Multiple sequence alignment - TraesCS2A01G567700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G567700 chr2A 100.000 3447 0 0 1 3447 766444621 766448067 0.000000e+00 6366.0
1 TraesCS2A01G567700 chr2A 88.485 660 53 13 1848 2485 735600987 735600329 0.000000e+00 776.0
2 TraesCS2A01G567700 chr2A 88.836 627 47 13 1848 2452 735763135 735763760 0.000000e+00 749.0
3 TraesCS2A01G567700 chr2A 87.619 630 57 8 1841 2449 735701714 735701085 0.000000e+00 712.0
4 TraesCS2A01G567700 chr2A 90.020 501 39 5 985 1483 735602884 735602393 3.750000e-179 638.0
5 TraesCS2A01G567700 chr2A 92.457 411 31 0 996 1406 735761442 735761852 3.830000e-164 588.0
6 TraesCS2A01G567700 chr2A 83.648 159 12 9 2544 2691 735600307 735600152 1.670000e-28 137.0
7 TraesCS2A01G567700 chr2D 92.726 1086 40 13 365 1441 641182824 641183879 0.000000e+00 1531.0
8 TraesCS2A01G567700 chr2D 94.118 663 32 3 1845 2506 641184256 641184912 0.000000e+00 1002.0
9 TraesCS2A01G567700 chr2D 85.480 854 69 29 1884 2702 603379355 603378522 0.000000e+00 839.0
10 TraesCS2A01G567700 chr2D 89.137 626 47 3 1848 2452 603542765 603543390 0.000000e+00 760.0
11 TraesCS2A01G567700 chr2D 87.981 624 54 3 1848 2450 603401114 603400491 0.000000e+00 717.0
12 TraesCS2A01G567700 chr2D 87.480 631 58 8 1841 2450 603501275 603500645 0.000000e+00 708.0
13 TraesCS2A01G567700 chr2D 93.088 434 30 0 973 1406 603402989 603402556 1.350000e-178 636.0
14 TraesCS2A01G567700 chr2D 89.243 502 36 10 996 1483 603541118 603541615 2.270000e-171 612.0
15 TraesCS2A01G567700 chr2D 92.611 406 30 0 996 1401 603502829 603502424 4.960000e-163 584.0
16 TraesCS2A01G567700 chr2D 91.971 411 33 0 996 1406 603381048 603380638 8.300000e-161 577.0
17 TraesCS2A01G567700 chr2D 93.772 289 17 1 33 320 641181071 641181359 1.900000e-117 433.0
18 TraesCS2A01G567700 chr2D 96.629 89 3 0 1439 1527 641184100 641184188 7.710000e-32 148.0
19 TraesCS2A01G567700 chr2D 92.473 93 6 1 2561 2653 641184910 641185001 7.760000e-27 132.0
20 TraesCS2A01G567700 chr2D 92.683 41 3 0 2869 2909 13199219 13199179 3.720000e-05 60.2
21 TraesCS2A01G567700 chr2B 83.676 876 76 30 1848 2691 733859680 733858840 0.000000e+00 763.0
22 TraesCS2A01G567700 chr2B 88.179 626 53 10 1848 2452 733971411 733970786 0.000000e+00 726.0
23 TraesCS2A01G567700 chr2B 87.981 624 54 10 1841 2443 734049237 734048614 0.000000e+00 717.0
24 TraesCS2A01G567700 chr2B 90.408 490 38 7 997 1483 733892237 733891754 1.350000e-178 636.0
25 TraesCS2A01G567700 chr2B 88.730 488 47 7 1000 1483 733862856 733862373 1.070000e-164 590.0
26 TraesCS2A01G567700 chr2B 80.843 261 26 14 33 292 800178085 800177848 2.110000e-42 183.0
27 TraesCS2A01G567700 chr1D 93.137 306 18 2 2859 3164 241242026 241241724 2.440000e-121 446.0
28 TraesCS2A01G567700 chr1D 87.121 264 11 5 3183 3441 241241740 241241495 9.420000e-71 278.0
29 TraesCS2A01G567700 chr3A 88.362 232 19 5 1589 1818 74675203 74674978 4.380000e-69 272.0
30 TraesCS2A01G567700 chr3A 83.401 247 31 6 1586 1830 705930052 705930290 1.610000e-53 220.0
31 TraesCS2A01G567700 chr5B 86.831 243 26 5 1589 1830 467383219 467382982 2.040000e-67 267.0
32 TraesCS2A01G567700 chrUn 85.306 245 30 4 1587 1830 96941062 96940823 7.390000e-62 248.0
33 TraesCS2A01G567700 chrUn 83.402 241 33 6 1591 1830 356065020 356065254 2.080000e-52 217.0
34 TraesCS2A01G567700 chrUn 83.402 241 33 6 1591 1830 419940966 419941200 2.080000e-52 217.0
35 TraesCS2A01G567700 chrUn 93.333 60 3 1 2794 2853 87482553 87482611 1.700000e-13 87.9
36 TraesCS2A01G567700 chr7A 83.402 241 33 6 1591 1830 679387402 679387168 2.080000e-52 217.0
37 TraesCS2A01G567700 chr7A 83.406 229 32 5 1591 1818 679375934 679375711 1.250000e-49 207.0
38 TraesCS2A01G567700 chr7A 82.573 241 35 6 1591 1830 679361287 679361053 4.510000e-49 206.0
39 TraesCS2A01G567700 chr4A 91.549 71 4 2 2784 2853 500887188 500887119 2.830000e-16 97.1
40 TraesCS2A01G567700 chr4A 91.667 60 4 1 2794 2853 334740491 334740433 7.930000e-12 82.4
41 TraesCS2A01G567700 chr5D 89.706 68 4 3 2787 2853 204684664 204684729 2.200000e-12 84.2
42 TraesCS2A01G567700 chr7D 90.625 64 3 2 2790 2853 12846083 12846023 7.930000e-12 82.4
43 TraesCS2A01G567700 chr7B 94.231 52 1 2 2794 2845 381909695 381909646 1.030000e-10 78.7
44 TraesCS2A01G567700 chr5A 94.231 52 1 2 2794 2845 691991459 691991508 1.030000e-10 78.7
45 TraesCS2A01G567700 chr1A 90.164 61 3 2 2793 2853 435731713 435731770 3.690000e-10 76.8
46 TraesCS2A01G567700 chr1A 90.000 60 3 2 2794 2853 376829175 376829119 1.330000e-09 75.0
47 TraesCS2A01G567700 chr1B 83.117 77 9 4 139 212 547182232 547182307 2.220000e-07 67.6
48 TraesCS2A01G567700 chr1B 83.117 77 7 5 139 211 547040199 547040273 7.990000e-07 65.8
49 TraesCS2A01G567700 chr6D 95.122 41 2 0 2869 2909 335061600 335061560 7.990000e-07 65.8
50 TraesCS2A01G567700 chr6D 95.122 41 2 0 2869 2909 454663111 454663151 7.990000e-07 65.8
51 TraesCS2A01G567700 chr3D 95.122 41 2 0 2869 2909 559132032 559131992 7.990000e-07 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G567700 chr2A 766444621 766448067 3446 False 6366.0 6366 100.000000 1 3447 1 chr2A.!!$F1 3446
1 TraesCS2A01G567700 chr2A 735701085 735701714 629 True 712.0 712 87.619000 1841 2449 1 chr2A.!!$R1 608
2 TraesCS2A01G567700 chr2A 735761442 735763760 2318 False 668.5 749 90.646500 996 2452 2 chr2A.!!$F2 1456
3 TraesCS2A01G567700 chr2A 735600152 735602884 2732 True 517.0 776 87.384333 985 2691 3 chr2A.!!$R2 1706
4 TraesCS2A01G567700 chr2D 603378522 603381048 2526 True 708.0 839 88.725500 996 2702 2 chr2D.!!$R2 1706
5 TraesCS2A01G567700 chr2D 603541118 603543390 2272 False 686.0 760 89.190000 996 2452 2 chr2D.!!$F1 1456
6 TraesCS2A01G567700 chr2D 603400491 603402989 2498 True 676.5 717 90.534500 973 2450 2 chr2D.!!$R3 1477
7 TraesCS2A01G567700 chr2D 641181071 641185001 3930 False 649.2 1531 93.943600 33 2653 5 chr2D.!!$F2 2620
8 TraesCS2A01G567700 chr2D 603500645 603502829 2184 True 646.0 708 90.045500 996 2450 2 chr2D.!!$R4 1454
9 TraesCS2A01G567700 chr2B 733970786 733971411 625 True 726.0 726 88.179000 1848 2452 1 chr2B.!!$R2 604
10 TraesCS2A01G567700 chr2B 734048614 734049237 623 True 717.0 717 87.981000 1841 2443 1 chr2B.!!$R3 602
11 TraesCS2A01G567700 chr2B 733858840 733862856 4016 True 676.5 763 86.203000 1000 2691 2 chr2B.!!$R5 1691
12 TraesCS2A01G567700 chr1D 241241495 241242026 531 True 362.0 446 90.129000 2859 3441 2 chr1D.!!$R1 582

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
271 272 0.179084 CGGGCCAAGTCGTATGTGAT 60.179 55.0 4.39 0.0 0.00 3.06 F
1620 6655 0.094730 CGTGGGAGAAACGATTTCGC 59.905 55.0 0.00 0.0 43.68 4.70 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1653 6688 0.034574 TTGCCGTGATTGCCCACTAT 60.035 50.0 0.00 0.0 35.02 2.12 R
2519 7580 0.032952 ACACGTACGCATGGACACTT 59.967 50.0 16.72 0.0 0.00 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 4.748503 CGCGACACGTTCTATAAATTGA 57.251 40.909 0.00 0.00 36.87 2.57
29 30 4.737598 CGCGACACGTTCTATAAATTGAG 58.262 43.478 0.00 0.00 36.87 3.02
30 31 4.497966 CGCGACACGTTCTATAAATTGAGA 59.502 41.667 0.00 0.00 36.87 3.27
31 32 5.330866 CGCGACACGTTCTATAAATTGAGAG 60.331 44.000 0.00 0.00 36.87 3.20
32 33 5.742453 GCGACACGTTCTATAAATTGAGAGA 59.258 40.000 0.00 0.00 0.00 3.10
33 34 6.075310 GCGACACGTTCTATAAATTGAGAGAG 60.075 42.308 0.00 0.00 0.00 3.20
34 35 6.967767 CGACACGTTCTATAAATTGAGAGAGT 59.032 38.462 0.00 0.00 0.00 3.24
35 36 8.121086 CGACACGTTCTATAAATTGAGAGAGTA 58.879 37.037 0.00 0.00 0.00 2.59
36 37 9.784680 GACACGTTCTATAAATTGAGAGAGTAA 57.215 33.333 0.00 0.00 0.00 2.24
37 38 9.570488 ACACGTTCTATAAATTGAGAGAGTAAC 57.430 33.333 0.00 0.00 0.00 2.50
71 72 5.794894 CTGAAACAACTACTCCTACATGGT 58.205 41.667 0.00 0.00 37.07 3.55
72 73 6.573680 GCTGAAACAACTACTCCTACATGGTA 60.574 42.308 0.00 0.00 37.07 3.25
109 110 4.458295 GGAGATTGATTATGCCATGTGAGG 59.542 45.833 0.00 0.00 0.00 3.86
116 117 5.657745 TGATTATGCCATGTGAGGATGTTTT 59.342 36.000 0.00 0.00 0.00 2.43
184 185 8.452534 GCTCATGATGATTCTCTGGATTAATTC 58.547 37.037 0.00 0.00 0.00 2.17
242 243 7.781277 GGTACGTACTCTGTTTTTGTAAGAAG 58.219 38.462 24.07 0.00 0.00 2.85
271 272 0.179084 CGGGCCAAGTCGTATGTGAT 60.179 55.000 4.39 0.00 0.00 3.06
294 295 2.287915 CACCGTAGCTGATAATGGCAAC 59.712 50.000 0.00 0.00 0.00 4.17
296 297 1.526887 CGTAGCTGATAATGGCAACGG 59.473 52.381 0.00 0.00 42.51 4.44
297 298 1.264288 GTAGCTGATAATGGCAACGGC 59.736 52.381 0.00 0.37 42.51 5.68
