Multiple sequence alignment - TraesCS2A01G562400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G562400 chr2A 100.000 3936 0 0 1 3936 763455992 763452057 0.000000e+00 7269
1 TraesCS2A01G562400 chr2A 92.647 204 15 0 1229 1432 763396984 763396781 1.070000e-75 294
2 TraesCS2A01G562400 chr2D 92.487 1584 85 14 1024 2601 638438076 638439631 0.000000e+00 2235
3 TraesCS2A01G562400 chr2D 85.438 1655 113 49 1024 2596 638507098 638505490 0.000000e+00 1604
4 TraesCS2A01G562400 chr2D 88.010 392 44 2 2629 3020 638505413 638505025 9.970000e-126 460
5 TraesCS2A01G562400 chr2D 87.728 383 47 0 2615 2997 638439696 638440078 7.760000e-122 448
6 TraesCS2A01G562400 chr2D 84.855 449 48 11 3304 3739 638444777 638445218 6.040000e-118 435
7 TraesCS2A01G562400 chr2D 82.933 375 39 9 3307 3672 638461183 638460825 8.210000e-82 315
8 TraesCS2A01G562400 chr2D 90.217 184 9 3 3005 3179 638444601 638444784 8.510000e-57 231
9 TraesCS2A01G562400 chr2B 86.915 1582 137 38 1024 2589 797464240 797465767 0.000000e+00 1711
10 TraesCS2A01G562400 chr2B 84.134 1582 145 58 400 1942 785942388 785943902 0.000000e+00 1434
11 TraesCS2A01G562400 chr2B 82.316 967 113 34 1303 2237 797707707 797708647 0.000000e+00 785
12 TraesCS2A01G562400 chr2B 88.811 572 38 10 2031 2601 785943947 785944493 0.000000e+00 678
13 TraesCS2A01G562400 chr2B 86.785 507 49 14 2629 3120 785944568 785945071 2.070000e-152 549
14 TraesCS2A01G562400 chr2B 86.680 488 42 15 2629 3097 797465885 797466368 1.620000e-143 520
15 TraesCS2A01G562400 chr2B 81.037 675 71 30 650 1307 797705864 797706498 5.910000e-133 484
16 TraesCS2A01G562400 chr2B 81.433 307 47 8 2282 2579 797708750 797709055 3.930000e-60 243
17 TraesCS2A01G562400 chr2B 85.581 215 22 6 412 623 797705659 797705867 2.380000e-52 217
18 TraesCS2A01G562400 chr1D 79.251 1041 156 30 1228 2236 468990220 468989208 0.000000e+00 671
19 TraesCS2A01G562400 chr1D 83.429 525 73 7 2068 2579 189820149 189819626 3.560000e-130 475
20 TraesCS2A01G562400 chrUn 87.179 546 61 3 1 543 286973716 286973177 2.600000e-171 612
21 TraesCS2A01G562400 chr5D 87.066 518 59 6 1076 1592 87429782 87429272 2.640000e-161 579
22 TraesCS2A01G562400 chr5D 80.430 419 59 14 1825 2232 87428991 87428585 8.270000e-77 298
23 TraesCS2A01G562400 chr3B 76.993 765 122 22 1505 2236 505027860 505027117 4.770000e-104 388
24 TraesCS2A01G562400 chr3B 81.026 390 54 10 1072 1456 505029910 505029536 3.850000e-75 292
25 TraesCS2A01G562400 chr3B 92.222 90 6 1 2460 2549 505025483 505025395 4.130000e-25 126
26 TraesCS2A01G562400 chr3D 81.144 472 63 11 2629 3083 593071603 593071141 4.840000e-94 355
27 TraesCS2A01G562400 chr3D 86.829 205 25 2 2384 2587 593071900 593071697 1.100000e-55 228
28 TraesCS2A01G562400 chr5B 79.217 332 54 5 1321 1637 128355874 128356205 2.380000e-52 217
29 TraesCS2A01G562400 chr1B 78.012 332 58 6 1321 1637 629830547 629830878 1.120000e-45 195


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G562400 chr2A 763452057 763455992 3935 True 7269.000000 7269 100.000000 1 3936 1 chr2A.!!$R2 3935
1 TraesCS2A01G562400 chr2D 638438076 638440078 2002 False 1341.500000 2235 90.107500 1024 2997 2 chr2D.!!$F1 1973
2 TraesCS2A01G562400 chr2D 638505025 638507098 2073 True 1032.000000 1604 86.724000 1024 3020 2 chr2D.!!$R2 1996
3 TraesCS2A01G562400 chr2D 638444601 638445218 617 False 333.000000 435 87.536000 3005 3739 2 chr2D.!!$F2 734
4 TraesCS2A01G562400 chr2B 797464240 797466368 2128 False 1115.500000 1711 86.797500 1024 3097 2 chr2B.!!$F2 2073
5 TraesCS2A01G562400 chr2B 785942388 785945071 2683 False 887.000000 1434 86.576667 400 3120 3 chr2B.!!$F1 2720
6 TraesCS2A01G562400 chr2B 797705659 797709055 3396 False 432.250000 785 82.591750 412 2579 4 chr2B.!!$F3 2167
7 TraesCS2A01G562400 chr1D 468989208 468990220 1012 True 671.000000 671 79.251000 1228 2236 1 chr1D.!!$R2 1008
8 TraesCS2A01G562400 chr1D 189819626 189820149 523 True 475.000000 475 83.429000 2068 2579 1 chr1D.!!$R1 511
9 TraesCS2A01G562400 chrUn 286973177 286973716 539 True 612.000000 612 87.179000 1 543 1 chrUn.!!$R1 542
10 TraesCS2A01G562400 chr5D 87428585 87429782 1197 True 438.500000 579 83.748000 1076 2232 2 chr5D.!!$R1 1156
11 TraesCS2A01G562400 chr3B 505025395 505029910 4515 True 268.666667 388 83.413667 1072 2549 3 chr3B.!!$R1 1477
12 TraesCS2A01G562400 chr3D 593071141 593071900 759 True 291.500000 355 83.986500 2384 3083 2 chr3D.!!$R1 699

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
780 806 0.241749 TTGTGTACGTGGCTAGGACG 59.758 55.0 0.00 0.00 42.62 4.79 F
953 998 0.248743 TGACGTGTCAACTGTCGACC 60.249 55.0 14.12 0.00 36.53 4.79 F
1666 4630 0.319555 TAGCCGTGTTCAGCAGACAC 60.320 55.0 7.07 7.07 0.00 3.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1946 5035 0.033011 TACCCTCCTCTGCTCCACTC 60.033 60.0 0.0 0.0 0.00 3.51 R
1950 5039 0.107643 GCATTACCCTCCTCTGCTCC 59.892 60.0 0.0 0.0 0.00 4.70 R
3410 8129 0.033228 GCTAGCGATGGATGCTGAGT 59.967 55.0 0.0 0.0 43.85 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 2.636830 CGCCTGGATTCTTGACATCTT 58.363 47.619 0.00 0.00 0.00 2.40
38 39 5.197224 TGGATTCTTGACATCTTGGGATT 57.803 39.130 0.00 0.00 0.00 3.01
46 47 3.591527 TGACATCTTGGGATTACTTGGGT 59.408 43.478 0.00 0.00 0.00 4.51
47 48 4.200092 GACATCTTGGGATTACTTGGGTC 58.800 47.826 0.00 0.00 0.00 4.46
49 50 2.542550 TCTTGGGATTACTTGGGTCGA 58.457 47.619 0.00 0.00 0.00 4.20
80 81 3.181501 ACCGAATATGTTGACATTTGGCG 60.182 43.478 1.46 3.33 38.71 5.69
89 90 0.878416 GACATTTGGCGCCAACTACA 59.122 50.000 40.36 26.69 35.46 2.74
91 92 1.892474 ACATTTGGCGCCAACTACAAT 59.108 42.857 40.36 27.32 35.46 2.71
93 94 3.128589 ACATTTGGCGCCAACTACAATAG 59.871 43.478 40.36 23.17 35.46 1.73
118 119 4.314440 TCACACCGCAGCCAGACC 62.314 66.667 0.00 0.00 0.00 3.85
133 134 0.469917 AGACCCGATTCAATGGCGAT 59.530 50.000 0.00 0.00 0.00 4.58
137 138 0.588252 CCGATTCAATGGCGATGGAC 59.412 55.000 0.00 0.00 0.00 4.02
139 140 1.528586 CGATTCAATGGCGATGGACTC 59.471 52.381 0.00 0.00 0.00 3.36
146 147 1.080093 GGCGATGGACTCACAACGA 60.080 57.895 0.00 0.00 38.69 3.85
199 200 3.504520 GCATTTCTTGGGTTTTACCTCGA 59.495 43.478 0.00 0.00 38.64 4.04
228 229 1.628846 TGGCTCCTAGTTTGGAAGACC 59.371 52.381 0.00 0.00 35.43 3.85
229 230 1.065345 GGCTCCTAGTTTGGAAGACCC 60.065 57.143 0.00 0.00 35.43 4.46
230 231 1.628846 GCTCCTAGTTTGGAAGACCCA 59.371 52.381 0.00 0.00 44.93 4.51
251 252 0.530744 GCCCCCTTTCGGTCAAATTC 59.469 55.000 0.00 0.00 0.00 2.17
258 259 4.437390 CCCTTTCGGTCAAATTCTTCATCG 60.437 45.833 0.00 0.00 0.00 3.84
259 260 4.437390 CCTTTCGGTCAAATTCTTCATCGG 60.437 45.833 0.00 0.00 0.00 4.18
260 261 2.006888 TCGGTCAAATTCTTCATCGGC 58.993 47.619 0.00 0.00 0.00 5.54
264 265 3.191371 GGTCAAATTCTTCATCGGCTTGT 59.809 43.478 0.00 0.00 0.00 3.16
323 327 4.329545 GACTGCCCCACGAGCCAA 62.330 66.667 0.00 0.00 0.00 4.52
327 331 3.056328 GCCCCACGAGCCAACTTC 61.056 66.667 0.00 0.00 0.00 3.01
332 336 1.291877 CCACGAGCCAACTTCCTTCG 61.292 60.000 0.00 0.00 0.00 3.79
341 345 0.321996 AACTTCCTTCGTCTGCTCCC 59.678 55.000 0.00 0.00 0.00 4.30
357 361 4.821589 CCGGAAGCCTGAGACGCC 62.822 72.222 0.00 0.00 0.00 5.68
362 366 2.010582 GAAGCCTGAGACGCCGATCT 62.011 60.000 0.00 0.00 0.00 2.75
379 383 3.637229 CGATCTACATCCTGGTAGGTTGT 59.363 47.826 14.11 14.11 46.77 3.32
389 393 1.000506 TGGTAGGTTGTGTCTTCGCTC 59.999 52.381 0.00 0.00 0.00 5.03
398 402 2.223641 TGTGTCTTCGCTCGTGTTACTT 60.224 45.455 0.00 0.00 0.00 2.24
407 411 3.723835 CGCTCGTGTTACTTGGCATTAAC 60.724 47.826 10.95 10.95 0.00 2.01
426 430 7.410942 GCATTAACTTCTCTCTTAGTGTTGTCG 60.411 40.741 0.00 0.00 0.00 4.35
614 629 1.183549 GCCCTCTTCCTCGACACTTA 58.816 55.000 0.00 0.00 0.00 2.24
621 636 0.666913 TCCTCGACACTTATAGGCGC 59.333 55.000 0.00 0.00 0.00 6.53
627 642 2.739292 GACACTTATAGGCGCGATCAA 58.261 47.619 12.10 0.00 0.00 2.57
642 657 2.481104 CGATCAAGGAAGAGGCTCACTC 60.481 54.545 18.26 12.34 46.98 3.51
655 670 0.250640 CTCACTCTTGGGTTGCTGCT 60.251 55.000 0.00 0.00 0.00 4.24
660 675 1.228367 CTTGGGTTGCTGCTGGAGT 60.228 57.895 0.00 0.00 0.00 3.85
671 686 2.551071 GCTGCTGGAGTTAAAGGACTGT 60.551 50.000 0.00 0.00 0.00 3.55
675 690 6.614694 TGCTGGAGTTAAAGGACTGTATTA 57.385 37.500 0.00 0.00 0.00 0.98
701 720 8.387813 AGTTAATCCCTGTAACTTGAATTACCA 58.612 33.333 0.00 0.00 38.37 3.25
702 721 9.185680 GTTAATCCCTGTAACTTGAATTACCAT 57.814 33.333 0.00 0.00 34.67 3.55
709 728 7.040062 CCTGTAACTTGAATTACCATTGTTGGA 60.040 37.037 0.00 0.00 46.92 3.53
710 729 8.239038 TGTAACTTGAATTACCATTGTTGGAA 57.761 30.769 0.00 0.00 46.92 3.53
728 747 2.519013 GAACTGAGCATCCCCTTTGTT 58.481 47.619 0.00 0.00 0.00 2.83
