Multiple sequence alignment - TraesCS2A01G561000

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G561000 chr2A 100.000 2434 0 0 1 2434 762973432 762975865 0.000000e+00 4495.0
1 TraesCS2A01G561000 chr2A 87.295 1039 87 24 756 1765 762697420 762698442 0.000000e+00 1146.0
2 TraesCS2A01G561000 chr2A 86.892 946 85 17 850 1765 762870776 762871712 0.000000e+00 1024.0
3 TraesCS2A01G561000 chr2A 94.462 650 32 4 1788 2434 766340601 766339953 0.000000e+00 998.0
4 TraesCS2A01G561000 chr2A 90.756 119 10 1 612 729 285635030 285634912 9.010000e-35 158.0
5 TraesCS2A01G561000 chr2A 91.743 109 7 2 748 855 762869561 762869668 1.510000e-32 150.0
6 TraesCS2A01G561000 chr2A 100.000 30 0 0 1759 1788 762975149 762975178 3.380000e-04 56.5
7 TraesCS2A01G561000 chr2A 100.000 30 0 0 1718 1747 762975190 762975219 3.380000e-04 56.5
8 TraesCS2A01G561000 chr2B 97.583 1200 28 1 590 1788 794581731 794580532 0.000000e+00 2054.0
9 TraesCS2A01G561000 chr2B 95.062 648 31 1 1788 2434 625160177 625160824 0.000000e+00 1018.0
10 TraesCS2A01G561000 chr2B 92.166 217 16 1 277 492 619035883 619035667 3.040000e-79 305.0
11 TraesCS2A01G561000 chr2B 91.705 217 17 1 277 492 83118512 83118296 1.410000e-77 300.0
12 TraesCS2A01G561000 chr2B 91.705 217 17 1 277 492 219367039 219367255 1.410000e-77 300.0
13 TraesCS2A01G561000 chr2B 89.916 119 10 2 612 729 323100675 323100558 4.190000e-33 152.0
14 TraesCS2A01G561000 chr2B 97.917 48 0 1 1718 1765 794580561 794580515 5.580000e-12 82.4
15 TraesCS2A01G561000 chr2B 100.000 30 0 0 1759 1788 794580602 794580573 3.380000e-04 56.5
16 TraesCS2A01G561000 chr2B 100.000 28 0 0 560 587 794581793 794581766 4.000000e-03 52.8
17 TraesCS2A01G561000 chr4B 95.679 648 25 2 1789 2434 573998372 573999018 0.000000e+00 1038.0
18 TraesCS2A01G561000 chr4B 94.436 647 35 1 1789 2434 547209652 547210298 0.000000e+00 994.0
19 TraesCS2A01G561000 chr4B 91.705 217 17 1 277 492 262300272 262300488 1.410000e-77 300.0
20 TraesCS2A01G561000 chr5D 95.054 647 30 2 1789 2434 188816171 188816816 0.000000e+00 1016.0
21 TraesCS2A01G561000 chr5D 88.235 119 13 1 612 729 507622032 507622150 9.070000e-30 141.0
22 TraesCS2A01G561000 chr5D 86.441 118 16 0 612 729 565312584 565312467 1.960000e-26 130.0
23 TraesCS2A01G561000 chr4D 94.793 653 31 2 1785 2434 110033165 110033817 0.000000e+00 1014.0
24 TraesCS2A01G561000 chr7A 94.915 649 30 2 1787 2433 35401956 35401309 0.000000e+00 1013.0
25 TraesCS2A01G561000 chr3B 94.745 647 33 1 1789 2434 8616932 8616286 0.000000e+00 1005.0
26 TraesCS2A01G561000 chr3B 91.705 217 17 1 277 492 304298718 304298934 1.410000e-77 300.0
27 TraesCS2A01G561000 chr3B 91.705 217 17 1 277 492 754537973 754537757 1.410000e-77 300.0
28 TraesCS2A01G561000 chr3B 86.842 114 15 0 616 729 751834104 751833991 7.060000e-26 128.0
29 TraesCS2A01G561000 chr6B 94.607 649 30 4 1788 2434 715855373 715856018 0.000000e+00 1000.0
30 TraesCS2A01G561000 chr6B 92.166 217 16 1 277 492 76922363 76922579 3.040000e-79 305.0
31 TraesCS2A01G561000 chr7B 92.166 217 16 1 277 492 493155866 493155650 3.040000e-79 305.0
32 TraesCS2A01G561000 chr1B 92.166 217 16 1 277 492 638863900 638863684 3.040000e-79 305.0
33 TraesCS2A01G561000 chr1B 87.395 119 14 1 612 729 565926270 565926152 4.220000e-28 135.0
34 TraesCS2A01G561000 chr2D 89.916 119 11 1 612 729 618867625 618867507 4.190000e-33 152.0
35 TraesCS2A01G561000 chr2D 88.136 118 14 0 612 729 139739819 139739936 9.070000e-30 141.0
36 TraesCS2A01G561000 chr2D 89.873 79 2 3 488 562 637132853 637132777 1.990000e-16 97.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G561000 chr2A 762973432 762975865 2433 False 1536.000 4495 100.0000 1 2434 3 chr2A.!!$F3 2433
1 TraesCS2A01G561000 chr2A 762697420 762698442 1022 False 1146.000 1146 87.2950 756 1765 1 chr2A.!!$F1 1009
2 TraesCS2A01G561000 chr2A 766339953 766340601 648 True 998.000 998 94.4620 1788 2434 1 chr2A.!!$R2 646
3 TraesCS2A01G561000 chr2A 762869561 762871712 2151 False 587.000 1024 89.3175 748 1765 2 chr2A.!!$F2 1017
4 TraesCS2A01G561000 chr2B 625160177 625160824 647 False 1018.000 1018 95.0620 1788 2434 1 chr2B.!!$F2 646
5 TraesCS2A01G561000 chr2B 794580515 794581793 1278 True 561.425 2054 98.8750 560 1788 4 chr2B.!!$R4 1228
6 TraesCS2A01G561000 chr4B 573998372 573999018 646 False 1038.000 1038 95.6790 1789 2434 1 chr4B.!!$F3 645
7 TraesCS2A01G561000 chr4B 547209652 547210298 646 False 994.000 994 94.4360 1789 2434 1 chr4B.!!$F2 645