312 313 3.772932 CAACGGCATTTCAGCACATAAT 58.227 40.909 0.00 0.00 35.83 1.28
320 321 9.838975 CGGCATTTCAGCACATAATAATAATAA 57.161 29.630 0.00 0.00 35.83 1.40
428 1849 1.401539 GGCTCGTCAAGACAAAATGGC 60.402 52.381 0.72 0.00 30.88 4.40
517 1942 4.927557 TGGCAACAGCTGGAACAT 57.072 50.000 19.93 0.00 46.17 2.71
518 1943 2.343506 TGGCAACAGCTGGAACATG 58.656 52.632 19.93 9.69 46.17 3.21
556 1981 3.420893 TGGCAACCGAGATTGATTTTCT 58.579 40.909 0.00 0.00 0.00 2.52
608 2033 7.147143 TCATCTGCTCTACTCCGTATTAATC 57.853 40.000 0.00 0.00 0.00 1.75
618 2043 2.557056 TCCGTATTAATCTGAGGCCTCG 59.443 50.000 27.43 21.01 0.00 4.63
676 2101 1.068281 CTGGTCTGATCTCCATCACGG 59.932 57.143 0.00 0.00 33.80 4.94
677 2102 1.341976 TGGTCTGATCTCCATCACGGA 60.342 52.381 0.00 0.00 43.61 4.69
722 2147 5.989477 TCGTCAATGGGAAAGTTCATCTAT 58.011 37.500 0.00 0.00 0.00 1.98
723 2148 7.119709 TCGTCAATGGGAAAGTTCATCTATA 57.880 36.000 0.00 0.00 0.00 1.31
724 2149 7.735917 TCGTCAATGGGAAAGTTCATCTATAT 58.264 34.615 0.00 0.00 0.00 0.86
725 2150 8.866093 TCGTCAATGGGAAAGTTCATCTATATA 58.134 33.333 0.00 0.00 0.00 0.86
726 2151 9.658799 CGTCAATGGGAAAGTTCATCTATATAT 57.341 33.333 0.00 0.00 0.00 0.86
833 2258 6.489700 TGGTAATTTGATGCCATATGAACGAT 59.510 34.615 3.65 0.00 0.00 3.73
834 2259 7.023575 GGTAATTTGATGCCATATGAACGATC 58.976 38.462 3.65 0.87 0.00 3.69
835 2260 5.633830 ATTTGATGCCATATGAACGATCC 57.366 39.130 3.65 0.00 0.00 3.36
836 2261 3.767902 TGATGCCATATGAACGATCCA 57.232 42.857 3.65 0.00 0.00 3.41
854 2279 3.040763 GAGCTCCATCGCCATCGC 61.041 66.667 0.87 0.00 35.26 4.58
856 2281 4.916293 GCTCCATCGCCATCGCCA 62.916 66.667 0.00 0.00 35.26 5.69
857 2282 2.031616 CTCCATCGCCATCGCCAT 59.968 61.111 0.00 0.00 35.26 4.40
858 2283 2.031012 TCCATCGCCATCGCCATC 59.969 61.111 0.00 0.00 35.26 3.51
859 2284 3.417224 CCATCGCCATCGCCATCG 61.417 66.667 0.00 0.00 35.26 3.84
860 2285 2.662857 CATCGCCATCGCCATCGT 60.663 61.111 0.00 0.00 36.96 3.73
861 2286 2.108976 ATCGCCATCGCCATCGTT 59.891 55.556 0.00 0.00 36.96 3.85
879 2304 0.984230 TTTCTCGTGGCTGATTCCCT 59.016 50.000 0.00 0.00 0.00 4.20
890 2315 4.019681 TGGCTGATTCCCTATAAATACCGG 60.020 45.833 0.00 0.00 0.00 5.28
891 2316 4.224370 GGCTGATTCCCTATAAATACCGGA 59.776 45.833 9.46 0.00 0.00 5.14
892 2317 5.420409 GCTGATTCCCTATAAATACCGGAG 58.580 45.833 9.46 0.00 0.00 4.63
893 2318 5.416271 TGATTCCCTATAAATACCGGAGC 57.584 43.478 9.46 0.00 0.00 4.70
894 2319 3.947910 TTCCCTATAAATACCGGAGCG 57.052 47.619 9.46 0.00 0.00 5.03
909 2334 0.933097 GAGCGCGCCATATATCCATG 59.067 55.000 30.33 0.00 0.00 3.66
930 2355 1.867233 CCTTCTTCTCCAACACACACG 59.133 52.381 0.00 0.00 0.00 4.49
939 2364 1.202132 CCAACACACACGAACCAACAG 60.202 52.381 0.00 0.00 0.00 3.16
940 2365 1.735018 CAACACACACGAACCAACAGA 59.265 47.619 0.00 0.00 0.00 3.41
941 2366 2.325583 ACACACACGAACCAACAGAT 57.674 45.000 0.00 0.00 0.00 2.90
942 2367 2.210116 ACACACACGAACCAACAGATC 58.790 47.619 0.00 0.00 0.00 2.75
958 2383 3.993081 ACAGATCGAGCAACAAGAAAGAG 59.007 43.478 2.38 0.00 0.00 2.85
1059 2484 4.754667 GACCCGAACCTGCCGGTC 62.755 72.222 1.90 0.00 44.73 4.79
1412 2886 5.466728 GCGAGCAGGTAATGAATTGAGATTA 59.533 40.000 0.00 0.00 0.00 1.75
1413 2887 6.347240 GCGAGCAGGTAATGAATTGAGATTAG 60.347 42.308 0.00 0.00 0.00 1.73
1415 2889 7.116090 CGAGCAGGTAATGAATTGAGATTAGAG 59.884 40.741 0.00 0.00 0.00 2.43
1416 2890 8.027524 AGCAGGTAATGAATTGAGATTAGAGA 57.972 34.615 0.00 0.00 0.00 3.10
1417 2891 8.489489 AGCAGGTAATGAATTGAGATTAGAGAA 58.511 33.333 0.00 0.00 0.00 2.87
1418 2892 8.772705 GCAGGTAATGAATTGAGATTAGAGAAG 58.227 37.037 0.00 0.00 0.00 2.85
1532 6556 9.195411 GTTGATCTTTATTTGCATCAACTGAAA 57.805 29.630 15.05 0.00 46.19 2.69
1534 6558 9.577110 TGATCTTTATTTGCATCAACTGAAATC 57.423 29.630 0.00 0.00 0.00 2.17
1538 6573 8.537049 TTTATTTGCATCAACTGAAATCAAGG 57.463 30.769 0.00 0.00 0.00 3.61
1539 6574 5.787953 TTTGCATCAACTGAAATCAAGGA 57.212 34.783 0.00 0.00 0.00 3.36
1575 6610 5.220472 CGGAATGTGTATGTGTTGATCTGAC 60.220 44.000 0.00 0.00 0.00 3.51
1587 6622 4.036734 TGTTGATCTGACTTGGCTTCAAAC 59.963 41.667 0.00 0.00 0.00 2.93
1588 6623 3.149196 TGATCTGACTTGGCTTCAAACC 58.851 45.455 0.00 0.00 0.00 3.27
1590 6625 3.228188 TCTGACTTGGCTTCAAACCAT 57.772 42.857 0.00 0.00 36.96 3.55
1591 6626 4.365514 TCTGACTTGGCTTCAAACCATA 57.634 40.909 0.00 0.00 36.96 2.74
1592 6627 4.326826 TCTGACTTGGCTTCAAACCATAG 58.673 43.478 0.00 0.00 36.96 2.23
1593 6628 4.041567 TCTGACTTGGCTTCAAACCATAGA 59.958 41.667 0.00 0.00 36.96 1.98
1594 6629 4.922206 TGACTTGGCTTCAAACCATAGAT 58.078 39.130 0.00 0.00 36.96 1.98
1595 6630 5.324409 TGACTTGGCTTCAAACCATAGATT 58.676 37.500 0.00 0.00 36.96 2.40
1596 6631 6.480763 TGACTTGGCTTCAAACCATAGATTA 58.519 36.000 0.00 0.00 36.96 1.75
1597 6632 6.945435 TGACTTGGCTTCAAACCATAGATTAA 59.055 34.615 0.00 0.00 36.96 1.40
1598 6633 7.450014 TGACTTGGCTTCAAACCATAGATTAAA 59.550 33.333 0.00 0.00 36.96 1.52
1599 6634 8.189119 ACTTGGCTTCAAACCATAGATTAAAA 57.811 30.769 0.00 0.00 36.96 1.52
1600 6635 8.815912 ACTTGGCTTCAAACCATAGATTAAAAT 58.184 29.630 0.00 0.00 36.96 1.82
1601 6636 9.305925 CTTGGCTTCAAACCATAGATTAAAATC 57.694 33.333 0.00 0.00 36.96 2.17
1602 6637 7.479980 TGGCTTCAAACCATAGATTAAAATCG 58.520 34.615 0.00 0.00 34.82 3.34
1603 6638 7.122055 TGGCTTCAAACCATAGATTAAAATCGT 59.878 33.333 0.00 0.00 34.82 3.73
1604 6639 7.432252 GGCTTCAAACCATAGATTAAAATCGTG 59.568 37.037 0.00 1.78 40.35 4.35
1605 6640 7.432252 GCTTCAAACCATAGATTAAAATCGTGG 59.568 37.037 19.73 19.73 44.47 4.94
1606 6641 7.328277 TCAAACCATAGATTAAAATCGTGGG 57.672 36.000 22.69 15.73 43.85 4.61
1607 6642 7.113437 TCAAACCATAGATTAAAATCGTGGGA 58.887 34.615 22.69 13.80 43.85 4.37
1608 6643 7.282224 TCAAACCATAGATTAAAATCGTGGGAG 59.718 37.037 22.69 15.87 43.85 4.30
1609 6644 6.494666 ACCATAGATTAAAATCGTGGGAGA 57.505 37.500 22.69 0.25 43.85 3.71
1610 6645 6.895782 ACCATAGATTAAAATCGTGGGAGAA 58.104 36.000 22.69 0.00 43.85 2.87
1611 6646 7.343357 ACCATAGATTAAAATCGTGGGAGAAA 58.657 34.615 22.69 0.00 43.85 2.52
1612 6647 7.282450 ACCATAGATTAAAATCGTGGGAGAAAC 59.718 37.037 22.69 0.00 43.85 2.78
1613 6648 5.796350 AGATTAAAATCGTGGGAGAAACG 57.204 39.130 0.00 0.00 40.35 3.60
1619 6654 1.705256 TCGTGGGAGAAACGATTTCG 58.295 50.000 0.00 0.00 44.58 3.46
1620 6655 0.094730 CGTGGGAGAAACGATTTCGC 59.905 55.000 0.00 0.00 43.68 4.70
1621 6656 0.094730 GTGGGAGAAACGATTTCGCG 59.905 55.000 0.00 0.00 44.29 5.87
1622 6657 1.017177 TGGGAGAAACGATTTCGCGG 61.017 55.000 6.13 0.00 44.29 6.46
1623 6658 1.060465 GGAGAAACGATTTCGCGGC 59.940 57.895 6.13 0.00 44.29 6.53
1624 6659 1.295930 GAGAAACGATTTCGCGGCG 60.296 57.895 17.70 17.70 44.29 6.46
1625 6660 2.937502 GAAACGATTTCGCGGCGC 60.938 61.111 24.21 24.21 44.43 6.53
1626 6661 4.454717 AAACGATTTCGCGGCGCC 62.455 61.111 27.87 19.07 44.43 6.53
1641 6676 2.765807 GCCCTCTCCCAGCAGCTA 60.766 66.667 0.00 0.00 0.00 3.32
1642 6677 2.146061 GCCCTCTCCCAGCAGCTAT 61.146 63.158 0.00 0.00 0.00 2.97
1643 6678 0.833834 GCCCTCTCCCAGCAGCTATA 60.834 60.000 0.00 0.00 0.00 1.31
1644 6679 1.265236 CCCTCTCCCAGCAGCTATAG 58.735 60.000 0.00 0.00 0.00 1.31
1645 6680 0.607620 CCTCTCCCAGCAGCTATAGC 59.392 60.000 17.33 17.33 42.49 2.97
1655 6690 2.577059 GCTATAGCGGCGGCCATA 59.423 61.111 20.71 11.55 41.24 2.74
1656 6691 1.519455 GCTATAGCGGCGGCCATAG 60.519 63.158 21.74 21.74 41.85 2.23
1657 6692 1.890894 CTATAGCGGCGGCCATAGT 59.109 57.895 20.71 4.53 36.49 2.12
1658 6693 0.458543 CTATAGCGGCGGCCATAGTG 60.459 60.000 20.71 2.88 36.49 2.74
1659 6694 1.884075 TATAGCGGCGGCCATAGTGG 61.884 60.000 20.71 2.07 41.24 4.00
1669 6704 2.706636 CCATAGTGGGCAATCACGG 58.293 57.895 0.00 0.00 42.10 4.94
1670 6705 1.447317 CCATAGTGGGCAATCACGGC 61.447 60.000 0.00 0.00 42.10 5.68
1671 6706 0.747644 CATAGTGGGCAATCACGGCA 60.748 55.000 0.00 0.00 42.10 5.69
1672 6707 0.034574 ATAGTGGGCAATCACGGCAA 60.035 50.000 0.00 0.00 42.10 4.52
1673 6708 0.250945 TAGTGGGCAATCACGGCAAA 60.251 50.000 0.00 0.00 42.10 3.68
1674 6709 0.899717 AGTGGGCAATCACGGCAAAT 60.900 50.000 0.00 0.00 42.10 2.32
1675 6710 0.814457 GTGGGCAATCACGGCAAATA 59.186 50.000 0.00 0.00 0.00 1.40
1676 6711 1.102154 TGGGCAATCACGGCAAATAG 58.898 50.000 0.00 0.00 0.00 1.73
1677 6712 0.249031 GGGCAATCACGGCAAATAGC 60.249 55.000 0.00 0.00 44.65 2.97
1709 6744 6.648879 TTTTGGTGGGAGAGATAACTTTTG 57.351 37.500 0.00 0.00 0.00 2.44
1710 6745 4.301072 TGGTGGGAGAGATAACTTTTGG 57.699 45.455 0.00 0.00 0.00 3.28
