035 55.000 9.01 0.00 45.94 3.85
1848 1909 1.093159 GAGCTTGATGCAAGGGTCTG 58.907 55.000 9.01 0.00 45.94 3.51
1849 1910 0.403271 AGCTTGATGCAAGGGTCTGT 59.597 50.000 9.01 0.00 45.94 3.41
1850 1911 1.202976 AGCTTGATGCAAGGGTCTGTT 60.203 47.619 9.01 0.00 45.94 3.16
1851 1912 1.068055 GCTTGATGCAAGGGTCTGTTG 60.068 52.381 9.01 0.00 41.31 3.33
1852 1913 1.542915 CTTGATGCAAGGGTCTGTTGG 59.457 52.381 0.00 0.00 37.77 3.77
1853 1914 0.251297 TGATGCAAGGGTCTGTTGGG 60.251 55.000 0.00 0.00 0.00 4.12
1854 1915 0.967380 GATGCAAGGGTCTGTTGGGG 60.967 60.000 0.00 0.00 0.00 4.96
1855 1916 1.434513 ATGCAAGGGTCTGTTGGGGA 61.435 55.000 0.00 0.00 0.00 4.81
1856 1917 1.152830 GCAAGGGTCTGTTGGGGAA 59.847 57.895 0.00 0.00 0.00 3.97
1857 1918 1.179174 GCAAGGGTCTGTTGGGGAAC 61.179 60.000 0.00 0.00 0.00 3.62
1858 1919 0.889186 CAAGGGTCTGTTGGGGAACG 60.889 60.000 0.00 0.00 0.00 3.95
1859 1920 1.350310 AAGGGTCTGTTGGGGAACGT 61.350 55.000 0.00 0.00 0.00 3.99
1860 1921 0.472352 AGGGTCTGTTGGGGAACGTA 60.472 55.000 0.00 0.00 0.00 3.57
1861 1922 0.036671 GGGTCTGTTGGGGAACGTAG 60.037 60.000 0.00 0.00 0.00 3.51
1863 1924 1.895131 GGTCTGTTGGGGAACGTAGTA 59.105 52.381 0.00 0.00 45.00 1.82
1864 1925 2.299867 GGTCTGTTGGGGAACGTAGTAA 59.700 50.000 0.00 0.00 45.00 2.24
1865 1926 3.055602 GGTCTGTTGGGGAACGTAGTAAT 60.056 47.826 0.00 0.00 45.00 1.89
1866 1927 4.564199 GGTCTGTTGGGGAACGTAGTAATT 60.564 45.833 0.00 0.00 45.00 1.40
1867 1928 4.999311 GTCTGTTGGGGAACGTAGTAATTT 59.001 41.667 0.00 0.00 45.00 1.82
1868 1929 5.121298 GTCTGTTGGGGAACGTAGTAATTTC 59.879 44.000 0.00 0.00 45.00 2.17
1869 1930 4.970711 TGTTGGGGAACGTAGTAATTTCA 58.029 39.130 0.00 0.00 45.00 2.69
1870 1931 5.374921 TGTTGGGGAACGTAGTAATTTCAA 58.625 37.500 0.00 0.00 45.00 2.69
1871 1932 5.826737 TGTTGGGGAACGTAGTAATTTCAAA 59.173 36.000 0.00 0.00 45.00 2.69
1872 1933 6.320672 TGTTGGGGAACGTAGTAATTTCAAAA 59.679 34.615 0.00 0.00 45.00 2.44
1873 1934 6.956202 TGGGGAACGTAGTAATTTCAAAAA 57.044 33.333 0.00 0.00 45.00 1.94
1890 1951 2.325509 AAAAATTCCTACGCACACGC 57.674 45.000 0.00 0.00 45.53 5.34
1891 1952 1.231221 AAAATTCCTACGCACACGCA 58.769 45.000 0.00 0.00 45.53 5.24
1892 1953 1.231221 AAATTCCTACGCACACGCAA 58.769 45.000 0.00 0.00 45.53 4.85
1893 1954 0.796312 AATTCCTACGCACACGCAAG 59.204 50.000 0.00 0.00 45.53 4.01
1894 1955 0.037697 ATTCCTACGCACACGCAAGA 60.038 50.000 0.00 0.00 45.53 3.02
1895 1956 0.037697 TTCCTACGCACACGCAAGAT 60.038 50.000 0.00 0.00 45.53 2.40
1896 1957 0.457853 TCCTACGCACACGCAAGATC 60.458 55.000 0.00 0.00 45.53 2.75
1897 1958 0.735978 CCTACGCACACGCAAGATCA 60.736 55.000 0.00 0.00 45.53 2.92
1898 1959 1.280982 CTACGCACACGCAAGATCAT 58.719 50.000 0.00 0.00 45.53 2.45
1899 1960 0.998669 TACGCACACGCAAGATCATG 59.001 50.000 0.00 0.00 45.53 3.07
1900 1961 1.061411 CGCACACGCAAGATCATGG 59.939 57.895 0.00 0.00 43.62 3.66
1901 1962 1.638388 CGCACACGCAAGATCATGGT 61.638 55.000 0.00 0.00 43.62 3.55
1902 1963 0.179181 GCACACGCAAGATCATGGTG 60.179 55.000 14.17 14.17 43.62 4.17
1903 1964 1.441738 CACACGCAAGATCATGGTGA 58.558 50.000 19.56 0.00 43.62 4.02
1904 1965 2.011947 CACACGCAAGATCATGGTGAT 58.988 47.619 19.56 0.00 40.34 3.06
1905 1966 2.011947 ACACGCAAGATCATGGTGATG 58.988 47.619 19.56 8.58 37.20 3.07
1906 1967 1.019673 ACGCAAGATCATGGTGATGC 58.980 50.000 0.00 3.06 37.20 3.91
1907 1968 1.018910 CGCAAGATCATGGTGATGCA 58.981 50.000 11.83 0.00 37.20 3.96
1908 1969 1.607148 CGCAAGATCATGGTGATGCAT 59.393 47.619 0.00 0.00 37.20 3.96
1909 1970 2.809696 CGCAAGATCATGGTGATGCATA 59.190 45.455 0.00 0.00 37.20 3.14
1910 1971 3.120304 CGCAAGATCATGGTGATGCATAG 60.120 47.826 0.00 0.00 37.20 2.23
1911 1972 3.366070 GCAAGATCATGGTGATGCATAGC 60.366 47.826 0.00 0.00 37.20 2.97
1912 1973 3.782656 AGATCATGGTGATGCATAGCA 57.217 42.857 0.00 4.86 44.86 3.49
1913 1974 4.094830 AGATCATGGTGATGCATAGCAA 57.905 40.909 0.00 0.00 43.62 3.91
1914 1975 4.663334 AGATCATGGTGATGCATAGCAAT 58.337 39.130 0.00 0.00 43.62 3.56
1915 1976 4.459337 AGATCATGGTGATGCATAGCAATG 59.541 41.667 0.00 5.10 43.62 2.82
1916 1977 3.822940 TCATGGTGATGCATAGCAATGA 58.177 40.909 13.21 13.21 43.62 2.57
1917 1978 3.818773 TCATGGTGATGCATAGCAATGAG 59.181 43.478 13.21 5.62 43.62 2.90
1918 1979 3.564053 TGGTGATGCATAGCAATGAGA 57.436 42.857 0.00 0.00 43.62 3.27
1919 1980 3.473625 TGGTGATGCATAGCAATGAGAG 58.526 45.455 0.00 0.00 43.62 3.20
1920 1981 2.812591 GGTGATGCATAGCAATGAGAGG 59.187 50.000 0.00 0.00 43.62 3.69
1921 1982 2.812591 GTGATGCATAGCAATGAGAGGG 59.187 50.000 0.00 0.00 43.62 4.30
1922 1983 2.224695 TGATGCATAGCAATGAGAGGGG 60.225 50.000 0.00 0.00 43.62 4.79
1923 1984 1.510492 TGCATAGCAATGAGAGGGGA 58.490 50.000 0.00 0.00 34.76 4.81
1924 1985 1.419012 TGCATAGCAATGAGAGGGGAG 59.581 52.381 0.00 0.00 34.76 4.30
1925 1986 1.696336 GCATAGCAATGAGAGGGGAGA 59.304 52.381 0.00 0.00 34.84 3.71
1926 1987 2.289569 GCATAGCAATGAGAGGGGAGAG 60.290 54.545 0.00 0.00 34.84 3.20
1927 1988 2.856760 TAGCAATGAGAGGGGAGAGT 57.143 50.000 0.00 0.00 0.00 3.24
1928 1989 1.202330 AGCAATGAGAGGGGAGAGTG 58.798 55.000 0.00 0.00 0.00 3.51
1929 1990 0.908198 GCAATGAGAGGGGAGAGTGT 59.092 55.000 0.00 0.00 0.00 3.55
1930 1991 1.406614 GCAATGAGAGGGGAGAGTGTG 60.407 57.143 0.00 0.00 0.00 3.82
1931 1992 2.182827 CAATGAGAGGGGAGAGTGTGA 58.817 52.381 0.00 0.00 0.00 3.58
1932 1993 2.770802 CAATGAGAGGGGAGAGTGTGAT 59.229 50.000 0.00 0.00 0.00 3.06
1933 1994 2.151502 TGAGAGGGGAGAGTGTGATC 57.848 55.000 0.00 0.00 0.00 2.92
1934 1995 1.643286 TGAGAGGGGAGAGTGTGATCT 59.357 52.381 0.00 0.00 0.00 2.75
1935 1996 2.853077 TGAGAGGGGAGAGTGTGATCTA 59.147 50.000 0.00 0.00 0.00 1.98
1936 1997 3.219281 GAGAGGGGAGAGTGTGATCTAC 58.781 54.545 0.00 0.00 0.00 2.59
1937 1998 1.950909 GAGGGGAGAGTGTGATCTACG 59.049 57.143 0.00 0.00 30.07 3.51
1938 1999 1.285373 AGGGGAGAGTGTGATCTACGT 59.715 52.381 0.00 0.00 30.07 3.57
1939 2000 2.508716 AGGGGAGAGTGTGATCTACGTA 59.491 50.000 0.00 0.00 30.07 3.57
1940 2001 2.617774 GGGGAGAGTGTGATCTACGTAC 59.382 54.545 0.00 0.00 30.07 3.67
1941 2002 2.617774 GGGAGAGTGTGATCTACGTACC 59.382 54.545 0.00 0.62 30.07 3.34
1942 2003 2.617774 GGAGAGTGTGATCTACGTACCC 59.382 54.545 0.00 0.00 0.00 3.69