8 TraesCS2A01G561000 chr5D 188816171 188816816 645 False 1016.000 1016 95.0540 1789 2434 1 chr5D.!!$F1 645
9 TraesCS2A01G561000 chr4D 110033165 110033817 652 False 1014.000 1014 94.7930 1785 2434 1 chr4D.!!$F1 649
10 TraesCS2A01G561000 chr7A 35401309 35401956 647 True 1013.000 1013 94.9150 1787 2433 1 chr7A.!!$R1 646
11 TraesCS2A01G561000 chr3B 8616286 8616932 646 True 1005.000 1005 94.7450 1789 2434 1 chr3B.!!$R1 645
12 TraesCS2A01G561000 chr6B 715855373 715856018 645 False 1000.000 1000 94.6070 1788 2434 1 chr6B.!!$F2 646

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
151 152 0.030638 CGTGGCAACTTTTGGTGGAG 59.969 55.0 0.0 0.0 37.67 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1811 2987 0.395173 TGGTCCTCGGATGATCGACA 60.395 55.0 0.0 0.0 35.18 4.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
43 44 7.950236 ACTCGTTATGAAATTTCTAGTCAACG 58.050 34.615 18.64 21.09 0.00 4.10
44 45 6.758149 TCGTTATGAAATTTCTAGTCAACGC 58.242 36.000 23.06 7.54 0.00 4.84
45 46 6.366604 TCGTTATGAAATTTCTAGTCAACGCA 59.633 34.615 23.06 15.76 0.00 5.24
46 47 7.012943 CGTTATGAAATTTCTAGTCAACGCAA 58.987 34.615 18.64 0.00 0.00 4.85
47 48 7.532546 CGTTATGAAATTTCTAGTCAACGCAAA 59.467 33.333 18.64 0.00 0.00 3.68
48 49 8.840867 GTTATGAAATTTCTAGTCAACGCAAAG 58.159 33.333 18.64 0.00 0.00 2.77
49 50 6.612247 TGAAATTTCTAGTCAACGCAAAGA 57.388 33.333 18.64 0.00 0.00 2.52
50 51 6.427150 TGAAATTTCTAGTCAACGCAAAGAC 58.573 36.000 18.64 0.00 35.02 3.01
51 52 6.037720 TGAAATTTCTAGTCAACGCAAAGACA 59.962 34.615 18.64 0.00 37.23 3.41
52 53 6.560253 AATTTCTAGTCAACGCAAAGACAT 57.440 33.333 0.00 0.00 37.23 3.06
53 54 7.667043 AATTTCTAGTCAACGCAAAGACATA 57.333 32.000 0.00 0.00 37.23 2.29
54 55 7.849804 ATTTCTAGTCAACGCAAAGACATAT 57.150 32.000 0.00 0.00 37.23 1.78
55 56 8.942338 ATTTCTAGTCAACGCAAAGACATATA 57.058 30.769 0.00 0.00 37.23 0.86
56 57 8.766000 TTTCTAGTCAACGCAAAGACATATAA 57.234 30.769 0.00 0.00 37.23 0.98
57 58 8.942338 TTCTAGTCAACGCAAAGACATATAAT 57.058 30.769 0.00 0.00 37.23 1.28
59 60 9.459640 TCTAGTCAACGCAAAGACATATAATAC 57.540 33.333 0.00 0.00 37.23 1.89
60 61 7.478520 AGTCAACGCAAAGACATATAATACC 57.521 36.000 0.00 0.00 37.23 2.73
61 62 7.272978 AGTCAACGCAAAGACATATAATACCT 58.727 34.615 0.00 0.00 37.23 3.08
62 63 7.769044 AGTCAACGCAAAGACATATAATACCTT 59.231 33.333 0.00 0.00 37.23 3.50
63 64 9.037737 GTCAACGCAAAGACATATAATACCTTA 57.962 33.333 0.00 0.00 34.93 2.69
64 65 9.037737 TCAACGCAAAGACATATAATACCTTAC 57.962 33.333 0.00 0.00 0.00 2.34
65 66 9.042008 CAACGCAAAGACATATAATACCTTACT 57.958 33.333 0.00 0.00 0.00 2.24
66 67 9.609346 AACGCAAAGACATATAATACCTTACTT 57.391 29.630 0.00 0.00 0.00 2.24
67 68 9.609346 ACGCAAAGACATATAATACCTTACTTT 57.391 29.630 0.00 0.00 0.00 2.66
84 85 9.349713 ACCTTACTTTCACTTTATGATTGTTCA 57.650 29.630 0.00 0.00 37.11 3.18
88 89 8.955061 ACTTTCACTTTATGATTGTTCATTCG 57.045 30.769 0.00 0.00 42.61 3.34
89 90 8.567948 ACTTTCACTTTATGATTGTTCATTCGT 58.432 29.630 0.00 0.00 42.61 3.85
90 91 8.726650 TTTCACTTTATGATTGTTCATTCGTG 57.273 30.769 0.00 1.17 42.61 4.35
91 92 7.665561 TCACTTTATGATTGTTCATTCGTGA 57.334 32.000 0.00 3.18 42.61 4.35
92 93 8.267620 TCACTTTATGATTGTTCATTCGTGAT 57.732 30.769 0.00 0.00 42.61 3.06
93 94 8.177013 TCACTTTATGATTGTTCATTCGTGATG 58.823 33.333 0.00 0.00 42.61 3.07
94 95 7.964559 CACTTTATGATTGTTCATTCGTGATGT 59.035 33.333 0.00 0.02 42.61 3.06
95 96 8.514594 ACTTTATGATTGTTCATTCGTGATGTT 58.485 29.630 0.00 0.00 42.61 2.71
96 97 9.345517 CTTTATGATTGTTCATTCGTGATGTTT 57.654 29.630 0.00 0.00 42.61 2.83
97 98 8.894409 TTATGATTGTTCATTCGTGATGTTTC 57.106 30.769 0.00 0.00 42.61 2.78
98 99 6.558771 TGATTGTTCATTCGTGATGTTTCT 57.441 33.333 2.43 0.00 37.06 2.52
99 100 6.602179 TGATTGTTCATTCGTGATGTTTCTC 58.398 36.000 2.43 0.00 37.06 2.87
100 101 6.427853 TGATTGTTCATTCGTGATGTTTCTCT 59.572 34.615 2.43 0.00 37.06 3.10
101 102 7.602265 TGATTGTTCATTCGTGATGTTTCTCTA 59.398 33.333 2.43 0.00 37.06 2.43
102 103 7.722795 TTGTTCATTCGTGATGTTTCTCTAA 57.277 32.000 2.43 0.00 37.06 2.10
103 104 7.117241 TGTTCATTCGTGATGTTTCTCTAAC 57.883 36.000 2.43 0.00 37.06 2.34
104 105 6.929049 TGTTCATTCGTGATGTTTCTCTAACT 59.071 34.615 0.00 0.00 37.64 2.24
105 106 7.441157 TGTTCATTCGTGATGTTTCTCTAACTT 59.559 33.333 0.00 0.00 37.64 2.66
106 107 7.351414 TCATTCGTGATGTTTCTCTAACTTG 57.649 36.000 0.00 0.00 37.64 3.16
107 108 6.929049 TCATTCGTGATGTTTCTCTAACTTGT 59.071 34.615 0.00 0.00 37.64 3.16
108 109 7.441157 TCATTCGTGATGTTTCTCTAACTTGTT 59.559 33.333 0.00 0.00 37.64 2.83