1711 6746 3.913799 TGGTGGGAGAGATAACTTTTGGA 59.086 43.478 0.00 0.00 0.00 3.53
1712 6747 4.019321 TGGTGGGAGAGATAACTTTTGGAG 60.019 45.833 0.00 0.00 0.00 3.86
1713 6748 4.518249 GTGGGAGAGATAACTTTTGGAGG 58.482 47.826 0.00 0.00 0.00 4.30
1714 6749 3.523564 TGGGAGAGATAACTTTTGGAGGG 59.476 47.826 0.00 0.00 0.00 4.30
1715 6750 3.523972 GGGAGAGATAACTTTTGGAGGGT 59.476 47.826 0.00 0.00 0.00 4.34
1716 6751 4.018324 GGGAGAGATAACTTTTGGAGGGTT 60.018 45.833 0.00 0.00 0.00 4.11
1717 6752 5.516768 GGGAGAGATAACTTTTGGAGGGTTT 60.517 44.000 0.00 0.00 0.00 3.27
1718 6753 6.010850 GGAGAGATAACTTTTGGAGGGTTTT 58.989 40.000 0.00 0.00 0.00 2.43
1719 6754 6.071896 GGAGAGATAACTTTTGGAGGGTTTTG 60.072 42.308 0.00 0.00 0.00 2.44
1720 6755 5.243954 AGAGATAACTTTTGGAGGGTTTTGC 59.756 40.000 0.00 0.00 0.00 3.68
1721 6756 5.147767 AGATAACTTTTGGAGGGTTTTGCT 58.852 37.500 0.00 0.00 0.00 3.91
1722 6757 3.541996 AACTTTTGGAGGGTTTTGCTG 57.458 42.857 0.00 0.00 0.00 4.41
1723 6758 2.745968 ACTTTTGGAGGGTTTTGCTGA 58.254 42.857 0.00 0.00 0.00 4.26
1724 6759 3.308401 ACTTTTGGAGGGTTTTGCTGAT 58.692 40.909 0.00 0.00 0.00 2.90
1725 6760 3.711190 ACTTTTGGAGGGTTTTGCTGATT 59.289 39.130 0.00 0.00 0.00 2.57
1726 6761 4.164030 ACTTTTGGAGGGTTTTGCTGATTT 59.836 37.500 0.00 0.00 0.00 2.17
1727 6762 4.335400 TTTGGAGGGTTTTGCTGATTTC 57.665 40.909 0.00 0.00 0.00 2.17
1728 6763 3.243359 TGGAGGGTTTTGCTGATTTCT 57.757 42.857 0.00 0.00 0.00 2.52
1729 6764 2.892852 TGGAGGGTTTTGCTGATTTCTG 59.107 45.455 0.00 0.00 0.00 3.02
1730 6765 3.157087 GGAGGGTTTTGCTGATTTCTGA 58.843 45.455 0.00 0.00 0.00 3.27
1731 6766 3.192212 GGAGGGTTTTGCTGATTTCTGAG 59.808 47.826 0.00 0.00 0.00 3.35
1732 6767 2.560105 AGGGTTTTGCTGATTTCTGAGC 59.440 45.455 0.00 0.00 35.65 4.26
1733 6768 2.297033 GGGTTTTGCTGATTTCTGAGCA 59.703 45.455 0.00 0.00 43.47 4.26
1734 6769 3.056322 GGGTTTTGCTGATTTCTGAGCAT 60.056 43.478 0.00 0.00 44.51 3.79
1735 6770 4.562143 GGGTTTTGCTGATTTCTGAGCATT 60.562 41.667 0.00 0.00 44.51 3.56
1736 6771 4.992951 GGTTTTGCTGATTTCTGAGCATTT 59.007 37.500 0.00 0.00 44.51 2.32
1737 6772 6.158598 GGTTTTGCTGATTTCTGAGCATTTA 58.841 36.000 0.00 0.00 44.51 1.40
1738 6773 6.309737 GGTTTTGCTGATTTCTGAGCATTTAG 59.690 38.462 0.00 0.00 44.51 1.85
1739 6774 6.822667 TTTGCTGATTTCTGAGCATTTAGA 57.177 33.333 0.00 0.00 44.51 2.10
1740 6775 6.432607 TTGCTGATTTCTGAGCATTTAGAG 57.567 37.500 0.00 0.00 44.51 2.43
1741 6776 4.334759 TGCTGATTTCTGAGCATTTAGAGC 59.665 41.667 0.00 0.00 40.30 4.09
1742 6777 4.552378 GCTGATTTCTGAGCATTTAGAGCG 60.552 45.833 0.00 0.00 35.15 5.03
1743 6778 4.758688 TGATTTCTGAGCATTTAGAGCGA 58.241 39.130 0.00 0.00 37.01 4.93
1744 6779 4.807834 TGATTTCTGAGCATTTAGAGCGAG 59.192 41.667 0.00 0.00 37.01 5.03
1745 6780 2.879002 TCTGAGCATTTAGAGCGAGG 57.121 50.000 0.00 0.00 37.01 4.63
1746 6781 1.410517 TCTGAGCATTTAGAGCGAGGG 59.589 52.381 0.00 0.00 37.01 4.30
1747 6782 1.410517 CTGAGCATTTAGAGCGAGGGA 59.589 52.381 0.00 0.00 37.01 4.20
1748 6783 2.036992 CTGAGCATTTAGAGCGAGGGAT 59.963 50.000 0.00 0.00 37.01 3.85
1749 6784 3.230976 TGAGCATTTAGAGCGAGGGATA 58.769 45.455 0.00 0.00 37.01 2.59
1750 6785 3.834813 TGAGCATTTAGAGCGAGGGATAT 59.165 43.478 0.00 0.00 37.01 1.63
1751 6786 4.180057 GAGCATTTAGAGCGAGGGATATG 58.820 47.826 0.00 0.00 37.01 1.78
1752 6787 3.580458 AGCATTTAGAGCGAGGGATATGT 59.420 43.478 0.00 0.00 37.01 2.29
1753 6788 3.681897 GCATTTAGAGCGAGGGATATGTG 59.318 47.826 0.00 0.00 0.00 3.21
1754 6789 4.248859 CATTTAGAGCGAGGGATATGTGG 58.751 47.826 0.00 0.00 0.00 4.17
1755 6790 2.971901 TAGAGCGAGGGATATGTGGA 57.028 50.000 0.00 0.00 0.00 4.02
1756 6791 2.088104 AGAGCGAGGGATATGTGGAA 57.912 50.000 0.00 0.00 0.00 3.53
1757 6792 1.967066 AGAGCGAGGGATATGTGGAAG 59.033 52.381 0.00 0.00 0.00 3.46
1758 6793 1.964223 GAGCGAGGGATATGTGGAAGA 59.036 52.381 0.00 0.00 0.00 2.87
1759 6794 2.564947 GAGCGAGGGATATGTGGAAGAT 59.435 50.000 0.00 0.00 0.00 2.40
1760 6795 2.975489 AGCGAGGGATATGTGGAAGATT 59.025 45.455 0.00 0.00 0.00 2.40
1761 6796 3.392616 AGCGAGGGATATGTGGAAGATTT 59.607 43.478 0.00 0.00 0.00 2.17
1762 6797 3.748568 GCGAGGGATATGTGGAAGATTTC 59.251 47.826 0.00 0.00 0.00 2.17
1763 6798 3.990469 CGAGGGATATGTGGAAGATTTCG 59.010 47.826 0.00 0.00 0.00 3.46
1764 6799 3.744660 AGGGATATGTGGAAGATTTCGC 58.255 45.455 0.00 0.00 32.52 4.70
1765 6800 2.480419 GGGATATGTGGAAGATTTCGCG 59.520 50.000 0.00 0.00 0.00 5.87
1766 6801 2.480419 GGATATGTGGAAGATTTCGCGG 59.520 50.000 6.13 0.00 0.00 6.46
1767 6802 1.295792 TATGTGGAAGATTTCGCGGC 58.704 50.000 6.13 0.00 0.00 6.53
1768 6803 0.676466 ATGTGGAAGATTTCGCGGCA 60.676 50.000 6.13 0.00 0.00 5.69
1769 6804 1.298157 TGTGGAAGATTTCGCGGCAG 61.298 55.000 6.13 0.00 0.00 4.85
1770 6805 2.398554 TGGAAGATTTCGCGGCAGC 61.399 57.895 6.13 0.00 40.74 5.25
1771 6806 2.398554 GGAAGATTTCGCGGCAGCA 61.399 57.895 10.08 0.00 45.49 4.41
1772 6807 1.061570 GAAGATTTCGCGGCAGCAG 59.938 57.895 10.08 1.86 45.49 4.24
1773 6808 1.361668 GAAGATTTCGCGGCAGCAGA 61.362 55.000 10.08 4.45 45.49 4.26
1774 6809 1.639298 AAGATTTCGCGGCAGCAGAC 61.639 55.000 10.08 0.00 45.49 3.51
1775 6810 2.358615 ATTTCGCGGCAGCAGACA 60.359 55.556 10.08 0.96 45.49 3.41
1776 6811 1.709147 GATTTCGCGGCAGCAGACAT 61.709 55.000 10.08 5.90 45.49 3.06
1777 6812 0.461870 ATTTCGCGGCAGCAGACATA 60.462 50.000 10.08 0.00 45.49 2.29
1778 6813 1.083806 TTTCGCGGCAGCAGACATAG 61.084 55.000 10.08 0.00 45.49 2.23
1779 6814 3.634072 CGCGGCAGCAGACATAGC 61.634 66.667 10.08 0.00 45.49 2.97
1780 6815 2.512286 GCGGCAGCAGACATAGCA 60.512 61.111 3.18 0.00 44.35 3.49
1781 6816 1.890979 GCGGCAGCAGACATAGCAT 60.891 57.895 3.18 0.00 44.35 3.79
1782 6817 0.601046 GCGGCAGCAGACATAGCATA 60.601 55.000 3.18 0.00 44.35 3.14
1783 6818 1.426423 CGGCAGCAGACATAGCATAG 58.574 55.000 0.00 0.00 0.00 2.23
1784 6819 1.155042 GGCAGCAGACATAGCATAGC 58.845 55.000 0.00 0.00 0.00 2.97
1785 6820 0.788995 GCAGCAGACATAGCATAGCG 59.211 55.000 0.00 0.00 0.00 4.26
1786 6821 1.426423 CAGCAGACATAGCATAGCGG 58.574 55.000 0.00 0.00 0.00 5.52
1787 6822 0.320247 AGCAGACATAGCATAGCGGC 60.320 55.000 0.00 0.00 0.00 6.53
1788 6823 0.601046 GCAGACATAGCATAGCGGCA 60.601 55.000 1.45 0.00 35.83 5.69
1789 6824 1.869774 CAGACATAGCATAGCGGCAA 58.130 50.000 1.45 0.00 35.83 4.52
1790 6825 1.797046 CAGACATAGCATAGCGGCAAG 59.203 52.381 1.45 0.00 35.83 4.01
1791 6826 1.151668 GACATAGCATAGCGGCAAGG 58.848 55.000 1.45 0.00 35.83 3.61
1792 6827 0.886490 ACATAGCATAGCGGCAAGGC 60.886 55.000 1.45 1.89 35.83 4.35
1793 6828 0.604780 CATAGCATAGCGGCAAGGCT 60.605 55.000 14.83 14.83 46.88 4.58
1794 6829 0.321122 ATAGCATAGCGGCAAGGCTC 60.321 55.000 14.06 0.00 43.54 4.70
1795 6830 2.383245 TAGCATAGCGGCAAGGCTCC 62.383 60.000 14.06 0.00 43.54 4.70
1796 6831 2.592861 CATAGCGGCAAGGCTCCC 60.593 66.667 1.45 0.00 43.54 4.30
1797 6832 4.241555 ATAGCGGCAAGGCTCCCG 62.242 66.667 18.81 18.81 43.54 5.14
1804 6839 4.711949 CAAGGCTCCCGTGCAGCT 62.712 66.667 0.00 0.00 37.05 4.24
1805 6840 3.003173 AAGGCTCCCGTGCAGCTA 61.003 61.111 0.00 0.00 37.05 3.32
1806 6841 2.370445 AAGGCTCCCGTGCAGCTAT 61.370 57.895 0.00 0.00 37.05 2.97
1807 6842 1.048724 AAGGCTCCCGTGCAGCTATA 61.049 55.000 0.00 0.00 37.05 1.31
1808 6843 1.048724 AGGCTCCCGTGCAGCTATAA 61.049 55.000 0.00 0.00 37.05 0.98
1809 6844 0.880718 GGCTCCCGTGCAGCTATAAC 60.881 60.000 0.00 0.00 37.05 1.89
1810 6845 1.215655 GCTCCCGTGCAGCTATAACG 61.216 60.000 7.76 7.76 37.07 3.18
1811 6846 1.215655 CTCCCGTGCAGCTATAACGC 61.216 60.000 8.95 0.00 36.02 4.84
1812 6847 1.520564 CCCGTGCAGCTATAACGCA 60.521 57.895 8.95 0.78 36.02 5.24
1813 6848 1.490693 CCCGTGCAGCTATAACGCAG 61.491 60.000 8.95 0.88 36.07 5.18
1814 6849 1.273887 CGTGCAGCTATAACGCAGC 59.726 57.895 0.00 0.00 42.02 5.25
1827 6862 4.386413 GCAGCTATTGCGGGCTAT 57.614 55.556 10.48 0.00 44.09 2.97
1828 6863 2.633860 GCAGCTATTGCGGGCTATT 58.366 52.632 10.48 0.00 44.09 1.73
1829 6864 0.954452 GCAGCTATTGCGGGCTATTT 59.046 50.000 10.48 0.00 44.09 1.40
1830 6865 1.338020 GCAGCTATTGCGGGCTATTTT 59.662 47.619 10.48 0.00 44.09 1.82
1831 6866 2.552315 GCAGCTATTGCGGGCTATTTTA 59.448 45.455 10.48 0.00 44.09 1.52
1832 6867 3.004315 GCAGCTATTGCGGGCTATTTTAA 59.996 43.478 10.48 0.00 44.09 1.52
1833 6868 4.321230 GCAGCTATTGCGGGCTATTTTAAT 60.321 41.667 10.48 0.00 44.09 1.40
1834 6869 5.393962 CAGCTATTGCGGGCTATTTTAATC 58.606 41.667 0.00 0.00 45.42 1.75
1835 6870 5.182001 CAGCTATTGCGGGCTATTTTAATCT 59.818 40.000 0.00 0.00 45.42 2.40
1836 6871 6.371548 CAGCTATTGCGGGCTATTTTAATCTA 59.628 38.462 0.00 0.00 45.42 1.98