742 761 2.159170 CCTTTGTTTTCCGCTCCACAAA 60.159 45.455 0.00 0.00 36.91 2.83
743 762 2.861462 TTGTTTTCCGCTCCACAAAG 57.139 45.000 0.00 0.00 0.00 2.77
747 766 0.472471 TTTCCGCTCCACAAAGGTCT 59.528 50.000 0.00 0.00 39.02 3.85
755 774 1.227823 CACAAAGGTCTCGGCCACA 60.228 57.895 2.24 0.00 0.00 4.17
759 778 0.400213 AAAGGTCTCGGCCACATCAA 59.600 50.000 2.24 0.00 0.00 2.57
780 806 0.241749 TTGTGTACGTGGCTAGGACG 59.758 55.000 0.00 0.00 42.62 4.79
799 825 3.869832 GACGCTACCCTGTAATTTCTTCC 59.130 47.826 0.00 0.00 0.00 3.46
802 828 4.625564 CGCTACCCTGTAATTTCTTCCCTT 60.626 45.833 0.00 0.00 0.00 3.95
806 832 7.560262 GCTACCCTGTAATTTCTTCCCTTTATT 59.440 37.037 0.00 0.00 0.00 1.40
823 849 7.230510 TCCCTTTATTAATGCAATGATACGCTT 59.769 33.333 0.00 0.00 0.00 4.68
825 851 9.891828 CCTTTATTAATGCAATGATACGCTTTA 57.108 29.630 0.00 0.00 0.00 1.85
836 862 6.764877 ATGATACGCTTTAAGGTGTATTCG 57.235 37.500 20.69 2.55 41.24 3.34
838 864 6.794374 TGATACGCTTTAAGGTGTATTCGTA 58.206 36.000 20.69 9.47 41.24 3.43
868 898 8.502161 AAGTTTTAAATGAGATGTTTACGCAC 57.498 30.769 0.00 0.00 0.00 5.34
940 985 3.001939 GGCCTAACCGAATTATTGACGTG 59.998 47.826 0.00 0.00 0.00 4.49
941 986 3.619929 GCCTAACCGAATTATTGACGTGT 59.380 43.478 0.00 0.00 0.00 4.49
942 987 4.260091 GCCTAACCGAATTATTGACGTGTC 60.260 45.833 0.00 0.00 0.00 3.67
943 988 4.865925 CCTAACCGAATTATTGACGTGTCA 59.134 41.667 0.00 0.00 37.91 3.58
952 997 1.552226 TTGACGTGTCAACTGTCGAC 58.448 50.000 9.11 9.11 43.90 4.20
953 998 0.248743 TGACGTGTCAACTGTCGACC 60.249 55.000 14.12 0.00 36.53 4.79
954 999 0.248743 GACGTGTCAACTGTCGACCA 60.249 55.000 14.12 0.00 32.15 4.02
955 1000 0.387929 ACGTGTCAACTGTCGACCAT 59.612 50.000 14.12 0.00 32.15 3.55
956 1001 1.610038 ACGTGTCAACTGTCGACCATA 59.390 47.619 14.12 0.00 32.15 2.74
957 1002 2.230508 ACGTGTCAACTGTCGACCATAT 59.769 45.455 14.12 0.00 32.15 1.78
958 1003 2.852413 CGTGTCAACTGTCGACCATATC 59.148 50.000 14.12 0.16 32.15 1.63
959 1004 3.187700 GTGTCAACTGTCGACCATATCC 58.812 50.000 14.12 0.00 32.15 2.59
960 1005 3.096852 TGTCAACTGTCGACCATATCCT 58.903 45.455 14.12 0.00 32.15 3.24
961 1006 3.513912 TGTCAACTGTCGACCATATCCTT 59.486 43.478 14.12 0.00 32.15 3.36
962 1007 3.865745 GTCAACTGTCGACCATATCCTTG 59.134 47.826 14.12 4.18 0.00 3.61
963 1008 3.118775 TCAACTGTCGACCATATCCTTGG 60.119 47.826 14.12 0.00 42.82 3.61
964 1009 1.139058 ACTGTCGACCATATCCTTGGC 59.861 52.381 14.12 0.00 40.68 4.52
970 1015 2.224621 CGACCATATCCTTGGCATCCTT 60.225 50.000 0.00 0.00 40.68 3.36
992 1041 3.005472 TCTGTTATCCATAGCGTAGGCAC 59.995 47.826 10.48 0.00 43.41 5.01
1008 1057 1.748122 CACAGCAGCCATGGAGGAC 60.748 63.158 18.40 0.57 41.22 3.85
1009 1058 2.513204 CAGCAGCCATGGAGGACG 60.513 66.667 18.40 0.00 41.22 4.79
1134 1190 4.379243 CACGGCCTCACCTTCGCT 62.379 66.667 0.00 0.00 35.61 4.93
1215 1293 4.082125 TCAGCAATCTGACTGACTGACTA 58.918 43.478 8.44 0.00 43.95 2.59
1666 4630 0.319555 TAGCCGTGTTCAGCAGACAC 60.320 55.000 7.07 7.07 0.00 3.67
1727 4725 7.931407 TGAACATCCGAGTGTAATTATGCTTAT 59.069 33.333 0.00 0.00 0.00 1.73
1749 4747 3.185455 AGGGTGGTTTGCTAGAGATCTT 58.815 45.455 0.00 0.00 0.00 2.40
1760 4758 3.316868 GCTAGAGATCTTCCTACGCTGTT 59.683 47.826 0.00 0.00 0.00 3.16
1785 4783 4.760047 ACCGACGTGATGCTGCCC 62.760 66.667 0.00 0.00 0.00 5.36
1929 4984 1.678101 GCTTCAGCGGCCAAGATATTT 59.322 47.619 2.24 0.00 0.00 1.40
1944 5033 8.553459 CCAAGATATTTGGCAGTAAGTATAGG 57.447 38.462 4.43 0.00 32.18 2.57
1945 5034 8.375506 CCAAGATATTTGGCAGTAAGTATAGGA 58.624 37.037 4.43 0.00 32.18 2.94
1946 5035 9.429359 CAAGATATTTGGCAGTAAGTATAGGAG 57.571 37.037 0.00 0.00 0.00 3.69
1947 5036 8.958060 AGATATTTGGCAGTAAGTATAGGAGA 57.042 34.615 0.00 0.00 0.00 3.71
1948 5037 9.030452 AGATATTTGGCAGTAAGTATAGGAGAG 57.970 37.037 0.00 0.00 0.00 3.20
1949 5038 8.728596 ATATTTGGCAGTAAGTATAGGAGAGT 57.271 34.615 0.00 0.00 0.00 3.24
1950 5039 5.854010 TTGGCAGTAAGTATAGGAGAGTG 57.146 43.478 0.00 0.00 0.00 3.51
1951 5040 4.215908 TGGCAGTAAGTATAGGAGAGTGG 58.784 47.826 0.00 0.00 0.00 4.00
1952 5041 4.079385 TGGCAGTAAGTATAGGAGAGTGGA 60.079 45.833 0.00 0.00 0.00 4.02
1953 5042 4.521256 GGCAGTAAGTATAGGAGAGTGGAG 59.479 50.000 0.00 0.00 0.00 3.86
1959 5048 2.380064 ATAGGAGAGTGGAGCAGAGG 57.620 55.000 0.00 0.00 0.00 3.69
1963 5052 1.001503 AGAGTGGAGCAGAGGAGGG 59.998 63.158 0.00 0.00 0.00 4.30
1987 5076 6.483640 GGTAATGCAGAGTATAGGTTTTCTGG 59.516 42.308 0.00 0.00 37.97 3.86
1993 5082 6.092807 GCAGAGTATAGGTTTTCTGGAACTTG 59.907 42.308 2.93 0.00 37.97 3.16
2007 5108 0.964358 AACTTGATGCAGGGCAGAGC 60.964 55.000 0.00 0.00 43.65 4.09
2285 5446 6.094742 ACACGTGATATCATAAAATTGTGCCA 59.905 34.615 25.01 0.00 0.00 4.92
2295 5456 7.264221 TCATAAAATTGTGCCATTACCATGAC 58.736 34.615 0.00 0.00 31.07 3.06
2372 5757 8.012809 CACTATAAATTGTACTTTTGCACACGA 58.987 33.333 0.00 0.00 0.00 4.35
2380 5765 4.410492 ACTTTTGCACACGAATGAGATC 57.590 40.909 0.00 0.00 0.00 2.75
2492 7092 4.864334 CGGGTGCAGGAGGCCATC 62.864 72.222 5.01 0.00 43.89 3.51
2567 7167 2.744202 CAAATCTGCGTTAGCCACTCTT 59.256 45.455 0.00 0.00 44.33 2.85
2570 7170 2.443416 TCTGCGTTAGCCACTCTTCTA 58.557 47.619 0.00 0.00 44.33 2.10
2601 7225 6.814954 ACTCATACACTGTTCATAATCCCT 57.185 37.500 0.00 0.00 0.00 4.20
2602 7226 7.914427 ACTCATACACTGTTCATAATCCCTA 57.086 36.000 0.00 0.00 0.00 3.53
2604 7228 9.601810 ACTCATACACTGTTCATAATCCCTATA 57.398 33.333 0.00 0.00 0.00 1.31
2624 7306 8.475639 CCCTATATATATACACTTTTGCTCCGT 58.524 37.037 0.00 0.00 0.00 4.69
2641 7323 6.625362 TGCTCCGTTTTAATGAATTTGCATA 58.375 32.000 0.00 0.00 0.00 3.14
2702 7384 2.203209 CCCCACCGAAGCTATGCC 60.203 66.667 0.00 0.00 0.00 4.40
2863 7545 1.290955 CGGCGGTGACTGTTTCCTA 59.709 57.895 0.00 0.00 0.00 2.94
2962 7644 7.361127 CCAATTCTGTCATATCTTGCTGAATC 58.639 38.462 0.00 0.00 33.40 2.52
2966 7648 4.625028 TGTCATATCTTGCTGAATCCTCG 58.375 43.478 0.00 0.00 0.00 4.63
2973 7655 3.509967 TCTTGCTGAATCCTCGAGTACAA 59.490 43.478 12.31 4.13 0.00 2.41
2974 7656 4.160439 TCTTGCTGAATCCTCGAGTACAAT 59.840 41.667 12.31 0.00 0.00 2.71
3003 7691 6.809869 TGTGTGACTCTATCTGAACATATGG 58.190 40.000 7.80 0.00 0.00 2.74
3032 7736 3.192466 ACCGTGAAGTTTGTGTAGTGAC 58.808 45.455 0.00 0.00 0.00 3.67
3143 7856 6.129326 CGATTACATCTCTAAGCGATTGACAC 60.129 42.308 0.00 0.00 37.64 3.67
3152 7865 0.716108 GCGATTGACACAGGAGAACG 59.284 55.000 0.00 0.00 0.00 3.95
3179 7892 4.473444 GGATCTTCCATAATTGCCCAGAA 58.527 43.478 0.00 0.00 36.28 3.02
3182 7895 5.128033 TCTTCCATAATTGCCCAGAATCA 57.872 39.130 0.00 0.00 0.00 2.57
3183 7896 5.708544 TCTTCCATAATTGCCCAGAATCAT 58.291 37.500 0.00 0.00 0.00 2.45
3184 7897 6.851318 TCTTCCATAATTGCCCAGAATCATA 58.149 36.000 0.00 0.00 0.00 2.15
3185 7898 6.944290 TCTTCCATAATTGCCCAGAATCATAG 59.056 38.462 0.00 0.00 0.00 2.23
3186 7899 6.204852 TCCATAATTGCCCAGAATCATAGT 57.795 37.500 0.00 0.00 0.00 2.12
3187 7900 6.613699 TCCATAATTGCCCAGAATCATAGTT 58.386 36.000 0.00 0.00 0.00 2.24
3188 7901 7.068702 TCCATAATTGCCCAGAATCATAGTTT 58.931 34.615 0.00 0.00 0.00 2.66
3190 7903 8.859090 CCATAATTGCCCAGAATCATAGTTTTA 58.141 33.333 0.00 0.00 0.00 1.52
3194 7907 7.531857 TTGCCCAGAATCATAGTTTTAAACA 57.468 32.000 10.60 0.00 0.00 2.83
3195 7908 7.156876 TGCCCAGAATCATAGTTTTAAACAG 57.843 36.000 10.60 0.16 0.00 3.16
3196 7909 6.036470 GCCCAGAATCATAGTTTTAAACAGC 58.964 40.000 10.60 0.00 0.00 4.40
3197 7910 6.127619 GCCCAGAATCATAGTTTTAAACAGCT 60.128 38.462 10.60 0.00 0.00 4.24
3198 7911 7.067008 GCCCAGAATCATAGTTTTAAACAGCTA 59.933 37.037 10.60 0.00 0.00 3.32
3199 7912 9.125026 CCCAGAATCATAGTTTTAAACAGCTAT 57.875 33.333 10.60 0.00 0.00 2.97
3205 7918 8.856153 TCATAGTTTTAAACAGCTATTCCACA 57.144 30.769 10.60 0.00 0.00 4.17
3206 7919 9.461312 TCATAGTTTTAAACAGCTATTCCACAT 57.539 29.630 10.60 0.00 0.00 3.21
3213 7926 8.800370 TTAAACAGCTATTCCACATAATGACA 57.200 30.769 0.00 0.00 0.00 3.58
3214 7927 6.683974 AACAGCTATTCCACATAATGACAC 57.316 37.500 0.00 0.00 0.00 3.67
3215 7928 5.126067 ACAGCTATTCCACATAATGACACC 58.874 41.667 0.00 0.00 0.00 4.16
3216 7929 5.104360 ACAGCTATTCCACATAATGACACCT 60.104 40.000 0.00 0.00 0.00 4.00
3217 7930 5.237996 CAGCTATTCCACATAATGACACCTG 59.762 44.000 0.00 0.00 0.00 4.00
3218 7931 4.023707 GCTATTCCACATAATGACACCTGC 60.024 45.833 0.00 0.00 0.00 4.85
3219 7932 3.719268 TTCCACATAATGACACCTGCT 57.281 42.857 0.00 0.00 0.00 4.24
3220 7933 3.266510 TCCACATAATGACACCTGCTC 57.733 47.619 0.00 0.00 0.00 4.26
3221 7934 2.571202 TCCACATAATGACACCTGCTCA 59.429 45.455 0.00 0.00 0.00 4.26
3222 7935 3.008923 TCCACATAATGACACCTGCTCAA 59.991 43.478 0.00 0.00 0.00 3.02
3223 7936 3.758023 CCACATAATGACACCTGCTCAAA 59.242 43.478 0.00 0.00 0.00 2.69