109 110 6.764877 TCGTGATGTTTCTCTAACTTGTTC 57.235 37.500 0.00 0.00 37.64 3.18
110 111 6.277605 TCGTGATGTTTCTCTAACTTGTTCA 58.722 36.000 0.00 0.00 37.64 3.18
111 112 6.929049 TCGTGATGTTTCTCTAACTTGTTCAT 59.071 34.615 0.00 0.00 37.64 2.57
112 113 7.011773 CGTGATGTTTCTCTAACTTGTTCATG 58.988 38.462 0.00 0.00 37.64 3.07
113 114 7.307396 CGTGATGTTTCTCTAACTTGTTCATGT 60.307 37.037 0.00 0.00 37.64 3.21
114 115 8.988934 GTGATGTTTCTCTAACTTGTTCATGTA 58.011 33.333 0.00 0.00 37.64 2.29
115 116 9.725019 TGATGTTTCTCTAACTTGTTCATGTAT 57.275 29.630 0.00 0.00 37.64 2.29
117 118 8.547967 TGTTTCTCTAACTTGTTCATGTATCC 57.452 34.615 0.00 0.00 37.64 2.59
118 119 7.330946 TGTTTCTCTAACTTGTTCATGTATCCG 59.669 37.037 0.00 0.00 37.64 4.18
119 120 6.525578 TCTCTAACTTGTTCATGTATCCGT 57.474 37.500 0.00 0.00 0.00 4.69
120 121 6.561614 TCTCTAACTTGTTCATGTATCCGTC 58.438 40.000 0.00 0.00 0.00 4.79
121 122 5.337554 TCTAACTTGTTCATGTATCCGTCG 58.662 41.667 0.00 0.00 0.00 5.12
122 123 3.861276 ACTTGTTCATGTATCCGTCGA 57.139 42.857 0.00 0.00 0.00 4.20
123 124 4.182693 ACTTGTTCATGTATCCGTCGAA 57.817 40.909 0.00 0.00 0.00 3.71
124 125 4.562082 ACTTGTTCATGTATCCGTCGAAA 58.438 39.130 0.00 0.00 0.00 3.46
125 126 4.387862 ACTTGTTCATGTATCCGTCGAAAC 59.612 41.667 0.00 0.00 0.00 2.78
126 127 4.182693 TGTTCATGTATCCGTCGAAACT 57.817 40.909 0.00 0.00 0.00 2.66
127 128 5.313520 TGTTCATGTATCCGTCGAAACTA 57.686 39.130 0.00 0.00 0.00 2.24
128 129 5.712004 TGTTCATGTATCCGTCGAAACTAA 58.288 37.500 0.00 0.00 0.00 2.24
129 130 6.334989 TGTTCATGTATCCGTCGAAACTAAT 58.665 36.000 0.00 0.00 0.00 1.73
130 131 6.814644 TGTTCATGTATCCGTCGAAACTAATT 59.185 34.615 0.00 0.00 0.00 1.40
131 132 7.009815 TGTTCATGTATCCGTCGAAACTAATTC 59.990 37.037 0.00 0.00 34.52 2.17
132 133 5.981315 TCATGTATCCGTCGAAACTAATTCC 59.019 40.000 0.00 0.00 34.34 3.01
133 134 4.353737 TGTATCCGTCGAAACTAATTCCG 58.646 43.478 0.00 0.00 34.34 4.30
134 135 3.515330 ATCCGTCGAAACTAATTCCGT 57.485 42.857 0.00 0.00 34.34 4.69
135 136 2.598589 TCCGTCGAAACTAATTCCGTG 58.401 47.619 0.00 0.00 34.34 4.94
136 137 1.657094 CCGTCGAAACTAATTCCGTGG 59.343 52.381 0.00 0.00 34.34 4.94
137 138 1.060122 CGTCGAAACTAATTCCGTGGC 59.940 52.381 0.00 0.00 34.34 5.01
138 139 2.070783 GTCGAAACTAATTCCGTGGCA 58.929 47.619 0.00 0.00 34.34 4.92
139 140 2.481185 GTCGAAACTAATTCCGTGGCAA 59.519 45.455 0.00 0.00 34.34 4.52
140 141 2.481185 TCGAAACTAATTCCGTGGCAAC 59.519 45.455 0.00 0.00 34.34 4.17
141 142 2.482721 CGAAACTAATTCCGTGGCAACT 59.517 45.455 0.00 0.00 34.34 3.16
142 143 3.058501 CGAAACTAATTCCGTGGCAACTT 60.059 43.478 0.00 0.00 34.34 2.66
143 144 4.555906 CGAAACTAATTCCGTGGCAACTTT 60.556 41.667 0.00 0.00 34.34 2.66
144 145 4.929819 AACTAATTCCGTGGCAACTTTT 57.070 36.364 0.00 0.00 37.61 2.27
145 146 4.237349 ACTAATTCCGTGGCAACTTTTG 57.763 40.909 0.00 0.00 37.61 2.44
146 147 2.524569 AATTCCGTGGCAACTTTTGG 57.475 45.000 0.00 0.00 37.61 3.28
147 148 1.408969 ATTCCGTGGCAACTTTTGGT 58.591 45.000 0.00 0.00 37.61 3.67
148 149 0.457851 TTCCGTGGCAACTTTTGGTG 59.542 50.000 0.00 0.00 40.87 4.17
149 150 1.067250 CCGTGGCAACTTTTGGTGG 59.933 57.895 0.00 0.00 37.67 4.61
150 151 1.388065 CCGTGGCAACTTTTGGTGGA 61.388 55.000 0.00 0.00 37.67 4.02
151 152 0.030638 CGTGGCAACTTTTGGTGGAG 59.969 55.000 0.00 0.00 37.67 3.86
152 153 1.398692 GTGGCAACTTTTGGTGGAGA 58.601 50.000 0.00 0.00 37.67 3.71
153 154 1.067060 GTGGCAACTTTTGGTGGAGAC 59.933 52.381 0.00 0.00 37.67 3.36
154 155 1.341482 TGGCAACTTTTGGTGGAGACA 60.341 47.619 0.00 0.00 37.67 3.41
155 156 1.963515 GGCAACTTTTGGTGGAGACAT 59.036 47.619 0.00 0.00 46.14 3.06
156 157 3.153919 GGCAACTTTTGGTGGAGACATA 58.846 45.455 0.00 0.00 46.14 2.29
157 158 3.763897 GGCAACTTTTGGTGGAGACATAT 59.236 43.478 0.00 0.00 46.14 1.78
158 159 4.142381 GGCAACTTTTGGTGGAGACATATC 60.142 45.833 0.00 0.00 46.14 1.63
159 160 4.702131 GCAACTTTTGGTGGAGACATATCT 59.298 41.667 0.00 0.00 46.14 1.98
160 161 5.392380 GCAACTTTTGGTGGAGACATATCTG 60.392 44.000 0.00 0.00 46.14 2.90
161 162 4.848357 ACTTTTGGTGGAGACATATCTGG 58.152 43.478 0.00 0.00 46.14 3.86
162 163 4.536090 ACTTTTGGTGGAGACATATCTGGA 59.464 41.667 0.00 0.00 46.14 3.86
163 164 5.192522 ACTTTTGGTGGAGACATATCTGGAT 59.807 40.000 0.00 0.00 46.14 3.41
164 165 6.386927 ACTTTTGGTGGAGACATATCTGGATA 59.613 38.462 0.00 0.00 46.14 2.59
165 166 6.823286 TTTGGTGGAGACATATCTGGATAA 57.177 37.500 0.00 0.00 46.14 1.75
166 167 6.823286 TTGGTGGAGACATATCTGGATAAA 57.177 37.500 0.00 0.00 46.14 1.40