1943 2004 3.543665 GAGAGTGTGATCTACGTACCCT 58.456 50.000 0.00 0.00 0.00 4.34
1944 2005 3.946558 GAGAGTGTGATCTACGTACCCTT 59.053 47.826 0.00 0.00 0.00 3.95
1945 2006 3.695060 AGAGTGTGATCTACGTACCCTTG 59.305 47.826 0.00 0.00 0.00 3.61
1946 2007 3.428532 AGTGTGATCTACGTACCCTTGT 58.571 45.455 0.00 0.00 0.00 3.16
1947 2008 4.592942 AGTGTGATCTACGTACCCTTGTA 58.407 43.478 0.00 0.00 0.00 2.41
1948 2009 4.639310 AGTGTGATCTACGTACCCTTGTAG 59.361 45.833 0.00 0.62 39.50 2.74
1952 2013 2.632377 TCTACGTACCCTTGTAGACCG 58.368 52.381 4.74 0.00 41.47 4.79
1953 2014 2.236146 TCTACGTACCCTTGTAGACCGA 59.764 50.000 4.74 0.00 41.47 4.69
1954 2015 1.168714 ACGTACCCTTGTAGACCGAC 58.831 55.000 0.00 0.00 0.00 4.79
1955 2016 1.167851 CGTACCCTTGTAGACCGACA 58.832 55.000 0.00 0.00 0.00 4.35
1956 2017 1.131883 CGTACCCTTGTAGACCGACAG 59.868 57.143 0.00 0.00 0.00 3.51
1957 2018 1.135170 GTACCCTTGTAGACCGACAGC 60.135 57.143 0.00 0.00 0.00 4.40
1958 2019 1.153823 CCCTTGTAGACCGACAGCG 60.154 63.158 0.00 0.00 37.24 5.18
1982 2043 1.823260 CGTTAGCACAACGCGGTTGA 61.823 55.000 22.26 3.38 45.28 3.18
1983 2044 0.515564 GTTAGCACAACGCGGTTGAT 59.484 50.000 22.26 13.46 45.28 2.57
1984 2045 0.515127 TTAGCACAACGCGGTTGATG 59.485 50.000 22.26 17.39 45.28 3.07
1985 2046 0.601576 TAGCACAACGCGGTTGATGT 60.602 50.000 22.26 11.72 45.28 3.06
1986 2047 0.601576 AGCACAACGCGGTTGATGTA 60.602 50.000 22.26 0.00 45.28 2.29
1987 2048 0.179225 GCACAACGCGGTTGATGTAG 60.179 55.000 22.26 1.41 45.28 2.74
1988 2049 1.144969 CACAACGCGGTTGATGTAGT 58.855 50.000 22.26 2.04 45.28 2.73
1989 2050 1.126113 CACAACGCGGTTGATGTAGTC 59.874 52.381 22.26 0.00 45.28 2.59
1990 2051 0.365523 CAACGCGGTTGATGTAGTCG 59.634 55.000 12.47 0.00 45.28 4.18
1991 2052 0.038892 AACGCGGTTGATGTAGTCGT 60.039 50.000 12.47 0.00 0.00 4.34
1992 2053 0.804364 ACGCGGTTGATGTAGTCGTA 59.196 50.000 12.47 0.00 0.00 3.43
1993 2054 1.186030 CGCGGTTGATGTAGTCGTAC 58.814 55.000 0.00 0.00 0.00 3.67
1994 2055 1.186030 GCGGTTGATGTAGTCGTACG 58.814 55.000 9.53 9.53 30.95 3.67
1995 2056 1.466360 GCGGTTGATGTAGTCGTACGT 60.466 52.381 16.05 0.00 30.95 3.57
1996 2057 2.434761 CGGTTGATGTAGTCGTACGTC 58.565 52.381 16.05 10.06 43.16 4.34
1997 2058 2.094894 CGGTTGATGTAGTCGTACGTCT 59.905 50.000 18.54 18.54 43.23 4.18
1998 2059 3.425359 CGGTTGATGTAGTCGTACGTCTT 60.425 47.826 19.61 2.66 43.23 3.01
1999 2060 4.094212 GGTTGATGTAGTCGTACGTCTTC 58.906 47.826 19.61 15.02 43.23 2.87
2000 2061 4.378770 GGTTGATGTAGTCGTACGTCTTCA 60.379 45.833 19.61 19.79 43.23 3.02
2001 2062 4.332186 TGATGTAGTCGTACGTCTTCAC 57.668 45.455 19.61 13.19 43.23 3.18
2019 2080 4.467084 GGCCCGACCGATCAAGCA 62.467 66.667 0.00 0.00 0.00 3.91
2020 2081 3.195698 GCCCGACCGATCAAGCAC 61.196 66.667 0.00 0.00 0.00 4.40
2021 2082 2.511600 CCCGACCGATCAAGCACC 60.512 66.667 0.00 0.00 0.00 5.01
2022 2083 2.885644 CCGACCGATCAAGCACCG 60.886 66.667 0.00 0.00 0.00 4.94
2023 2084 2.180769 CGACCGATCAAGCACCGA 59.819 61.111 0.00 0.00 0.00 4.69
2024 2085 1.445410 CGACCGATCAAGCACCGAA 60.445 57.895 0.00 0.00 0.00 4.30
2025 2086 1.011968 CGACCGATCAAGCACCGAAA 61.012 55.000 0.00 0.00 0.00 3.46
2026 2087 0.442699 GACCGATCAAGCACCGAAAC 59.557 55.000 0.00 0.00 0.00 2.78
2027 2088 0.034896 ACCGATCAAGCACCGAAACT 59.965 50.000 0.00 0.00 0.00 2.66
2028 2089 1.274167 ACCGATCAAGCACCGAAACTA 59.726 47.619 0.00 0.00 0.00 2.24
2029 2090 1.659098 CCGATCAAGCACCGAAACTAC 59.341 52.381 0.00 0.00 0.00 2.73
2030 2091 1.320555 CGATCAAGCACCGAAACTACG 59.679 52.381 0.00 0.00 0.00 3.51
2037 2098 4.180496 CCGAAACTACGGCACCTC 57.820 61.111 0.00 0.00 46.20 3.85
2038 2099 1.447314 CCGAAACTACGGCACCTCC 60.447 63.158 0.00 0.00 46.20 4.30
2048 2109 1.142097 GGCACCTCCGAGTTCTAGC 59.858 63.158 0.00 0.00 0.00 3.42
2049 2110 1.605058 GGCACCTCCGAGTTCTAGCA 61.605 60.000 0.00 0.00 0.00 3.49
2050 2111 0.458716 GCACCTCCGAGTTCTAGCAC 60.459 60.000 0.00 0.00 0.00 4.40
2051 2112 0.888619 CACCTCCGAGTTCTAGCACA 59.111 55.000 0.00 0.00 0.00 4.57
2052 2113 0.889306 ACCTCCGAGTTCTAGCACAC 59.111 55.000 0.00 0.00 0.00 3.82
2053 2114 0.179161 CCTCCGAGTTCTAGCACACG 60.179 60.000 5.46 5.46 0.00 4.49
2054 2115 0.522180 CTCCGAGTTCTAGCACACGT 59.478 55.000 10.84 0.00 0.00 4.49
2055 2116 0.956633 TCCGAGTTCTAGCACACGTT 59.043 50.000 10.84 0.00 0.00 3.99
2056 2117 1.068748 TCCGAGTTCTAGCACACGTTC 60.069 52.381 10.84 0.00 0.00 3.95
2057 2118 1.335597 CCGAGTTCTAGCACACGTTCA 60.336 52.381 10.84 0.00 0.00 3.18
2058 2119 1.979469 CGAGTTCTAGCACACGTTCAG 59.021 52.381 4.36 0.00 0.00 3.02
2059 2120 1.721926 GAGTTCTAGCACACGTTCAGC 59.278 52.381 0.00 0.00 0.00 4.26
2060 2121 1.341531 AGTTCTAGCACACGTTCAGCT 59.658 47.619 10.52 10.52 42.14 4.24
2061 2122 1.721926 GTTCTAGCACACGTTCAGCTC 59.278 52.381 9.17 0.00 39.68 4.09
2062 2123 0.109735 TCTAGCACACGTTCAGCTCG 60.110 55.000 9.17 4.49 39.68 5.03
2063 2124 0.109735 CTAGCACACGTTCAGCTCGA 60.110 55.000 9.17 0.00 39.68 4.04
2064 2125 0.526211 TAGCACACGTTCAGCTCGAT 59.474 50.000 9.17 0.00 39.68 3.59
2065 2126 1.010935 AGCACACGTTCAGCTCGATG 61.011 55.000 0.00 0.07 32.05 3.84
2066 2127 1.008875 GCACACGTTCAGCTCGATGA 61.009 55.000 0.00 0.00 0.00 2.92
2067 2128 0.710567 CACACGTTCAGCTCGATGAC 59.289 55.000 0.00 0.00 0.00 3.06
2068 2129 0.729478 ACACGTTCAGCTCGATGACG 60.729 55.000 0.00 4.93 41.26 4.35
2069 2130 0.454452 CACGTTCAGCTCGATGACGA 60.454 55.000 13.59 0.00 46.56 4.20
2077 2138 2.193786 TCGATGACGATCCCCGGA 59.806 61.111 0.73 0.00 43.81 5.14
2078 2139 2.191513 TCGATGACGATCCCCGGAC 61.192 63.158 0.73 0.00 43.81 4.79
2079 2140 2.194212 CGATGACGATCCCCGGACT 61.194 63.158 0.73 0.00 43.93 3.85
2080 2141 1.660917 GATGACGATCCCCGGACTC 59.339 63.158 0.73 0.00 43.93 3.36
2081 2142 1.807495 GATGACGATCCCCGGACTCC 61.807 65.000 0.73 0.00 43.93 3.85
2093 2154 3.071580 GGACTCCGATCCAGCAAAG 57.928 57.895 0.00 0.00 38.77 2.77
2094 2155 0.250513 GGACTCCGATCCAGCAAAGT 59.749 55.000 0.00 0.00 38.77 2.66
2095 2156 1.363744 GACTCCGATCCAGCAAAGTG 58.636 55.000 0.00 0.00 0.00 3.16
2096 2157 0.687354 ACTCCGATCCAGCAAAGTGT 59.313 50.000 0.00 0.00 0.00 3.55
2097 2158 1.338200 ACTCCGATCCAGCAAAGTGTC 60.338 52.381 0.00 0.00 0.00 3.67