3224 7937 4.218200 CCACATAATGACACCTGCTCAAAA 59.782 41.667 0.00 0.00 0.00 2.44
3225 7938 5.156355 CACATAATGACACCTGCTCAAAAC 58.844 41.667 0.00 0.00 0.00 2.43
3226 7939 4.218417 ACATAATGACACCTGCTCAAAACC 59.782 41.667 0.00 0.00 0.00 3.27
3227 7940 2.664402 ATGACACCTGCTCAAAACCT 57.336 45.000 0.00 0.00 0.00 3.50
3228 7941 3.788227 ATGACACCTGCTCAAAACCTA 57.212 42.857 0.00 0.00 0.00 3.08
3229 7942 3.788227 TGACACCTGCTCAAAACCTAT 57.212 42.857 0.00 0.00 0.00 2.57
3230 7943 4.901197 TGACACCTGCTCAAAACCTATA 57.099 40.909 0.00 0.00 0.00 1.31
3231 7944 4.832248 TGACACCTGCTCAAAACCTATAG 58.168 43.478 0.00 0.00 0.00 1.31
3232 7945 3.610911 ACACCTGCTCAAAACCTATAGC 58.389 45.455 0.00 0.00 35.51 2.97
3233 7946 3.264450 ACACCTGCTCAAAACCTATAGCT 59.736 43.478 0.00 0.00 35.95 3.32
3234 7947 4.469945 ACACCTGCTCAAAACCTATAGCTA 59.530 41.667 0.00 0.00 35.95 3.32
3235 7948 5.053145 CACCTGCTCAAAACCTATAGCTAG 58.947 45.833 0.00 0.00 35.95 3.42
3264 7977 6.690194 AGCCTTGCTATAACTGATTTGAAG 57.310 37.500 0.00 0.00 36.99 3.02
3265 7978 5.591877 AGCCTTGCTATAACTGATTTGAAGG 59.408 40.000 0.00 0.00 36.99 3.46
3266 7979 5.221126 GCCTTGCTATAACTGATTTGAAGGG 60.221 44.000 0.00 0.00 0.00 3.95
3267 7980 5.221126 CCTTGCTATAACTGATTTGAAGGGC 60.221 44.000 0.00 0.00 0.00 5.19
3268 7981 4.207165 TGCTATAACTGATTTGAAGGGCC 58.793 43.478 0.00 0.00 0.00 5.80
3269 7982 3.251004 GCTATAACTGATTTGAAGGGCCG 59.749 47.826 0.00 0.00 0.00 6.13
3270 7983 1.459450 TAACTGATTTGAAGGGCCGC 58.541 50.000 0.00 0.00 0.00 6.53
3271 7984 1.250840 AACTGATTTGAAGGGCCGCC 61.251 55.000 0.00 0.00 0.00 6.13
3272 7985 2.749839 TGATTTGAAGGGCCGCCG 60.750 61.111 2.55 0.00 0.00 6.46
3273 7986 4.193334 GATTTGAAGGGCCGCCGC 62.193 66.667 2.55 0.00 0.00 6.53
3274 7987 4.740822 ATTTGAAGGGCCGCCGCT 62.741 61.111 2.55 0.00 35.50 5.52
3275 7988 3.338275 ATTTGAAGGGCCGCCGCTA 62.338 57.895 2.55 0.00 33.36 4.26
3276 7989 2.624674 ATTTGAAGGGCCGCCGCTAT 62.625 55.000 2.55 0.00 33.36 2.97
3277 7990 2.830186 TTTGAAGGGCCGCCGCTATT 62.830 55.000 2.55 0.00 33.36 1.73
3278 7991 2.516225 GAAGGGCCGCCGCTATTT 60.516 61.111 2.55 0.00 33.36 1.40
3279 7992 2.828549 AAGGGCCGCCGCTATTTG 60.829 61.111 2.55 0.00 33.36 2.32
3283 7996 3.595758 GCCGCCGCTATTTGCCAT 61.596 61.111 0.00 0.00 38.78 4.40
3284 7997 2.258013 GCCGCCGCTATTTGCCATA 61.258 57.895 0.00 0.00 38.78 2.74
3285 7998 1.868997 CCGCCGCTATTTGCCATAG 59.131 57.895 0.00 0.00 38.78 2.23
3286 7999 1.207593 CGCCGCTATTTGCCATAGC 59.792 57.895 12.89 12.89 42.53 2.97
3287 8000 1.581447 GCCGCTATTTGCCATAGCC 59.419 57.895 15.85 3.53 42.89 3.93
3288 8001 1.172180 GCCGCTATTTGCCATAGCCA 61.172 55.000 15.85 0.00 42.89 4.75
3289 8002 0.877071 CCGCTATTTGCCATAGCCAG 59.123 55.000 15.85 7.14 42.89 4.85
3290 8003 0.239347 CGCTATTTGCCATAGCCAGC 59.761 55.000 15.85 0.43 42.89 4.85
3291 8004 1.613836 GCTATTTGCCATAGCCAGCT 58.386 50.000 12.15 0.00 40.69 4.24
3292 8005 1.268899 GCTATTTGCCATAGCCAGCTG 59.731 52.381 6.78 6.78 40.69 4.24
3293 8006 2.579873 CTATTTGCCATAGCCAGCTGT 58.420 47.619 13.81 0.00 38.69 4.40
3294 8007 1.856629 ATTTGCCATAGCCAGCTGTT 58.143 45.000 13.81 2.90 38.69 3.16
3295 8008 1.631405 TTTGCCATAGCCAGCTGTTT 58.369 45.000 13.81 2.50 38.69 2.83
3296 8009 2.505650 TTGCCATAGCCAGCTGTTTA 57.494 45.000 13.81 4.91 38.69 2.01
3297 8010 2.505650 TGCCATAGCCAGCTGTTTAA 57.494 45.000 13.81 0.00 38.69 1.52
3298 8011 2.801483 TGCCATAGCCAGCTGTTTAAA 58.199 42.857 13.81 0.00 38.69 1.52
3299 8012 3.161067 TGCCATAGCCAGCTGTTTAAAA 58.839 40.909 13.81 0.00 38.69 1.52
3300 8013 3.056891 TGCCATAGCCAGCTGTTTAAAAC 60.057 43.478 13.81 0.00 38.69 2.43
3301 8014 3.056891 GCCATAGCCAGCTGTTTAAAACA 60.057 43.478 13.81 0.00 39.52 2.83
3302 8015 4.485163 CCATAGCCAGCTGTTTAAAACAC 58.515 43.478 13.81 0.00 36.25 3.32
3303 8016 4.218417 CCATAGCCAGCTGTTTAAAACACT 59.782 41.667 13.81 0.00 36.25 3.55
3304 8017 3.715628 AGCCAGCTGTTTAAAACACTG 57.284 42.857 13.81 0.00 38.79 3.66
3305 8018 3.023832 AGCCAGCTGTTTAAAACACTGT 58.976 40.909 13.81 0.00 38.10 3.55
3306 8019 3.066760 AGCCAGCTGTTTAAAACACTGTC 59.933 43.478 13.81 0.00 38.10 3.51
3307 8020 3.795488 GCCAGCTGTTTAAAACACTGTCC 60.795 47.826 13.81 0.00 38.10 4.02
3308 8021 3.380004 CCAGCTGTTTAAAACACTGTCCA 59.620 43.478 13.81 0.00 38.10 4.02
3309 8022 4.498009 CCAGCTGTTTAAAACACTGTCCAG 60.498 45.833 13.81 0.00 38.10 3.86
3310 8023 4.335315 CAGCTGTTTAAAACACTGTCCAGA 59.665 41.667 5.25 0.00 36.58 3.86
3311 8024 4.947388 AGCTGTTTAAAACACTGTCCAGAA 59.053 37.500 0.40 0.00 36.25 3.02
3312 8025 5.594317 AGCTGTTTAAAACACTGTCCAGAAT 59.406 36.000 0.40 0.00 36.25 2.40
3313 8026 5.915196 GCTGTTTAAAACACTGTCCAGAATC 59.085 40.000 0.40 0.00 36.25 2.52
3314 8027 6.055231 TGTTTAAAACACTGTCCAGAATCG 57.945 37.500 0.40 0.00 36.25 3.34
3315 8028 5.818336 TGTTTAAAACACTGTCCAGAATCGA 59.182 36.000 0.40 0.00 36.25 3.59
3316 8029 6.485313 TGTTTAAAACACTGTCCAGAATCGAT 59.515 34.615 0.40 0.00 36.25 3.59
3317 8030 7.658167 TGTTTAAAACACTGTCCAGAATCGATA 59.342 33.333 0.00 0.00 36.25 2.92
3318 8031 8.500773 GTTTAAAACACTGTCCAGAATCGATAA 58.499 33.333 0.00 0.00 0.00 1.75
3319 8032 8.610248 TTAAAACACTGTCCAGAATCGATAAA 57.390 30.769 0.00 0.00 0.00 1.40
3320 8033 6.727824 AAACACTGTCCAGAATCGATAAAG 57.272 37.500 0.00 0.00 0.00 1.85
3321 8034 4.184629 ACACTGTCCAGAATCGATAAAGC 58.815 43.478 0.00 0.00 0.00 3.51
3332 8045 5.540337 AGAATCGATAAAGCACCCATCTCTA 59.460 40.000 0.00 0.00 0.00 2.43
3333 8046 5.808366 ATCGATAAAGCACCCATCTCTAA 57.192 39.130 0.00 0.00 0.00 2.10
3339 8052 1.146358 GCACCCATCTCTAACGCGTC 61.146 60.000 14.44 0.00 0.00 5.19
3352 8065 1.080501 CGCGTCGCCATATCCTGAT 60.081 57.895 12.44 0.00 0.00 2.90
3371 8090 0.106469 TCATCCTCCTCGTCCTCCTG 60.106 60.000 0.00 0.00 0.00 3.86
3379 8098 0.457851 CTCGTCCTCCTGGTCATCAC 59.542 60.000 0.00 0.00 34.23 3.06
3410 8129 2.319844 AGCCTCATCGTCACCATCATA 58.680 47.619 0.00 0.00 0.00 2.15
3447 8166 2.896039 AGCCTGACCAAGTAGTTCTCT 58.104 47.619 0.00 0.00 0.00 3.10
3454 8173 3.243724 ACCAAGTAGTTCTCTTCCAGCT 58.756 45.455 0.00 0.00 0.00 4.24
3455 8174 3.007398 ACCAAGTAGTTCTCTTCCAGCTG 59.993 47.826 6.78 6.78 0.00 4.24
3467 8186 2.887568 CAGCTGCCTCGGCGTTAG 60.888 66.667 6.85 0.00 45.51 2.34
3481 8200 3.861569 GCGTTAGCACAAGGATATGTC 57.138 47.619 0.00 0.00 44.35 3.06
3486 8205 3.988976 AGCACAAGGATATGTCTGTGT 57.011 42.857 11.68 3.99 0.00 3.72
3493 8212 2.501723 AGGATATGTCTGTGTGTGGTCC 59.498 50.000 0.00 0.00 0.00 4.46
3505 8224 1.239296 TGTGGTCCTCGTCGTCGAAT 61.239 55.000 6.19 0.00 45.61 3.34
3508 8227 1.811965 TGGTCCTCGTCGTCGAATAAA 59.188 47.619 6.19 0.00 45.61 1.40
3546 8265 0.460284 ACGATGTCGGCTTGGTGATC 60.460 55.000 7.38 0.00 44.95 2.92
3548 8267 1.067060 CGATGTCGGCTTGGTGATCTA 59.933 52.381 0.00 0.00 35.37 1.98
3549 8268 2.288457 CGATGTCGGCTTGGTGATCTAT 60.288 50.000 0.00 0.00 35.37 1.98
3554 8273 1.414181 CGGCTTGGTGATCTATGAGGT 59.586 52.381 0.00 0.00 0.00 3.85
3562 8281 0.759346 GATCTATGAGGTGGGGCGTT 59.241 55.000 0.00 0.00 0.00 4.84
3565 8284 0.469917 CTATGAGGTGGGGCGTTGAT 59.530 55.000 0.00 0.00 0.00 2.57
3566 8285 0.180171 TATGAGGTGGGGCGTTGATG 59.820 55.000 0.00 0.00 0.00 3.07
3571 8290 1.586154 GGTGGGGCGTTGATGACTTG 61.586 60.000 0.00 0.00 0.00 3.16
3587 8306 3.562779 TTGCCCGGTTCGAGACGAC 62.563 63.158 11.69 5.05 34.89 4.34
3588 8307 4.790861 GCCCGGTTCGAGACGACC 62.791 72.222 11.69 3.29 34.89 4.79
3627 8352 2.511600 GACCGTCGCTTCCATGGG 60.512 66.667 13.02 0.00 0.00 4.00
3690 8415 2.462503 TTTTTCCTTCCGCCGATCG 58.537 52.632 8.51 8.51 38.08 3.69
3699 8424 2.708865 CGCCGATCGGTGTACGTA 59.291 61.111 34.27 0.00 44.69 3.57
3700 8425 1.652329 CGCCGATCGGTGTACGTAC 60.652 63.158 34.27 18.90 44.69 3.67
3701 8426 1.652329 GCCGATCGGTGTACGTACG 60.652 63.158 33.33 15.01 44.69 3.67
3702 8427 4.576843 CGATCGGTGTACGTACGG 57.423 61.111 21.06 12.18 44.69 4.02
3703 8428 1.652329 CGATCGGTGTACGTACGGC 60.652 63.158 21.06 14.91 44.69 5.68
3704 8429 1.723870 GATCGGTGTACGTACGGCT 59.276 57.895 21.06 1.34 44.69 5.52
3705 8430 0.590732 GATCGGTGTACGTACGGCTG 60.591 60.000 21.06 18.71 44.69 4.85
3720 8445 1.394618 GGCTGAGTAGATGTCGGAGT 58.605 55.000 0.00 0.00 0.00 3.85
3732 8457 0.521735 GTCGGAGTTGTTGATTGGGC 59.478 55.000 0.00 0.00 0.00 5.36
3735 8460 0.244721 GGAGTTGTTGATTGGGCTGC 59.755 55.000 0.00 0.00 0.00 5.25
3739 8464 0.680618 TTGTTGATTGGGCTGCCTTG 59.319 50.000 19.68 0.00 0.00 3.61
3740 8465 1.186917 TGTTGATTGGGCTGCCTTGG 61.187 55.000 19.68 0.00 0.00 3.61
3741 8466 2.285024 TTGATTGGGCTGCCTTGGC 61.285 57.895 19.68 4.43 0.00 4.52
3742 8467 2.363406 GATTGGGCTGCCTTGGCT 60.363 61.111 19.68 0.00 0.00 4.75
3743 8468 1.986210 GATTGGGCTGCCTTGGCTT 60.986 57.895 19.68 0.00 0.00 4.35