167 168 6.823286 TGGTGGAGACATATCTGGATAAAA 57.177 37.500 0.00 0.00 46.14 1.52
168 169 7.392766 TGGTGGAGACATATCTGGATAAAAT 57.607 36.000 0.00 0.00 46.14 1.82
169 170 8.504811 TGGTGGAGACATATCTGGATAAAATA 57.495 34.615 0.00 0.00 46.14 1.40
170 171 8.944138 TGGTGGAGACATATCTGGATAAAATAA 58.056 33.333 0.00 0.00 46.14 1.40
171 172 9.793259 GGTGGAGACATATCTGGATAAAATAAA 57.207 33.333 0.00 0.00 46.14 1.40
204 205 9.869757 ACTTGTGGTATAGCAAAATTTATTTCC 57.130 29.630 7.96 0.00 0.00 3.13
224 225 7.759489 TTTCCTATGCTAATTGTTTCACTGT 57.241 32.000 0.00 0.00 0.00 3.55
225 226 7.759489 TTCCTATGCTAATTGTTTCACTGTT 57.241 32.000 0.00 0.00 0.00 3.16
226 227 7.759489 TCCTATGCTAATTGTTTCACTGTTT 57.241 32.000 0.00 0.00 0.00 2.83
227 228 8.177119 TCCTATGCTAATTGTTTCACTGTTTT 57.823 30.769 0.00 0.00 0.00 2.43
228 229 9.290988 TCCTATGCTAATTGTTTCACTGTTTTA 57.709 29.630 0.00 0.00 0.00 1.52
229 230 9.341899 CCTATGCTAATTGTTTCACTGTTTTAC 57.658 33.333 0.00 0.00 0.00 2.01
230 231 9.341899 CTATGCTAATTGTTTCACTGTTTTACC 57.658 33.333 0.00 0.00 0.00 2.85
231 232 6.508777 TGCTAATTGTTTCACTGTTTTACCC 58.491 36.000 0.00 0.00 0.00 3.69
232 233 6.322712 TGCTAATTGTTTCACTGTTTTACCCT 59.677 34.615 0.00 0.00 0.00 4.34
233 234 7.502895 TGCTAATTGTTTCACTGTTTTACCCTA 59.497 33.333 0.00 0.00 0.00 3.53
234 235 8.021396 GCTAATTGTTTCACTGTTTTACCCTAG 58.979 37.037 0.00 0.00 0.00 3.02
235 236 5.761165 TTGTTTCACTGTTTTACCCTAGC 57.239 39.130 0.00 0.00 0.00 3.42
236 237 4.783055 TGTTTCACTGTTTTACCCTAGCA 58.217 39.130 0.00 0.00 0.00 3.49
237 238 5.194432 TGTTTCACTGTTTTACCCTAGCAA 58.806 37.500 0.00 0.00 0.00 3.91
238 239 5.066764 TGTTTCACTGTTTTACCCTAGCAAC 59.933 40.000 0.00 0.00 0.00 4.17
239 240 3.746940 TCACTGTTTTACCCTAGCAACC 58.253 45.455 0.00 0.00 0.00 3.77
240 241 3.136809 TCACTGTTTTACCCTAGCAACCA 59.863 43.478 0.00 0.00 0.00 3.67
241 242 3.502211 CACTGTTTTACCCTAGCAACCAG 59.498 47.826 0.00 0.00 0.00 4.00
242 243 2.488153 CTGTTTTACCCTAGCAACCAGC 59.512 50.000 0.00 0.00 46.19 4.85
263 264 4.518249 GCCATGAGCTTTTCTACTTAGGT 58.482 43.478 0.00 0.00 38.99 3.08
264 265 4.333926 GCCATGAGCTTTTCTACTTAGGTG 59.666 45.833 0.00 0.00 38.99 4.00
265 266 5.491982 CCATGAGCTTTTCTACTTAGGTGT 58.508 41.667 0.00 0.00 0.00 4.16
266 267 5.352569 CCATGAGCTTTTCTACTTAGGTGTG 59.647 44.000 0.00 0.00 0.00 3.82
267 268 4.894784 TGAGCTTTTCTACTTAGGTGTGG 58.105 43.478 0.00 0.00 0.00 4.17
268 269 3.676093 AGCTTTTCTACTTAGGTGTGGC 58.324 45.455 0.00 0.00 0.00 5.01
269 270 3.072476 AGCTTTTCTACTTAGGTGTGGCA 59.928 43.478 0.00 0.00 0.00 4.92
270 271 4.010349 GCTTTTCTACTTAGGTGTGGCAT 58.990 43.478 0.00 0.00 0.00 4.40
271 272 4.459337 GCTTTTCTACTTAGGTGTGGCATT 59.541 41.667 0.00 0.00 0.00 3.56
272 273 5.646360 GCTTTTCTACTTAGGTGTGGCATTA 59.354 40.000 0.00 0.00 0.00 1.90
273 274 6.403309 GCTTTTCTACTTAGGTGTGGCATTAC 60.403 42.308 0.00 0.00 0.00 1.89
274 275 6.368779 TTTCTACTTAGGTGTGGCATTACT 57.631 37.500 0.00 0.00 0.00 2.24
275 276 5.593679 TCTACTTAGGTGTGGCATTACTC 57.406 43.478 0.00 0.00 0.00 2.59
276 277 5.269991 TCTACTTAGGTGTGGCATTACTCT 58.730 41.667 0.00 0.00 0.00 3.24
277 278 4.910458 ACTTAGGTGTGGCATTACTCTT 57.090 40.909 0.00 0.00 0.00 2.85
278 279 5.242795 ACTTAGGTGTGGCATTACTCTTT 57.757 39.130 0.00 0.00 0.00 2.52
279 280 5.246307 ACTTAGGTGTGGCATTACTCTTTC 58.754 41.667 0.00 0.00 0.00 2.62
280 281 5.013183 ACTTAGGTGTGGCATTACTCTTTCT 59.987 40.000 0.00 0.00 0.00 2.52
281 282 6.212791 ACTTAGGTGTGGCATTACTCTTTCTA 59.787 38.462 0.00 0.00 0.00 2.10
282 283 4.833390 AGGTGTGGCATTACTCTTTCTAC 58.167 43.478 0.00 0.00 0.00 2.59
283 284 3.939592 GGTGTGGCATTACTCTTTCTACC 59.060 47.826 0.00 0.00 0.00 3.18
284 285 3.617263 GTGTGGCATTACTCTTTCTACCG 59.383 47.826 0.00 0.00 0.00 4.02
285 286 3.259876 TGTGGCATTACTCTTTCTACCGT 59.740 43.478 0.00 0.00 0.00 4.83
286 287 3.864003 GTGGCATTACTCTTTCTACCGTC 59.136 47.826 0.00 0.00 0.00 4.79
287 288 3.767673 TGGCATTACTCTTTCTACCGTCT 59.232 43.478 0.00 0.00 0.00 4.18
288 289 4.951715 TGGCATTACTCTTTCTACCGTCTA 59.048 41.667 0.00 0.00 0.00 2.59
289 290 5.067413 TGGCATTACTCTTTCTACCGTCTAG 59.933 44.000 0.00 0.00 0.00 2.43
290 291 5.067544 GGCATTACTCTTTCTACCGTCTAGT 59.932 44.000 0.00 0.00 0.00 2.57
291 292 6.405619 GGCATTACTCTTTCTACCGTCTAGTT 60.406 42.308 0.00 0.00 0.00 2.24
292 293 7.034397 GCATTACTCTTTCTACCGTCTAGTTT 58.966 38.462 0.00 0.00 0.00 2.66
293 294 7.009357 GCATTACTCTTTCTACCGTCTAGTTTG 59.991 40.741 0.00 0.00 0.00 2.93
294 295 4.807443 ACTCTTTCTACCGTCTAGTTTGC 58.193 43.478 0.00 0.00 0.00 3.68