2098 2159 0.389817 TCCGATCCAGCAAAGTGTCG 60.390 55.000 0.00 0.00 0.00 4.35
2099 2160 1.361668 CCGATCCAGCAAAGTGTCGG 61.362 60.000 0.00 0.00 41.98 4.79
2100 2161 1.361668 CGATCCAGCAAAGTGTCGGG 61.362 60.000 0.00 0.00 0.00 5.14
2101 2162 1.002134 ATCCAGCAAAGTGTCGGGG 60.002 57.895 0.00 0.00 0.00 5.73
2102 2163 1.488705 ATCCAGCAAAGTGTCGGGGA 61.489 55.000 0.00 0.00 0.00 4.81
2103 2164 1.228124 CCAGCAAAGTGTCGGGGAA 60.228 57.895 0.00 0.00 0.00 3.97
2104 2165 1.237285 CCAGCAAAGTGTCGGGGAAG 61.237 60.000 0.00 0.00 0.00 3.46
2105 2166 0.250295 CAGCAAAGTGTCGGGGAAGA 60.250 55.000 0.00 0.00 0.00 2.87
2106 2167 0.472471 AGCAAAGTGTCGGGGAAGAA 59.528 50.000 0.00 0.00 0.00 2.52
2107 2168 1.073923 AGCAAAGTGTCGGGGAAGAAT 59.926 47.619 0.00 0.00 0.00 2.40
2108 2169 1.886542 GCAAAGTGTCGGGGAAGAATT 59.113 47.619 0.00 0.00 0.00 2.17
2109 2170 2.095212 GCAAAGTGTCGGGGAAGAATTC 60.095 50.000 0.00 0.00 46.67 2.17
2120 2181 1.710013 GAAGAATTCCGTCAGCACGA 58.290 50.000 0.65 0.00 46.34 4.35
2121 2182 1.390463 GAAGAATTCCGTCAGCACGAC 59.610 52.381 0.65 0.00 46.34 4.34
2146 2207 4.111375 GTGGTGACGATCTTGATGTACT 57.889 45.455 0.00 0.00 0.00 2.73
2147 2208 5.244785 GTGGTGACGATCTTGATGTACTA 57.755 43.478 0.00 0.00 0.00 1.82
2148 2209 5.035443 GTGGTGACGATCTTGATGTACTAC 58.965 45.833 0.00 0.00 0.00 2.73
2149 2210 4.097437 TGGTGACGATCTTGATGTACTACC 59.903 45.833 0.00 0.00 0.00 3.18
2150 2211 4.280461 GTGACGATCTTGATGTACTACCG 58.720 47.826 0.00 0.00 0.00 4.02
2151 2212 3.943381 TGACGATCTTGATGTACTACCGT 59.057 43.478 0.00 0.00 0.00 4.83
2152 2213 4.034858 TGACGATCTTGATGTACTACCGTC 59.965 45.833 0.00 0.00 42.59 4.79
2153 2214 3.002042 ACGATCTTGATGTACTACCGTCG 59.998 47.826 0.00 0.00 0.00 5.12
2154 2215 2.838386 TCTTGATGTACTACCGTCGC 57.162 50.000 0.00 0.00 0.00 5.19
2155 2216 2.086094 TCTTGATGTACTACCGTCGCA 58.914 47.619 0.00 0.00 0.00 5.10
2156 2217 2.096980 TCTTGATGTACTACCGTCGCAG 59.903 50.000 0.00 0.00 0.00 5.18
2157 2218 0.736636 TGATGTACTACCGTCGCAGG 59.263 55.000 0.00 0.00 37.30 4.85
2158 2219 0.030369 GATGTACTACCGTCGCAGGG 59.970 60.000 0.00 0.00 35.02 4.45
2159 2220 2.012902 ATGTACTACCGTCGCAGGGC 62.013 60.000 0.00 0.00 35.02 5.19
2160 2221 2.044650 TACTACCGTCGCAGGGCT 60.045 61.111 1.26 0.00 35.02 5.19
2161 2222 1.679977 TACTACCGTCGCAGGGCTT 60.680 57.895 1.26 0.00 35.02 4.35
2162 2223 1.660560 TACTACCGTCGCAGGGCTTC 61.661 60.000 1.26 0.00 35.02 3.86
2163 2224 4.124351 TACCGTCGCAGGGCTTCG 62.124 66.667 1.26 0.00 35.02 3.79
2176 2237 2.125512 CTTCGCCTAAGCACCGCT 60.126 61.111 0.00 0.00 42.56 5.52
2177 2238 1.141019 CTTCGCCTAAGCACCGCTA 59.859 57.895 0.00 0.00 38.25 4.26
2178 2239 1.146358 CTTCGCCTAAGCACCGCTAC 61.146 60.000 0.00 0.00 38.25 3.58
2179 2240 1.879737 TTCGCCTAAGCACCGCTACA 61.880 55.000 0.00 0.00 38.25 2.74
2180 2241 1.447140 CGCCTAAGCACCGCTACAA 60.447 57.895 0.00 0.00 38.25 2.41
2181 2242 0.810031 CGCCTAAGCACCGCTACAAT 60.810 55.000 0.00 0.00 38.25 2.71
2182 2243 1.537348 CGCCTAAGCACCGCTACAATA 60.537 52.381 0.00 0.00 38.25 1.90
2183 2244 2.767505 GCCTAAGCACCGCTACAATAT 58.232 47.619 0.00 0.00 38.25 1.28
2184 2245 3.139077 GCCTAAGCACCGCTACAATATT 58.861 45.455 0.00 0.00 38.25 1.28
2185 2246 4.312443 GCCTAAGCACCGCTACAATATTA 58.688 43.478 0.00 0.00 38.25 0.98
2186 2247 4.935808 GCCTAAGCACCGCTACAATATTAT 59.064 41.667 0.00 0.00 38.25 1.28
2187 2248 5.063564 GCCTAAGCACCGCTACAATATTATC 59.936 44.000 0.00 0.00 38.25 1.75
2188 2249 5.288712 CCTAAGCACCGCTACAATATTATCG 59.711 44.000 0.00 0.00 38.25 2.92
2189 2250 4.514781 AGCACCGCTACAATATTATCGA 57.485 40.909 0.00 0.00 36.99 3.59
2190 2251 4.486090 AGCACCGCTACAATATTATCGAG 58.514 43.478 0.00 0.00 36.99 4.04
2191 2252 3.612860 GCACCGCTACAATATTATCGAGG 59.387 47.826 0.00 0.00 0.00 4.63
2192 2253 4.617530 GCACCGCTACAATATTATCGAGGA 60.618 45.833 0.00 0.00 0.00 3.71
2193 2254 5.651530 CACCGCTACAATATTATCGAGGAT 58.348 41.667 0.00 0.00 0.00 3.24
2194 2255 6.100004 CACCGCTACAATATTATCGAGGATT 58.900 40.000 0.00 0.00 0.00 3.01
2195 2256 7.255569 CACCGCTACAATATTATCGAGGATTA 58.744 38.462 0.00 0.00 0.00 1.75
2196 2257 7.921214 CACCGCTACAATATTATCGAGGATTAT 59.079 37.037 0.00 0.00 0.00 1.28
2197 2258 7.921214 ACCGCTACAATATTATCGAGGATTATG 59.079 37.037 0.00 0.00 0.00 1.90
2198 2259 7.382488 CCGCTACAATATTATCGAGGATTATGG 59.618 40.741 0.00 0.00 0.00 2.74
2199 2260 7.921214 CGCTACAATATTATCGAGGATTATGGT 59.079 37.037 0.00 0.00 0.00 3.55
2200 2261 9.035607 GCTACAATATTATCGAGGATTATGGTG 57.964 37.037 0.00 0.00 0.00 4.17
2201 2262 9.534565 CTACAATATTATCGAGGATTATGGTGG 57.465 37.037 0.00 0.00 0.00 4.61
2202 2263 8.146053 ACAATATTATCGAGGATTATGGTGGA 57.854 34.615 0.00 0.00 0.00 4.02
2203 2264 8.602424 ACAATATTATCGAGGATTATGGTGGAA 58.398 33.333 0.00 0.00 0.00 3.53
2204 2265 9.102757 CAATATTATCGAGGATTATGGTGGAAG 57.897 37.037 0.00 0.00 0.00 3.46
2205 2266 5.483685 TTATCGAGGATTATGGTGGAAGG 57.516 43.478 0.00 0.00 0.00 3.46
2206 2267 2.047061 TCGAGGATTATGGTGGAAGGG 58.953 52.381 0.00 0.00 0.00 3.95
2207 2268 1.072331 CGAGGATTATGGTGGAAGGGG 59.928 57.143 0.00 0.00 0.00 4.79
2208 2269 1.425448 GAGGATTATGGTGGAAGGGGG 59.575 57.143 0.00 0.00 0.00 5.40
2209 2270 0.178961 GGATTATGGTGGAAGGGGGC 60.179 60.000 0.00 0.00 0.00 5.80
2210 2271 0.555769 GATTATGGTGGAAGGGGGCA 59.444 55.000 0.00 0.00 0.00 5.36
2211 2272 0.261696 ATTATGGTGGAAGGGGGCAC 59.738 55.000 0.00 0.00 0.00 5.01
2231 2292 2.930230 CGCACACGGCTAAGAATATG 57.070 50.000 0.00 0.00 41.67 1.78
2232 2293 2.469826 CGCACACGGCTAAGAATATGA 58.530 47.619 0.00 0.00 41.67 2.15
2233 2294 3.059884 CGCACACGGCTAAGAATATGAT 58.940 45.455 0.00 0.00 41.67 2.45
2234 2295 3.121944 CGCACACGGCTAAGAATATGATC 59.878 47.826 0.00 0.00 41.67 2.92
2235 2296 4.058124 GCACACGGCTAAGAATATGATCA 58.942 43.478 0.00 0.00 40.25 2.92
2236 2297 4.084328 GCACACGGCTAAGAATATGATCAC 60.084 45.833 0.00 0.00 40.25 3.06
2237 2298 4.148871 CACACGGCTAAGAATATGATCACG 59.851 45.833 0.00 0.00 0.00 4.35
2238 2299 4.202121 ACACGGCTAAGAATATGATCACGT 60.202 41.667 0.00 0.00 0.00 4.49
2239 2300 4.148871 CACGGCTAAGAATATGATCACGTG 59.851 45.833 9.94 9.94 41.21 4.49
2240 2301 3.675225 CGGCTAAGAATATGATCACGTGG 59.325 47.826 17.00 0.00 0.00 4.94