3744 8469 2.234913 GATTGGGCTGCCTTGGCTTG 62.235 60.000 19.68 6.98 0.00 4.01
3761 8486 3.763931 TGGCTTGCCCAACACTTAT 57.236 47.368 9.35 0.00 41.82 1.73
3762 8487 2.889170 TGGCTTGCCCAACACTTATA 57.111 45.000 9.35 0.00 41.82 0.98
3763 8488 2.722094 TGGCTTGCCCAACACTTATAG 58.278 47.619 9.35 0.00 41.82 1.31
3764 8489 2.307392 TGGCTTGCCCAACACTTATAGA 59.693 45.455 9.35 0.00 41.82 1.98
3765 8490 3.245087 TGGCTTGCCCAACACTTATAGAA 60.245 43.478 9.35 0.00 41.82 2.10
3766 8491 3.378427 GGCTTGCCCAACACTTATAGAAG 59.622 47.826 0.00 0.00 38.76 2.85
3767 8492 3.378427 GCTTGCCCAACACTTATAGAAGG 59.622 47.826 1.59 0.00 36.95 3.46
3768 8493 2.999331 TGCCCAACACTTATAGAAGGC 58.001 47.619 1.59 0.00 36.95 4.35
3769 8494 1.940613 GCCCAACACTTATAGAAGGCG 59.059 52.381 1.59 0.00 36.95 5.52
3770 8495 2.679930 GCCCAACACTTATAGAAGGCGT 60.680 50.000 1.59 0.00 36.95 5.68
3771 8496 2.936498 CCCAACACTTATAGAAGGCGTG 59.064 50.000 1.59 0.00 36.95 5.34
3772 8497 2.351726 CCAACACTTATAGAAGGCGTGC 59.648 50.000 1.59 0.00 36.95 5.34
3773 8498 3.000041 CAACACTTATAGAAGGCGTGCA 59.000 45.455 1.59 0.00 36.95 4.57
3774 8499 3.543680 ACACTTATAGAAGGCGTGCAT 57.456 42.857 1.59 0.00 36.95 3.96
3775 8500 3.198068 ACACTTATAGAAGGCGTGCATG 58.802 45.455 0.09 0.09 36.95 4.06
3776 8501 2.032549 CACTTATAGAAGGCGTGCATGC 60.033 50.000 22.99 22.99 36.95 4.06
3777 8502 2.212652 CTTATAGAAGGCGTGCATGCA 58.787 47.619 30.79 18.46 36.28 3.96
3778 8503 2.549064 TATAGAAGGCGTGCATGCAT 57.451 45.000 30.79 23.10 36.28 3.96
3779 8504 0.949397 ATAGAAGGCGTGCATGCATG 59.051 50.000 31.36 31.36 36.28 4.06
3791 8516 3.719816 ATGCATGCATGGATCGAGT 57.280 47.368 31.74 6.65 33.26 4.18
3792 8517 1.520494 ATGCATGCATGGATCGAGTC 58.480 50.000 31.74 8.62 33.26 3.36
3793 8518 0.877213 TGCATGCATGGATCGAGTCG 60.877 55.000 27.34 6.09 0.00 4.18
3794 8519 1.563435 GCATGCATGGATCGAGTCGG 61.563 60.000 27.34 0.00 0.00 4.79
3795 8520 0.032540 CATGCATGGATCGAGTCGGA 59.967 55.000 19.40 0.00 0.00 4.55
3796 8521 0.316522 ATGCATGGATCGAGTCGGAG 59.683 55.000 13.54 0.00 0.00 4.63
3797 8522 1.037579 TGCATGGATCGAGTCGGAGT 61.038 55.000 13.54 0.00 0.00 3.85
3798 8523 0.596083 GCATGGATCGAGTCGGAGTG 60.596 60.000 13.54 6.36 0.00 3.51
3799 8524 0.596083 CATGGATCGAGTCGGAGTGC 60.596 60.000 13.54 5.45 0.00 4.40
3800 8525 1.037579 ATGGATCGAGTCGGAGTGCA 61.038 55.000 13.54 10.96 0.00 4.57
3801 8526 1.248101 TGGATCGAGTCGGAGTGCAA 61.248 55.000 13.54 0.00 0.00 4.08
3802 8527 0.526524 GGATCGAGTCGGAGTGCAAG 60.527 60.000 13.54 0.00 0.00 4.01
3803 8528 0.171455 GATCGAGTCGGAGTGCAAGT 59.829 55.000 13.54 0.00 0.00 3.16
3804 8529 0.171455 ATCGAGTCGGAGTGCAAGTC 59.829 55.000 13.54 0.00 34.83 3.01
3805 8530 1.797933 CGAGTCGGAGTGCAAGTCG 60.798 63.158 4.10 0.00 37.07 4.18
3806 8531 1.444553 GAGTCGGAGTGCAAGTCGG 60.445 63.158 0.00 0.00 37.07 4.79
3807 8532 1.863662 GAGTCGGAGTGCAAGTCGGA 61.864 60.000 0.00 0.00 42.44 4.55
3808 8533 2.649034 TCGGAGTGCAAGTCGGAC 59.351 61.111 0.00 0.00 40.20 4.79
3809 8534 2.432628 CGGAGTGCAAGTCGGACC 60.433 66.667 4.14 0.00 38.75 4.46
3810 8535 2.432628 GGAGTGCAAGTCGGACCG 60.433 66.667 7.84 7.84 37.07 4.79
3811 8536 2.649034 GAGTGCAAGTCGGACCGA 59.351 61.111 13.88 13.88 36.40 4.69
3812 8537 1.006571 GAGTGCAAGTCGGACCGAA 60.007 57.895 20.26 0.00 37.72 4.30
3813 8538 1.282930 GAGTGCAAGTCGGACCGAAC 61.283 60.000 20.26 12.94 37.72 3.95
3814 8539 1.593209 GTGCAAGTCGGACCGAACA 60.593 57.895 20.26 11.88 37.72 3.18
3815 8540 1.593209 TGCAAGTCGGACCGAACAC 60.593 57.895 20.26 7.18 37.72 3.32
3816 8541 1.300697 GCAAGTCGGACCGAACACT 60.301 57.895 20.26 9.73 37.72 3.55
3817 8542 1.557443 GCAAGTCGGACCGAACACTG 61.557 60.000 20.26 13.89 37.72 3.66
3818 8543 0.944311 CAAGTCGGACCGAACACTGG 60.944 60.000 20.26 6.16 37.72 4.00
3819 8544 1.397390 AAGTCGGACCGAACACTGGT 61.397 55.000 20.26 0.00 44.10 4.00
3820 8545 1.068585 GTCGGACCGAACACTGGTT 59.931 57.895 20.26 0.00 40.63 3.67
3821 8546 1.068417 TCGGACCGAACACTGGTTG 59.932 57.895 15.79 0.00 40.63 3.77
3822 8547 2.604174 CGGACCGAACACTGGTTGC 61.604 63.158 8.64 0.00 40.63 4.17
3823 8548 1.525077 GGACCGAACACTGGTTGCA 60.525 57.895 0.00 0.00 40.63 4.08
3824 8549 1.098712 GGACCGAACACTGGTTGCAA 61.099 55.000 0.00 0.00 40.63 4.08
3825 8550 0.028902 GACCGAACACTGGTTGCAAC 59.971 55.000 21.59 21.59 40.63 4.17
3826 8551 1.010125 CCGAACACTGGTTGCAACG 60.010 57.895 22.67 12.75 37.36 4.10
3827 8552 1.010125 CGAACACTGGTTGCAACGG 60.010 57.895 22.67 19.04 37.36 4.44
3828 8553 1.433053 CGAACACTGGTTGCAACGGA 61.433 55.000 22.67 11.21 37.36 4.69
3829 8554 0.028902 GAACACTGGTTGCAACGGAC 59.971 55.000 22.67 10.20 37.36 4.79
3830 8555 0.678366 AACACTGGTTGCAACGGACA 60.678 50.000 22.67 14.18 35.46 4.02
3831 8556 0.465460 ACACTGGTTGCAACGGACAT 60.465 50.000 22.67 6.01 0.00 3.06
3832 8557 0.040157 CACTGGTTGCAACGGACATG 60.040 55.000 22.67 12.40 0.00 3.21
3833 8558 1.081242 CTGGTTGCAACGGACATGC 60.081 57.895 22.67 8.04 44.08 4.06
3834 8559 2.126888 GGTTGCAACGGACATGCG 60.127 61.111 22.67 0.00 46.76 4.73
3835 8560 2.637025 GTTGCAACGGACATGCGT 59.363 55.556 14.90 0.00 46.76 5.24
3836 8561 1.725625 GTTGCAACGGACATGCGTG 60.726 57.895 14.90 3.82 46.76 5.34
3837 8562 3.534970 TTGCAACGGACATGCGTGC 62.535 57.895 5.64 6.33 46.76 5.34
3838 8563 3.726517 GCAACGGACATGCGTGCT 61.727 61.111 5.64 0.00 33.57 4.40
3839 8564 2.476051 CAACGGACATGCGTGCTC 59.524 61.111 5.64 2.98 0.00 4.26
3840 8565 3.112075 AACGGACATGCGTGCTCG 61.112 61.111 16.59 16.59 40.37 5.03
3841 8566 3.858868 AACGGACATGCGTGCTCGT 62.859 57.895 17.68 17.68 38.37 4.18
3842 8567 3.842126 CGGACATGCGTGCTCGTG 61.842 66.667 5.64 3.72 39.49 4.35
3843 8568 4.152625 GGACATGCGTGCTCGTGC 62.153 66.667 5.64 1.71 39.49 5.34
3857 8582 3.755628 GTGCAGCCATGGCCACTG 61.756 66.667 33.14 24.80 43.17 3.66
3860 8585 2.283388 CAGCCATGGCCACTGGTT 60.283 61.111 33.14 20.58 43.17 3.67
3861 8586 2.283388 AGCCATGGCCACTGGTTG 60.283 61.111 33.14 14.32 43.17 3.77
3862 8587 4.073200 GCCATGGCCACTGGTTGC 62.073 66.667 27.24 12.97 36.10 4.17
3863 8588 2.601067 CCATGGCCACTGGTTGCA 60.601 61.111 8.16 0.00 0.00 4.08
3864 8589 2.208619 CCATGGCCACTGGTTGCAA 61.209 57.895 8.16 0.00 0.00 4.08
3865 8590 1.005867 CATGGCCACTGGTTGCAAC 60.006 57.895 21.59 21.59 0.00 4.17
3866 8591 1.457267 ATGGCCACTGGTTGCAACA 60.457 52.632 29.55 15.29 0.00 3.33
3867 8592 1.466025 ATGGCCACTGGTTGCAACAG 61.466 55.000 29.55 24.31 41.64 3.16
3868 8593 1.827789 GGCCACTGGTTGCAACAGA 60.828 57.895 29.55 15.15 39.24 3.41
3869 8594 1.360192 GCCACTGGTTGCAACAGAC 59.640 57.895 29.55 13.98 39.24 3.51
3870 8595 1.383456 GCCACTGGTTGCAACAGACA 61.383 55.000 29.55 17.65 39.24 3.41
3871 8596 0.381801 CCACTGGTTGCAACAGACAC 59.618 55.000 29.55 13.25 39.24 3.67
3872 8597 0.027979 CACTGGTTGCAACAGACACG 59.972 55.000 29.55 14.36 39.24 4.49
3873 8598 1.095228 ACTGGTTGCAACAGACACGG 61.095 55.000 29.55 18.66 39.24 4.94
3874 8599 1.785041 CTGGTTGCAACAGACACGGG 61.785 60.000 29.55 5.02 38.20 5.28
3875 8600 2.551912 GGTTGCAACAGACACGGGG 61.552 63.158 29.55 0.00 0.00 5.73
3876 8601 1.525077 GTTGCAACAGACACGGGGA 60.525 57.895 24.52 0.00 0.00 4.81
3877 8602 1.227823 TTGCAACAGACACGGGGAG 60.228 57.895 0.00 0.00 0.00 4.30
3878 8603 1.691195 TTGCAACAGACACGGGGAGA 61.691 55.000 0.00 0.00 0.00 3.71
3879 8604 1.296715 GCAACAGACACGGGGAGAT 59.703 57.895 0.00 0.00 0.00 2.75
3880 8605 1.021390 GCAACAGACACGGGGAGATG 61.021 60.000 0.00 0.00 0.00 2.90
3881 8606 0.391661 CAACAGACACGGGGAGATGG 60.392 60.000 0.00 0.00 0.00 3.51
3882 8607 1.553690 AACAGACACGGGGAGATGGG 61.554 60.000 0.00 0.00 0.00 4.00
3883 8608 1.685765 CAGACACGGGGAGATGGGA 60.686 63.158 0.00 0.00 0.00 4.37
3884 8609 1.080354 AGACACGGGGAGATGGGAA 59.920 57.895 0.00 0.00 0.00 3.97
3885 8610 0.978146 AGACACGGGGAGATGGGAAG 60.978 60.000 0.00 0.00 0.00 3.46
3886 8611 0.976073 GACACGGGGAGATGGGAAGA 60.976 60.000 0.00 0.00 0.00 2.87
3887 8612 0.978146 ACACGGGGAGATGGGAAGAG 60.978 60.000 0.00 0.00 0.00 2.85
3888 8613 1.383248 ACGGGGAGATGGGAAGAGG 60.383 63.158 0.00 0.00 0.00 3.69
3889 8614 2.812619 CGGGGAGATGGGAAGAGGC 61.813 68.421 0.00 0.00 0.00 4.70
3890 8615 2.812619 GGGGAGATGGGAAGAGGCG 61.813 68.421 0.00 0.00 0.00 5.52
3891 8616 2.812619 GGGAGATGGGAAGAGGCGG 61.813 68.421 0.00 0.00 0.00 6.13
3892 8617 2.110006 GAGATGGGAAGAGGCGGC 59.890 66.667 0.00 0.00 0.00 6.53
3893 8618 3.468326 GAGATGGGAAGAGGCGGCC 62.468 68.421 12.11 12.11 0.00 6.13
3894 8619 3.483869 GATGGGAAGAGGCGGCCT 61.484 66.667 24.13 24.13 36.03 5.19
3908 8633 3.869272 GCCTCATCGCCGTGCTTG 61.869 66.667 0.00 0.00 0.00 4.01
3909 8634 2.434884 CCTCATCGCCGTGCTTGT 60.435 61.111 0.00 0.00 0.00 3.16