295 296 4.523558 ACTCTTTCTACCGTCTAGTTTGCT 59.476 41.667 0.00 0.00 0.00 3.91
296 297 4.806330 TCTTTCTACCGTCTAGTTTGCTG 58.194 43.478 0.00 0.00 0.00 4.41
297 298 4.521639 TCTTTCTACCGTCTAGTTTGCTGA 59.478 41.667 0.00 0.00 0.00 4.26
298 299 4.859304 TTCTACCGTCTAGTTTGCTGAA 57.141 40.909 0.00 0.00 0.00 3.02
299 300 4.436242 TCTACCGTCTAGTTTGCTGAAG 57.564 45.455 0.00 0.00 0.00 3.02
300 301 1.797025 ACCGTCTAGTTTGCTGAAGC 58.203 50.000 0.00 0.00 42.50 3.86
317 318 3.970410 CAGGTTGCAGGGGCCAGA 61.970 66.667 4.39 0.00 40.13 3.86
318 319 2.943265 AGGTTGCAGGGGCCAGAT 60.943 61.111 4.39 0.00 40.13 2.90
319 320 2.037847 GGTTGCAGGGGCCAGATT 59.962 61.111 4.39 0.00 40.13 2.40
320 321 1.610379 GGTTGCAGGGGCCAGATTT 60.610 57.895 4.39 0.00 40.13 2.17
321 322 1.607801 GGTTGCAGGGGCCAGATTTC 61.608 60.000 4.39 0.00 40.13 2.17
322 323 0.613012 GTTGCAGGGGCCAGATTTCT 60.613 55.000 4.39 0.00 40.13 2.52
323 324 0.998928 TTGCAGGGGCCAGATTTCTA 59.001 50.000 4.39 0.00 40.13 2.10
324 325 0.255890 TGCAGGGGCCAGATTTCTAC 59.744 55.000 4.39 0.00 40.13 2.59
325 326 0.548510 GCAGGGGCCAGATTTCTACT 59.451 55.000 4.39 0.00 0.00 2.57
326 327 1.748591 GCAGGGGCCAGATTTCTACTG 60.749 57.143 4.39 0.55 35.43 2.74
327 328 1.839994 CAGGGGCCAGATTTCTACTGA 59.160 52.381 4.39 0.00 37.54 3.41
328 329 1.840635 AGGGGCCAGATTTCTACTGAC 59.159 52.381 4.39 0.00 37.54 3.51
329 330 1.559682 GGGGCCAGATTTCTACTGACA 59.440 52.381 4.39 0.00 37.54 3.58
330 331 2.633488 GGGCCAGATTTCTACTGACAC 58.367 52.381 4.39 0.00 37.54 3.67
331 332 2.027192 GGGCCAGATTTCTACTGACACA 60.027 50.000 4.39 0.00 37.54 3.72
332 333 3.559171 GGGCCAGATTTCTACTGACACAA 60.559 47.826 4.39 0.00 37.54 3.33
333 334 4.072131 GGCCAGATTTCTACTGACACAAA 58.928 43.478 0.00 0.00 37.54 2.83
334 335 4.154918 GGCCAGATTTCTACTGACACAAAG 59.845 45.833 0.00 0.00 37.54 2.77
335 336 4.757149 GCCAGATTTCTACTGACACAAAGT 59.243 41.667 0.00 0.00 37.54 2.66
336 337 5.239525 GCCAGATTTCTACTGACACAAAGTT 59.760 40.000 0.00 0.00 37.54 2.66
337 338 6.426937 GCCAGATTTCTACTGACACAAAGTTA 59.573 38.462 0.00 0.00 37.54 2.24
338 339 7.041372 GCCAGATTTCTACTGACACAAAGTTAA 60.041 37.037 0.00 0.00 37.54 2.01
339 340 8.836413 CCAGATTTCTACTGACACAAAGTTAAA 58.164 33.333 0.00 0.00 37.54 1.52
340 341 9.651718 CAGATTTCTACTGACACAAAGTTAAAC 57.348 33.333 0.00 0.00 37.54 2.01
341 342 9.614792 AGATTTCTACTGACACAAAGTTAAACT 57.385 29.630 0.00 0.00 0.00 2.66
347 348 9.382244 CTACTGACACAAAGTTAAACTAAATGC 57.618 33.333 0.00 0.00 0.00 3.56
348 349 7.200455 ACTGACACAAAGTTAAACTAAATGCC 58.800 34.615 0.00 0.00 0.00 4.40
349 350 6.202937 TGACACAAAGTTAAACTAAATGCCG 58.797 36.000 0.00 0.00 0.00 5.69
350 351 6.139048 ACACAAAGTTAAACTAAATGCCGT 57.861 33.333 0.00 0.00 0.00 5.68
351 352 6.566141 ACACAAAGTTAAACTAAATGCCGTT 58.434 32.000 0.00 0.00 0.00 4.44
352 353 7.036829 ACACAAAGTTAAACTAAATGCCGTTT 58.963 30.769 0.00 0.00 37.19 3.60
353 354 7.546316 ACACAAAGTTAAACTAAATGCCGTTTT 59.454 29.630 0.00 0.00 35.25 2.43
354 355 8.384365 CACAAAGTTAAACTAAATGCCGTTTTT 58.616 29.630 0.00 0.00 35.25 1.94
355 356 9.583765 ACAAAGTTAAACTAAATGCCGTTTTTA 57.416 25.926 0.00 0.00 35.25 1.52
357 358 9.806203 AAAGTTAAACTAAATGCCGTTTTTAGT 57.194 25.926 8.15 8.15 46.58 2.24
362 363 6.870971 ACTAAATGCCGTTTTTAGTTCTGA 57.129 33.333 8.15 0.00 43.78 3.27
363 364 7.448748 ACTAAATGCCGTTTTTAGTTCTGAT 57.551 32.000 8.15 0.00 43.78 2.90
364 365 7.305474 ACTAAATGCCGTTTTTAGTTCTGATG 58.695 34.615 8.15 0.00 43.78 3.07
365 366 5.957842 AATGCCGTTTTTAGTTCTGATGA 57.042 34.783 0.00 0.00 0.00 2.92
366 367 6.515272 AATGCCGTTTTTAGTTCTGATGAT 57.485 33.333 0.00 0.00 0.00 2.45
367 368 5.295431 TGCCGTTTTTAGTTCTGATGATG 57.705 39.130 0.00 0.00 0.00 3.07
368 369 4.155826 TGCCGTTTTTAGTTCTGATGATGG 59.844 41.667 0.00 0.00 0.00 3.51
369 370 4.438744 GCCGTTTTTAGTTCTGATGATGGG 60.439 45.833 0.00 0.00 0.00 4.00
370 371 4.700213 CCGTTTTTAGTTCTGATGATGGGT 59.300 41.667 0.00 0.00 0.00 4.51
371 372 5.391950 CCGTTTTTAGTTCTGATGATGGGTG 60.392 44.000 0.00 0.00 0.00 4.61
372 373 5.391950 CGTTTTTAGTTCTGATGATGGGTGG 60.392 44.000 0.00 0.00 0.00 4.61
373 374 3.281727 TTAGTTCTGATGATGGGTGGC 57.718 47.619 0.00 0.00 0.00 5.01
374 375 0.994247 AGTTCTGATGATGGGTGGCA 59.006 50.000 0.00 0.00 0.00 4.92
375 376 1.064906 AGTTCTGATGATGGGTGGCAG 60.065 52.381 0.00 0.00 0.00 4.85
376 377 0.256752 TTCTGATGATGGGTGGCAGG 59.743 55.000 0.00 0.00 0.00 4.85
377 378 0.621280 TCTGATGATGGGTGGCAGGA 60.621 55.000 0.00 0.00 0.00 3.86
378 379 0.256752 CTGATGATGGGTGGCAGGAA 59.743 55.000 0.00 0.00 0.00 3.36