2241 2302 4.558697 CGGCTAAGAATATGATCACGTGGA 60.559 45.833 17.00 2.69 0.00 4.02
2242 2303 5.482908 GGCTAAGAATATGATCACGTGGAT 58.517 41.667 17.00 7.95 39.53 3.41
2252 2313 2.613026 TCACGTGGATCAACTTGTGT 57.387 45.000 17.00 0.00 0.00 3.72
2253 2314 2.479837 TCACGTGGATCAACTTGTGTC 58.520 47.619 17.00 0.00 0.00 3.67
2254 2315 2.102420 TCACGTGGATCAACTTGTGTCT 59.898 45.455 17.00 0.00 0.00 3.41
2255 2316 3.319689 TCACGTGGATCAACTTGTGTCTA 59.680 43.478 17.00 0.00 0.00 2.59
2256 2317 3.675225 CACGTGGATCAACTTGTGTCTAG 59.325 47.826 7.95 0.00 0.00 2.43
2257 2318 3.254060 CGTGGATCAACTTGTGTCTAGG 58.746 50.000 0.00 0.00 0.00 3.02
2258 2319 3.600388 GTGGATCAACTTGTGTCTAGGG 58.400 50.000 0.00 0.00 0.00 3.53
2259 2320 2.571653 TGGATCAACTTGTGTCTAGGGG 59.428 50.000 0.00 0.00 0.00 4.79
2260 2321 2.572104 GGATCAACTTGTGTCTAGGGGT 59.428 50.000 0.00 0.00 0.00 4.95
2261 2322 3.600388 GATCAACTTGTGTCTAGGGGTG 58.400 50.000 0.00 0.00 0.00 4.61
2262 2323 1.071699 TCAACTTGTGTCTAGGGGTGC 59.928 52.381 0.00 0.00 0.00 5.01
2263 2324 0.400594 AACTTGTGTCTAGGGGTGCC 59.599 55.000 0.00 0.00 0.00 5.01
2264 2325 1.299976 CTTGTGTCTAGGGGTGCCC 59.700 63.158 0.00 0.00 45.90 5.36
2279 2340 2.204090 CCCCCTGCCCCCGTATAT 60.204 66.667 0.00 0.00 0.00 0.86
2280 2341 1.081462 CCCCCTGCCCCCGTATATA 59.919 63.158 0.00 0.00 0.00 0.86
2281 2342 0.548197 CCCCCTGCCCCCGTATATAA 60.548 60.000 0.00 0.00 0.00 0.98
2282 2343 1.364269 CCCCTGCCCCCGTATATAAA 58.636 55.000 0.00 0.00 0.00 1.40
2283 2344 1.280998 CCCCTGCCCCCGTATATAAAG 59.719 57.143 0.00 0.00 0.00 1.85
2284 2345 1.280998 CCCTGCCCCCGTATATAAAGG 59.719 57.143 0.00 0.00 0.00 3.11
2285 2346 2.262637 CCTGCCCCCGTATATAAAGGA 58.737 52.381 7.00 0.00 0.00 3.36
2286 2347 2.640826 CCTGCCCCCGTATATAAAGGAA 59.359 50.000 7.00 0.00 0.00 3.36
2287 2348 3.265995 CCTGCCCCCGTATATAAAGGAAT 59.734 47.826 7.00 0.00 0.00 3.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 1.710339 GCACGGCGATGAAGAAGAC 59.290 57.895 16.62 0.00 0.00 3.01
192 196 2.582498 GACGACTATTGCGCCGCT 60.582 61.111 11.67 0.00 0.00 5.52
200 204 3.965694 AGTGTACTGGGAGACGACTATT 58.034 45.455 0.00 0.00 0.00 1.73
222 226 0.734942 CCTAATGAACGTCGTGCCGT 60.735 55.000 0.00 0.00 44.23 5.68
233 237 3.039011 GACCTACTGGGCTCCTAATGAA 58.961 50.000 0.00 0.00 38.69 2.57
272 276 2.737679 CGACGACCCTAAATGGAGGAAC 60.738 54.545 0.00 0.00 39.15 3.62
343 347 2.168521 CTGATTCCTAACCCAGCGAAGA 59.831 50.000 0.00 0.00 0.00 2.87
428 444 1.204704 CCATAGAGGTGTGCTCGAACA 59.795 52.381 0.00 0.00 0.00 3.18
444 460 3.576982 AGACCAAGTTCGAGAACACCATA 59.423 43.478 17.00 0.00 43.47 2.74
466 482 3.936203 GTGGACGGCTGGTGACCA 61.936 66.667 3.40 3.40 0.00 4.02
514 530 2.361230 CGCCAACCCCTTCCCTTC 60.361 66.667 0.00 0.00 0.00 3.46
558 575 1.002857 CAACCTTCCTCCTCCCCATT 58.997 55.000 0.00 0.00 0.00 3.16
603 620 0.625849 ACCCTGCCCTCCACTATTTG 59.374 55.000 0.00 0.00 0.00 2.32
613 630 3.910627 CCTATATTTACTCACCCTGCCCT 59.089 47.826 0.00 0.00 0.00 5.19
716 734 5.773176 TCTGTACACAAGTTATGGAGTCAGA 59.227 40.000 0.00 0.00 31.46 3.27
727 745 6.071560 TGTTATCCTCGATCTGTACACAAGTT 60.072 38.462 0.00 0.00 0.00 2.66
736 754 6.453943 CATCTCATTGTTATCCTCGATCTGT 58.546 40.000 0.00 0.00 0.00 3.41
853 872 3.358076 CTCAGGCGTCTTCGGGTCC 62.358 68.421 0.00 0.00 37.56 4.46
903 922 4.326766 TTGCGGCGCTTGTTGCTC 62.327 61.111 33.26 0.26 40.11 4.26
985 1010 2.582272 GCATGGGGATGCACTCAAA 58.418 52.632 2.14 0.00 46.25 2.69
1073 1099 0.951040 CTTGACCGTCACCTTCCAGC 60.951 60.000 0.00 0.00 0.00 4.85
1152 1178 3.845781 ACCATGTAGCCGATCTTGATT 57.154 42.857 0.00 0.00 0.00 2.57
1173 1201 1.544691 GGAGTGAGGAGCTTGAACGTA 59.455 52.381 0.00 0.00 0.00 3.57
1253 1281 3.208884 AAGGCGTCGTCGTGCTTCT 62.209 57.895 3.66 0.37 39.49 2.85
1310 1338 9.809096 CCATCAACTAGCATAATTCGATAGTAT 57.191 33.333 6.25 0.00 34.63 2.12
1335 1374 3.636282 AACAGTTCAACGCATAAACCC 57.364 42.857 0.00 0.00 0.00 4.11
1385 1425 7.331026 AGTATAAACAGAGCATCAACTAGCAA 58.669 34.615 0.00 0.00 37.82 3.91
1640 1700 1.620819 CACTTCTGTACTCAGCCTGGT 59.379 52.381 0.00 0.00 41.10 4.00
1714 1775 1.550976 AGGTGGTCTGCTAGTTGCTAC 59.449 52.381 0.00 0.00 43.37 3.58
1715 1776 1.938585 AGGTGGTCTGCTAGTTGCTA 58.061 50.000 0.00 0.00 43.37 3.49
1716 1777 1.059913 AAGGTGGTCTGCTAGTTGCT 58.940 50.000 0.00 0.00 43.37 3.91
1717 1778 1.160137 CAAGGTGGTCTGCTAGTTGC 58.840 55.000 0.00 0.00 43.25 4.17
1718 1779 1.611673 CCCAAGGTGGTCTGCTAGTTG 60.612 57.143 0.00 0.00 35.17 3.16
1719 1780 0.693049 CCCAAGGTGGTCTGCTAGTT 59.307 55.000 0.00 0.00 35.17 2.24
1720 1781 1.201429 CCCCAAGGTGGTCTGCTAGT 61.201 60.000 0.00 0.00 35.17 2.57
1721 1782 1.604378 CCCCAAGGTGGTCTGCTAG 59.396 63.158 0.00 0.00 35.17 3.42
1722 1783 1.923395 CCCCCAAGGTGGTCTGCTA 60.923 63.158 0.00 0.00 35.17 3.49
1723 1784 3.260100 CCCCCAAGGTGGTCTGCT 61.260 66.667 0.00 0.00 35.17 4.24
1748 1809 4.585526 TCCCATCGTCGGCATCGC 62.586 66.667 0.00 0.00 36.13 4.58
1749 1810 2.349969 TTCTCCCATCGTCGGCATCG 62.350 60.000 0.00 0.00 37.82 3.84
1750 1811 0.598680 CTTCTCCCATCGTCGGCATC 60.599 60.000 0.00 0.00 0.00 3.91
1751 1812 1.330655 ACTTCTCCCATCGTCGGCAT 61.331 55.000 0.00 0.00 0.00 4.40
1752 1813 1.982395 ACTTCTCCCATCGTCGGCA 60.982 57.895 0.00 0.00 0.00 5.69
1753 1814 1.519455 CACTTCTCCCATCGTCGGC 60.519 63.158 0.00 0.00 0.00 5.54
1754 1815 0.179134 GACACTTCTCCCATCGTCGG 60.179 60.000 0.00 0.00 0.00 4.79
1755 1816 0.811915 AGACACTTCTCCCATCGTCG 59.188 55.000 0.00 0.00 0.00 5.12
1756 1817 1.737363 GCAGACACTTCTCCCATCGTC 60.737 57.143 0.00 0.00 0.00 4.20
1757 1818 0.247736 GCAGACACTTCTCCCATCGT 59.752 55.000 0.00 0.00 0.00 3.73
1758 1819 0.534412 AGCAGACACTTCTCCCATCG 59.466 55.000 0.00 0.00 0.00 3.84
1759 1820 1.406614 CCAGCAGACACTTCTCCCATC 60.407 57.143 0.00 0.00 0.00 3.51
1760 1821 0.617413 CCAGCAGACACTTCTCCCAT 59.383 55.000 0.00 0.00 0.00 4.00
1761 1822 0.471780 TCCAGCAGACACTTCTCCCA 60.472 55.000 0.00 0.00 0.00 4.37
1762 1823 0.248843 CTCCAGCAGACACTTCTCCC 59.751 60.000 0.00 0.00 0.00 4.30
1763 1824 0.390998 GCTCCAGCAGACACTTCTCC 60.391 60.000 0.00 0.00 41.59 3.71
1764 1825 0.735632 CGCTCCAGCAGACACTTCTC 60.736 60.000 0.00 0.00 42.21 2.87