1837 6872 7.066284 CAGCTATTGCGGGCTATTTTAATCTAT 59.934 37.037 0.00 0.00 45.42 1.98
1838 6873 7.066284 AGCTATTGCGGGCTATTTTAATCTATG 59.934 37.037 0.00 0.00 45.42 2.23
1839 6874 5.371115 TTGCGGGCTATTTTAATCTATGC 57.629 39.130 0.00 0.00 0.00 3.14
1843 6878 5.181245 GCGGGCTATTTTAATCTATGCTTCA 59.819 40.000 0.00 0.00 0.00 3.02
1865 6905 1.529152 CTTGATGTGCTTGCAGGGCA 61.529 55.000 11.52 11.52 36.47 5.36
1871 6911 2.044650 GCTTGCAGGGCATGGAGA 60.045 61.111 0.00 0.00 38.76 3.71
1872 6912 2.413142 GCTTGCAGGGCATGGAGAC 61.413 63.158 0.00 0.00 38.76 3.36
1879 6919 2.105128 GGCATGGAGACCGTCGAG 59.895 66.667 0.00 0.00 0.00 4.04
1894 6934 5.061853 ACCGTCGAGAATAGCTACTTCATA 58.938 41.667 14.38 2.15 0.00 2.15
2003 7064 1.860950 CATCGGAGAGCCACAATAACG 59.139 52.381 0.00 0.00 43.63 3.18
2445 7506 1.112113 GAAGTCGGCATCTGGGAGTA 58.888 55.000 0.00 0.00 0.00 2.59
2525 7586 3.929610 GTGCAACTCTGGAGATAAGTGTC 59.070 47.826 4.49 0.00 0.00 3.67
2527 7588 3.055819 GCAACTCTGGAGATAAGTGTCCA 60.056 47.826 4.49 0.00 44.85 4.02
2533 7594 3.028130 TGGAGATAAGTGTCCATGCGTA 58.972 45.455 0.00 0.00 42.42 4.42
2541 7602 0.941936 TGTCCATGCGTACGTGTGTG 60.942 55.000 17.90 10.21 0.00 3.82
2620 7696 4.657969 AGTTCTAGATTGGAGATTGGGAGG 59.342 45.833 0.00 0.00 0.00 4.30
2679 7763 9.950680 ATAATAATGTGAAAAGTTTCTATGGCG 57.049 29.630 5.45 0.00 38.02 5.69
2697 7781 2.605366 GGCGTCTGAAATTACAGCTCTC 59.395 50.000 0.00 0.00 37.75 3.20
2702 7786 5.288232 CGTCTGAAATTACAGCTCTCTTCAG 59.712 44.000 11.59 11.59 40.60 3.02
2703 7787 6.162777 GTCTGAAATTACAGCTCTCTTCAGT 58.837 40.000 15.06 0.00 40.29 3.41
2704 7788 6.090628 GTCTGAAATTACAGCTCTCTTCAGTG 59.909 42.308 15.06 0.00 40.29 3.66
2705 7789 5.858381 TGAAATTACAGCTCTCTTCAGTGT 58.142 37.500 0.00 0.00 0.00 3.55
2706 7790 6.291377 TGAAATTACAGCTCTCTTCAGTGTT 58.709 36.000 0.00 0.00 0.00 3.32
2707 7791 6.425114 TGAAATTACAGCTCTCTTCAGTGTTC 59.575 38.462 0.00 0.00 0.00 3.18
2708 7792 2.430546 ACAGCTCTCTTCAGTGTTCG 57.569 50.000 0.00 0.00 0.00 3.95
2709 7793 1.683917 ACAGCTCTCTTCAGTGTTCGT 59.316 47.619 0.00 0.00 0.00 3.85
2710 7794 2.101582 ACAGCTCTCTTCAGTGTTCGTT 59.898 45.455 0.00 0.00 0.00 3.85
2711 7795 3.126831 CAGCTCTCTTCAGTGTTCGTTT 58.873 45.455 0.00 0.00 0.00 3.60
2712 7796 3.183373 CAGCTCTCTTCAGTGTTCGTTTC 59.817 47.826 0.00 0.00 0.00 2.78
2713 7797 3.123804 GCTCTCTTCAGTGTTCGTTTCA 58.876 45.455 0.00 0.00 0.00 2.69
2714 7798 3.555956 GCTCTCTTCAGTGTTCGTTTCAA 59.444 43.478 0.00 0.00 0.00 2.69
2715 7799 4.212214 GCTCTCTTCAGTGTTCGTTTCAAT 59.788 41.667 0.00 0.00 0.00 2.57
2716 7800 5.277538 GCTCTCTTCAGTGTTCGTTTCAATT 60.278 40.000 0.00 0.00 0.00 2.32
2717 7801 6.677781 TCTCTTCAGTGTTCGTTTCAATTT 57.322 33.333 0.00 0.00 0.00 1.82
2718 7802 7.083875 TCTCTTCAGTGTTCGTTTCAATTTT 57.916 32.000 0.00 0.00 0.00 1.82
2719 7803 6.966632 TCTCTTCAGTGTTCGTTTCAATTTTG 59.033 34.615 0.00 0.00 0.00 2.44
2720 7804 6.847400 TCTTCAGTGTTCGTTTCAATTTTGA 58.153 32.000 0.00 0.00 34.92 2.69
2721 7805 6.745450 TCTTCAGTGTTCGTTTCAATTTTGAC 59.255 34.615 0.00 0.00 36.83 3.18
2722 7806 5.336744 TCAGTGTTCGTTTCAATTTTGACC 58.663 37.500 0.00 0.00 36.83 4.02
2723 7807 5.098893 CAGTGTTCGTTTCAATTTTGACCA 58.901 37.500 0.00 0.00 36.83 4.02
2724 7808 5.574830 CAGTGTTCGTTTCAATTTTGACCAA 59.425 36.000 0.00 0.00 36.83 3.67
2725 7809 6.090088 CAGTGTTCGTTTCAATTTTGACCAAA 59.910 34.615 0.00 0.00 36.83 3.28
2726 7810 6.647067 AGTGTTCGTTTCAATTTTGACCAAAA 59.353 30.769 9.94 9.94 43.48 2.44
2727 7811 7.171678 AGTGTTCGTTTCAATTTTGACCAAAAA 59.828 29.630 11.34 0.00 42.71 1.94
2728 7812 7.477112 GTGTTCGTTTCAATTTTGACCAAAAAG 59.523 33.333 11.34 7.94 42.71 2.27
2729 7813 6.654793 TCGTTTCAATTTTGACCAAAAAGG 57.345 33.333 11.34 7.35 42.71 3.11
2730 7814 6.398918 TCGTTTCAATTTTGACCAAAAAGGA 58.601 32.000 11.34 9.20 42.71 3.36
2731 7815 6.533367 TCGTTTCAATTTTGACCAAAAAGGAG 59.467 34.615 11.34 3.61 42.71 3.69
2732 7816 6.312672 CGTTTCAATTTTGACCAAAAAGGAGT 59.687 34.615 11.34 0.00 42.71 3.85
2733 7817 7.148490 CGTTTCAATTTTGACCAAAAAGGAGTT 60.148 33.333 11.34 0.00 42.71 3.01
2734 7818 8.511321 GTTTCAATTTTGACCAAAAAGGAGTTT 58.489 29.630 11.34 0.00 42.71 2.66
2735 7819 7.841915 TCAATTTTGACCAAAAAGGAGTTTC 57.158 32.000 11.34 0.00 42.71 2.78
2736 7820 6.821160 TCAATTTTGACCAAAAAGGAGTTTCC 59.179 34.615 11.34 0.00 42.71 3.13
2737 7821 4.746535 TTTGACCAAAAAGGAGTTTCCC 57.253 40.909 0.00 0.00 41.22 3.97
2738 7822 2.673258 TGACCAAAAAGGAGTTTCCCC 58.327 47.619 0.00 0.00 41.22 4.81
2739 7823 1.968493 GACCAAAAAGGAGTTTCCCCC 59.032 52.381 0.00 0.00 41.22 5.40
2740 7824 0.966179 CCAAAAAGGAGTTTCCCCCG 59.034 55.000 0.00 0.00 41.22 5.73
2741 7825 0.966179 CAAAAAGGAGTTTCCCCCGG 59.034 55.000 0.00 0.00 37.19 5.73
2742 7826 0.830444 AAAAAGGAGTTTCCCCCGGC 60.830 55.000 0.00 0.00 37.19 6.13
2743 7827 1.726192 AAAAGGAGTTTCCCCCGGCT 61.726 55.000 0.00 0.00 37.19 5.52
2744 7828 1.726192 AAAGGAGTTTCCCCCGGCTT 61.726 55.000 0.00 0.00 37.19 4.35
2745 7829 2.045242 GGAGTTTCCCCCGGCTTC 60.045 66.667 0.00 0.00 0.00 3.86
2746 7830 2.754375 GAGTTTCCCCCGGCTTCA 59.246 61.111 0.00 0.00 0.00 3.02
2747 7831 1.674651 GAGTTTCCCCCGGCTTCAC 60.675 63.158 0.00 0.00 0.00 3.18
2748 7832 2.675423 GTTTCCCCCGGCTTCACC 60.675 66.667 0.00 0.00 0.00 4.02
2749 7833 2.856988 TTTCCCCCGGCTTCACCT 60.857 61.111 0.00 0.00 35.61 4.00
2750 7834 2.466186 TTTCCCCCGGCTTCACCTT 61.466 57.895 0.00 0.00 35.61 3.50
2751 7835 2.014033 TTTCCCCCGGCTTCACCTTT 62.014 55.000 0.00 0.00 35.61 3.11
2752 7836 2.014033 TTCCCCCGGCTTCACCTTTT 62.014 55.000 0.00 0.00 35.61 2.27
2753 7837 1.135068 TCCCCCGGCTTCACCTTTTA 61.135 55.000 0.00 0.00 35.61 1.52
2754 7838 0.033503 CCCCCGGCTTCACCTTTTAT 60.034 55.000 0.00 0.00 35.61 1.40
2755 7839 1.618616 CCCCCGGCTTCACCTTTTATT 60.619 52.381 0.00 0.00 35.61 1.40
2756 7840 2.357361 CCCCCGGCTTCACCTTTTATTA 60.357 50.000 0.00 0.00 35.61 0.98
2757 7841 3.358118 CCCCGGCTTCACCTTTTATTAA 58.642 45.455 0.00 0.00 35.61 1.40
2758 7842 3.764972 CCCCGGCTTCACCTTTTATTAAA 59.235 43.478 0.00 0.00 35.61 1.52
2759 7843 4.142249 CCCCGGCTTCACCTTTTATTAAAG 60.142 45.833 0.00 0.00 40.38 1.85
2760 7844 4.703093 CCCGGCTTCACCTTTTATTAAAGA 59.297 41.667 5.78 0.00 42.78 2.52
2761 7845 5.163652 CCCGGCTTCACCTTTTATTAAAGAG 60.164 44.000 5.78 0.00 42.78 2.85
2762 7846 5.414765 CCGGCTTCACCTTTTATTAAAGAGT 59.585 40.000 5.78 0.11 42.78 3.24
2763 7847 6.072119 CCGGCTTCACCTTTTATTAAAGAGTT 60.072 38.462 5.78 0.00 42.78 3.01
2764 7848 7.120138 CCGGCTTCACCTTTTATTAAAGAGTTA 59.880 37.037 5.78 0.00 42.78 2.24
2765 7849 7.961283 CGGCTTCACCTTTTATTAAAGAGTTAC 59.039 37.037 5.78 0.00 42.78 2.50
2766 7850 9.011095 GGCTTCACCTTTTATTAAAGAGTTACT 57.989 33.333 5.78 0.00 42.78 2.24
2780 7864 9.573166 TTAAAGAGTTACTTACCTTTTTACCCC 57.427 33.333 3.47 0.00 37.93 4.95
2781 7865 6.768641 AGAGTTACTTACCTTTTTACCCCA 57.231 37.500 0.00 0.00 0.00 4.96
2782 7866 7.152942 AGAGTTACTTACCTTTTTACCCCAA 57.847 36.000 0.00 0.00 0.00 4.12
2783 7867 7.585440 AGAGTTACTTACCTTTTTACCCCAAA 58.415 34.615 0.00 0.00 0.00 3.28
2784 7868 8.060689 AGAGTTACTTACCTTTTTACCCCAAAA 58.939 33.333 0.00 0.00 34.26 2.44
2785 7869 8.606754 AGTTACTTACCTTTTTACCCCAAAAA 57.393 30.769 0.00 0.00 42.47 1.94
2786 7870 9.216148 AGTTACTTACCTTTTTACCCCAAAAAT 57.784 29.630 0.00 0.00 43.42 1.82
2793 7877 8.688222 ACCTTTTTACCCCAAAAATATATGGT 57.312 30.769 0.00 0.00 43.42 3.55
2794 7878 9.118367 ACCTTTTTACCCCAAAAATATATGGTT 57.882 29.630 0.00 0.00 43.42 3.67
2795 7879 9.967451 CCTTTTTACCCCAAAAATATATGGTTT 57.033 29.630 0.00 0.00 43.42 3.27
2815 7899 7.653647 TGGTTTTTATTAGCAAACACAGTAGG 58.346 34.615 0.00 0.00 35.01 3.18
2816 7900 7.088272 GGTTTTTATTAGCAAACACAGTAGGG 58.912 38.462 0.00 0.00 35.01 3.53
2817 7901 7.255695 GGTTTTTATTAGCAAACACAGTAGGGT 60.256 37.037 0.00 0.00 35.01 4.34
2818 7902 8.785946 GTTTTTATTAGCAAACACAGTAGGGTA 58.214 33.333 0.00 0.00 33.75 3.69
2819 7903 8.921353 TTTTATTAGCAAACACAGTAGGGTAA 57.079 30.769 0.00 0.00 0.00 2.85
2820 7904 8.921353 TTTATTAGCAAACACAGTAGGGTAAA 57.079 30.769 0.00 0.00 0.00 2.01
2821 7905 8.921353 TTATTAGCAAACACAGTAGGGTAAAA 57.079 30.769 0.00 0.00 0.00 1.52
2822 7906 7.826918 ATTAGCAAACACAGTAGGGTAAAAA 57.173 32.000 0.00 0.00 0.00 1.94
2823 7907 5.509716 AGCAAACACAGTAGGGTAAAAAC 57.490 39.130 0.00 0.00 0.00 2.43
2824 7908 4.340097 AGCAAACACAGTAGGGTAAAAACC 59.660 41.667 0.00 0.00 0.00 3.27
2838 7922 7.387119 GGGTAAAAACCCTATTGTAACTCTG 57.613 40.000 6.34 0.00 46.39 3.35