3910 8635 2.456119 CCTCATCGCCGTGCTTGTC 61.456 63.158 0.00 0.00 0.00 3.18
3911 8636 2.792290 CTCATCGCCGTGCTTGTCG 61.792 63.158 0.00 0.00 0.00 4.35
3919 8644 3.112709 GTGCTTGTCGGCGGTCTC 61.113 66.667 7.21 0.00 34.52 3.36
3920 8645 4.717629 TGCTTGTCGGCGGTCTCG 62.718 66.667 7.21 0.00 39.81 4.04
3921 8646 4.719369 GCTTGTCGGCGGTCTCGT 62.719 66.667 7.21 0.00 38.89 4.18
3922 8647 2.504244 CTTGTCGGCGGTCTCGTC 60.504 66.667 7.21 0.00 38.89 4.20
3923 8648 3.966026 CTTGTCGGCGGTCTCGTCC 62.966 68.421 7.21 0.00 37.80 4.79
3930 8655 4.039357 CGGTCTCGTCCGTGTGCT 62.039 66.667 7.90 0.00 44.77 4.40
3931 8656 2.338984 GGTCTCGTCCGTGTGCTT 59.661 61.111 0.00 0.00 0.00 3.91
3932 8657 1.733399 GGTCTCGTCCGTGTGCTTC 60.733 63.158 0.00 0.00 0.00 3.86
3933 8658 1.733399 GTCTCGTCCGTGTGCTTCC 60.733 63.158 0.00 0.00 0.00 3.46
3934 8659 2.805353 CTCGTCCGTGTGCTTCCG 60.805 66.667 0.00 0.00 0.00 4.30
3935 8660 3.263503 CTCGTCCGTGTGCTTCCGA 62.264 63.158 0.00 0.00 0.00 4.55
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 2.125147 TCAAGAATCCAGGCGCGG 60.125 61.111 8.83 0.00 0.00 6.46
32 33 0.906775 GGTCGACCCAAGTAATCCCA 59.093 55.000 24.75 0.00 0.00 4.37
38 39 0.538057 AGTGACGGTCGACCCAAGTA 60.538 55.000 28.52 8.21 0.00 2.24
46 47 2.022764 TATTCGGTAGTGACGGTCGA 57.977 50.000 3.34 0.00 0.00 4.20
47 48 2.032550 ACATATTCGGTAGTGACGGTCG 59.967 50.000 3.34 0.00 0.00 4.79
49 50 3.444742 TCAACATATTCGGTAGTGACGGT 59.555 43.478 0.00 0.00 0.00 4.83
80 81 1.743394 GCACCACCTATTGTAGTTGGC 59.257 52.381 1.02 0.00 41.63 4.52
106 107 4.473520 AATCGGGTCTGGCTGCGG 62.474 66.667 0.00 0.00 0.00 5.69
107 108 2.892425 GAATCGGGTCTGGCTGCG 60.892 66.667 0.00 0.00 0.00 5.18
111 112 1.728490 GCCATTGAATCGGGTCTGGC 61.728 60.000 0.00 0.00 42.00 4.85
118 119 0.588252 GTCCATCGCCATTGAATCGG 59.412 55.000 0.00 0.00 0.00 4.18
133 134 1.265095 GTAGACGTCGTTGTGAGTCCA 59.735 52.381 10.46 0.00 34.41 4.02
137 138 2.316792 CCAAGTAGACGTCGTTGTGAG 58.683 52.381 20.03 6.93 0.00 3.51
139 140 0.782384 GCCAAGTAGACGTCGTTGTG 59.218 55.000 20.03 13.52 0.00 3.33
146 147 2.643232 GGGGTCGCCAAGTAGACGT 61.643 63.158 0.00 0.00 38.20 4.34
159 160 3.747976 GCATTGTGGCACGGGGTC 61.748 66.667 13.77 0.00 0.00 4.46
169 170 1.337074 ACCCAAGAAATGCGCATTGTG 60.337 47.619 34.48 28.39 0.00 3.33
179 180 4.077108 GGTCGAGGTAAAACCCAAGAAAT 58.923 43.478 0.00 0.00 39.75 2.17
212 213 2.266279 CCTGGGTCTTCCAAACTAGGA 58.734 52.381 0.00 0.00 46.51 2.94
213 214 1.340114 GCCTGGGTCTTCCAAACTAGG 60.340 57.143 0.00 0.00 46.51 3.02
251 252 1.207089 TGGGAGTACAAGCCGATGAAG 59.793 52.381 0.00 0.00 0.00 3.02
258 259 1.623811 TCTGTTCTGGGAGTACAAGCC 59.376 52.381 0.00 0.00 0.00 4.35
259 260 3.265791 CATCTGTTCTGGGAGTACAAGC 58.734 50.000 0.00 0.00 0.00 4.01
260 261 4.543590 ACATCTGTTCTGGGAGTACAAG 57.456 45.455 0.00 0.00 0.00 3.16
283 284 1.222115 GGCGGCTAAGTGATAAGCGG 61.222 60.000 0.00 0.00 39.71 5.52
284 285 1.548973 CGGCGGCTAAGTGATAAGCG 61.549 60.000 7.61 0.00 39.71 4.68
285 286 1.832411 GCGGCGGCTAAGTGATAAGC 61.832 60.000 9.78 0.00 38.03 3.09
286 287 0.529773 TGCGGCGGCTAAGTGATAAG 60.530 55.000 17.76 0.00 40.82 1.73
287 288 0.529773 CTGCGGCGGCTAAGTGATAA 60.530 55.000 17.76 0.00 40.82 1.75
288 289 1.067416 CTGCGGCGGCTAAGTGATA 59.933 57.895 17.76 0.00 40.82 2.15
292 296 3.382832 AGTCTGCGGCGGCTAAGT 61.383 61.111 17.76 5.49 40.82 2.24
316 320 0.038159 AGACGAAGGAAGTTGGCTCG 60.038 55.000 0.00 0.00 35.68 5.03
323 327 1.878656 CGGGAGCAGACGAAGGAAGT 61.879 60.000 0.00 0.00 0.00 3.01
327 331 2.564553 CTTCCGGGAGCAGACGAAGG 62.565 65.000 0.00 0.00 0.00 3.46
332 336 3.394836 AGGCTTCCGGGAGCAGAC 61.395 66.667 35.34 18.83 44.49 3.51
357 361 4.244425 CAACCTACCAGGATGTAGATCG 57.756 50.000 0.00 0.00 40.56 3.69
379 383 2.390938 CAAGTAACACGAGCGAAGACA 58.609 47.619 0.00 0.00 0.00 3.41
389 393 5.408604 AGAGAAGTTAATGCCAAGTAACACG 59.591 40.000 4.93 0.00 38.91 4.49
398 402 6.360370 ACACTAAGAGAGAAGTTAATGCCA 57.640 37.500 0.00 0.00 0.00 4.92
407 411 5.080731 CGTACGACAACACTAAGAGAGAAG 58.919 45.833 10.44 0.00 0.00 2.85
444 448 0.580578 CTCAAGAATCCATCTGCGCG 59.419 55.000 0.00 0.00 38.79 6.86
445 449 0.307146 GCTCAAGAATCCATCTGCGC 59.693 55.000 0.00 0.00 38.79 6.09
446 450 1.950828 AGCTCAAGAATCCATCTGCG 58.049 50.000 0.00 0.00 38.79 5.18
447 451 3.543665 AGAAGCTCAAGAATCCATCTGC 58.456 45.455 0.00 0.00 38.79 4.26
448 452 5.646793 TCAAAGAAGCTCAAGAATCCATCTG 59.353 40.000 0.00 0.00 38.79 2.90
449 453 5.647225 GTCAAAGAAGCTCAAGAATCCATCT 59.353 40.000 0.00 0.00 41.32 2.90
538 551 2.832129 CCAAGTGACTAGGCAGTTAGGA 59.168 50.000 18.45 0.00 34.21 2.94
614 629 1.000283 CTCTTCCTTGATCGCGCCTAT 60.000 52.381 0.00 0.00 0.00 2.57
621 636 1.480137 AGTGAGCCTCTTCCTTGATCG 59.520 52.381 0.00 0.00 0.00 3.69
642 657 0.825010 AACTCCAGCAGCAACCCAAG 60.825 55.000 0.00 0.00 0.00 3.61
643 658 0.476338 TAACTCCAGCAGCAACCCAA 59.524 50.000 0.00 0.00 0.00 4.12
648 663 2.106511 AGTCCTTTAACTCCAGCAGCAA 59.893 45.455 0.00 0.00 0.00 3.91
675 690 8.387813 TGGTAATTCAAGTTACAGGGATTAACT 58.612 33.333 4.72 0.00 40.74 2.24
680 695 7.182060 ACAATGGTAATTCAAGTTACAGGGAT 58.818 34.615 0.00 0.00 36.51 3.85
701 720 2.450476 GGGATGCTCAGTTCCAACAAT 58.550 47.619 0.00 0.00 33.43 2.71
702 721 1.547675 GGGGATGCTCAGTTCCAACAA 60.548 52.381 0.00 0.00 33.43 2.83
709 728 2.683211 AACAAAGGGGATGCTCAGTT 57.317 45.000 0.00 0.00 0.00 3.16
710 729 2.683211 AAACAAAGGGGATGCTCAGT 57.317 45.000 0.00 0.00 0.00 3.41
728 747 0.472471 AGACCTTTGTGGAGCGGAAA 59.528 50.000 0.00 0.00 39.71 3.13
742 761 0.620556 AATTGATGTGGCCGAGACCT 59.379 50.000 0.00 0.00 0.00 3.85
743 762 1.133025 CAAATTGATGTGGCCGAGACC 59.867 52.381 0.00 0.00 0.00 3.85
755 774 3.938963 CCTAGCCACGTACACAAATTGAT 59.061 43.478 0.00 0.00 0.00 2.57
759 778 2.673043 CGTCCTAGCCACGTACACAAAT 60.673 50.000 4.68 0.00 32.41 2.32
780 806 4.505324 AGGGAAGAAATTACAGGGTAGC 57.495 45.455 0.00 0.00 0.00 3.58
799 825 8.801715 AAAGCGTATCATTGCATTAATAAAGG 57.198 30.769 0.00 0.00 0.00 3.11
802 828 9.891828 CCTTAAAGCGTATCATTGCATTAATAA 57.108 29.630 0.00 0.00 34.83 1.40
806 832 6.317642 ACACCTTAAAGCGTATCATTGCATTA 59.682 34.615 0.00 0.00 0.00 1.90
940 985 3.802948 AGGATATGGTCGACAGTTGAC 57.197 47.619 18.91 12.15 35.60 3.18
941 986 3.118775 CCAAGGATATGGTCGACAGTTGA 60.119 47.826 18.91 0.00 35.65 3.18
942 987 3.198068 CCAAGGATATGGTCGACAGTTG 58.802 50.000 18.91 8.89 35.65 3.16
943 988 2.420129 GCCAAGGATATGGTCGACAGTT 60.420 50.000 18.91 3.59 42.75 3.16
944 989 1.139058 GCCAAGGATATGGTCGACAGT 59.861 52.381 18.91 7.54 42.75 3.55
945 990 1.138859 TGCCAAGGATATGGTCGACAG 59.861 52.381 18.91 0.00 42.75 3.51
946 991 1.199615 TGCCAAGGATATGGTCGACA 58.800 50.000 18.91 3.91 42.75 4.35
947 992 2.417719 GATGCCAAGGATATGGTCGAC 58.582 52.381 7.13 7.13 42.75 4.20
948 993 1.347707 GGATGCCAAGGATATGGTCGA 59.652 52.381 0.00 0.00 42.75 4.20
949 994 1.349026 AGGATGCCAAGGATATGGTCG 59.651 52.381 0.00 0.00 42.75 4.79
950 995 3.073650 AGAAGGATGCCAAGGATATGGTC 59.926 47.826 0.00 0.00 42.75 4.02
951 996 3.059097 AGAAGGATGCCAAGGATATGGT 58.941 45.455 0.00 0.00 42.75 3.55
952 997 3.181436 ACAGAAGGATGCCAAGGATATGG 60.181 47.826 0.00 0.00 43.70 2.74
953 998 4.096190 ACAGAAGGATGCCAAGGATATG 57.904 45.455 0.00 0.00 0.00 1.78
954 999 4.803329 AACAGAAGGATGCCAAGGATAT 57.197 40.909 0.00 0.00 0.00 1.63
955 1000 5.221925 GGATAACAGAAGGATGCCAAGGATA 60.222 44.000 0.00 0.00 0.00 2.59
956 1001 4.446889 GGATAACAGAAGGATGCCAAGGAT 60.447 45.833 0.00 0.00 0.00 3.24
957 1002 3.117888 GGATAACAGAAGGATGCCAAGGA 60.118 47.826 0.00 0.00 0.00 3.36
958 1003 3.217626 GGATAACAGAAGGATGCCAAGG 58.782 50.000 0.00 0.00 0.00 3.61
959 1004 3.889815 TGGATAACAGAAGGATGCCAAG 58.110 45.455 0.00 0.00 0.00 3.61
960 1005 4.524802 ATGGATAACAGAAGGATGCCAA 57.475 40.909 0.00 0.00 0.00 4.52
961 1006 4.505566 GCTATGGATAACAGAAGGATGCCA 60.506 45.833 0.00 0.00 0.00 4.92
962 1007 4.006319 GCTATGGATAACAGAAGGATGCC 58.994 47.826 0.00 0.00 0.00 4.40
963 1008 3.681897 CGCTATGGATAACAGAAGGATGC 59.318 47.826 0.00 0.00 0.00 3.91
964 1009 4.887748 ACGCTATGGATAACAGAAGGATG 58.112 43.478 0.00 0.00 0.00 3.51
970 1015 3.005472 GTGCCTACGCTATGGATAACAGA 59.995 47.826 0.00 0.00 35.36 3.41
992 1041 2.513204 CGTCCTCCATGGCTGCTG 60.513 66.667 6.96 0.00 35.26 4.41
1134 1190 3.181479 GGTCGCAGTACATGTCCTTGATA 60.181 47.826 0.00 0.00 0.00 2.15
1167 1237 0.558220 ATGTGATCGAGGGAGGGAGA 59.442 55.000 0.00 0.00 0.00 3.71
1215 1293 1.661341 GAAGCTGCCATGAATCGACT 58.339 50.000 0.00 0.00 0.00 4.18
1639 4586 2.675317 GCTGAACACGGCTAGACTGAAT 60.675 50.000 0.00 0.00 33.61 2.57
1666 4630 7.993101 ACAACTGAATGAACAGATGGATAATG 58.007 34.615 0.00 0.00 42.29 1.90