1765 1826 1.291588 CGCTCCAGCAGACACTTCT 59.708 57.895 0.00 0.00 42.21 2.85
1766 1827 1.739562 CCGCTCCAGCAGACACTTC 60.740 63.158 0.00 0.00 42.21 3.01
1767 1828 2.345244 CCGCTCCAGCAGACACTT 59.655 61.111 0.00 0.00 42.21 3.16
1768 1829 4.385405 GCCGCTCCAGCAGACACT 62.385 66.667 0.00 0.00 42.21 3.55
1769 1830 4.385405 AGCCGCTCCAGCAGACAC 62.385 66.667 0.00 0.00 42.21 3.67
1770 1831 4.074526 GAGCCGCTCCAGCAGACA 62.075 66.667 9.42 0.00 42.21 3.41
1773 1834 4.441695 TTCGAGCCGCTCCAGCAG 62.442 66.667 14.85 0.39 42.21 4.24
1774 1835 4.742201 GTTCGAGCCGCTCCAGCA 62.742 66.667 14.85 0.00 42.21 4.41
1775 1836 4.742201 TGTTCGAGCCGCTCCAGC 62.742 66.667 14.85 4.83 37.78 4.85
1776 1837 2.507992 CTGTTCGAGCCGCTCCAG 60.508 66.667 14.85 11.98 0.00 3.86
1777 1838 4.742201 GCTGTTCGAGCCGCTCCA 62.742 66.667 14.85 6.25 42.54 3.86
1785 1846 0.667487 TTTCGGAGCAGCTGTTCGAG 60.667 55.000 22.26 18.41 0.00 4.04
1786 1847 0.944311 GTTTCGGAGCAGCTGTTCGA 60.944 55.000 22.26 20.35 0.00 3.71
1787 1848 1.221466 TGTTTCGGAGCAGCTGTTCG 61.221 55.000 22.26 18.63 0.00 3.95
1788 1849 0.514691 CTGTTTCGGAGCAGCTGTTC 59.485 55.000 21.24 21.24 0.00 3.18
1789 1850 2.621763 CTGTTTCGGAGCAGCTGTT 58.378 52.632 16.64 9.79 0.00 3.16
1790 1851 4.368391 CTGTTTCGGAGCAGCTGT 57.632 55.556 16.64 1.59 0.00 4.40
1797 1858 3.468007 CGAGCTGCTGTTTCGGAG 58.532 61.111 7.01 0.00 0.00 4.63
1800 1861 2.097038 CCTCCGAGCTGCTGTTTCG 61.097 63.158 7.01 4.22 0.00 3.46
1801 1862 2.394563 GCCTCCGAGCTGCTGTTTC 61.395 63.158 7.01 0.00 0.00 2.78
1802 1863 2.359230 GCCTCCGAGCTGCTGTTT 60.359 61.111 7.01 0.00 0.00 2.83
1803 1864 4.400961 GGCCTCCGAGCTGCTGTT 62.401 66.667 7.01 0.00 0.00 3.16
1808 1869 4.479993 CCTTGGGCCTCCGAGCTG 62.480 72.222 4.53 0.00 42.18 4.24
1809 1870 4.722535 TCCTTGGGCCTCCGAGCT 62.723 66.667 4.53 0.00 42.18 4.09
1810 1871 3.689002 CTTCCTTGGGCCTCCGAGC 62.689 68.421 4.53 0.00 42.18 5.03
1811 1872 2.586792 CTTCCTTGGGCCTCCGAG 59.413 66.667 4.53 0.00 42.98 4.63
1812 1873 3.009115 CCTTCCTTGGGCCTCCGA 61.009 66.667 4.53 0.00 35.24 4.55
1813 1874 3.009115 TCCTTCCTTGGGCCTCCG 61.009 66.667 4.53 0.00 35.24 4.63
1814 1875 3.002371 CTCCTTCCTTGGGCCTCC 58.998 66.667 4.53 0.00 0.00 4.30
1815 1876 1.857638 AAGCTCCTTCCTTGGGCCTC 61.858 60.000 4.53 0.00 0.00 4.70
1816 1877 1.854507 AAGCTCCTTCCTTGGGCCT 60.855 57.895 4.53 0.00 0.00 5.19
1817 1878 1.680314 CAAGCTCCTTCCTTGGGCC 60.680 63.158 0.00 0.00 36.82 5.80
1818 1879 0.033699 ATCAAGCTCCTTCCTTGGGC 60.034 55.000 0.00 0.00 40.00 5.36
1819 1880 1.760192 CATCAAGCTCCTTCCTTGGG 58.240 55.000 0.00 0.00 40.00 4.12
1820 1881 1.101331 GCATCAAGCTCCTTCCTTGG 58.899 55.000 0.00 0.00 40.00 3.61
1821 1882 1.830279 TGCATCAAGCTCCTTCCTTG 58.170 50.000 0.00 0.00 45.94 3.61
1822 1883 2.444421 CTTGCATCAAGCTCCTTCCTT 58.556 47.619 0.00 0.00 45.94 3.36
1823 1884 1.340795 CCTTGCATCAAGCTCCTTCCT 60.341 52.381 1.25 0.00 45.94 3.36
1824 1885 1.101331 CCTTGCATCAAGCTCCTTCC 58.899 55.000 1.25 0.00 45.94 3.46
1825 1886 1.101331 CCCTTGCATCAAGCTCCTTC 58.899 55.000 1.25 0.00 45.94 3.46
1826 1887 0.407139 ACCCTTGCATCAAGCTCCTT 59.593 50.000 1.25 0.00 45.94 3.36
1827 1888 0.034670 GACCCTTGCATCAAGCTCCT 60.035 55.000 1.25 0.00 45.94 3.69
1828 1889 0.034670 AGACCCTTGCATCAAGCTCC 60.035 55.000 1.25 0.00 45.94 4.70
1829 1890 1.093159 CAGACCCTTGCATCAAGCTC 58.907 55.000 1.25 0.00 45.94 4.09
1830 1891 0.403271 ACAGACCCTTGCATCAAGCT 59.597 50.000 1.25 0.00 45.94 3.74
1831 1892 1.068055 CAACAGACCCTTGCATCAAGC 60.068 52.381 1.25 0.00 39.85 4.01
1832 1893 1.542915 CCAACAGACCCTTGCATCAAG 59.457 52.381 0.00 0.00 40.75 3.02
1833 1894 1.619654 CCAACAGACCCTTGCATCAA 58.380 50.000 0.00 0.00 0.00 2.57
1834 1895 0.251297 CCCAACAGACCCTTGCATCA 60.251 55.000 0.00 0.00 0.00 3.07
1835 1896 0.967380 CCCCAACAGACCCTTGCATC 60.967 60.000 0.00 0.00 0.00 3.91
1836 1897 1.077265 CCCCAACAGACCCTTGCAT 59.923 57.895 0.00 0.00 0.00 3.96
1837 1898 1.650242 TTCCCCAACAGACCCTTGCA 61.650 55.000 0.00 0.00 0.00 4.08
1838 1899 1.152830 TTCCCCAACAGACCCTTGC 59.847 57.895 0.00 0.00 0.00 4.01
1839 1900 0.889186 CGTTCCCCAACAGACCCTTG 60.889 60.000 0.00 0.00 32.14 3.61
1840 1901 1.350310 ACGTTCCCCAACAGACCCTT 61.350 55.000 0.00 0.00 32.14 3.95
1841 1902 0.472352 TACGTTCCCCAACAGACCCT 60.472 55.000 0.00 0.00 32.14 4.34
1842 1903 0.036671 CTACGTTCCCCAACAGACCC 60.037 60.000 0.00 0.00 32.14 4.46
1843 1904 0.683412 ACTACGTTCCCCAACAGACC 59.317 55.000 0.00 0.00 32.14 3.85
1844 1905 3.665745 TTACTACGTTCCCCAACAGAC 57.334 47.619 0.00 0.00 32.14 3.51
1845 1906 4.895668 AATTACTACGTTCCCCAACAGA 57.104 40.909 0.00 0.00 32.14 3.41
1846 1907 4.998672 TGAAATTACTACGTTCCCCAACAG 59.001 41.667 0.00 0.00 32.14 3.16
1847 1908 4.970711 TGAAATTACTACGTTCCCCAACA 58.029 39.130 0.00 0.00 32.14 3.33
1848 1909 5.945466 TTGAAATTACTACGTTCCCCAAC 57.055 39.130 0.00 0.00 0.00 3.77
1849 1910 6.956202 TTTTGAAATTACTACGTTCCCCAA 57.044 33.333 0.00 0.00 0.00 4.12
1850 1911 6.956202 TTTTTGAAATTACTACGTTCCCCA 57.044 33.333 0.00 0.00 0.00 4.96
1871 1932 2.325509 GCGTGTGCGTAGGAATTTTT 57.674 45.000 0.00 0.00 40.81 1.94
1883 1944 0.179181 CACCATGATCTTGCGTGTGC 60.179 55.000 15.81 0.00 43.20 4.57
1884 1945 1.441738 TCACCATGATCTTGCGTGTG 58.558 50.000 19.89 14.96 0.00 3.82
1885 1946 2.011947 CATCACCATGATCTTGCGTGT 58.988 47.619 19.89 6.63 34.28 4.49
1886 1947 1.268386 GCATCACCATGATCTTGCGTG 60.268 52.381 17.02 17.02 34.28 5.34
1887 1948 1.019673 GCATCACCATGATCTTGCGT 58.980 50.000 3.07 0.87 34.28 5.24
1888 1949 1.018910 TGCATCACCATGATCTTGCG 58.981 50.000 3.07 0.30 34.28 4.85
1889 1950 3.366070 GCTATGCATCACCATGATCTTGC 60.366 47.826 0.19 0.00 34.28 4.01
1890 1951 3.818773 TGCTATGCATCACCATGATCTTG 59.181 43.478 0.19 1.60 34.28 3.02
1891 1952 4.094830 TGCTATGCATCACCATGATCTT 57.905 40.909 0.19 0.00 34.28 2.40
1892 1953 3.782656 TGCTATGCATCACCATGATCT 57.217 42.857 0.19 0.00 34.28 2.75
1893 1954 4.457949 TCATTGCTATGCATCACCATGATC 59.542 41.667 0.19 0.00 38.76 2.92
1894 1955 4.403734 TCATTGCTATGCATCACCATGAT 58.596 39.130 0.19 0.00 38.76 2.45
1895 1956 3.818773 CTCATTGCTATGCATCACCATGA 59.181 43.478 0.19 8.77 38.76 3.07