379 380 0.256752 TGATGATGGGTGGCAGGAAG 59.743 55.000 0.00 0.00 0.00 3.46
380 381 1.076485 ATGATGGGTGGCAGGAAGC 60.076 57.895 0.00 0.00 44.65 3.86
381 382 1.578215 ATGATGGGTGGCAGGAAGCT 61.578 55.000 0.00 0.00 44.79 3.74
382 383 1.751927 GATGGGTGGCAGGAAGCTG 60.752 63.158 0.00 0.00 44.79 4.24
392 393 1.888215 CAGGAAGCTGCACTTTGAGA 58.112 50.000 1.02 0.00 39.29 3.27
393 394 2.434428 CAGGAAGCTGCACTTTGAGAT 58.566 47.619 1.02 0.00 39.29 2.75
394 395 2.161808 CAGGAAGCTGCACTTTGAGATG 59.838 50.000 1.02 0.00 39.29 2.90
395 396 1.135460 GGAAGCTGCACTTTGAGATGC 60.135 52.381 1.02 0.00 39.29 3.91
399 400 1.871077 TGCACTTTGAGATGCAGCG 59.129 52.632 0.00 0.00 46.63 5.18
400 401 0.886043 TGCACTTTGAGATGCAGCGT 60.886 50.000 0.00 0.00 46.63 5.07
401 402 0.239347 GCACTTTGAGATGCAGCGTT 59.761 50.000 0.00 0.00 41.65 4.84
402 403 1.464608 GCACTTTGAGATGCAGCGTTA 59.535 47.619 0.00 0.00 41.65 3.18
403 404 2.096496 GCACTTTGAGATGCAGCGTTAT 59.904 45.455 0.00 0.00 41.65 1.89
404 405 3.309682 GCACTTTGAGATGCAGCGTTATA 59.690 43.478 0.00 0.00 41.65 0.98
405 406 4.783450 GCACTTTGAGATGCAGCGTTATAC 60.783 45.833 0.00 0.00 41.65 1.47
406 407 4.329801 CACTTTGAGATGCAGCGTTATACA 59.670 41.667 0.00 0.00 0.00 2.29
407 408 5.007039 CACTTTGAGATGCAGCGTTATACAT 59.993 40.000 0.00 0.00 0.00 2.29
408 409 5.586243 ACTTTGAGATGCAGCGTTATACATT 59.414 36.000 0.00 0.00 0.00 2.71
409 410 6.094048 ACTTTGAGATGCAGCGTTATACATTT 59.906 34.615 0.00 0.00 0.00 2.32
410 411 5.408204 TGAGATGCAGCGTTATACATTTG 57.592 39.130 0.00 0.00 0.00 2.32
411 412 5.115480 TGAGATGCAGCGTTATACATTTGA 58.885 37.500 0.00 0.00 0.00 2.69
412 413 5.234972 TGAGATGCAGCGTTATACATTTGAG 59.765 40.000 0.00 0.00 0.00 3.02
413 414 5.359756 AGATGCAGCGTTATACATTTGAGA 58.640 37.500 0.00 0.00 0.00 3.27
414 415 5.464722 AGATGCAGCGTTATACATTTGAGAG 59.535 40.000 0.00 0.00 0.00 3.20
415 416 4.503910 TGCAGCGTTATACATTTGAGAGT 58.496 39.130 0.00 0.00 0.00 3.24
416 417 4.935205 TGCAGCGTTATACATTTGAGAGTT 59.065 37.500 0.00 0.00 0.00 3.01
417 418 6.103330 TGCAGCGTTATACATTTGAGAGTTA 58.897 36.000 0.00 0.00 0.00 2.24
418 419 6.592220 TGCAGCGTTATACATTTGAGAGTTAA 59.408 34.615 0.00 0.00 0.00 2.01
419 420 7.279981 TGCAGCGTTATACATTTGAGAGTTAAT 59.720 33.333 0.00 0.00 0.00 1.40
420 421 8.122952 GCAGCGTTATACATTTGAGAGTTAATT 58.877 33.333 0.00 0.00 0.00 1.40
435 436 9.886132 TGAGAGTTAATTAGGATTAGTTTGGAC 57.114 33.333 0.00 0.00 0.00 4.02
436 437 9.886132 GAGAGTTAATTAGGATTAGTTTGGACA 57.114 33.333 0.00 0.00 0.00 4.02
442 443 7.573968 ATTAGGATTAGTTTGGACAATGAGC 57.426 36.000 0.00 0.00 0.00 4.26
443 444 4.922206 AGGATTAGTTTGGACAATGAGCA 58.078 39.130 0.00 0.00 0.00 4.26
444 445 4.946157 AGGATTAGTTTGGACAATGAGCAG 59.054 41.667 0.00 0.00 0.00 4.24
445 446 4.943705 GGATTAGTTTGGACAATGAGCAGA 59.056 41.667 0.00 0.00 0.00 4.26
446 447 5.065731 GGATTAGTTTGGACAATGAGCAGAG 59.934 44.000 0.00 0.00 0.00 3.35
447 448 2.157738 AGTTTGGACAATGAGCAGAGC 58.842 47.619 0.00 0.00 0.00 4.09
448 449 2.157738 GTTTGGACAATGAGCAGAGCT 58.842 47.619 0.00 0.00 43.88 4.09
449 450 2.555757 GTTTGGACAATGAGCAGAGCTT 59.444 45.455 0.00 0.00 39.88 3.74
450 451 3.701205 TTGGACAATGAGCAGAGCTTA 57.299 42.857 0.00 0.00 39.88 3.09
451 452 3.257469 TGGACAATGAGCAGAGCTTAG 57.743 47.619 0.00 0.00 39.88 2.18
452 453 1.939255 GGACAATGAGCAGAGCTTAGC 59.061 52.381 0.00 0.00 39.88 3.09
453 454 2.419851 GGACAATGAGCAGAGCTTAGCT 60.420 50.000 6.37 6.37 45.25 3.32
454 455 3.181471 GGACAATGAGCAGAGCTTAGCTA 60.181 47.826 6.75 0.00 42.04 3.32
455 456 4.437239 GACAATGAGCAGAGCTTAGCTAA 58.563 43.478 6.75 5.94 42.04 3.09
456 457 4.440880 ACAATGAGCAGAGCTTAGCTAAG 58.559 43.478 26.20 26.20 42.04 2.18
457 458 3.749665 ATGAGCAGAGCTTAGCTAAGG 57.250 47.619 29.93 16.87 42.04 2.69
458 459 2.739943 TGAGCAGAGCTTAGCTAAGGA 58.260 47.619 29.93 0.00 42.04 3.36
459 460 3.099905 TGAGCAGAGCTTAGCTAAGGAA 58.900 45.455 29.93 0.86 42.04 3.36
460 461 3.708631 TGAGCAGAGCTTAGCTAAGGAAT 59.291 43.478 29.93 9.62 42.04 3.01
461 462 4.057432 GAGCAGAGCTTAGCTAAGGAATG 58.943 47.826 29.93 10.04 42.04 2.67
462 463 3.454082 AGCAGAGCTTAGCTAAGGAATGT 59.546 43.478 29.93 4.64 39.88 2.71
463 464 4.080638 AGCAGAGCTTAGCTAAGGAATGTT 60.081 41.667 29.93 7.13 39.88 2.71
464 465 4.272261 GCAGAGCTTAGCTAAGGAATGTTC 59.728 45.833 29.93 14.90 39.88 3.18
465 466 5.669477 CAGAGCTTAGCTAAGGAATGTTCT 58.331 41.667 29.93 18.37 39.88 3.01
466 467 6.112058 CAGAGCTTAGCTAAGGAATGTTCTT 58.888 40.000 29.93 8.85 39.88 2.52