1727 4725 3.995636 AGATCTCTAGCAAACCACCCTA 58.004 45.455 0.00 0.00 0.00 3.53
1749 4747 0.669619 TGACACGAAACAGCGTAGGA 59.330 50.000 0.00 0.00 43.59 2.94
1929 4984 4.079385 TCCACTCTCCTATACTTACTGCCA 60.079 45.833 0.00 0.00 0.00 4.92
1944 5033 1.042559 CCCTCCTCTGCTCCACTCTC 61.043 65.000 0.00 0.00 0.00 3.20
1945 5034 1.001503 CCCTCCTCTGCTCCACTCT 59.998 63.158 0.00 0.00 0.00 3.24
1946 5035 0.033011 TACCCTCCTCTGCTCCACTC 60.033 60.000 0.00 0.00 0.00 3.51
1947 5036 0.413832 TTACCCTCCTCTGCTCCACT 59.586 55.000 0.00 0.00 0.00 4.00
1948 5037 1.139853 CATTACCCTCCTCTGCTCCAC 59.860 57.143 0.00 0.00 0.00 4.02
1949 5038 1.500474 CATTACCCTCCTCTGCTCCA 58.500 55.000 0.00 0.00 0.00 3.86
1950 5039 0.107643 GCATTACCCTCCTCTGCTCC 59.892 60.000 0.00 0.00 0.00 4.70
1951 5040 0.833287 TGCATTACCCTCCTCTGCTC 59.167 55.000 0.00 0.00 34.02 4.26
1952 5041 0.835941 CTGCATTACCCTCCTCTGCT 59.164 55.000 0.00 0.00 34.02 4.24
1953 5042 0.833287 TCTGCATTACCCTCCTCTGC 59.167 55.000 0.00 0.00 0.00 4.26
1959 5048 5.810080 AACCTATACTCTGCATTACCCTC 57.190 43.478 0.00 0.00 0.00 4.30
1963 5052 7.272978 TCCAGAAAACCTATACTCTGCATTAC 58.727 38.462 0.00 0.00 35.09 1.89
1987 5076 1.093159 CTCTGCCCTGCATCAAGTTC 58.907 55.000 0.00 0.00 38.13 3.01
1993 5082 1.524165 CTCTGCTCTGCCCTGCATC 60.524 63.158 0.00 0.00 38.13 3.91
2007 5108 1.524165 GATGCCCTGCTCTGCTCTG 60.524 63.158 0.00 0.00 0.00 3.35
2165 5297 0.647410 CACACGACGATGATGCTTCC 59.353 55.000 0.00 0.00 0.00 3.46
2285 5446 2.184533 TGACGGTGGAGTCATGGTAAT 58.815 47.619 0.00 0.00 45.18 1.89
2295 5456 1.546029 TGAGTTCATCTGACGGTGGAG 59.454 52.381 0.00 0.00 0.00 3.86
2329 5555 1.202976 AGTGAACTGCTGGCATTTCCT 60.203 47.619 18.28 13.39 35.57 3.36
2350 5576 8.079203 TCATTCGTGTGCAAAAGTACAATTTAT 58.921 29.630 0.00 0.00 0.00 1.40
2372 5757 8.506168 AAACATACGGTACATTTGATCTCATT 57.494 30.769 0.00 0.00 0.00 2.57
2380 5765 6.148811 AGACCTGAAAACATACGGTACATTTG 59.851 38.462 0.00 0.00 0.00 2.32
2450 5882 3.645268 GATGCCAGGGCCGAGGTTT 62.645 63.158 17.57 7.14 41.09 3.27
2492 7092 1.426423 CAGATTCATCCTCCGATGCG 58.574 55.000 0.00 0.00 44.83 4.73
2567 7167 8.644216 TGAACAGTGTATGAGTTTACCTTTAGA 58.356 33.333 0.00 0.00 0.00 2.10
2570 7170 9.787435 TTATGAACAGTGTATGAGTTTACCTTT 57.213 29.630 0.00 0.00 0.00 3.11
2607 7231 8.325421 TCATTAAAACGGAGCAAAAGTGTATA 57.675 30.769 0.00 0.00 0.00 1.47
2608 7232 7.209471 TCATTAAAACGGAGCAAAAGTGTAT 57.791 32.000 0.00 0.00 0.00 2.29
2609 7233 6.621316 TCATTAAAACGGAGCAAAAGTGTA 57.379 33.333 0.00 0.00 0.00 2.90
2611 7235 7.406799 AATTCATTAAAACGGAGCAAAAGTG 57.593 32.000 0.00 0.00 0.00 3.16
2612 7236 7.518211 GCAAATTCATTAAAACGGAGCAAAAGT 60.518 33.333 0.00 0.00 0.00 2.66
2613 7237 6.791775 GCAAATTCATTAAAACGGAGCAAAAG 59.208 34.615 0.00 0.00 0.00 2.27
2622 7304 9.009327 CCTACAGTATGCAAATTCATTAAAACG 57.991 33.333 0.00 0.00 42.53 3.60
2627 7309 7.269316 TCGTCCTACAGTATGCAAATTCATTA 58.731 34.615 0.00 0.00 42.53 1.90
2641 7323 2.695666 CAGGATTCCATCGTCCTACAGT 59.304 50.000 5.29 0.00 42.88 3.55
2686 7368 1.524621 CAGGCATAGCTTCGGTGGG 60.525 63.158 0.00 0.00 0.00 4.61
2855 7537 1.203994 GGCTACAGCGACTAGGAAACA 59.796 52.381 0.00 0.00 43.26 2.83
2863 7545 2.037367 TCCTGGGCTACAGCGACT 59.963 61.111 0.00 0.00 46.14 4.18
2973 7655 9.896645 ATGTTCAGATAGAGTCACACAATTTAT 57.103 29.630 0.00 0.00 0.00 1.40
3003 7691 9.525409 ACTACACAAACTTCACGGTATATATTC 57.475 33.333 0.00 0.00 0.00 1.75
3021 7725 8.902540 ATTGTCAAAATCTAGTCACTACACAA 57.097 30.769 0.00 0.00 0.00 3.33
3143 7856 3.526534 GAAGATCCCTTTCGTTCTCCTG 58.473 50.000 0.00 0.00 31.62 3.86
3152 7865 4.281941 GGGCAATTATGGAAGATCCCTTTC 59.718 45.833 0.00 0.00 35.03 2.62
3179 7892 9.461312 TGTGGAATAGCTGTTTAAAACTATGAT 57.539 29.630 0.00 0.00 0.00 2.45
3187 7900 9.237187 TGTCATTATGTGGAATAGCTGTTTAAA 57.763 29.630 0.00 0.00 0.00 1.52
3188 7901 8.673711 GTGTCATTATGTGGAATAGCTGTTTAA 58.326 33.333 0.00 0.00 0.00 1.52
3190 7903 6.095440 GGTGTCATTATGTGGAATAGCTGTTT 59.905 38.462 0.00 0.00 0.00 2.83
3191 7904 5.590259 GGTGTCATTATGTGGAATAGCTGTT 59.410 40.000 0.00 0.00 0.00 3.16
3192 7905 5.104360 AGGTGTCATTATGTGGAATAGCTGT 60.104 40.000 0.00 0.00 0.00 4.40
3193 7906 5.237996 CAGGTGTCATTATGTGGAATAGCTG 59.762 44.000 0.00 0.00 0.00 4.24
3194 7907 5.371526 CAGGTGTCATTATGTGGAATAGCT 58.628 41.667 0.00 0.00 0.00 3.32
3195 7908 4.023707 GCAGGTGTCATTATGTGGAATAGC 60.024 45.833 0.00 0.00 0.00 2.97
3196 7909 5.371526 AGCAGGTGTCATTATGTGGAATAG 58.628 41.667 0.00 0.00 0.00 1.73
3197 7910 5.104569 TGAGCAGGTGTCATTATGTGGAATA 60.105 40.000 0.00 0.00 0.00 1.75
3198 7911 4.202441 GAGCAGGTGTCATTATGTGGAAT 58.798 43.478 0.00 0.00 0.00 3.01
3199 7912 3.008923 TGAGCAGGTGTCATTATGTGGAA 59.991 43.478 0.00 0.00 0.00 3.53
3200 7913 2.571202 TGAGCAGGTGTCATTATGTGGA 59.429 45.455 0.00 0.00 0.00 4.02
3201 7914 2.989909 TGAGCAGGTGTCATTATGTGG 58.010 47.619 0.00 0.00 0.00 4.17
3202 7915 5.156355 GTTTTGAGCAGGTGTCATTATGTG 58.844 41.667 0.00 0.00 0.00 3.21
3203 7916 4.218417 GGTTTTGAGCAGGTGTCATTATGT 59.782 41.667 0.00 0.00 0.00 2.29
3204 7917 4.460382 AGGTTTTGAGCAGGTGTCATTATG 59.540 41.667 0.00 0.00 0.00 1.90
3205 7918 4.666512 AGGTTTTGAGCAGGTGTCATTAT 58.333 39.130 0.00 0.00 0.00 1.28
3206 7919 4.098914 AGGTTTTGAGCAGGTGTCATTA 57.901 40.909 0.00 0.00 0.00 1.90
3207 7920 2.949447 AGGTTTTGAGCAGGTGTCATT 58.051 42.857 0.00 0.00 0.00 2.57
3208 7921 2.664402 AGGTTTTGAGCAGGTGTCAT 57.336 45.000 0.00 0.00 0.00 3.06
3209 7922 3.788227 ATAGGTTTTGAGCAGGTGTCA 57.212 42.857 0.00 0.00 0.00 3.58
3210 7923 3.623510 GCTATAGGTTTTGAGCAGGTGTC 59.376 47.826 1.04 0.00 34.96 3.67
3211 7924 3.264450 AGCTATAGGTTTTGAGCAGGTGT 59.736 43.478 0.00 0.00 37.40 4.16
3212 7925 3.878778 AGCTATAGGTTTTGAGCAGGTG 58.121 45.455 0.00 0.00 37.40 4.00
3213 7926 4.101741 CCTAGCTATAGGTTTTGAGCAGGT 59.898 45.833 10.19 0.00 43.33 4.00
3214 7927 4.636249 CCTAGCTATAGGTTTTGAGCAGG 58.364 47.826 10.19 5.08 43.33 4.85
3240 7953 6.767902 CCTTCAAATCAGTTATAGCAAGGCTA 59.232 38.462 0.00 0.00 45.55 3.93
3241 7954 5.591877 CCTTCAAATCAGTTATAGCAAGGCT 59.408 40.000 0.00 0.00 43.41 4.58
3242 7955 5.221126 CCCTTCAAATCAGTTATAGCAAGGC 60.221 44.000 0.00 0.00 0.00 4.35
3243 7956 5.221126 GCCCTTCAAATCAGTTATAGCAAGG 60.221 44.000 0.00 0.00 0.00 3.61
3244 7957 5.221126 GGCCCTTCAAATCAGTTATAGCAAG 60.221 44.000 0.00 0.00 0.00 4.01
3245 7958 4.644685 GGCCCTTCAAATCAGTTATAGCAA 59.355 41.667 0.00 0.00 0.00 3.91
3246 7959 4.207165 GGCCCTTCAAATCAGTTATAGCA 58.793 43.478 0.00 0.00 0.00 3.49
3247 7960 3.251004 CGGCCCTTCAAATCAGTTATAGC 59.749 47.826 0.00 0.00 0.00 2.97
3248 7961 3.251004 GCGGCCCTTCAAATCAGTTATAG 59.749 47.826 0.00 0.00 0.00 1.31
3249 7962 3.211045 GCGGCCCTTCAAATCAGTTATA 58.789 45.455 0.00 0.00 0.00 0.98
3250 7963 2.024414 GCGGCCCTTCAAATCAGTTAT 58.976 47.619 0.00 0.00 0.00 1.89
3251 7964 1.459450 GCGGCCCTTCAAATCAGTTA 58.541 50.000 0.00 0.00 0.00 2.24
3252 7965 1.250840 GGCGGCCCTTCAAATCAGTT 61.251 55.000 8.12 0.00 0.00 3.16
3253 7966 1.678970 GGCGGCCCTTCAAATCAGT 60.679 57.895 8.12 0.00 0.00 3.41
3254 7967 2.764314 CGGCGGCCCTTCAAATCAG 61.764 63.158 14.55 0.00 0.00 2.90
3255 7968 2.749839 CGGCGGCCCTTCAAATCA 60.750 61.111 14.55 0.00 0.00 2.57
3256 7969 4.193334 GCGGCGGCCCTTCAAATC 62.193 66.667 14.55 0.00 0.00 2.17
3257 7970 2.624674 ATAGCGGCGGCCCTTCAAAT 62.625 55.000 14.55 0.00 41.24 2.32
3258 7971 2.830186 AATAGCGGCGGCCCTTCAAA 62.830 55.000 14.55 0.00 41.24 2.69
3259 7972 2.830186 AAATAGCGGCGGCCCTTCAA 62.830 55.000 14.55 0.00 41.24 2.69
3260 7973 3.338275 AAATAGCGGCGGCCCTTCA 62.338 57.895 14.55 0.00 41.24 3.02
3261 7974 2.516225 AAATAGCGGCGGCCCTTC 60.516 61.111 14.55 2.80 41.24 3.46
3262 7975 2.828549 CAAATAGCGGCGGCCCTT 60.829 61.111 14.55 4.16 41.24 3.95
3268 7981 2.187599 GGCTATGGCAAATAGCGGCG 62.188 60.000 18.93 0.51 45.83 6.46
3269 7982 1.172180 TGGCTATGGCAAATAGCGGC 61.172 55.000 18.93 10.46 45.83 6.53
3270 7983 0.877071 CTGGCTATGGCAAATAGCGG 59.123 55.000 18.93 12.85 45.83 5.52
3271 7984 0.239347 GCTGGCTATGGCAAATAGCG 59.761 55.000 18.93 10.87 45.83 4.26
3272 7985 1.268899 CAGCTGGCTATGGCAAATAGC 59.731 52.381 17.93 17.93 44.56 2.97
3273 7986 2.579873 ACAGCTGGCTATGGCAAATAG 58.420 47.619 19.93 0.00 37.73 1.73
3274 7987 2.734755 ACAGCTGGCTATGGCAAATA 57.265 45.000 19.93 0.00 37.73 1.40
3275 7988 1.856629 AACAGCTGGCTATGGCAAAT 58.143 45.000 19.93 0.00 37.73 2.32
3276 7989 1.631405 AAACAGCTGGCTATGGCAAA 58.369 45.000 19.93 0.00 37.73 3.68
3277 7990 2.505650 TAAACAGCTGGCTATGGCAA 57.494 45.000 19.93 0.00 37.73 4.52
3278 7991 2.505650 TTAAACAGCTGGCTATGGCA 57.494 45.000 19.93 0.00 40.87 4.92
3279 7992 3.056891 TGTTTTAAACAGCTGGCTATGGC 60.057 43.478 19.93 3.96 36.25 4.40