1896 1957 3.818773 TCTCATTGCTATGCATCACCATG 59.181 43.478 0.19 4.57 38.76 3.66
1897 1958 4.072839 CTCTCATTGCTATGCATCACCAT 58.927 43.478 0.19 0.00 38.76 3.55
1898 1959 3.473625 CTCTCATTGCTATGCATCACCA 58.526 45.455 0.19 0.00 38.76 4.17
1899 1960 2.812591 CCTCTCATTGCTATGCATCACC 59.187 50.000 0.19 0.00 38.76 4.02
1900 1961 2.812591 CCCTCTCATTGCTATGCATCAC 59.187 50.000 0.19 0.00 38.76 3.06
1901 1962 2.224695 CCCCTCTCATTGCTATGCATCA 60.225 50.000 0.19 0.00 38.76 3.07
1902 1963 2.039480 TCCCCTCTCATTGCTATGCATC 59.961 50.000 0.19 0.00 38.76 3.91
1903 1964 2.040012 CTCCCCTCTCATTGCTATGCAT 59.960 50.000 3.79 3.79 38.76 3.96
1904 1965 1.419012 CTCCCCTCTCATTGCTATGCA 59.581 52.381 3.00 0.00 36.47 3.96
1905 1966 1.696336 TCTCCCCTCTCATTGCTATGC 59.304 52.381 3.00 0.00 0.00 3.14
1906 1967 2.971330 ACTCTCCCCTCTCATTGCTATG 59.029 50.000 1.30 1.30 0.00 2.23
1907 1968 2.971330 CACTCTCCCCTCTCATTGCTAT 59.029 50.000 0.00 0.00 0.00 2.97
1908 1969 2.292521 ACACTCTCCCCTCTCATTGCTA 60.293 50.000 0.00 0.00 0.00 3.49
1909 1970 1.202330 CACTCTCCCCTCTCATTGCT 58.798 55.000 0.00 0.00 0.00 3.91
1910 1971 0.908198 ACACTCTCCCCTCTCATTGC 59.092 55.000 0.00 0.00 0.00 3.56
1911 1972 2.182827 TCACACTCTCCCCTCTCATTG 58.817 52.381 0.00 0.00 0.00 2.82
1912 1973 2.630889 TCACACTCTCCCCTCTCATT 57.369 50.000 0.00 0.00 0.00 2.57
1913 1974 2.247111 AGATCACACTCTCCCCTCTCAT 59.753 50.000 0.00 0.00 0.00 2.90
1914 1975 1.643286 AGATCACACTCTCCCCTCTCA 59.357 52.381 0.00 0.00 0.00 3.27
1915 1976 2.452600 AGATCACACTCTCCCCTCTC 57.547 55.000 0.00 0.00 0.00 3.20
1916 1977 2.422235 CGTAGATCACACTCTCCCCTCT 60.422 54.545 0.00 0.00 0.00 3.69
1917 1978 1.950909 CGTAGATCACACTCTCCCCTC 59.049 57.143 0.00 0.00 0.00 4.30
1918 1979 1.285373 ACGTAGATCACACTCTCCCCT 59.715 52.381 0.00 0.00 0.00 4.79
1919 1980 1.765230 ACGTAGATCACACTCTCCCC 58.235 55.000 0.00 0.00 0.00 4.81
1920 1981 2.617774 GGTACGTAGATCACACTCTCCC 59.382 54.545 0.00 0.00 0.00 4.30
1921 1982 2.617774 GGGTACGTAGATCACACTCTCC 59.382 54.545 0.00 0.00 0.00 3.71
1922 1983 3.543665 AGGGTACGTAGATCACACTCTC 58.456 50.000 0.00 0.00 0.00 3.20
1923 1984 3.648507 AGGGTACGTAGATCACACTCT 57.351 47.619 0.00 0.00 0.00 3.24
1924 1985 3.442977 ACAAGGGTACGTAGATCACACTC 59.557 47.826 0.00 0.00 0.00 3.51
1925 1986 3.428532 ACAAGGGTACGTAGATCACACT 58.571 45.455 0.00 0.00 0.00 3.55
1926 1987 3.863142 ACAAGGGTACGTAGATCACAC 57.137 47.619 0.00 0.00 0.00 3.82
1927 1988 4.637534 GTCTACAAGGGTACGTAGATCACA 59.362 45.833 10.36 0.00 44.32 3.58
1928 1989 4.036144 GGTCTACAAGGGTACGTAGATCAC 59.964 50.000 11.75 0.00 44.32 3.06
1929 1990 4.202441 GGTCTACAAGGGTACGTAGATCA 58.798 47.826 11.75 0.00 44.32 2.92
1930 1991 3.249559 CGGTCTACAAGGGTACGTAGATC 59.750 52.174 10.36 9.26 44.32 2.75
1931 1992 3.118261 TCGGTCTACAAGGGTACGTAGAT 60.118 47.826 10.36 0.00 44.32 1.98
1932 1993 2.236146 TCGGTCTACAAGGGTACGTAGA 59.764 50.000 0.00 4.74 41.32 2.59
1933 1994 2.352960 GTCGGTCTACAAGGGTACGTAG 59.647 54.545 0.00 0.00 37.12 3.51
1934 1995 2.290008 TGTCGGTCTACAAGGGTACGTA 60.290 50.000 0.00 0.00 0.00 3.57
1935 1996 1.168714 GTCGGTCTACAAGGGTACGT 58.831 55.000 0.00 0.00 0.00 3.57
1936 1997 1.131883 CTGTCGGTCTACAAGGGTACG 59.868 57.143 0.00 0.00 0.00 3.67
1937 1998 1.135170 GCTGTCGGTCTACAAGGGTAC 60.135 57.143 0.00 0.00 0.00 3.34
1938 1999 1.180029 GCTGTCGGTCTACAAGGGTA 58.820 55.000 0.00 0.00 0.00 3.69
1939 2000 1.874345 CGCTGTCGGTCTACAAGGGT 61.874 60.000 0.00 0.00 0.00 4.34
1940 2001 1.153823 CGCTGTCGGTCTACAAGGG 60.154 63.158 0.00 0.00 0.00 3.95
1941 2002 4.478195 CGCTGTCGGTCTACAAGG 57.522 61.111 0.00 0.00 0.00 3.61
1951 2012 2.789203 GCTAACGCTTCCGCTGTCG 61.789 63.158 0.00 0.00 38.22 4.35
1952 2013 1.736645 TGCTAACGCTTCCGCTGTC 60.737 57.895 0.00 0.00 38.22 3.51
1953 2014 2.027625 GTGCTAACGCTTCCGCTGT 61.028 57.895 0.00 0.00 38.22 4.40
1954 2015 1.565156 TTGTGCTAACGCTTCCGCTG 61.565 55.000 0.00 0.00 38.22 5.18
1955 2016 1.301401 TTGTGCTAACGCTTCCGCT 60.301 52.632 0.00 0.00 38.22 5.52
1956 2017 1.154469 GTTGTGCTAACGCTTCCGC 60.154 57.895 0.00 0.00 38.22 5.54
1957 2018 1.129809 CGTTGTGCTAACGCTTCCG 59.870 57.895 12.46 0.00 36.82 4.30
1963 2024 1.438059 CAACCGCGTTGTGCTAACG 60.438 57.895 18.25 18.25 45.56 3.18
1964 2025 0.515564 ATCAACCGCGTTGTGCTAAC 59.484 50.000 16.97 0.00 43.23 2.34
1965 2026 0.515127 CATCAACCGCGTTGTGCTAA 59.485 50.000 16.97 2.99 43.23 3.09
1966 2027 0.601576 ACATCAACCGCGTTGTGCTA 60.602 50.000 16.97 3.28 43.23 3.49
1967 2028 0.601576 TACATCAACCGCGTTGTGCT 60.602 50.000 16.97 6.88 43.23 4.40
1968 2029 0.179225 CTACATCAACCGCGTTGTGC 60.179 55.000 16.97 0.00 43.23 4.57
1969 2030 1.126113 GACTACATCAACCGCGTTGTG 59.874 52.381 16.97 15.92 43.23 3.33
1970 2031 1.425412 GACTACATCAACCGCGTTGT 58.575 50.000 16.97 9.99 43.23 3.32
1971 2032 0.365523 CGACTACATCAACCGCGTTG 59.634 55.000 4.92 10.14 43.99 4.10
1972 2033 0.038892 ACGACTACATCAACCGCGTT 60.039 50.000 4.92 0.00 0.00 4.84
1973 2034 0.804364 TACGACTACATCAACCGCGT 59.196 50.000 4.92 0.00 0.00 6.01
1974 2035 1.186030 GTACGACTACATCAACCGCG 58.814 55.000 0.00 0.00 0.00 6.46
1975 2036 1.186030 CGTACGACTACATCAACCGC 58.814 55.000 10.44 0.00 0.00 5.68
1976 2037 2.094894 AGACGTACGACTACATCAACCG 59.905 50.000 24.41 0.00 0.00 4.44
1977 2038 3.754188 AGACGTACGACTACATCAACC 57.246 47.619 24.41 0.00 0.00 3.77
1978 2039 4.552660 GTGAAGACGTACGACTACATCAAC 59.447 45.833 24.41 11.90 0.00 3.18
1979 2040 4.667415 CGTGAAGACGTACGACTACATCAA 60.667 45.833 24.41 4.49 42.54 2.57
1980 2041 3.181527 CGTGAAGACGTACGACTACATCA 60.182 47.826 24.41 18.00 42.54 3.07
1981 2042 3.340552 CGTGAAGACGTACGACTACATC 58.659 50.000 24.41 15.62 42.54 3.06
1982 2043 2.094894 CCGTGAAGACGTACGACTACAT 59.905 50.000 24.41 6.17 44.54 2.29
1983 2044 1.460743 CCGTGAAGACGTACGACTACA 59.539 52.381 24.41 13.28 44.54 2.74
1984 2045 1.788344 GCCGTGAAGACGTACGACTAC 60.788 57.143 24.41 15.53 44.54 2.73
1985 2046 0.443869 GCCGTGAAGACGTACGACTA 59.556 55.000 24.41 3.99 44.54 2.59
1986 2047 1.208614 GCCGTGAAGACGTACGACT 59.791 57.895 24.41 19.11 44.54 4.18
1987 2048 1.799121 GGCCGTGAAGACGTACGAC 60.799 63.158 24.41 16.77 44.54 4.34