2839 7923 7.170277 GGGTAAAAACCCTATTGTAACTCTGA 58.830 38.462 6.34 0.00 46.39 3.27
2840 7924 7.832685 GGGTAAAAACCCTATTGTAACTCTGAT 59.167 37.037 6.34 0.00 46.39 2.90
2841 7925 9.239551 GGTAAAAACCCTATTGTAACTCTGATT 57.760 33.333 0.00 0.00 0.00 2.57
2846 7930 8.934023 AACCCTATTGTAACTCTGATTTTTCA 57.066 30.769 0.00 0.00 0.00 2.69
2847 7931 9.533831 AACCCTATTGTAACTCTGATTTTTCAT 57.466 29.630 0.00 0.00 0.00 2.57
2848 7932 9.533831 ACCCTATTGTAACTCTGATTTTTCATT 57.466 29.630 0.00 0.00 0.00 2.57
2924 8008 0.539986 GGACCGAGGTTAGCCAATCA 59.460 55.000 0.00 0.00 37.19 2.57
2962 8046 7.228507 TCTGTGTGTTATTGTCTATGTTTGCTT 59.771 33.333 0.00 0.00 0.00 3.91
2963 8047 7.138081 TGTGTGTTATTGTCTATGTTTGCTTG 58.862 34.615 0.00 0.00 0.00 4.01
2964 8048 7.138736 GTGTGTTATTGTCTATGTTTGCTTGT 58.861 34.615 0.00 0.00 0.00 3.16
2977 8061 2.584835 TGCTTGTGCCCTGTTTCTAT 57.415 45.000 0.00 0.00 38.71 1.98
2988 8072 3.130516 CCCTGTTTCTATCGTAGCAGACA 59.869 47.826 0.00 0.00 0.00 3.41
2993 8077 2.298610 TCTATCGTAGCAGACAGTGGG 58.701 52.381 0.00 0.00 0.00 4.61
3031 8115 0.331278 TGGTCATTGTCCACCCATCC 59.669 55.000 0.00 0.00 0.00 3.51
3072 8156 1.076332 GTAGGTTGTGGCGTGATGTC 58.924 55.000 0.00 0.00 0.00 3.06
3080 8164 2.000447 GTGGCGTGATGTCTTCCTTAC 59.000 52.381 0.00 0.00 0.00 2.34
3126 8210 8.784043 GTTTTCCTCATAGTTTATCCGCATAAT 58.216 33.333 0.00 0.00 0.00 1.28
3153 8237 7.451731 TTTGGATCCTCCTATGTAGATGTTT 57.548 36.000 14.23 0.00 37.46 2.83
3154 8238 8.561536 TTTGGATCCTCCTATGTAGATGTTTA 57.438 34.615 14.23 0.00 37.46 2.01
3155 8239 7.540474 TGGATCCTCCTATGTAGATGTTTAC 57.460 40.000 14.23 0.00 37.46 2.01
3156 8240 7.306013 TGGATCCTCCTATGTAGATGTTTACT 58.694 38.462 14.23 0.00 37.46 2.24
3157 8241 7.451877 TGGATCCTCCTATGTAGATGTTTACTC 59.548 40.741 14.23 0.00 37.46 2.59
3158 8242 7.672239 GGATCCTCCTATGTAGATGTTTACTCT 59.328 40.741 3.84 0.00 32.53 3.24
3159 8243 8.644374 ATCCTCCTATGTAGATGTTTACTCTC 57.356 38.462 0.00 0.00 0.00 3.20
3160 8244 7.005296 TCCTCCTATGTAGATGTTTACTCTCC 58.995 42.308 0.00 0.00 0.00 3.71
3161 8245 7.007723 CCTCCTATGTAGATGTTTACTCTCCT 58.992 42.308 0.00 0.00 0.00 3.69
3162 8246 7.175990 CCTCCTATGTAGATGTTTACTCTCCTC 59.824 44.444 0.00 0.00 0.00 3.71
3163 8247 7.817440 TCCTATGTAGATGTTTACTCTCCTCT 58.183 38.462 0.00 0.00 0.00 3.69
3164 8248 8.282982 TCCTATGTAGATGTTTACTCTCCTCTT 58.717 37.037 0.00 0.00 0.00 2.85
3165 8249 8.919145 CCTATGTAGATGTTTACTCTCCTCTTT 58.081 37.037 0.00 0.00 0.00 2.52
3166 8250 9.959749 CTATGTAGATGTTTACTCTCCTCTTTC 57.040 37.037 0.00 0.00 0.00 2.62
3167 8251 8.602472 ATGTAGATGTTTACTCTCCTCTTTCT 57.398 34.615 0.00 0.00 0.00 2.52
3168 8252 8.423906 TGTAGATGTTTACTCTCCTCTTTCTT 57.576 34.615 0.00 0.00 0.00 2.52
3169 8253 8.524487 TGTAGATGTTTACTCTCCTCTTTCTTC 58.476 37.037 0.00 0.00 0.00 2.87
3170 8254 7.790782 AGATGTTTACTCTCCTCTTTCTTCT 57.209 36.000 0.00 0.00 0.00 2.85
3171 8255 8.201242 AGATGTTTACTCTCCTCTTTCTTCTT 57.799 34.615 0.00 0.00 0.00 2.52
3172 8256 8.655901 AGATGTTTACTCTCCTCTTTCTTCTTT 58.344 33.333 0.00 0.00 0.00 2.52
3173 8257 9.278978 GATGTTTACTCTCCTCTTTCTTCTTTT 57.721 33.333 0.00 0.00 0.00 2.27
3174 8258 9.634021 ATGTTTACTCTCCTCTTTCTTCTTTTT 57.366 29.630 0.00 0.00 0.00 1.94
3196 8280 4.471904 TGCGAATGATGTTTACTCTCCT 57.528 40.909 0.00 0.00 0.00 3.69
3200 8284 5.688176 GCGAATGATGTTTACTCTCCTCTAC 59.312 44.000 0.00 0.00 0.00 2.59
3205 8289 7.397892 TGATGTTTACTCTCCTCTACAAGAG 57.602 40.000 0.00 0.00 43.78 2.85
3295 8380 3.393687 TGGTAGTTCATAGGGGCATCTT 58.606 45.455 0.00 0.00 0.00 2.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 5.742453 TCTCTCAATTTATAGAACGTGTCGC 59.258 40.000 0.00 0.00 0.00 5.19
9 10 6.967767 ACTCTCTCAATTTATAGAACGTGTCG 59.032 38.462 0.00 0.00 0.00 4.35
10 11 9.784680 TTACTCTCTCAATTTATAGAACGTGTC 57.215 33.333 0.00 0.00 0.00 3.67
11 12 9.570488 GTTACTCTCTCAATTTATAGAACGTGT 57.430 33.333 0.00 0.00 0.00 4.49
12 13 9.021863 GGTTACTCTCTCAATTTATAGAACGTG 57.978 37.037 0.00 0.00 0.00 4.49
13 14 8.968969 AGGTTACTCTCTCAATTTATAGAACGT 58.031 33.333 0.00 0.00 0.00 3.99
14 15 9.804758 AAGGTTACTCTCTCAATTTATAGAACG 57.195 33.333 0.00 0.00 0.00 3.95
22 23 9.967346 GCTTTAAAAAGGTTACTCTCTCAATTT 57.033 29.630 4.71 0.00 36.53 1.82
23 24 9.355916 AGCTTTAAAAAGGTTACTCTCTCAATT 57.644 29.630 1.41 0.00 43.61 2.32
24 25 8.787852 CAGCTTTAAAAAGGTTACTCTCTCAAT 58.212 33.333 4.48 0.00 43.61 2.57
25 26 7.990886 TCAGCTTTAAAAAGGTTACTCTCTCAA 59.009 33.333 4.48 0.00 43.61 3.02
26 27 7.506114 TCAGCTTTAAAAAGGTTACTCTCTCA 58.494 34.615 4.48 0.00 43.61 3.27
27 28 7.964604 TCAGCTTTAAAAAGGTTACTCTCTC 57.035 36.000 4.48 0.00 43.61 3.20
28 29 8.622157 GTTTCAGCTTTAAAAAGGTTACTCTCT 58.378 33.333 4.48 0.00 43.61 3.10
29 30 8.403236 TGTTTCAGCTTTAAAAAGGTTACTCTC 58.597 33.333 4.48 0.00 43.61 3.20
30 31 8.288689 TGTTTCAGCTTTAAAAAGGTTACTCT 57.711 30.769 4.48 0.00 43.61 3.24
31 32 8.804743 GTTGTTTCAGCTTTAAAAAGGTTACTC 58.195 33.333 4.48 0.00 43.61 2.59
32 33 8.528643 AGTTGTTTCAGCTTTAAAAAGGTTACT 58.471 29.630 4.48 0.89 43.61 2.24
33 34 8.697846 AGTTGTTTCAGCTTTAAAAAGGTTAC 57.302 30.769 4.48 4.92 43.61 2.50
34 35 9.791820 GTAGTTGTTTCAGCTTTAAAAAGGTTA 57.208 29.630 4.48 0.00 43.61 2.85
35 36 8.528643 AGTAGTTGTTTCAGCTTTAAAAAGGTT 58.471 29.630 4.48 0.00 43.61 3.50
36 37 8.063200 AGTAGTTGTTTCAGCTTTAAAAAGGT 57.937 30.769 1.41 1.41 46.71 3.50
37 38 7.648112 GGAGTAGTTGTTTCAGCTTTAAAAAGG 59.352 37.037 4.71 0.00 36.53 3.11
45 46 5.546621 TGTAGGAGTAGTTGTTTCAGCTT 57.453 39.130 0.00 0.00 0.00 3.74
109 110 9.323985 AGACTAGAGAATAATCTGCAAAACATC 57.676 33.333 0.00 0.00 35.54 3.06
198 199 6.183360 ACGTACCGATCTGTTGAGAATATTCA 60.183 38.462 17.56 0.00 0.00 2.57
199 200 6.207213 ACGTACCGATCTGTTGAGAATATTC 58.793 40.000 7.41 7.41 0.00 1.75
228 229 3.942748 AGCACCGACTTCTTACAAAAACA 59.057 39.130 0.00 0.00 0.00 2.83
258 259 1.067142 ACGGTGCATCACATACGACTT 60.067 47.619 0.00 0.00 35.86 3.01
271 272 1.810031 GCCATTATCAGCTACGGTGCA 60.810 52.381 4.81 0.00 34.99 4.57
294 295 9.838975 TTATTATTATTATGTGCTGAAATGCCG 57.161 29.630 0.00 0.00 0.00 5.69
515 1940 4.272504 GCCATTCCATTCAAAAGATGCATG 59.727 41.667 2.46 0.00 33.09 4.06
516 1941 4.080807 TGCCATTCCATTCAAAAGATGCAT 60.081 37.500 0.00 0.00 0.00 3.96
517 1942 3.261137 TGCCATTCCATTCAAAAGATGCA 59.739 39.130 0.00 0.00 0.00 3.96
518 1943 3.864243 TGCCATTCCATTCAAAAGATGC 58.136 40.909 0.00 0.00 0.00 3.91
556 1981 5.045505 ACTTTTGGCCTTGGTTTAGGAAAAA 60.046 36.000 3.32 0.00 37.50 1.94
618 2043 0.169009 GCCAAATTCTGTGAGGTCGC 59.831 55.000 0.00 0.00 0.00 5.19
676 2101 5.223449 TCCCGTAAACTGGATCCATAATC 57.777 43.478 16.63 4.60 0.00 1.75
677 2102 5.805728 GATCCCGTAAACTGGATCCATAAT 58.194 41.667 16.63 6.72 45.42 1.28
754 2179 1.282875 GAAACCGCTGTCACTTGCC 59.717 57.895 0.00 0.00 0.00 4.52
833 2258 1.752358 GATGGCGATGGAGCTCTGGA 61.752 60.000 14.64 0.00 37.29 3.86
834 2259 1.301558 GATGGCGATGGAGCTCTGG 60.302 63.158 14.64 0.00 37.29 3.86
835 2260 1.664017 CGATGGCGATGGAGCTCTG 60.664 63.158 14.64 2.63 40.82 3.35
836 2261 2.733301 CGATGGCGATGGAGCTCT 59.267 61.111 14.64 0.00 40.82 4.09
854 2279 0.389817 TCAGCCACGAGAAACGATGG 60.390 55.000 0.00 0.00 45.77 3.51
856 2281 2.271800 GAATCAGCCACGAGAAACGAT 58.728 47.619 0.00 0.00 45.77 3.73
857 2282 1.671850 GGAATCAGCCACGAGAAACGA 60.672 52.381 0.00 0.00 45.77 3.85
859 2284 1.087501 GGGAATCAGCCACGAGAAAC 58.912 55.000 0.00 0.00 0.00 2.78
860 2285 0.984230 AGGGAATCAGCCACGAGAAA 59.016 50.000 0.00 0.00 0.00 2.52
861 2286 1.860641 TAGGGAATCAGCCACGAGAA 58.139 50.000 0.00 0.00 0.00 2.87
879 2304 0.388907 GGCGCGCTCCGGTATTTATA 60.389 55.000 32.29 0.00 37.44 0.98
890 2315 0.933097 CATGGATATATGGCGCGCTC 59.067 55.000 32.29 21.22 0.00 5.03
891 2316 1.091771 GCATGGATATATGGCGCGCT 61.092 55.000 32.29 15.35 0.00 5.92
892 2317 1.353103 GCATGGATATATGGCGCGC 59.647 57.895 25.94 25.94 0.00 6.86
893 2318 2.016961 GGCATGGATATATGGCGCG 58.983 57.895 0.00 0.00 42.58 6.86
909 2334 1.604278 GTGTGTGTTGGAGAAGAAGGC 59.396 52.381 0.00 0.00 0.00 4.35
930 2355 2.143122 TGTTGCTCGATCTGTTGGTTC 58.857 47.619 0.00 0.00 0.00 3.62
939 2364 3.589988 TCCTCTTTCTTGTTGCTCGATC 58.410 45.455 0.00 0.00 0.00 3.69
940 2365 3.259374 TCTCCTCTTTCTTGTTGCTCGAT 59.741 43.478 0.00 0.00 0.00 3.59
941 2366 2.628178 TCTCCTCTTTCTTGTTGCTCGA 59.372 45.455 0.00 0.00 0.00 4.04
942 2367 3.032017 TCTCCTCTTTCTTGTTGCTCG 57.968 47.619 0.00 0.00 0.00 5.03
958 2383 1.525619 GTGTTGTGCACTACGTTCTCC 59.474 52.381 23.14 6.22 44.41 3.71