467 468 6.597280 CAGAGCTTAGCTAAGGAATGTTCTTT 59.403 38.462 29.93 12.36 39.88 2.52
468 469 7.766278 CAGAGCTTAGCTAAGGAATGTTCTTTA 59.234 37.037 29.93 0.00 39.88 1.85
469 470 8.490311 AGAGCTTAGCTAAGGAATGTTCTTTAT 58.510 33.333 29.93 8.39 39.88 1.40
470 471 9.114952 GAGCTTAGCTAAGGAATGTTCTTTATT 57.885 33.333 29.93 0.64 39.88 1.40
489 490 8.430063 TCTTTATTATTTAAGTATACGCGCTGC 58.570 33.333 5.73 0.00 0.00 5.25
490 491 7.878477 TTATTATTTAAGTATACGCGCTGCT 57.122 32.000 5.73 0.00 0.00 4.24
491 492 5.570262 TTATTTAAGTATACGCGCTGCTG 57.430 39.130 5.73 0.00 0.00 4.41
492 493 1.847818 TTAAGTATACGCGCTGCTGG 58.152 50.000 5.73 0.00 0.00 4.85
493 494 0.742505 TAAGTATACGCGCTGCTGGT 59.257 50.000 5.73 0.00 0.00 4.00
494 495 0.806102 AAGTATACGCGCTGCTGGTG 60.806 55.000 5.73 0.00 0.00 4.17
495 496 2.584970 TATACGCGCTGCTGGTGC 60.585 61.111 5.73 5.88 46.87 5.01
500 501 2.028043 GCGCTGCTGGTGCTTTTT 59.972 55.556 0.00 0.00 46.82 1.94
501 502 2.305127 GCGCTGCTGGTGCTTTTTG 61.305 57.895 0.00 0.00 46.82 2.44
502 503 1.359833 CGCTGCTGGTGCTTTTTGA 59.640 52.632 0.00 0.00 40.48 2.69
503 504 0.662374 CGCTGCTGGTGCTTTTTGAG 60.662 55.000 0.00 0.00 40.48 3.02
504 505 0.386838 GCTGCTGGTGCTTTTTGAGT 59.613 50.000 0.00 0.00 40.48 3.41
505 506 1.866880 GCTGCTGGTGCTTTTTGAGTG 60.867 52.381 0.00 0.00 40.48 3.51
506 507 1.677576 CTGCTGGTGCTTTTTGAGTGA 59.322 47.619 0.00 0.00 40.48 3.41
507 508 2.295349 CTGCTGGTGCTTTTTGAGTGAT 59.705 45.455 0.00 0.00 40.48 3.06
508 509 2.694628 TGCTGGTGCTTTTTGAGTGATT 59.305 40.909 0.00 0.00 40.48 2.57
509 510 3.132646 TGCTGGTGCTTTTTGAGTGATTT 59.867 39.130 0.00 0.00 40.48 2.17
510 511 3.492011 GCTGGTGCTTTTTGAGTGATTTG 59.508 43.478 0.00 0.00 36.03 2.32
511 512 4.737352 GCTGGTGCTTTTTGAGTGATTTGA 60.737 41.667 0.00 0.00 36.03 2.69
512 513 4.935702 TGGTGCTTTTTGAGTGATTTGAG 58.064 39.130 0.00 0.00 0.00 3.02
513 514 4.644234 TGGTGCTTTTTGAGTGATTTGAGA 59.356 37.500 0.00 0.00 0.00 3.27
514 515 5.218139 GGTGCTTTTTGAGTGATTTGAGAG 58.782 41.667 0.00 0.00 0.00 3.20
515 516 4.678742 GTGCTTTTTGAGTGATTTGAGAGC 59.321 41.667 0.00 0.00 0.00 4.09
516 517 4.233005 GCTTTTTGAGTGATTTGAGAGCC 58.767 43.478 0.00 0.00 0.00 4.70
517 518 4.022503 GCTTTTTGAGTGATTTGAGAGCCT 60.023 41.667 0.00 0.00 0.00 4.58
518 519 5.443185 TTTTTGAGTGATTTGAGAGCCTG 57.557 39.130 0.00 0.00 0.00 4.85
519 520 4.356405 TTTGAGTGATTTGAGAGCCTGA 57.644 40.909 0.00 0.00 0.00 3.86
520 521 4.356405 TTGAGTGATTTGAGAGCCTGAA 57.644 40.909 0.00 0.00 0.00 3.02
521 522 3.935315 TGAGTGATTTGAGAGCCTGAAG 58.065 45.455 0.00 0.00 0.00 3.02
522 523 2.677337 GAGTGATTTGAGAGCCTGAAGC 59.323 50.000 0.00 0.00 44.25 3.86
523 524 1.742268 GTGATTTGAGAGCCTGAAGCC 59.258 52.381 0.00 0.00 45.47 4.35
524 525 1.012841 GATTTGAGAGCCTGAAGCCG 58.987 55.000 0.00 0.00 45.47 5.52
525 526 0.393537 ATTTGAGAGCCTGAAGCCGG 60.394 55.000 0.00 0.00 45.47 6.13
531 532 2.269241 GCCTGAAGCCGGCTTACT 59.731 61.111 40.30 21.48 44.17 2.24
532 533 2.109126 GCCTGAAGCCGGCTTACTG 61.109 63.158 40.30 30.68 44.17 2.74
533 534 2.109126 CCTGAAGCCGGCTTACTGC 61.109 63.158 40.30 27.53 36.26 4.40
534 535 1.375908 CTGAAGCCGGCTTACTGCA 60.376 57.895 40.30 30.34 45.15 4.41
535 536 1.639298 CTGAAGCCGGCTTACTGCAC 61.639 60.000 40.30 26.44 45.15 4.57
536 537 1.376037 GAAGCCGGCTTACTGCACT 60.376 57.895 40.30 18.01 45.15 4.40
537 538 0.955919 GAAGCCGGCTTACTGCACTT 60.956 55.000 40.30 17.16 45.15 3.16
538 539 0.537371 AAGCCGGCTTACTGCACTTT 60.537 50.000 39.65 12.55 45.15 2.66
539 540 0.537371 AGCCGGCTTACTGCACTTTT 60.537 50.000 27.08 0.00 45.15 2.27
540 541 0.313987 GCCGGCTTACTGCACTTTTT 59.686 50.000 22.15 0.00 45.15 1.94
600 633 2.610219 TTGATGCAAATTCACGGTCG 57.390 45.000 0.00 0.00 0.00 4.79
644 677 1.550524 TCTCGACCCAGATGGAAACTG 59.449 52.381 0.00 0.00 36.36 3.16
657 690 7.148255 CCAGATGGAAACTGTTTCGATATTCAA 60.148 37.037 24.43 6.80 38.07 2.69
679 712 2.365948 CAAATGAATCGAACGGCATCG 58.634 47.619 3.51 3.51 44.04 3.84
684 717 2.959372 TCGAACGGCATCGACTGT 59.041 55.556 8.14 0.00 46.12 3.55
688 721 0.944311 GAACGGCATCGACTGTGTGT 60.944 55.000 0.00 0.00 40.11 3.72
742 775 7.546667 GGGCGTTATCATTCGTCCTATATTTAA 59.453 37.037 0.93 0.00 46.47 1.52
881 2025 6.568462 GCATTGCCGCATTTAATGAGTAGTAT 60.568 38.462 9.36 0.00 34.55 2.12
964 2108 6.825721 CCCCTATATGATATCTTTGTTGGAGC 59.174 42.308 3.98 0.00 0.00 4.70
1074 2219 3.268330 TCACAAGATGCAGATGAGAAGC 58.732 45.455 0.00 0.00 0.00 3.86
1135 2280 4.803098 AGTTCTACTCACGCAGGTTATT 57.197 40.909 0.00 0.00 0.00 1.40
1392 2552 6.401394 TGCTATGTATGCCATGATTAGACTC 58.599 40.000 0.00 0.00 34.86 3.36