3280 7993 4.218417 AGTGTTTTAAACAGCTGGCTATGG 59.782 41.667 19.93 0.00 43.10 2.74
3281 7994 5.156355 CAGTGTTTTAAACAGCTGGCTATG 58.844 41.667 19.93 0.00 43.10 2.23
3282 7995 4.827284 ACAGTGTTTTAAACAGCTGGCTAT 59.173 37.500 27.01 14.41 43.10 2.97
3283 7996 4.204012 ACAGTGTTTTAAACAGCTGGCTA 58.796 39.130 27.01 5.77 43.10 3.93
3284 7997 3.023832 ACAGTGTTTTAAACAGCTGGCT 58.976 40.909 27.01 14.59 43.10 4.75
3285 7998 3.372060 GACAGTGTTTTAAACAGCTGGC 58.628 45.455 27.01 24.28 43.10 4.85
3286 7999 3.380004 TGGACAGTGTTTTAAACAGCTGG 59.620 43.478 27.01 15.37 43.10 4.85
3287 8000 4.335315 TCTGGACAGTGTTTTAAACAGCTG 59.665 41.667 24.48 24.48 43.10 4.24
3288 8001 4.523083 TCTGGACAGTGTTTTAAACAGCT 58.477 39.130 11.07 8.60 43.10 4.24
3289 8002 4.893424 TCTGGACAGTGTTTTAAACAGC 57.107 40.909 11.07 6.55 43.10 4.40
3290 8003 6.018262 TCGATTCTGGACAGTGTTTTAAACAG 60.018 38.462 11.07 3.28 43.10 3.16
3291 8004 5.818336 TCGATTCTGGACAGTGTTTTAAACA 59.182 36.000 6.41 6.41 39.52 2.83
3292 8005 6.295039 TCGATTCTGGACAGTGTTTTAAAC 57.705 37.500 0.00 0.20 0.00 2.01
3293 8006 8.610248 TTATCGATTCTGGACAGTGTTTTAAA 57.390 30.769 1.71 0.00 0.00 1.52
3294 8007 8.610248 TTTATCGATTCTGGACAGTGTTTTAA 57.390 30.769 1.71 0.00 0.00 1.52
3295 8008 7.148474 GCTTTATCGATTCTGGACAGTGTTTTA 60.148 37.037 1.71 0.00 0.00 1.52
3296 8009 6.348540 GCTTTATCGATTCTGGACAGTGTTTT 60.349 38.462 1.71 0.00 0.00 2.43
3297 8010 5.122396 GCTTTATCGATTCTGGACAGTGTTT 59.878 40.000 1.71 0.00 0.00 2.83
3298 8011 4.631813 GCTTTATCGATTCTGGACAGTGTT 59.368 41.667 1.71 0.00 0.00 3.32
3299 8012 4.184629 GCTTTATCGATTCTGGACAGTGT 58.815 43.478 1.71 0.00 0.00 3.55
3300 8013 4.033358 GTGCTTTATCGATTCTGGACAGTG 59.967 45.833 1.71 0.00 0.00 3.66
3301 8014 4.184629 GTGCTTTATCGATTCTGGACAGT 58.815 43.478 1.71 0.00 0.00 3.55
3302 8015 3.557595 GGTGCTTTATCGATTCTGGACAG 59.442 47.826 1.71 0.00 0.00 3.51
3303 8016 3.531538 GGTGCTTTATCGATTCTGGACA 58.468 45.455 1.71 0.00 0.00 4.02
3304 8017 2.872858 GGGTGCTTTATCGATTCTGGAC 59.127 50.000 1.71 5.34 0.00 4.02
3305 8018 2.503765 TGGGTGCTTTATCGATTCTGGA 59.496 45.455 1.71 0.00 0.00 3.86
3306 8019 2.917933 TGGGTGCTTTATCGATTCTGG 58.082 47.619 1.71 0.00 0.00 3.86
3307 8020 4.384056 AGATGGGTGCTTTATCGATTCTG 58.616 43.478 1.71 0.00 0.00 3.02
3308 8021 4.346418 AGAGATGGGTGCTTTATCGATTCT 59.654 41.667 1.71 0.00 0.00 2.40
3309 8022 4.636249 AGAGATGGGTGCTTTATCGATTC 58.364 43.478 1.71 0.00 0.00 2.52
3310 8023 4.696479 AGAGATGGGTGCTTTATCGATT 57.304 40.909 1.71 0.00 0.00 3.34
3311 8024 5.542779 GTTAGAGATGGGTGCTTTATCGAT 58.457 41.667 2.16 2.16 0.00 3.59
3312 8025 4.499188 CGTTAGAGATGGGTGCTTTATCGA 60.499 45.833 0.00 0.00 0.00 3.59
3313 8026 3.736252 CGTTAGAGATGGGTGCTTTATCG 59.264 47.826 0.00 0.00 0.00 2.92
3314 8027 3.495001 GCGTTAGAGATGGGTGCTTTATC 59.505 47.826 0.00 0.00 0.00 1.75
3315 8028 3.467803 GCGTTAGAGATGGGTGCTTTAT 58.532 45.455 0.00 0.00 0.00 1.40
3316 8029 2.737359 CGCGTTAGAGATGGGTGCTTTA 60.737 50.000 0.00 0.00 0.00 1.85
3317 8030 1.739067 GCGTTAGAGATGGGTGCTTT 58.261 50.000 0.00 0.00 0.00 3.51
3318 8031 0.460284 CGCGTTAGAGATGGGTGCTT 60.460 55.000 0.00 0.00 0.00 3.91
3319 8032 1.141881 CGCGTTAGAGATGGGTGCT 59.858 57.895 0.00 0.00 0.00 4.40
3320 8033 1.146358 GACGCGTTAGAGATGGGTGC 61.146 60.000 15.53 0.00 40.19 5.01
3321 8034 0.866061 CGACGCGTTAGAGATGGGTG 60.866 60.000 15.53 0.00 40.19 4.61
3332 8045 1.591594 CAGGATATGGCGACGCGTT 60.592 57.895 15.53 6.05 0.00 4.84
3333 8046 1.806461 ATCAGGATATGGCGACGCGT 61.806 55.000 13.85 13.85 0.00 6.01
3339 8052 2.158986 GGAGGATGATCAGGATATGGCG 60.159 54.545 0.09 0.00 0.00 5.69
3352 8065 0.106469 CAGGAGGACGAGGAGGATGA 60.106 60.000 0.00 0.00 0.00 2.92
3371 8090 3.119495 GGCTTGTGGTATTTGTGATGACC 60.119 47.826 0.00 0.00 0.00 4.02
3379 8098 3.009723 ACGATGAGGCTTGTGGTATTTG 58.990 45.455 0.00 0.00 0.00 2.32
3410 8129 0.033228 GCTAGCGATGGATGCTGAGT 59.967 55.000 0.00 0.00 43.85 3.41
3454 8173 3.523087 TTGTGCTAACGCCGAGGCA 62.523 57.895 15.03 0.00 42.06 4.75
3455 8174 2.740714 CTTGTGCTAACGCCGAGGC 61.741 63.158 3.59 3.59 34.43 4.70
3467 8186 3.125829 CACACACAGACATATCCTTGTGC 59.874 47.826 3.12 0.00 0.00 4.57
3470 8189 3.935203 GACCACACACAGACATATCCTTG 59.065 47.826 0.00 0.00 0.00 3.61
3475 8194 2.166459 CGAGGACCACACACAGACATAT 59.834 50.000 0.00 0.00 0.00 1.78
3478 8197 1.040893 ACGAGGACCACACACAGACA 61.041 55.000 0.00 0.00 0.00 3.41
3481 8200 1.371758 CGACGAGGACCACACACAG 60.372 63.158 0.00 0.00 0.00 3.66
3486 8205 2.281002 TCGACGACGAGGACCACA 60.281 61.111 5.75 0.00 43.81 4.17
3505 8224 4.221482 GTCCCCGACTTCCTCTACTTTTTA 59.779 45.833 0.00 0.00 0.00 1.52
3508 8227 2.177734 GTCCCCGACTTCCTCTACTTT 58.822 52.381 0.00 0.00 0.00 2.66
3531 8250 2.101415 CTCATAGATCACCAAGCCGACA 59.899 50.000 0.00 0.00 0.00 4.35
3532 8251 2.546795 CCTCATAGATCACCAAGCCGAC 60.547 54.545 0.00 0.00 0.00 4.79
3536 8255 2.486191 CCCACCTCATAGATCACCAAGC 60.486 54.545 0.00 0.00 0.00 4.01
3538 8257 2.126882 CCCCACCTCATAGATCACCAA 58.873 52.381 0.00 0.00 0.00 3.67
3539 8258 1.806496 CCCCACCTCATAGATCACCA 58.194 55.000 0.00 0.00 0.00 4.17
3546 8265 0.469917 ATCAACGCCCCACCTCATAG 59.530 55.000 0.00 0.00 0.00 2.23
3548 8267 1.077501 CATCAACGCCCCACCTCAT 60.078 57.895 0.00 0.00 0.00 2.90
3549 8268 2.220586 TCATCAACGCCCCACCTCA 61.221 57.895 0.00 0.00 0.00 3.86
3554 8273 1.971167 GCAAGTCATCAACGCCCCA 60.971 57.895 0.00 0.00 0.00 4.96
3562 8281 1.375396 CGAACCGGGCAAGTCATCA 60.375 57.895 6.32 0.00 0.00 3.07
3565 8284 2.204461 TCTCGAACCGGGCAAGTCA 61.204 57.895 6.32 0.00 0.00 3.41
3566 8285 1.737008 GTCTCGAACCGGGCAAGTC 60.737 63.158 6.32 0.00 0.00 3.01
3571 8290 4.790861 GGTCGTCTCGAACCGGGC 62.791 72.222 6.32 0.00 37.65 6.13
3612 8337 2.046314 AACCCATGGAAGCGACGG 60.046 61.111 15.22 0.00 0.00 4.79
3627 8352 1.068541 GGACGGATCAGCCAAAACAAC 60.069 52.381 0.00 0.00 35.94 3.32
3672 8397 2.462503 CGATCGGCGGAAGGAAAAA 58.537 52.632 7.38 0.00 36.03 1.94
3684 8409 1.010797 CCGTACGTACACCGATCGG 60.011 63.158 32.20 32.20 44.11 4.18
3685 8410 1.652329 GCCGTACGTACACCGATCG 60.652 63.158 24.50 8.51 40.70 3.69
3689 8414 1.226211 CTCAGCCGTACGTACACCG 60.226 63.158 24.50 11.42 44.03 4.94
3690 8415 1.063174 CTACTCAGCCGTACGTACACC 59.937 57.143 24.50 14.30 0.00 4.16
3691 8416 2.002586 TCTACTCAGCCGTACGTACAC 58.997 52.381 24.50 15.79 0.00 2.90
3692 8417 2.385013 TCTACTCAGCCGTACGTACA 57.615 50.000 24.50 4.60 0.00 2.90
3695 8420 1.669779 GACATCTACTCAGCCGTACGT 59.330 52.381 15.21 0.00 0.00 3.57
3697 8422 1.002684 CCGACATCTACTCAGCCGTAC 60.003 57.143 0.00 0.00 0.00 3.67
3698 8423 1.134310 TCCGACATCTACTCAGCCGTA 60.134 52.381 0.00 0.00 0.00 4.02
3699 8424 0.393944 TCCGACATCTACTCAGCCGT 60.394 55.000 0.00 0.00 0.00 5.68
3700 8425 0.309302 CTCCGACATCTACTCAGCCG 59.691 60.000 0.00 0.00 0.00 5.52
3701 8426 1.394618 ACTCCGACATCTACTCAGCC 58.605 55.000 0.00 0.00 0.00 4.85
3702 8427 2.164624 ACAACTCCGACATCTACTCAGC 59.835 50.000 0.00 0.00 0.00 4.26
3703 8428 4.082733 TCAACAACTCCGACATCTACTCAG 60.083 45.833 0.00 0.00 0.00 3.35
3704 8429 3.824443 TCAACAACTCCGACATCTACTCA 59.176 43.478 0.00 0.00 0.00 3.41
3705 8430 4.436242 TCAACAACTCCGACATCTACTC 57.564 45.455 0.00 0.00 0.00 2.59
3720 8445 0.680618 CAAGGCAGCCCAATCAACAA 59.319 50.000 8.22 0.00 0.00 2.83
3740 8465 2.029518 GTGTTGGGCAAGCCAAGC 59.970 61.111 13.87 4.19 37.98 4.01
3741 8466 1.327303 TAAGTGTTGGGCAAGCCAAG 58.673 50.000 13.87 0.00 37.98 3.61
3742 8467 2.008242 ATAAGTGTTGGGCAAGCCAA 57.992 45.000 13.87 0.00 37.98 4.52
3743 8468 2.307392 TCTATAAGTGTTGGGCAAGCCA 59.693 45.455 13.87 0.00 37.98 4.75
3744 8469 2.999331 TCTATAAGTGTTGGGCAAGCC 58.001 47.619 1.52 1.52 0.00 4.35
3745 8470 3.378427 CCTTCTATAAGTGTTGGGCAAGC 59.622 47.826 0.00 0.00 0.00 4.01
3746 8471 3.378427 GCCTTCTATAAGTGTTGGGCAAG 59.622 47.826 0.00 0.00 38.35 4.01
3747 8472 3.352648 GCCTTCTATAAGTGTTGGGCAA 58.647 45.455 0.00 0.00 38.35 4.52
3748 8473 2.679639 CGCCTTCTATAAGTGTTGGGCA 60.680 50.000 0.00 0.00 38.37 5.36
3749 8474 1.940613 CGCCTTCTATAAGTGTTGGGC 59.059 52.381 0.00 0.00 35.53 5.36
3750 8475 2.936498 CACGCCTTCTATAAGTGTTGGG 59.064 50.000 0.00 0.00 0.00 4.12
3751 8476 2.351726 GCACGCCTTCTATAAGTGTTGG 59.648 50.000 0.00 0.00 35.46 3.77
3752 8477 3.000041 TGCACGCCTTCTATAAGTGTTG 59.000 45.455 0.00 0.00 35.46 3.33
3753 8478 3.328382 TGCACGCCTTCTATAAGTGTT 57.672 42.857 0.00 0.00 35.46 3.32
3754 8479 3.198068 CATGCACGCCTTCTATAAGTGT 58.802 45.455 0.00 0.00 35.46 3.55
3755 8480 2.032549 GCATGCACGCCTTCTATAAGTG 60.033 50.000 14.21 0.00 36.05 3.16
3756 8481 2.213499 GCATGCACGCCTTCTATAAGT 58.787 47.619 14.21 0.00 0.00 2.24