1058 2483 2.284921 CCTCCTCCTGCCTGTGGA 60.285 66.667 0.00 0.00 0.00 4.02
1059 2484 4.106925 GCCTCCTCCTGCCTGTGG 62.107 72.222 0.00 0.00 0.00 4.17
1329 2754 2.074967 GGGGGACTTGTCCATGACA 58.925 57.895 19.90 0.00 41.09 3.58
1412 2886 4.744795 ACATAATCAACGGAGCTTCTCT 57.255 40.909 0.00 0.00 0.00 3.10
1413 2887 5.220681 GGAAACATAATCAACGGAGCTTCTC 60.221 44.000 0.00 0.00 0.00 2.87
1415 2889 4.636206 AGGAAACATAATCAACGGAGCTTC 59.364 41.667 0.00 0.00 0.00 3.86
1416 2890 4.589908 AGGAAACATAATCAACGGAGCTT 58.410 39.130 0.00 0.00 0.00 3.74
1417 2891 4.222124 AGGAAACATAATCAACGGAGCT 57.778 40.909 0.00 0.00 0.00 4.09
1418 2892 4.272748 GGTAGGAAACATAATCAACGGAGC 59.727 45.833 0.00 0.00 0.00 4.70
1528 6552 7.666388 TCCGGTAGTAAAATTTCCTTGATTTCA 59.334 33.333 0.00 0.00 0.00 2.69
1529 6553 8.047413 TCCGGTAGTAAAATTTCCTTGATTTC 57.953 34.615 0.00 0.00 0.00 2.17
1530 6554 8.411991 TTCCGGTAGTAAAATTTCCTTGATTT 57.588 30.769 0.00 0.00 0.00 2.17
1532 6556 7.614192 ACATTCCGGTAGTAAAATTTCCTTGAT 59.386 33.333 0.00 0.00 0.00 2.57
1534 6558 7.027161 CACATTCCGGTAGTAAAATTTCCTTG 58.973 38.462 0.00 0.00 0.00 3.61
1538 6573 8.671028 ACATACACATTCCGGTAGTAAAATTTC 58.329 33.333 0.00 0.00 0.00 2.17
1539 6574 8.455682 CACATACACATTCCGGTAGTAAAATTT 58.544 33.333 0.00 0.00 0.00 1.82
1550 6585 4.034394 CAGATCAACACATACACATTCCGG 59.966 45.833 0.00 0.00 0.00 5.14
1551 6586 4.869861 TCAGATCAACACATACACATTCCG 59.130 41.667 0.00 0.00 0.00 4.30
1575 6610 9.305925 GATTTTAATCTATGGTTTGAAGCCAAG 57.694 33.333 4.50 4.61 34.69 3.61
1587 6622 7.518370 CGTTTCTCCCACGATTTTAATCTATGG 60.518 40.741 12.36 12.36 40.20 2.74
1588 6623 7.223971 TCGTTTCTCCCACGATTTTAATCTATG 59.776 37.037 0.00 0.32 41.66 2.23
1590 6625 6.632909 TCGTTTCTCCCACGATTTTAATCTA 58.367 36.000 0.00 0.00 41.66 1.98
1591 6626 5.484715 TCGTTTCTCCCACGATTTTAATCT 58.515 37.500 0.00 0.00 41.66 2.40
1592 6627 5.789710 TCGTTTCTCCCACGATTTTAATC 57.210 39.130 0.00 0.00 41.66 1.75
1601 6636 0.094730 GCGAAATCGTTTCTCCCACG 59.905 55.000 4.59 0.00 42.22 4.94
1602 6637 0.094730 CGCGAAATCGTTTCTCCCAC 59.905 55.000 0.00 0.00 42.22 4.61
1603 6638 1.017177 CCGCGAAATCGTTTCTCCCA 61.017 55.000 8.23 0.00 42.22 4.37
1604 6639 1.713830 CCGCGAAATCGTTTCTCCC 59.286 57.895 8.23 0.00 42.22 4.30
1605 6640 1.060465 GCCGCGAAATCGTTTCTCC 59.940 57.895 8.23 1.10 42.22 3.71
1606 6641 1.295930 CGCCGCGAAATCGTTTCTC 60.296 57.895 8.23 1.46 42.22 2.87
1607 6642 2.776072 CGCCGCGAAATCGTTTCT 59.224 55.556 8.23 0.00 42.22 2.52
1608 6643 2.937502 GCGCCGCGAAATCGTTTC 60.938 61.111 18.91 0.00 42.22 2.78
1609 6644 4.454717 GGCGCCGCGAAATCGTTT 62.455 61.111 18.91 0.00 42.22 3.60
1624 6659 0.833834 TATAGCTGCTGGGAGAGGGC 60.834 60.000 13.43 0.00 0.00 5.19
1625 6660 1.265236 CTATAGCTGCTGGGAGAGGG 58.735 60.000 13.43 0.00 0.00 4.30
1626 6661 0.607620 GCTATAGCTGCTGGGAGAGG 59.392 60.000 17.75 0.00 38.21 3.69
1627 6662 0.243365 CGCTATAGCTGCTGGGAGAG 59.757 60.000 21.98 4.64 39.32 3.20
1628 6663 1.181741 CCGCTATAGCTGCTGGGAGA 61.182 60.000 21.98 0.00 39.32 3.71
1629 6664 1.291588 CCGCTATAGCTGCTGGGAG 59.708 63.158 21.98 7.61 39.32 4.30
1630 6665 2.872388 GCCGCTATAGCTGCTGGGA 61.872 63.158 27.86 0.00 45.80 4.37
1631 6666 2.358003 GCCGCTATAGCTGCTGGG 60.358 66.667 27.86 19.26 45.80 4.45
1632 6667 2.736236 CGCCGCTATAGCTGCTGG 60.736 66.667 30.41 21.26 46.84 4.85
1633 6668 2.736236 CCGCCGCTATAGCTGCTG 60.736 66.667 30.41 23.49 46.84 4.41
1634 6669 4.671569 GCCGCCGCTATAGCTGCT 62.672 66.667 30.41 7.57 46.84 4.24
1636 6671 2.225791 TATGGCCGCCGCTATAGCTG 62.226 60.000 21.98 16.77 37.40 4.24
1637 6672 1.949847 CTATGGCCGCCGCTATAGCT 61.950 60.000 21.98 3.75 45.87 3.32
1638 6673 1.519455 CTATGGCCGCCGCTATAGC 60.519 63.158 15.09 15.09 45.87 2.97
1639 6674 4.814900 CTATGGCCGCCGCTATAG 57.185 61.111 14.09 14.09 46.25 1.31
1640 6675 1.589630 CACTATGGCCGCCGCTATA 59.410 57.895 4.58 3.35 37.40 1.31
1641 6676 2.343758 CACTATGGCCGCCGCTAT 59.656 61.111 4.58 1.13 39.82 2.97
1642 6677 3.923864 CCACTATGGCCGCCGCTA 61.924 66.667 4.58 0.00 34.44 4.26
1651 6686 1.447317 GCCGTGATTGCCCACTATGG 61.447 60.000 0.00 0.00 37.25 2.74
1652 6687 0.747644 TGCCGTGATTGCCCACTATG 60.748 55.000 0.00 0.00 35.02 2.23
1653 6688 0.034574 TTGCCGTGATTGCCCACTAT 60.035 50.000 0.00 0.00 35.02 2.12
1654 6689 0.250945 TTTGCCGTGATTGCCCACTA 60.251 50.000 0.00 0.00 35.02 2.74
1655 6690 0.899717 ATTTGCCGTGATTGCCCACT 60.900 50.000 0.00 0.00 35.02 4.00
1656 6691 0.814457 TATTTGCCGTGATTGCCCAC 59.186 50.000 0.00 0.00 0.00 4.61
1657 6692 1.102154 CTATTTGCCGTGATTGCCCA 58.898 50.000 0.00 0.00 0.00 5.36
1658 6693 0.249031 GCTATTTGCCGTGATTGCCC 60.249 55.000 0.00 0.00 35.15 5.36
1659 6694 0.592247 CGCTATTTGCCGTGATTGCC 60.592 55.000 0.00 0.00 38.78 4.52
1660 6695 0.376852 TCGCTATTTGCCGTGATTGC 59.623 50.000 0.00 0.00 38.78 3.56
1661 6696 2.351418 TCTTCGCTATTTGCCGTGATTG 59.649 45.455 0.00 0.00 38.78 2.67
1662 6697 2.627945 TCTTCGCTATTTGCCGTGATT 58.372 42.857 0.00 0.00 38.78 2.57
1663 6698 2.309528 TCTTCGCTATTTGCCGTGAT 57.690 45.000 0.00 0.00 38.78 3.06
1664 6699 2.309528 ATCTTCGCTATTTGCCGTGA 57.690 45.000 0.00 0.00 38.78 4.35
1665 6700 3.405170 AAATCTTCGCTATTTGCCGTG 57.595 42.857 0.00 0.00 38.78 4.94
1666 6701 4.434713 AAAAATCTTCGCTATTTGCCGT 57.565 36.364 0.00 0.00 38.78 5.68
1685 6720 6.041523 CCAAAAGTTATCTCTCCCACCAAAAA 59.958 38.462 0.00 0.00 0.00 1.94
1686 6721 5.538433 CCAAAAGTTATCTCTCCCACCAAAA 59.462 40.000 0.00 0.00 0.00 2.44
1687 6722 5.076873 CCAAAAGTTATCTCTCCCACCAAA 58.923 41.667 0.00 0.00 0.00 3.28
1688 6723 4.352595 TCCAAAAGTTATCTCTCCCACCAA 59.647 41.667 0.00 0.00 0.00 3.67
1689 6724 3.913799 TCCAAAAGTTATCTCTCCCACCA 59.086 43.478 0.00 0.00 0.00 4.17
1690 6725 4.518249 CTCCAAAAGTTATCTCTCCCACC 58.482 47.826 0.00 0.00 0.00 4.61
1691 6726 4.518249 CCTCCAAAAGTTATCTCTCCCAC 58.482 47.826 0.00 0.00 0.00 4.61
1692 6727 3.523564 CCCTCCAAAAGTTATCTCTCCCA 59.476 47.826 0.00 0.00 0.00 4.37
1693 6728 3.523972 ACCCTCCAAAAGTTATCTCTCCC 59.476 47.826 0.00 0.00 0.00 4.30
1694 6729 4.846168 ACCCTCCAAAAGTTATCTCTCC 57.154 45.455 0.00 0.00 0.00 3.71
1695 6730 6.570571 GCAAAACCCTCCAAAAGTTATCTCTC 60.571 42.308 0.00 0.00 0.00 3.20
1696 6731 5.243954 GCAAAACCCTCCAAAAGTTATCTCT 59.756 40.000 0.00 0.00 0.00 3.10
1697 6732 5.243954 AGCAAAACCCTCCAAAAGTTATCTC 59.756 40.000 0.00 0.00 0.00 2.75
1698 6733 5.011023 CAGCAAAACCCTCCAAAAGTTATCT 59.989 40.000 0.00 0.00 0.00 1.98
1699 6734 5.010617 TCAGCAAAACCCTCCAAAAGTTATC 59.989 40.000 0.00 0.00 0.00 1.75
1700 6735 4.898861 TCAGCAAAACCCTCCAAAAGTTAT 59.101 37.500 0.00 0.00 0.00 1.89
1701 6736 4.282496 TCAGCAAAACCCTCCAAAAGTTA 58.718 39.130 0.00 0.00 0.00 2.24
1702 6737 3.103742 TCAGCAAAACCCTCCAAAAGTT 58.896 40.909 0.00 0.00 0.00 2.66
1703 6738 2.745968 TCAGCAAAACCCTCCAAAAGT 58.254 42.857 0.00 0.00 0.00 2.66
1704 6739 4.341366 AATCAGCAAAACCCTCCAAAAG 57.659 40.909 0.00 0.00 0.00 2.27
1705 6740 4.408596 AGAAATCAGCAAAACCCTCCAAAA 59.591 37.500 0.00 0.00 0.00 2.44
1706 6741 3.966665 AGAAATCAGCAAAACCCTCCAAA 59.033 39.130 0.00 0.00 0.00 3.28
1707 6742 3.321682 CAGAAATCAGCAAAACCCTCCAA 59.678 43.478 0.00 0.00 0.00 3.53
1708 6743 2.892852 CAGAAATCAGCAAAACCCTCCA 59.107 45.455 0.00 0.00 0.00 3.86
1709 6744 3.157087 TCAGAAATCAGCAAAACCCTCC 58.843 45.455 0.00 0.00 0.00 4.30
1710 6745 3.366781 GCTCAGAAATCAGCAAAACCCTC 60.367 47.826 0.00 0.00 35.56 4.30
1711 6746 2.560105 GCTCAGAAATCAGCAAAACCCT 59.440 45.455 0.00 0.00 35.56 4.34
1712 6747 2.297033 TGCTCAGAAATCAGCAAAACCC 59.703 45.455 0.00 0.00 42.74 4.11
1713 6748 3.648339 TGCTCAGAAATCAGCAAAACC 57.352 42.857 0.00 0.00 42.74 3.27
1719 6754 4.552378 CGCTCTAAATGCTCAGAAATCAGC 60.552 45.833 0.00 0.00 36.08 4.26
1720 6755 4.807834 TCGCTCTAAATGCTCAGAAATCAG 59.192 41.667 0.00 0.00 0.00 2.90
1721 6756 4.758688 TCGCTCTAAATGCTCAGAAATCA 58.241 39.130 0.00 0.00 0.00 2.57
1722 6757 4.210955 CCTCGCTCTAAATGCTCAGAAATC 59.789 45.833 0.00 0.00 0.00 2.17
1723 6758 4.125703 CCTCGCTCTAAATGCTCAGAAAT 58.874 43.478 0.00 0.00 0.00 2.17
1724 6759 3.525537 CCTCGCTCTAAATGCTCAGAAA 58.474 45.455 0.00 0.00 0.00 2.52
1725 6760 2.159043 CCCTCGCTCTAAATGCTCAGAA 60.159 50.000 0.00 0.00 0.00 3.02
1726 6761 1.410517 CCCTCGCTCTAAATGCTCAGA 59.589 52.381 0.00 0.00 0.00 3.27
1727 6762 1.410517 TCCCTCGCTCTAAATGCTCAG 59.589 52.381 0.00 0.00 0.00 3.35
1728 6763 1.485124 TCCCTCGCTCTAAATGCTCA 58.515 50.000 0.00 0.00 0.00 4.26
1729 6764 2.829741 ATCCCTCGCTCTAAATGCTC 57.170 50.000 0.00 0.00 0.00 4.26