1988 2049 2.562912 GGCCGTGAAGACGTACGA 59.437 61.111 24.41 0.00 44.54 3.43
1989 2050 2.505557 GGGCCGTGAAGACGTACG 60.506 66.667 15.01 15.01 44.54 3.67
1990 2051 2.505557 CGGGCCGTGAAGACGTAC 60.506 66.667 19.97 0.00 44.54 3.67
1991 2052 2.672651 TCGGGCCGTGAAGACGTA 60.673 61.111 27.32 0.00 44.54 3.57
1992 2053 4.353437 GTCGGGCCGTGAAGACGT 62.353 66.667 27.32 0.00 44.54 4.34
2002 2063 4.467084 TGCTTGATCGGTCGGGCC 62.467 66.667 9.60 0.00 0.00 5.80
2003 2064 3.195698 GTGCTTGATCGGTCGGGC 61.196 66.667 5.85 5.85 0.00 6.13
2004 2065 2.511600 GGTGCTTGATCGGTCGGG 60.512 66.667 0.00 0.00 0.00 5.14
2005 2066 2.829043 TTCGGTGCTTGATCGGTCGG 62.829 60.000 0.00 0.00 0.00 4.79
2006 2067 1.011968 TTTCGGTGCTTGATCGGTCG 61.012 55.000 0.00 0.00 0.00 4.79
2007 2068 0.442699 GTTTCGGTGCTTGATCGGTC 59.557 55.000 0.00 0.00 0.00 4.79
2008 2069 0.034896 AGTTTCGGTGCTTGATCGGT 59.965 50.000 0.00 0.00 0.00 4.69
2009 2070 1.659098 GTAGTTTCGGTGCTTGATCGG 59.341 52.381 0.00 0.00 0.00 4.18
2010 2071 1.320555 CGTAGTTTCGGTGCTTGATCG 59.679 52.381 0.00 0.00 0.00 3.69
2011 2072 1.659098 CCGTAGTTTCGGTGCTTGATC 59.341 52.381 0.00 0.00 44.77 2.92
2012 2073 1.722011 CCGTAGTTTCGGTGCTTGAT 58.278 50.000 0.00 0.00 44.77 2.57
2013 2074 3.204505 CCGTAGTTTCGGTGCTTGA 57.795 52.632 0.00 0.00 44.77 3.02
2021 2082 4.180496 GGAGGTGCCGTAGTTTCG 57.820 61.111 0.00 0.00 0.00 3.46
2030 2091 1.142097 GCTAGAACTCGGAGGTGCC 59.858 63.158 10.23 0.00 0.00 5.01
2031 2092 0.458716 GTGCTAGAACTCGGAGGTGC 60.459 60.000 10.23 3.39 0.00 5.01
2032 2093 0.888619 TGTGCTAGAACTCGGAGGTG 59.111 55.000 10.23 0.00 0.00 4.00
2033 2094 0.889306 GTGTGCTAGAACTCGGAGGT 59.111 55.000 10.23 1.51 0.00 3.85
2034 2095 0.179161 CGTGTGCTAGAACTCGGAGG 60.179 60.000 16.08 0.00 34.36 4.30
2035 2096 0.522180 ACGTGTGCTAGAACTCGGAG 59.478 55.000 24.99 2.83 40.39 4.63
2036 2097 0.956633 AACGTGTGCTAGAACTCGGA 59.043 50.000 24.99 0.00 40.39 4.55
2037 2098 1.335597 TGAACGTGTGCTAGAACTCGG 60.336 52.381 24.99 10.58 40.39 4.63
2038 2099 1.979469 CTGAACGTGTGCTAGAACTCG 59.021 52.381 21.00 21.00 41.49 4.18
2039 2100 1.721926 GCTGAACGTGTGCTAGAACTC 59.278 52.381 1.64 0.00 0.00 3.01
2040 2101 1.341531 AGCTGAACGTGTGCTAGAACT 59.658 47.619 1.64 0.00 35.05 3.01
2041 2102 1.721926 GAGCTGAACGTGTGCTAGAAC 59.278 52.381 9.63 0.00 37.16 3.01
2042 2103 1.666023 CGAGCTGAACGTGTGCTAGAA 60.666 52.381 9.63 0.00 37.16 2.10
2043 2104 0.109735 CGAGCTGAACGTGTGCTAGA 60.110 55.000 9.63 0.00 37.16 2.43
2044 2105 0.109735 TCGAGCTGAACGTGTGCTAG 60.110 55.000 9.63 9.87 37.16 3.42
2045 2106 0.526211 ATCGAGCTGAACGTGTGCTA 59.474 50.000 9.63 0.00 37.16 3.49
2046 2107 1.010935 CATCGAGCTGAACGTGTGCT 61.011 55.000 9.46 9.46 40.02 4.40
2047 2108 1.008875 TCATCGAGCTGAACGTGTGC 61.009 55.000 0.00 0.00 0.00 4.57
2048 2109 0.710567 GTCATCGAGCTGAACGTGTG 59.289 55.000 0.00 0.00 0.00 3.82
2049 2110 0.729478 CGTCATCGAGCTGAACGTGT 60.729 55.000 0.00 0.00 39.71 4.49
2050 2111 0.454452 TCGTCATCGAGCTGAACGTG 60.454 55.000 0.00 0.00 41.35 4.49
2051 2112 1.873863 TCGTCATCGAGCTGAACGT 59.126 52.632 0.00 0.00 41.35 3.99
2052 2113 4.765611 TCGTCATCGAGCTGAACG 57.234 55.556 0.00 0.00 41.35 3.95
2061 2122 2.131294 GAGTCCGGGGATCGTCATCG 62.131 65.000 0.00 0.00 37.11 3.84
2062 2123 1.660917 GAGTCCGGGGATCGTCATC 59.339 63.158 0.00 0.00 37.11 2.92
2063 2124 1.833049 GGAGTCCGGGGATCGTCAT 60.833 63.158 0.00 0.00 37.11 3.06
2064 2125 2.441532 GGAGTCCGGGGATCGTCA 60.442 66.667 0.00 0.00 37.11 4.35
2065 2126 3.593794 CGGAGTCCGGGGATCGTC 61.594 72.222 24.39 0.00 44.15 4.20
2075 2136 0.250513 ACTTTGCTGGATCGGAGTCC 59.749 55.000 0.00 0.00 38.81 3.85
2076 2137 1.338200 ACACTTTGCTGGATCGGAGTC 60.338 52.381 0.00 0.00 0.00 3.36
2077 2138 0.687354 ACACTTTGCTGGATCGGAGT 59.313 50.000 0.00 0.00 0.00 3.85
2078 2139 1.363744 GACACTTTGCTGGATCGGAG 58.636 55.000 0.00 0.00 0.00 4.63
2079 2140 0.389817 CGACACTTTGCTGGATCGGA 60.390 55.000 0.00 0.00 0.00 4.55
2080 2141 1.361668 CCGACACTTTGCTGGATCGG 61.362 60.000 0.00 0.00 42.69 4.18
2081 2142 1.361668 CCCGACACTTTGCTGGATCG 61.362 60.000 0.00 0.00 0.00 3.69
2082 2143 1.026718 CCCCGACACTTTGCTGGATC 61.027 60.000 0.00 0.00 0.00 3.36
2083 2144 1.002134 CCCCGACACTTTGCTGGAT 60.002 57.895 0.00 0.00 0.00 3.41
2084 2145 1.701031 TTCCCCGACACTTTGCTGGA 61.701 55.000 0.00 0.00 0.00 3.86
2085 2146 1.228124 TTCCCCGACACTTTGCTGG 60.228 57.895 0.00 0.00 0.00 4.85
2086 2147 0.250295 TCTTCCCCGACACTTTGCTG 60.250 55.000 0.00 0.00 0.00 4.41
2087 2148 0.472471 TTCTTCCCCGACACTTTGCT 59.528 50.000 0.00 0.00 0.00 3.91
2088 2149 1.534729 ATTCTTCCCCGACACTTTGC 58.465 50.000 0.00 0.00 0.00 3.68
2089 2150 2.488153 GGAATTCTTCCCCGACACTTTG 59.512 50.000 5.23 0.00 44.30 2.77
2090 2151 2.791655 GGAATTCTTCCCCGACACTTT 58.208 47.619 5.23 0.00 44.30 2.66
2091 2152 2.491675 GGAATTCTTCCCCGACACTT 57.508 50.000 5.23 0.00 44.30 3.16
2100 2161 0.721718 CGTGCTGACGGAATTCTTCC 59.278 55.000 5.23 0.00 46.62 3.46
2101 2162 1.390463 GTCGTGCTGACGGAATTCTTC 59.610 52.381 5.23 3.22 46.11 2.87
2102 2163 1.429463 GTCGTGCTGACGGAATTCTT 58.571 50.000 5.23 0.00 46.11 2.52
2103 2164 3.123674 GTCGTGCTGACGGAATTCT 57.876 52.632 5.23 0.00 46.11 2.40
2118 2179 4.771356 ATCGTCACCACGCCGTCG 62.771 66.667 0.00 0.00 46.28 5.12
2119 2180 2.814183 AAGATCGTCACCACGCCGTC 62.814 60.000 0.00 0.00 46.28 4.79
2120 2181 2.927580 AAGATCGTCACCACGCCGT 61.928 57.895 0.00 0.00 46.28 5.68
2121 2182 2.126071 AAGATCGTCACCACGCCG 60.126 61.111 0.00 0.00 46.28 6.46
2122 2183 0.460284 ATCAAGATCGTCACCACGCC 60.460 55.000 0.00 0.00 46.28 5.68
2123 2184 0.647410 CATCAAGATCGTCACCACGC 59.353 55.000 0.00 0.00 46.28 5.34
2125 2186 4.111375 AGTACATCAAGATCGTCACCAC 57.889 45.455 0.00 0.00 0.00 4.16
2126 2187 4.097437 GGTAGTACATCAAGATCGTCACCA 59.903 45.833 2.06 0.00 0.00 4.17
2127 2188 4.608951 GGTAGTACATCAAGATCGTCACC 58.391 47.826 2.06 0.00 0.00 4.02
2128 2189 4.201891 ACGGTAGTACATCAAGATCGTCAC 60.202 45.833 2.06 0.00 0.00 3.67
2129 2190 3.943381 ACGGTAGTACATCAAGATCGTCA 59.057 43.478 2.06 0.00 0.00 4.35
2130 2191 4.525686 GACGGTAGTACATCAAGATCGTC 58.474 47.826 2.06 5.77 37.81 4.20
2131 2192 3.002042 CGACGGTAGTACATCAAGATCGT 59.998 47.826 2.06 0.00 0.00 3.73