3757 8482 2.212652 TGCATGCACGCCTTCTATAAG 58.787 47.619 18.46 0.00 0.00 1.73
3758 8483 2.323968 TGCATGCACGCCTTCTATAA 57.676 45.000 18.46 0.00 0.00 0.98
3759 8484 2.145536 CATGCATGCACGCCTTCTATA 58.854 47.619 25.37 0.00 0.00 1.31
3760 8485 0.949397 CATGCATGCACGCCTTCTAT 59.051 50.000 25.37 0.00 0.00 1.98
3761 8486 2.396700 CATGCATGCACGCCTTCTA 58.603 52.632 25.37 0.00 0.00 2.10
3762 8487 3.193757 CATGCATGCACGCCTTCT 58.806 55.556 25.37 1.29 0.00 2.85
3773 8498 1.520494 GACTCGATCCATGCATGCAT 58.480 50.000 27.46 27.46 37.08 3.96
3774 8499 0.877213 CGACTCGATCCATGCATGCA 60.877 55.000 25.04 25.04 0.00 3.96
3775 8500 1.563435 CCGACTCGATCCATGCATGC 61.563 60.000 21.69 11.82 0.00 4.06
3776 8501 0.032540 TCCGACTCGATCCATGCATG 59.967 55.000 20.19 20.19 0.00 4.06
3777 8502 0.316522 CTCCGACTCGATCCATGCAT 59.683 55.000 0.00 0.00 0.00 3.96
3778 8503 1.037579 ACTCCGACTCGATCCATGCA 61.038 55.000 0.00 0.00 0.00 3.96
3779 8504 0.596083 CACTCCGACTCGATCCATGC 60.596 60.000 0.00 0.00 0.00 4.06
3780 8505 0.596083 GCACTCCGACTCGATCCATG 60.596 60.000 0.00 0.00 0.00 3.66
3781 8506 1.037579 TGCACTCCGACTCGATCCAT 61.038 55.000 0.00 0.00 0.00 3.41
3782 8507 1.248101 TTGCACTCCGACTCGATCCA 61.248 55.000 0.00 0.00 0.00 3.41
3783 8508 0.526524 CTTGCACTCCGACTCGATCC 60.527 60.000 0.00 0.00 0.00 3.36
3784 8509 0.171455 ACTTGCACTCCGACTCGATC 59.829 55.000 0.00 0.00 0.00 3.69
3785 8510 0.171455 GACTTGCACTCCGACTCGAT 59.829 55.000 0.00 0.00 0.00 3.59
3786 8511 1.579932 GACTTGCACTCCGACTCGA 59.420 57.895 0.00 0.00 0.00 4.04
3787 8512 1.797933 CGACTTGCACTCCGACTCG 60.798 63.158 0.00 0.00 0.00 4.18
3788 8513 1.444553 CCGACTTGCACTCCGACTC 60.445 63.158 0.00 0.00 0.00 3.36
3789 8514 1.901948 TCCGACTTGCACTCCGACT 60.902 57.895 0.00 0.00 0.00 4.18
3790 8515 1.733399 GTCCGACTTGCACTCCGAC 60.733 63.158 0.00 0.00 0.00 4.79
3791 8516 2.649034 GTCCGACTTGCACTCCGA 59.351 61.111 0.00 0.00 0.00 4.55
3792 8517 2.432628 GGTCCGACTTGCACTCCG 60.433 66.667 0.00 0.00 0.00 4.63
3793 8518 2.430382 TTCGGTCCGACTTGCACTCC 62.430 60.000 15.07 0.00 34.89 3.85
3794 8519 1.006571 TTCGGTCCGACTTGCACTC 60.007 57.895 15.07 0.00 34.89 3.51
3795 8520 1.300697 GTTCGGTCCGACTTGCACT 60.301 57.895 15.07 0.00 34.89 4.40
3796 8521 1.593209 TGTTCGGTCCGACTTGCAC 60.593 57.895 15.07 9.85 34.89 4.57
3797 8522 1.593209 GTGTTCGGTCCGACTTGCA 60.593 57.895 15.07 8.12 34.89 4.08
3798 8523 1.300697 AGTGTTCGGTCCGACTTGC 60.301 57.895 15.07 5.47 34.89 4.01
3799 8524 0.944311 CCAGTGTTCGGTCCGACTTG 60.944 60.000 15.07 9.69 34.89 3.16
3800 8525 1.366366 CCAGTGTTCGGTCCGACTT 59.634 57.895 15.07 0.00 34.89 3.01
3801 8526 1.397390 AACCAGTGTTCGGTCCGACT 61.397 55.000 15.07 5.81 34.99 4.18
3802 8527 1.068585 AACCAGTGTTCGGTCCGAC 59.931 57.895 15.07 10.04 34.99 4.79
3803 8528 1.068417 CAACCAGTGTTCGGTCCGA 59.932 57.895 10.71 10.71 34.99 4.55
3804 8529 2.604174 GCAACCAGTGTTCGGTCCG 61.604 63.158 4.39 4.39 34.99 4.79
3805 8530 1.098712 TTGCAACCAGTGTTCGGTCC 61.099 55.000 0.00 0.00 34.99 4.46
3806 8531 0.028902 GTTGCAACCAGTGTTCGGTC 59.971 55.000 19.15 0.00 34.99 4.79
3807 8532 1.711060 CGTTGCAACCAGTGTTCGGT 61.711 55.000 23.42 0.00 38.85 4.69
3808 8533 1.010125 CGTTGCAACCAGTGTTCGG 60.010 57.895 23.42 2.51 30.42 4.30
3809 8534 1.010125 CCGTTGCAACCAGTGTTCG 60.010 57.895 23.42 9.28 30.42 3.95
3810 8535 0.028902 GTCCGTTGCAACCAGTGTTC 59.971 55.000 23.42 4.25 30.42 3.18
3811 8536 0.678366 TGTCCGTTGCAACCAGTGTT 60.678 50.000 23.42 0.00 34.14 3.32
3812 8537 0.465460 ATGTCCGTTGCAACCAGTGT 60.465 50.000 23.42 4.90 0.00 3.55
3813 8538 0.040157 CATGTCCGTTGCAACCAGTG 60.040 55.000 23.42 9.46 0.00 3.66
3814 8539 1.795170 GCATGTCCGTTGCAACCAGT 61.795 55.000 23.42 3.11 39.90 4.00
3815 8540 1.081242 GCATGTCCGTTGCAACCAG 60.081 57.895 23.42 15.14 39.90 4.00
3816 8541 2.902419 CGCATGTCCGTTGCAACCA 61.902 57.895 23.42 15.82 40.14 3.67
3817 8542 2.126888 CGCATGTCCGTTGCAACC 60.127 61.111 23.42 10.47 40.14 3.77
3818 8543 1.725625 CACGCATGTCCGTTGCAAC 60.726 57.895 19.89 19.89 39.83 4.17
3819 8544 2.636462 CACGCATGTCCGTTGCAA 59.364 55.556 0.00 0.00 39.83 4.08
3820 8545 4.024143 GCACGCATGTCCGTTGCA 62.024 61.111 11.98 0.00 39.83 4.08
3821 8546 3.651480 GAGCACGCATGTCCGTTGC 62.651 63.158 0.00 3.77 39.83 4.17
3822 8547 2.476051 GAGCACGCATGTCCGTTG 59.524 61.111 0.00 0.00 39.83 4.10
3823 8548 3.112075 CGAGCACGCATGTCCGTT 61.112 61.111 0.00 0.00 39.83 4.44
3824 8549 4.357947 ACGAGCACGCATGTCCGT 62.358 61.111 2.62 0.00 43.96 4.69
3825 8550 3.842126 CACGAGCACGCATGTCCG 61.842 66.667 2.62 0.00 43.96 4.79
3826 8551 4.152625 GCACGAGCACGCATGTCC 62.153 66.667 2.62 0.00 43.96 4.02
3840 8565 3.755628 CAGTGGCCATGGCTGCAC 61.756 66.667 34.70 31.35 41.60 4.57
3843 8568 2.283388 AACCAGTGGCCATGGCTG 60.283 61.111 34.70 24.74 41.87 4.85
3844 8569 2.283388 CAACCAGTGGCCATGGCT 60.283 61.111 34.70 14.32 41.87 4.75
3845 8570 4.073200 GCAACCAGTGGCCATGGC 62.073 66.667 29.47 29.47 41.87 4.40
3846 8571 2.208619 TTGCAACCAGTGGCCATGG 61.209 57.895 24.44 24.44 43.87 3.66
3847 8572 1.005867 GTTGCAACCAGTGGCCATG 60.006 57.895 19.15 8.53 0.00 3.66
3848 8573 1.457267 TGTTGCAACCAGTGGCCAT 60.457 52.632 26.14 0.00 0.00 4.40
3849 8574 2.043551 TGTTGCAACCAGTGGCCA 60.044 55.556 26.14 0.00 0.00 5.36
3850 8575 1.827789 TCTGTTGCAACCAGTGGCC 60.828 57.895 26.14 0.00 0.00 5.36
3851 8576 1.360192 GTCTGTTGCAACCAGTGGC 59.640 57.895 26.14 11.73 0.00 5.01
3852 8577 0.381801 GTGTCTGTTGCAACCAGTGG 59.618 55.000 26.14 7.91 0.00 4.00
3853 8578 0.027979 CGTGTCTGTTGCAACCAGTG 59.972 55.000 26.14 13.61 0.00 3.66
3854 8579 1.095228 CCGTGTCTGTTGCAACCAGT 61.095 55.000 26.14 0.00 0.00 4.00
3855 8580 1.648720 CCGTGTCTGTTGCAACCAG 59.351 57.895 26.14 21.22 0.00 4.00
3856 8581 1.821759 CCCGTGTCTGTTGCAACCA 60.822 57.895 26.14 14.43 0.00 3.67
3857 8582 2.551912 CCCCGTGTCTGTTGCAACC 61.552 63.158 26.14 11.91 0.00 3.77
3858 8583 1.507141 CTCCCCGTGTCTGTTGCAAC 61.507 60.000 22.83 22.83 0.00 4.17
3859 8584 1.227823 CTCCCCGTGTCTGTTGCAA 60.228 57.895 0.00 0.00 0.00 4.08
3860 8585 1.480212 ATCTCCCCGTGTCTGTTGCA 61.480 55.000 0.00 0.00 0.00 4.08
3861 8586 1.021390 CATCTCCCCGTGTCTGTTGC 61.021 60.000 0.00 0.00 0.00 4.17
3862 8587 0.391661 CCATCTCCCCGTGTCTGTTG 60.392 60.000 0.00 0.00 0.00 3.33
3863 8588 1.553690 CCCATCTCCCCGTGTCTGTT 61.554 60.000 0.00 0.00 0.00 3.16
3864 8589 1.990060 CCCATCTCCCCGTGTCTGT 60.990 63.158 0.00 0.00 0.00 3.41
3865 8590 1.264749 TTCCCATCTCCCCGTGTCTG 61.265 60.000 0.00 0.00 0.00 3.51
3866 8591 0.978146 CTTCCCATCTCCCCGTGTCT 60.978 60.000 0.00 0.00 0.00 3.41
3867 8592 0.976073 TCTTCCCATCTCCCCGTGTC 60.976 60.000 0.00 0.00 0.00 3.67
3868 8593 0.978146 CTCTTCCCATCTCCCCGTGT 60.978 60.000 0.00 0.00 0.00 4.49
3869 8594 1.690219 CCTCTTCCCATCTCCCCGTG 61.690 65.000 0.00 0.00 0.00 4.94
3870 8595 1.383248 CCTCTTCCCATCTCCCCGT 60.383 63.158 0.00 0.00 0.00 5.28
3871 8596 2.812619 GCCTCTTCCCATCTCCCCG 61.813 68.421 0.00 0.00 0.00 5.73
3872 8597 2.812619 CGCCTCTTCCCATCTCCCC 61.813 68.421 0.00 0.00 0.00 4.81
3873 8598 2.812619 CCGCCTCTTCCCATCTCCC 61.813 68.421 0.00 0.00 0.00 4.30
3874 8599 2.825264 CCGCCTCTTCCCATCTCC 59.175 66.667 0.00 0.00 0.00 3.71
3875 8600 2.110006 GCCGCCTCTTCCCATCTC 59.890 66.667 0.00 0.00 0.00 2.75
3876 8601 3.483869 GGCCGCCTCTTCCCATCT 61.484 66.667 0.71 0.00 0.00 2.90
3877 8602 3.468326 GAGGCCGCCTCTTCCCATC 62.468 68.421 29.19 3.73 46.41 3.51
3878 8603 3.483869 GAGGCCGCCTCTTCCCAT 61.484 66.667 29.19 0.00 46.41 4.00
3891 8616 3.869272 CAAGCACGGCGATGAGGC 61.869 66.667 16.62 9.02 42.76 4.70
3892 8617 2.434884 ACAAGCACGGCGATGAGG 60.435 61.111 16.62 2.12 0.00 3.86
3893 8618 2.792290 CGACAAGCACGGCGATGAG 61.792 63.158 16.62 0.95 0.00 2.90
3894 8619 2.809174 CGACAAGCACGGCGATGA 60.809 61.111 16.62 0.00 0.00 2.92
3895 8620 3.853330 CCGACAAGCACGGCGATG 61.853 66.667 16.62 9.66 43.74 3.84
3902 8627 3.112709 GAGACCGCCGACAAGCAC 61.113 66.667 0.00 0.00 0.00 4.40
3903 8628 4.717629 CGAGACCGCCGACAAGCA 62.718 66.667 0.00 0.00 0.00 3.91
3904 8629 4.719369 ACGAGACCGCCGACAAGC 62.719 66.667 0.00 0.00 39.95 4.01
3905 8630 2.504244 GACGAGACCGCCGACAAG 60.504 66.667 0.00 0.00 39.95 3.16
3906 8631 4.047059 GGACGAGACCGCCGACAA 62.047 66.667 0.00 0.00 39.95 3.18
3914 8639 1.733399 GAAGCACACGGACGAGACC 60.733 63.158 0.00 0.00 0.00 3.85
3915 8640 1.733399 GGAAGCACACGGACGAGAC 60.733 63.158 0.00 0.00 0.00 3.36
3916 8641 2.649034 GGAAGCACACGGACGAGA 59.351 61.111 0.00 0.00 0.00 4.04
3917 8642 2.805353 CGGAAGCACACGGACGAG 60.805 66.667 0.00 0.00 0.00 4.18
3918 8643 3.289062 TCGGAAGCACACGGACGA 61.289 61.111 0.00 0.00 0.00 4.20


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.