1730 6765 3.580458 ACATATCCCTCGCTCTAAATGCT 59.420 43.478 0.00 0.00 0.00 3.79
1731 6766 3.681897 CACATATCCCTCGCTCTAAATGC 59.318 47.826 0.00 0.00 0.00 3.56
1732 6767 4.021104 TCCACATATCCCTCGCTCTAAATG 60.021 45.833 0.00 0.00 0.00 2.32
1733 6768 4.160329 TCCACATATCCCTCGCTCTAAAT 58.840 43.478 0.00 0.00 0.00 1.40
1734 6769 3.572642 TCCACATATCCCTCGCTCTAAA 58.427 45.455 0.00 0.00 0.00 1.85
1735 6770 3.238788 TCCACATATCCCTCGCTCTAA 57.761 47.619 0.00 0.00 0.00 2.10
1736 6771 2.971901 TCCACATATCCCTCGCTCTA 57.028 50.000 0.00 0.00 0.00 2.43
1737 6772 1.967066 CTTCCACATATCCCTCGCTCT 59.033 52.381 0.00 0.00 0.00 4.09
1738 6773 1.964223 TCTTCCACATATCCCTCGCTC 59.036 52.381 0.00 0.00 0.00 5.03
1739 6774 2.088104 TCTTCCACATATCCCTCGCT 57.912 50.000 0.00 0.00 0.00 4.93
1740 6775 3.409026 AATCTTCCACATATCCCTCGC 57.591 47.619 0.00 0.00 0.00 5.03
1741 6776 3.990469 CGAAATCTTCCACATATCCCTCG 59.010 47.826 0.00 0.00 0.00 4.63
1742 6777 3.748568 GCGAAATCTTCCACATATCCCTC 59.251 47.826 0.00 0.00 0.00 4.30
1743 6778 3.744660 GCGAAATCTTCCACATATCCCT 58.255 45.455 0.00 0.00 0.00 4.20
1744 6779 2.480419 CGCGAAATCTTCCACATATCCC 59.520 50.000 0.00 0.00 0.00 3.85
1745 6780 2.480419 CCGCGAAATCTTCCACATATCC 59.520 50.000 8.23 0.00 0.00 2.59
1746 6781 2.096218 GCCGCGAAATCTTCCACATATC 60.096 50.000 8.23 0.00 0.00 1.63
1747 6782 1.873591 GCCGCGAAATCTTCCACATAT 59.126 47.619 8.23 0.00 0.00 1.78
1748 6783 1.295792 GCCGCGAAATCTTCCACATA 58.704 50.000 8.23 0.00 0.00 2.29
1749 6784 0.676466 TGCCGCGAAATCTTCCACAT 60.676 50.000 8.23 0.00 0.00 3.21
1750 6785 1.298157 CTGCCGCGAAATCTTCCACA 61.298 55.000 8.23 0.00 0.00 4.17
1751 6786 1.425428 CTGCCGCGAAATCTTCCAC 59.575 57.895 8.23 0.00 0.00 4.02
1752 6787 2.398554 GCTGCCGCGAAATCTTCCA 61.399 57.895 8.23 0.00 0.00 3.53
1753 6788 2.315038 CTGCTGCCGCGAAATCTTCC 62.315 60.000 8.23 0.00 39.65 3.46
1754 6789 1.061570 CTGCTGCCGCGAAATCTTC 59.938 57.895 8.23 0.00 39.65 2.87
1755 6790 1.375908 TCTGCTGCCGCGAAATCTT 60.376 52.632 8.23 0.00 39.65 2.40
1756 6791 2.103042 GTCTGCTGCCGCGAAATCT 61.103 57.895 8.23 0.00 39.65 2.40
1757 6792 1.709147 ATGTCTGCTGCCGCGAAATC 61.709 55.000 8.23 0.00 39.65 2.17
1758 6793 0.461870 TATGTCTGCTGCCGCGAAAT 60.462 50.000 8.23 0.00 39.65 2.17
1759 6794 1.079474 TATGTCTGCTGCCGCGAAA 60.079 52.632 8.23 0.00 39.65 3.46
1760 6795 1.519234 CTATGTCTGCTGCCGCGAA 60.519 57.895 8.23 0.00 39.65 4.70
1761 6796 2.104928 CTATGTCTGCTGCCGCGA 59.895 61.111 8.23 0.00 39.65 5.87
1762 6797 3.634072 GCTATGTCTGCTGCCGCG 61.634 66.667 0.00 0.00 39.65 6.46
1763 6798 0.601046 TATGCTATGTCTGCTGCCGC 60.601 55.000 0.00 0.00 0.00 6.53
1764 6799 1.426423 CTATGCTATGTCTGCTGCCG 58.574 55.000 0.00 0.00 0.00 5.69
1765 6800 1.155042 GCTATGCTATGTCTGCTGCC 58.845 55.000 0.00 0.00 0.00 4.85
1766 6801 0.788995 CGCTATGCTATGTCTGCTGC 59.211 55.000 0.00 0.00 0.00 5.25
1767 6802 1.426423 CCGCTATGCTATGTCTGCTG 58.574 55.000 0.00 0.00 0.00 4.41
1768 6803 0.320247 GCCGCTATGCTATGTCTGCT 60.320 55.000 0.00 0.00 0.00 4.24
1769 6804 0.601046 TGCCGCTATGCTATGTCTGC 60.601 55.000 0.00 0.00 0.00 4.26
1770 6805 1.797046 CTTGCCGCTATGCTATGTCTG 59.203 52.381 0.00 0.00 0.00 3.51
1771 6806 1.270518 CCTTGCCGCTATGCTATGTCT 60.271 52.381 0.00 0.00 0.00 3.41
1772 6807 1.151668 CCTTGCCGCTATGCTATGTC 58.848 55.000 0.00 0.00 0.00 3.06
1773 6808 0.886490 GCCTTGCCGCTATGCTATGT 60.886 55.000 0.00 0.00 0.00 2.29
1774 6809 0.604780 AGCCTTGCCGCTATGCTATG 60.605 55.000 2.98 0.00 37.32 2.23
1775 6810 0.321122 GAGCCTTGCCGCTATGCTAT 60.321 55.000 4.73 0.00 39.87 2.97
1776 6811 1.069765 GAGCCTTGCCGCTATGCTA 59.930 57.895 4.73 0.00 39.87 3.49
1777 6812 2.203126 GAGCCTTGCCGCTATGCT 60.203 61.111 4.42 4.42 39.87 3.79
1778 6813 3.282920 GGAGCCTTGCCGCTATGC 61.283 66.667 0.00 0.00 39.87 3.14
1779 6814 2.592861 GGGAGCCTTGCCGCTATG 60.593 66.667 0.00 0.00 39.87 2.23
1787 6822 2.599645 ATAGCTGCACGGGAGCCTTG 62.600 60.000 12.43 0.00 37.12 3.61
1788 6823 1.048724 TATAGCTGCACGGGAGCCTT 61.049 55.000 12.43 4.90 37.12 4.35
1789 6824 1.048724 TTATAGCTGCACGGGAGCCT 61.049 55.000 12.43 5.04 37.12 4.58
1790 6825 0.880718 GTTATAGCTGCACGGGAGCC 60.881 60.000 12.43 0.00 37.12 4.70
1791 6826 1.215655 CGTTATAGCTGCACGGGAGC 61.216 60.000 1.02 8.90 36.65 4.70
1792 6827 1.215655 GCGTTATAGCTGCACGGGAG 61.216 60.000 13.86 0.00 34.42 4.30
1793 6828 1.227147 GCGTTATAGCTGCACGGGA 60.227 57.895 13.86 0.00 34.42 5.14
1794 6829 1.490693 CTGCGTTATAGCTGCACGGG 61.491 60.000 13.86 0.00 38.13 5.28
1795 6830 1.927210 CTGCGTTATAGCTGCACGG 59.073 57.895 13.86 0.00 38.13 4.94
1811 6846 4.829064 TTAAAATAGCCCGCAATAGCTG 57.171 40.909 0.00 0.00 40.28 4.24
1812 6847 5.316987 AGATTAAAATAGCCCGCAATAGCT 58.683 37.500 0.00 0.00 43.20 3.32
1813 6848 5.629079 AGATTAAAATAGCCCGCAATAGC 57.371 39.130 0.00 0.00 37.42 2.97
1814 6849 7.066284 AGCATAGATTAAAATAGCCCGCAATAG 59.934 37.037 0.00 0.00 0.00 1.73
1815 6850 6.884295 AGCATAGATTAAAATAGCCCGCAATA 59.116 34.615 0.00 0.00 0.00 1.90
1816 6851 5.711976 AGCATAGATTAAAATAGCCCGCAAT 59.288 36.000 0.00 0.00 0.00 3.56
1817 6852 5.070001 AGCATAGATTAAAATAGCCCGCAA 58.930 37.500 0.00 0.00 0.00 4.85
1818 6853 4.651778 AGCATAGATTAAAATAGCCCGCA 58.348 39.130 0.00 0.00 0.00 5.69
1819 6854 5.181245 TGAAGCATAGATTAAAATAGCCCGC 59.819 40.000 0.00 0.00 0.00 6.13
1820 6855 6.801539 TGAAGCATAGATTAAAATAGCCCG 57.198 37.500 0.00 0.00 0.00 6.13
1821 6856 8.633561 AGTTTGAAGCATAGATTAAAATAGCCC 58.366 33.333 0.00 0.00 0.00 5.19
1828 6863 9.844790 CACATCAAGTTTGAAGCATAGATTAAA 57.155 29.630 0.00 0.00 41.13 1.52
1829 6864 7.970061 GCACATCAAGTTTGAAGCATAGATTAA 59.030 33.333 0.00 0.00 41.13 1.40
1830 6865 7.337689 AGCACATCAAGTTTGAAGCATAGATTA 59.662 33.333 15.02 0.00 41.13 1.75
1831 6866 6.152323 AGCACATCAAGTTTGAAGCATAGATT 59.848 34.615 15.02 0.00 41.13 2.40
1832 6867 5.651139 AGCACATCAAGTTTGAAGCATAGAT 59.349 36.000 15.02 0.00 41.13 1.98
1833 6868 5.005740 AGCACATCAAGTTTGAAGCATAGA 58.994 37.500 15.02 0.00 41.13 1.98
1834 6869 5.306532 AGCACATCAAGTTTGAAGCATAG 57.693 39.130 15.02 0.44 41.13 2.23
1835 6870 5.463286 CAAGCACATCAAGTTTGAAGCATA 58.537 37.500 15.02 0.00 41.13 3.14
1836 6871 4.304110 CAAGCACATCAAGTTTGAAGCAT 58.696 39.130 15.02 5.28 41.13 3.79
1837 6872 3.708890 CAAGCACATCAAGTTTGAAGCA 58.291 40.909 15.02 0.00 41.13 3.91
1838 6873 2.473984 GCAAGCACATCAAGTTTGAAGC 59.526 45.455 0.00 4.34 41.13 3.86
1839 6874 3.708890 TGCAAGCACATCAAGTTTGAAG 58.291 40.909 0.00 0.00 41.13 3.02
1843 6878 1.342174 CCCTGCAAGCACATCAAGTTT 59.658 47.619 0.00 0.00 0.00 2.66
1865 6905 1.609555 GCTATTCTCGACGGTCTCCAT 59.390 52.381 6.57 0.00 0.00 3.41
1871 6911 3.276857 TGAAGTAGCTATTCTCGACGGT 58.723 45.455 0.00 0.00 0.00 4.83
1872 6912 3.965292 TGAAGTAGCTATTCTCGACGG 57.035 47.619 0.00 0.00 0.00 4.79
1876 6916 5.998553 TCCGTTATGAAGTAGCTATTCTCG 58.001 41.667 0.00 6.57 0.00 4.04
1879 6919 6.207025 TCTCCTCCGTTATGAAGTAGCTATTC 59.793 42.308 0.00 3.05 0.00 1.75
1894 6934 3.057337 CCCACGTTCTCCTCCGTT 58.943 61.111 0.00 0.00 34.59 4.44
1984 7045 1.202533 CCGTTATTGTGGCTCTCCGAT 60.203 52.381 0.00 0.00 34.14 4.18
2003 7064 2.800736 GTTCATCACCATGCCGCC 59.199 61.111 0.00 0.00 0.00 6.13
2071 7132 4.057428 GTGTGGCCGCTCGAGTCT 62.057 66.667 18.96 0.00 0.00 3.24
2421 7482 0.816825 CCAGATGCCGACTTCCATGG 60.817 60.000 4.97 4.97 0.00 3.66
2445 7506 4.332637 CCACGCGCTTGCTTGCTT 62.333 61.111 5.73 0.00 36.60 3.91
2505 7566 3.055819 TGGACACTTATCTCCAGAGTTGC 60.056 47.826 0.00 0.00 32.49 4.17
2506 7567 4.808414 TGGACACTTATCTCCAGAGTTG 57.192 45.455 0.00 0.00 32.49 3.16
2507 7568 4.383552 GCATGGACACTTATCTCCAGAGTT 60.384 45.833 0.00 0.00 39.99 3.01
2508 7569 3.133721 GCATGGACACTTATCTCCAGAGT 59.866 47.826 0.00 0.00 39.99 3.24
2509 7570 3.726607 GCATGGACACTTATCTCCAGAG 58.273 50.000 0.00 0.00 39.99 3.35
2510 7571 2.101415 CGCATGGACACTTATCTCCAGA 59.899 50.000 0.00 0.00 39.99 3.86
2511 7572 2.159043 ACGCATGGACACTTATCTCCAG 60.159 50.000 0.00 0.00 39.99 3.86
2512 7573 1.831106 ACGCATGGACACTTATCTCCA 59.169 47.619 0.00 0.00 40.92 3.86
2513 7574 2.604046 ACGCATGGACACTTATCTCC 57.396 50.000 0.00 0.00 0.00 3.71
2514 7575 3.043586 CGTACGCATGGACACTTATCTC 58.956 50.000 0.52 0.00 0.00 2.75
2515 7576 2.426024 ACGTACGCATGGACACTTATCT 59.574 45.455 16.72 0.00 0.00 1.98
2516 7577 2.534349 CACGTACGCATGGACACTTATC 59.466 50.000 16.72 0.00 0.00 1.75
2517 7578 2.094390 ACACGTACGCATGGACACTTAT 60.094 45.455 16.72 0.00 0.00 1.73
2518 7579 1.270274 ACACGTACGCATGGACACTTA 59.730 47.619 16.72 0.00 0.00 2.24