2132 2193 3.542690 CGACGGTAGTACATCAAGATCG 58.457 50.000 2.06 0.00 0.00 3.69
2133 2194 3.242969 TGCGACGGTAGTACATCAAGATC 60.243 47.826 2.06 0.00 0.00 2.75
2134 2195 2.686405 TGCGACGGTAGTACATCAAGAT 59.314 45.455 2.06 0.00 0.00 2.40
2135 2196 2.086094 TGCGACGGTAGTACATCAAGA 58.914 47.619 2.06 0.00 0.00 3.02
2136 2197 2.451132 CTGCGACGGTAGTACATCAAG 58.549 52.381 2.06 0.00 0.00 3.02
2137 2198 1.133598 CCTGCGACGGTAGTACATCAA 59.866 52.381 2.06 0.00 0.00 2.57
2138 2199 0.736636 CCTGCGACGGTAGTACATCA 59.263 55.000 2.06 0.00 0.00 3.07
2139 2200 0.030369 CCCTGCGACGGTAGTACATC 59.970 60.000 2.06 0.00 0.00 3.06
2140 2201 2.012902 GCCCTGCGACGGTAGTACAT 62.013 60.000 2.06 0.00 0.00 2.29
2141 2202 2.703798 GCCCTGCGACGGTAGTACA 61.704 63.158 2.06 0.00 0.00 2.90
2142 2203 1.941999 AAGCCCTGCGACGGTAGTAC 61.942 60.000 0.00 0.00 0.00 2.73
2143 2204 1.660560 GAAGCCCTGCGACGGTAGTA 61.661 60.000 0.00 0.00 0.00 1.82
2144 2205 2.995574 AAGCCCTGCGACGGTAGT 60.996 61.111 0.00 0.00 0.00 2.73
2145 2206 2.202756 GAAGCCCTGCGACGGTAG 60.203 66.667 0.00 0.00 0.00 3.18
2146 2207 4.124351 CGAAGCCCTGCGACGGTA 62.124 66.667 0.00 0.00 0.00 4.02
2159 2220 1.141019 TAGCGGTGCTTAGGCGAAG 59.859 57.895 2.68 2.68 40.44 3.79
2160 2221 1.153706 GTAGCGGTGCTTAGGCGAA 60.154 57.895 0.00 0.00 40.44 4.70
2161 2222 1.879737 TTGTAGCGGTGCTTAGGCGA 61.880 55.000 3.95 0.00 40.44 5.54
2162 2223 0.810031 ATTGTAGCGGTGCTTAGGCG 60.810 55.000 3.95 0.00 40.44 5.52
2163 2224 2.234300 TATTGTAGCGGTGCTTAGGC 57.766 50.000 3.95 0.00 40.44 3.93
2164 2225 5.288712 CGATAATATTGTAGCGGTGCTTAGG 59.711 44.000 3.95 0.00 40.44 2.69
2165 2226 6.090783 TCGATAATATTGTAGCGGTGCTTAG 58.909 40.000 3.95 0.00 40.44 2.18
2166 2227 6.016213 TCGATAATATTGTAGCGGTGCTTA 57.984 37.500 3.95 0.00 40.44 3.09
2167 2228 4.878439 TCGATAATATTGTAGCGGTGCTT 58.122 39.130 3.95 0.00 40.44 3.91
2168 2229 4.486090 CTCGATAATATTGTAGCGGTGCT 58.514 43.478 3.95 0.00 43.41 4.40
2169 2230 3.612860 CCTCGATAATATTGTAGCGGTGC 59.387 47.826 0.00 0.00 33.79 5.01
2170 2231 5.055642 TCCTCGATAATATTGTAGCGGTG 57.944 43.478 0.00 0.00 33.79 4.94
2171 2232 5.916661 ATCCTCGATAATATTGTAGCGGT 57.083 39.130 0.00 0.00 33.79 5.68
2172 2233 7.382488 CCATAATCCTCGATAATATTGTAGCGG 59.618 40.741 0.00 0.00 33.79 5.52
2173 2234 7.921214 ACCATAATCCTCGATAATATTGTAGCG 59.079 37.037 0.00 0.00 34.27 4.26
2174 2235 9.035607 CACCATAATCCTCGATAATATTGTAGC 57.964 37.037 0.00 0.00 0.00 3.58
2175 2236 9.534565 CCACCATAATCCTCGATAATATTGTAG 57.465 37.037 0.00 0.00 0.00 2.74
2176 2237 9.262240 TCCACCATAATCCTCGATAATATTGTA 57.738 33.333 0.00 0.00 0.00 2.41
2177 2238 8.146053 TCCACCATAATCCTCGATAATATTGT 57.854 34.615 0.00 0.00 0.00 2.71
2178 2239 9.102757 CTTCCACCATAATCCTCGATAATATTG 57.897 37.037 0.00 0.00 0.00 1.90
2179 2240 8.267894 CCTTCCACCATAATCCTCGATAATATT 58.732 37.037 0.00 0.00 0.00 1.28
2180 2241 7.147479 CCCTTCCACCATAATCCTCGATAATAT 60.147 40.741 0.00 0.00 0.00 1.28
2181 2242 6.156256 CCCTTCCACCATAATCCTCGATAATA 59.844 42.308 0.00 0.00 0.00 0.98
2182 2243 5.045578 CCCTTCCACCATAATCCTCGATAAT 60.046 44.000 0.00 0.00 0.00 1.28
2183 2244 4.286032 CCCTTCCACCATAATCCTCGATAA 59.714 45.833 0.00 0.00 0.00 1.75
2184 2245 3.838317 CCCTTCCACCATAATCCTCGATA 59.162 47.826 0.00 0.00 0.00 2.92
2185 2246 2.639839 CCCTTCCACCATAATCCTCGAT 59.360 50.000 0.00 0.00 0.00 3.59
2186 2247 2.047061 CCCTTCCACCATAATCCTCGA 58.953 52.381 0.00 0.00 0.00 4.04
2187 2248 1.072331 CCCCTTCCACCATAATCCTCG 59.928 57.143 0.00 0.00 0.00 4.63
2188 2249 1.425448 CCCCCTTCCACCATAATCCTC 59.575 57.143 0.00 0.00 0.00 3.71
2189 2250 1.534338 CCCCCTTCCACCATAATCCT 58.466 55.000 0.00 0.00 0.00 3.24
2190 2251 0.178961 GCCCCCTTCCACCATAATCC 60.179 60.000 0.00 0.00 0.00 3.01
2191 2252 0.555769 TGCCCCCTTCCACCATAATC 59.444 55.000 0.00 0.00 0.00 1.75
2192 2253 0.261696 GTGCCCCCTTCCACCATAAT 59.738 55.000 0.00 0.00 0.00 1.28
2193 2254 1.694856 GTGCCCCCTTCCACCATAA 59.305 57.895 0.00 0.00 0.00 1.90
2194 2255 3.422204 GTGCCCCCTTCCACCATA 58.578 61.111 0.00 0.00 0.00 2.74
2213 2274 4.058124 TGATCATATTCTTAGCCGTGTGC 58.942 43.478 0.00 0.00 41.71 4.57
2214 2275 4.148871 CGTGATCATATTCTTAGCCGTGTG 59.851 45.833 0.00 0.00 0.00 3.82
2215 2276 4.202121 ACGTGATCATATTCTTAGCCGTGT 60.202 41.667 0.00 0.00 0.00 4.49
2216 2277 4.148871 CACGTGATCATATTCTTAGCCGTG 59.851 45.833 10.90 11.91 36.46 4.94
2217 2278 4.299155 CACGTGATCATATTCTTAGCCGT 58.701 43.478 10.90 0.00 0.00 5.68
2218 2279 3.675225 CCACGTGATCATATTCTTAGCCG 59.325 47.826 19.30 0.00 0.00 5.52
2219 2280 4.883083 TCCACGTGATCATATTCTTAGCC 58.117 43.478 19.30 0.00 0.00 3.93
2232 2293 3.067106 GACACAAGTTGATCCACGTGAT 58.933 45.455 19.30 8.71 36.01 3.06
2233 2294 2.102420 AGACACAAGTTGATCCACGTGA 59.898 45.455 19.30 3.36 31.33 4.35
2234 2295 2.483876 AGACACAAGTTGATCCACGTG 58.516 47.619 10.54 9.08 32.90 4.49
2235 2296 2.910688 AGACACAAGTTGATCCACGT 57.089 45.000 10.54 0.00 0.00 4.49
2236 2297 3.254060 CCTAGACACAAGTTGATCCACG 58.746 50.000 10.54 0.00 0.00 4.94
2237 2298 3.600388 CCCTAGACACAAGTTGATCCAC 58.400 50.000 10.54 0.00 0.00 4.02
2238 2299 2.571653 CCCCTAGACACAAGTTGATCCA 59.428 50.000 10.54 0.00 0.00 3.41
2239 2300 2.572104 ACCCCTAGACACAAGTTGATCC 59.428 50.000 10.54 0.00 0.00 3.36
2240 2301 3.600388 CACCCCTAGACACAAGTTGATC 58.400 50.000 10.54 6.82 0.00 2.92
2241 2302 2.290323 GCACCCCTAGACACAAGTTGAT 60.290 50.000 10.54 0.00 0.00 2.57
2242 2303 1.071699 GCACCCCTAGACACAAGTTGA 59.928 52.381 10.54 0.00 0.00 3.18
2243 2304 1.523758 GCACCCCTAGACACAAGTTG 58.476 55.000 0.00 0.00 0.00 3.16
2244 2305 0.400594 GGCACCCCTAGACACAAGTT 59.599 55.000 0.00 0.00 0.00 2.66
2245 2306 2.067197 GGCACCCCTAGACACAAGT 58.933 57.895 0.00 0.00 0.00 3.16
2262 2323 0.548197 TTATATACGGGGGCAGGGGG 60.548 60.000 0.00 0.00 0.00 5.40
2263 2324 1.280998 CTTTATATACGGGGGCAGGGG 59.719 57.143 0.00 0.00 0.00 4.79
2264 2325 1.280998 CCTTTATATACGGGGGCAGGG 59.719 57.143 0.00 0.00 0.00 4.45
2265 2326 2.262637 TCCTTTATATACGGGGGCAGG 58.737 52.381 0.00 0.00 0.00 4.85
2266 2327 4.569719 ATTCCTTTATATACGGGGGCAG 57.430 45.455 0.00 0.00 0.00 4.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.