2519 7580 0.032952 ACACGTACGCATGGACACTT 59.967 50.000 16.72 0.00 0.00 3.16
2525 7586 0.941936 TGACACACACGTACGCATGG 60.942 55.000 16.72 10.09 0.00 3.66
2527 7588 1.346365 GATGACACACACGTACGCAT 58.654 50.000 16.72 8.60 0.00 4.73
2533 7594 1.664649 CGCAGGATGACACACACGT 60.665 57.895 0.00 0.00 39.69 4.49
2541 7602 0.309922 CATGGCAATCGCAGGATGAC 59.690 55.000 0.00 0.00 39.69 3.06
2671 7755 4.119862 GCTGTAATTTCAGACGCCATAGA 58.880 43.478 15.52 0.00 37.61 1.98
2679 7763 6.090628 CACTGAAGAGAGCTGTAATTTCAGAC 59.909 42.308 25.77 8.48 42.38 3.51
2697 7781 6.020678 GGTCAAAATTGAAACGAACACTGAAG 60.021 38.462 0.00 0.00 39.21 3.02
2702 7786 6.396459 TTTGGTCAAAATTGAAACGAACAC 57.604 33.333 0.00 0.00 39.21 3.32
2703 7787 7.360438 CCTTTTTGGTCAAAATTGAAACGAACA 60.360 33.333 9.32 0.00 39.69 3.18
2704 7788 6.958752 CCTTTTTGGTCAAAATTGAAACGAAC 59.041 34.615 9.32 0.00 39.69 3.95
2705 7789 6.874134 TCCTTTTTGGTCAAAATTGAAACGAA 59.126 30.769 9.32 0.00 39.69 3.85
2706 7790 6.398918 TCCTTTTTGGTCAAAATTGAAACGA 58.601 32.000 9.32 0.00 39.69 3.85
2707 7791 6.312672 ACTCCTTTTTGGTCAAAATTGAAACG 59.687 34.615 9.32 0.00 39.69 3.60
2708 7792 7.609760 ACTCCTTTTTGGTCAAAATTGAAAC 57.390 32.000 9.32 0.00 39.69 2.78
2709 7793 8.628630 AAACTCCTTTTTGGTCAAAATTGAAA 57.371 26.923 9.32 0.00 39.69 2.69
2710 7794 7.335673 GGAAACTCCTTTTTGGTCAAAATTGAA 59.664 33.333 9.32 0.00 39.69 2.69
2711 7795 6.821160 GGAAACTCCTTTTTGGTCAAAATTGA 59.179 34.615 9.32 8.23 39.69 2.57
2712 7796 6.038161 GGGAAACTCCTTTTTGGTCAAAATTG 59.962 38.462 9.32 6.31 35.33 2.32
2713 7797 6.119536 GGGAAACTCCTTTTTGGTCAAAATT 58.880 36.000 9.32 1.08 35.33 1.82
2714 7798 5.397447 GGGGAAACTCCTTTTTGGTCAAAAT 60.397 40.000 9.32 0.00 35.33 1.82
2715 7799 4.080807 GGGGAAACTCCTTTTTGGTCAAAA 60.081 41.667 4.92 4.92 36.57 2.44
2716 7800 3.452990 GGGGAAACTCCTTTTTGGTCAAA 59.547 43.478 0.00 0.00 36.57 2.69
2717 7801 3.035363 GGGGAAACTCCTTTTTGGTCAA 58.965 45.455 0.00 0.00 36.57 3.18
2718 7802 2.673258 GGGGAAACTCCTTTTTGGTCA 58.327 47.619 0.00 0.00 36.57 4.02
2729 7813 1.674651 GTGAAGCCGGGGGAAACTC 60.675 63.158 2.18 0.00 0.00 3.01
2730 7814 2.434774 GTGAAGCCGGGGGAAACT 59.565 61.111 2.18 0.00 0.00 2.66
2731 7815 2.675423 GGTGAAGCCGGGGGAAAC 60.675 66.667 2.18 0.00 0.00 2.78
2732 7816 2.014033 AAAGGTGAAGCCGGGGGAAA 62.014 55.000 2.18 0.00 43.70 3.13
2733 7817 2.014033 AAAAGGTGAAGCCGGGGGAA 62.014 55.000 2.18 0.00 43.70 3.97
2734 7818 1.135068 TAAAAGGTGAAGCCGGGGGA 61.135 55.000 2.18 0.00 43.70 4.81
2735 7819 0.033503 ATAAAAGGTGAAGCCGGGGG 60.034 55.000 2.18 0.00 43.70 5.40
2736 7820 1.847328 AATAAAAGGTGAAGCCGGGG 58.153 50.000 2.18 0.00 43.70 5.73
2737 7821 4.703093 TCTTTAATAAAAGGTGAAGCCGGG 59.297 41.667 2.18 0.00 42.09 5.73
2738 7822 5.414765 ACTCTTTAATAAAAGGTGAAGCCGG 59.585 40.000 0.00 0.00 42.09 6.13
2739 7823 6.496338 ACTCTTTAATAAAAGGTGAAGCCG 57.504 37.500 0.00 0.00 42.09 5.52
2740 7824 9.011095 AGTAACTCTTTAATAAAAGGTGAAGCC 57.989 33.333 0.00 0.00 42.09 4.35
2754 7838 9.573166 GGGGTAAAAAGGTAAGTAACTCTTTAA 57.427 33.333 0.00 0.00 37.56 1.52
2755 7839 8.722422 TGGGGTAAAAAGGTAAGTAACTCTTTA 58.278 33.333 0.00 0.00 37.56 1.85
2756 7840 7.585440 TGGGGTAAAAAGGTAAGTAACTCTTT 58.415 34.615 0.00 0.00 37.56 2.52
2757 7841 7.152942 TGGGGTAAAAAGGTAAGTAACTCTT 57.847 36.000 0.00 0.00 39.89 2.85
2758 7842 6.768641 TGGGGTAAAAAGGTAAGTAACTCT 57.231 37.500 0.00 0.00 0.00 3.24
2759 7843 7.822161 TTTGGGGTAAAAAGGTAAGTAACTC 57.178 36.000 0.00 0.00 0.00 3.01
2760 7844 8.606754 TTTTTGGGGTAAAAAGGTAAGTAACT 57.393 30.769 0.00 0.00 41.88 2.24
2789 7873 8.303876 CCTACTGTGTTTGCTAATAAAAACCAT 58.696 33.333 0.00 0.00 35.80 3.55
2790 7874 7.255660 CCCTACTGTGTTTGCTAATAAAAACCA 60.256 37.037 0.00 0.00 35.80 3.67
2791 7875 7.088272 CCCTACTGTGTTTGCTAATAAAAACC 58.912 38.462 0.00 0.00 35.80 3.27
2792 7876 7.654568 ACCCTACTGTGTTTGCTAATAAAAAC 58.345 34.615 0.00 0.00 36.92 2.43
2793 7877 7.826918 ACCCTACTGTGTTTGCTAATAAAAA 57.173 32.000 0.00 0.00 0.00 1.94
2794 7878 8.921353 TTACCCTACTGTGTTTGCTAATAAAA 57.079 30.769 0.00 0.00 0.00 1.52
2795 7879 8.921353 TTTACCCTACTGTGTTTGCTAATAAA 57.079 30.769 0.00 0.00 0.00 1.40
2796 7880 8.921353 TTTTACCCTACTGTGTTTGCTAATAA 57.079 30.769 0.00 0.00 0.00 1.40
2797 7881 8.785946 GTTTTTACCCTACTGTGTTTGCTAATA 58.214 33.333 0.00 0.00 0.00 0.98
2798 7882 7.255695 GGTTTTTACCCTACTGTGTTTGCTAAT 60.256 37.037 0.00 0.00 0.00 1.73
2799 7883 6.039605 GGTTTTTACCCTACTGTGTTTGCTAA 59.960 38.462 0.00 0.00 0.00 3.09
2800 7884 5.532032 GGTTTTTACCCTACTGTGTTTGCTA 59.468 40.000 0.00 0.00 0.00 3.49
2801 7885 4.340097 GGTTTTTACCCTACTGTGTTTGCT 59.660 41.667 0.00 0.00 0.00 3.91
2802 7886 4.500205 GGGTTTTTACCCTACTGTGTTTGC 60.500 45.833 6.11 0.00 46.39 3.68
2803 7887 5.190992 GGGTTTTTACCCTACTGTGTTTG 57.809 43.478 6.11 0.00 46.39 2.93
2815 7899 8.803397 ATCAGAGTTACAATAGGGTTTTTACC 57.197 34.615 0.00 0.00 0.00 2.85
2820 7904 9.362151 TGAAAAATCAGAGTTACAATAGGGTTT 57.638 29.630 0.00 0.00 0.00 3.27
2821 7905 8.934023 TGAAAAATCAGAGTTACAATAGGGTT 57.066 30.769 0.00 0.00 0.00 4.11
2822 7906 9.533831 AATGAAAAATCAGAGTTACAATAGGGT 57.466 29.630 0.00 0.00 0.00 4.34
2852 7936 9.933723 ACTAAGATTTAACACAACCGTATTAGT 57.066 29.630 0.00 0.00 0.00 2.24
2854 7938 9.075519 CGACTAAGATTTAACACAACCGTATTA 57.924 33.333 0.00 0.00 0.00 0.98
2855 7939 7.814107 TCGACTAAGATTTAACACAACCGTATT 59.186 33.333 0.00 0.00 0.00 1.89
2856 7940 7.274250 GTCGACTAAGATTTAACACAACCGTAT 59.726 37.037 8.70 0.00 0.00 3.06
2857 7941 6.582295 GTCGACTAAGATTTAACACAACCGTA 59.418 38.462 8.70 0.00 0.00 4.02
2875 7959 8.789825 AGACTTTACTAAATCTCAGTCGACTA 57.210 34.615 19.57 2.81 36.56 2.59
2905 7989 0.539986 TGATTGGCTAACCTCGGTCC 59.460 55.000 0.00 0.00 36.63 4.46
2940 8024 7.138081 CACAAGCAAACATAGACAATAACACA 58.862 34.615 0.00 0.00 0.00 3.72
2942 8026 6.148948 GCACAAGCAAACATAGACAATAACA 58.851 36.000 0.00 0.00 41.58 2.41
2959 8043 1.398390 CGATAGAAACAGGGCACAAGC 59.602 52.381 0.00 0.00 38.27 4.01
2962 8046 2.418197 GCTACGATAGAAACAGGGCACA 60.418 50.000 0.00 0.00 41.38 4.57
2963 8047 2.202566 GCTACGATAGAAACAGGGCAC 58.797 52.381 0.00 0.00 41.38 5.01
2964 8048 1.828595 TGCTACGATAGAAACAGGGCA 59.171 47.619 0.00 0.00 41.38 5.36
2977 8061 2.646175 GGCCCACTGTCTGCTACGA 61.646 63.158 0.00 0.00 0.00 3.43
2988 8072 1.604593 GCACAACTGATGGCCCACT 60.605 57.895 0.00 0.00 0.00 4.00
2993 8077 1.081242 CAACGGCACAACTGATGGC 60.081 57.895 0.00 0.00 39.18 4.40
3031 8115 1.767759 CCCACATAGAAAAGGCCCAG 58.232 55.000 0.00 0.00 0.00 4.45
3143 8227 8.423906 AAGAAAGAGGAGAGTAAACATCTACA 57.576 34.615 0.00 0.00 29.21 2.74
3171 8255 6.206634 AGGAGAGTAAACATCATTCGCAAAAA 59.793 34.615 0.00 0.00 0.00 1.94
3172 8256 5.705441 AGGAGAGTAAACATCATTCGCAAAA 59.295 36.000 0.00 0.00 0.00 2.44
3173 8257 5.245531 AGGAGAGTAAACATCATTCGCAAA 58.754 37.500 0.00 0.00 0.00 3.68
3174 8258 4.832248 AGGAGAGTAAACATCATTCGCAA 58.168 39.130 0.00 0.00 0.00 4.85
3175 8259 4.160439 AGAGGAGAGTAAACATCATTCGCA 59.840 41.667 0.00 0.00 0.00 5.10
3176 8260 4.688021 AGAGGAGAGTAAACATCATTCGC 58.312 43.478 0.00 0.00 0.00 4.70
3177 8261 6.796426 TGTAGAGGAGAGTAAACATCATTCG 58.204 40.000 0.00 0.00 0.00 3.34
3178 8262 8.470805 TCTTGTAGAGGAGAGTAAACATCATTC 58.529 37.037 0.00 0.00 0.00 2.67
3179 8263 8.367660 TCTTGTAGAGGAGAGTAAACATCATT 57.632 34.615 0.00 0.00 0.00 2.57
3180 8264 7.417342 GCTCTTGTAGAGGAGAGTAAACATCAT 60.417 40.741 2.90 0.00 42.54 2.45
3181 8265 6.127591 GCTCTTGTAGAGGAGAGTAAACATCA 60.128 42.308 2.90 0.00 42.54 3.07
3182 8266 6.127591 TGCTCTTGTAGAGGAGAGTAAACATC 60.128 42.308 2.90 0.00 42.54 3.06
3183 8267 5.717178 TGCTCTTGTAGAGGAGAGTAAACAT 59.283 40.000 2.90 0.00 42.54 2.71
3184 8268 5.077564 TGCTCTTGTAGAGGAGAGTAAACA 58.922 41.667 2.90 0.00 42.54 2.83
3185 8269 5.646577 TGCTCTTGTAGAGGAGAGTAAAC 57.353 43.478 2.90 0.00 42.54 2.01
3186 8270 5.952347 TCATGCTCTTGTAGAGGAGAGTAAA 59.048 40.000 2.90 0.00 45.86 2.01
3187 8271 5.510430 TCATGCTCTTGTAGAGGAGAGTAA 58.490 41.667 2.90 0.00 45.86 2.24
3235 8319 9.640952 TTTCCTCCTTACATTAATTCATAAGGG 57.359 33.333 20.18 14.33 42.66 3.95
3351 8438 9.877137 CAAGTTATGCGCTGTTTAAATATATCA 57.123 29.630 9.73 0.00 0.00 2.15
3352 8439 9.878599 ACAAGTTATGCGCTGTTTAAATATATC 57.121 29.630 9.73 0.00 0.00 1.63
3354 8441 9.497030 CAACAAGTTATGCGCTGTTTAAATATA 57.503 29.630 9.73 0.00 0.00 0.86
3355 8442 8.026607 ACAACAAGTTATGCGCTGTTTAAATAT 58.973 29.630 9.73 0.00 0.00 1.28


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.