1503 2663 4.991776 TCCATGTCCACCTTGTTTATTGA 58.008 39.130 0.00 0.00 0.00 2.57
1520 2683 9.997482 TGTTTATTGAAATAATTCTTCCGCTAC 57.003 29.630 0.00 0.00 36.48 3.58
1536 2699 4.634004 TCCGCTACTAATGTTGAATTGTGG 59.366 41.667 0.00 0.00 0.00 4.17
1556 2719 2.616256 GGGACTCTGTTCATGTGCATCA 60.616 50.000 0.00 0.00 0.00 3.07
1811 2987 5.531287 GTGTTAGAATAAATCCGAGGCCATT 59.469 40.000 5.01 0.00 0.00 3.16
2024 3201 1.948104 TGGCATAGGTTACATCGTGC 58.052 50.000 0.00 0.00 0.00 5.34
2050 3227 2.315155 ACCCCCGCTATATATGAGAGGT 59.685 50.000 0.00 0.00 32.37 3.85
2274 3453 1.338200 CCGCTGCTACTCCAAAGACTT 60.338 52.381 0.00 0.00 0.00 3.01
2380 3559 1.691196 CTTGTGCTCCCAACTTCCAA 58.309 50.000 0.00 0.00 0.00 3.53
2396 3575 1.894466 TCCAAAGTATCCGTCCAACGA 59.106 47.619 0.24 0.00 46.05 3.85
2415 3594 3.506067 ACGACATCACACACTGATCACTA 59.494 43.478 0.00 0.00 37.53 2.74
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 9.069078 CGTTGACTAGAAATTTCATAACGAGTA 57.931 33.333 24.52 8.53 40.28 2.59
18 19 7.411588 GCGTTGACTAGAAATTTCATAACGAGT 60.412 37.037 28.55 18.80 40.28 4.18
19 20 6.895040 GCGTTGACTAGAAATTTCATAACGAG 59.105 38.462 28.55 16.81 40.28 4.18
20 21 6.366604 TGCGTTGACTAGAAATTTCATAACGA 59.633 34.615 28.55 19.04 40.28 3.85
21 22 6.530567 TGCGTTGACTAGAAATTTCATAACG 58.469 36.000 24.49 24.49 40.66 3.18
22 23 8.722342 TTTGCGTTGACTAGAAATTTCATAAC 57.278 30.769 19.99 14.15 0.00 1.89
23 24 8.779303 TCTTTGCGTTGACTAGAAATTTCATAA 58.221 29.630 19.99 4.58 0.00 1.90
24 25 8.227791 GTCTTTGCGTTGACTAGAAATTTCATA 58.772 33.333 19.99 8.62 0.00 2.15
25 26 7.078228 GTCTTTGCGTTGACTAGAAATTTCAT 58.922 34.615 19.99 5.23 0.00 2.57
26 27 6.037720 TGTCTTTGCGTTGACTAGAAATTTCA 59.962 34.615 19.99 5.68 34.57 2.69
27 28 6.427150 TGTCTTTGCGTTGACTAGAAATTTC 58.573 36.000 10.33 10.33 34.57 2.17
28 29 6.371809 TGTCTTTGCGTTGACTAGAAATTT 57.628 33.333 0.00 0.00 34.57 1.82
29 30 6.560253 ATGTCTTTGCGTTGACTAGAAATT 57.440 33.333 0.00 0.00 34.57 1.82
30 31 7.849804 ATATGTCTTTGCGTTGACTAGAAAT 57.150 32.000 0.00 0.00 34.57 2.17
31 32 8.766000 TTATATGTCTTTGCGTTGACTAGAAA 57.234 30.769 0.00 0.00 34.57 2.52
32 33 8.942338 ATTATATGTCTTTGCGTTGACTAGAA 57.058 30.769 0.00 0.00 34.57 2.10
33 34 9.459640 GTATTATATGTCTTTGCGTTGACTAGA 57.540 33.333 0.00 0.00 34.57 2.43
34 35 8.700644 GGTATTATATGTCTTTGCGTTGACTAG 58.299 37.037 0.00 0.00 34.57 2.57
35 36 8.418662 AGGTATTATATGTCTTTGCGTTGACTA 58.581 33.333 0.00 0.00 34.57 2.59
36 37 7.272978 AGGTATTATATGTCTTTGCGTTGACT 58.727 34.615 0.00 0.00 34.57 3.41
37 38 7.478520 AGGTATTATATGTCTTTGCGTTGAC 57.521 36.000 0.00 0.00 0.00 3.18
38 39 9.037737 GTAAGGTATTATATGTCTTTGCGTTGA 57.962 33.333 0.00 0.00 0.00 3.18
39 40 9.042008 AGTAAGGTATTATATGTCTTTGCGTTG 57.958 33.333 0.00 0.00 0.00 4.10
40 41 9.609346 AAGTAAGGTATTATATGTCTTTGCGTT 57.391 29.630 0.00 0.00 0.00 4.84
41 42 9.609346 AAAGTAAGGTATTATATGTCTTTGCGT 57.391 29.630 0.00 0.00 0.00 5.24
58 59 9.349713 TGAACAATCATAAAGTGAAAGTAAGGT 57.650 29.630 0.00 0.00 40.97 3.50
63 64 8.567948 ACGAATGAACAATCATAAAGTGAAAGT 58.432 29.630 0.00 0.00 45.60 2.66
64 65 8.843733 CACGAATGAACAATCATAAAGTGAAAG 58.156 33.333 12.04 0.00 45.60 2.62
65 66 8.563732 TCACGAATGAACAATCATAAAGTGAAA 58.436 29.630 15.20 2.57 45.60 2.69
66 67 8.093659 TCACGAATGAACAATCATAAAGTGAA 57.906 30.769 15.20 5.91 45.60 3.18
67 68 7.665561 TCACGAATGAACAATCATAAAGTGA 57.334 32.000 14.30 14.30 45.60 3.41
68 69 7.964559 ACATCACGAATGAACAATCATAAAGTG 59.035 33.333 9.06 11.55 45.60 3.16
69 70 8.044060 ACATCACGAATGAACAATCATAAAGT 57.956 30.769 9.06 0.00 45.60 2.66
70 71 8.900511 AACATCACGAATGAACAATCATAAAG 57.099 30.769 9.06 0.00 45.60 1.85
71 72 9.340695 GAAACATCACGAATGAACAATCATAAA 57.659 29.630 9.06 0.00 45.60 1.40
72 73 8.729756 AGAAACATCACGAATGAACAATCATAA 58.270 29.630 9.06 0.00 45.60 1.90
73 74 8.267620 AGAAACATCACGAATGAACAATCATA 57.732 30.769 9.06 0.00 45.60 2.15
75 76 6.427853 AGAGAAACATCACGAATGAACAATCA 59.572 34.615 9.06 0.00 38.69 2.57
76 77 6.835914 AGAGAAACATCACGAATGAACAATC 58.164 36.000 9.06 0.00 38.69 2.67
77 78 6.808008 AGAGAAACATCACGAATGAACAAT 57.192 33.333 9.06 0.00 38.69 2.71
78 79 7.441157 AGTTAGAGAAACATCACGAATGAACAA 59.559 33.333 9.06 0.00 40.83 2.83
79 80 6.929049 AGTTAGAGAAACATCACGAATGAACA 59.071 34.615 9.06 0.00 40.83 3.18
80 81 7.352719 AGTTAGAGAAACATCACGAATGAAC 57.647 36.000 9.06 2.70 40.83 3.18
81 82 7.441157 ACAAGTTAGAGAAACATCACGAATGAA 59.559 33.333 9.06 0.00 40.83 2.57
82 83 6.929049 ACAAGTTAGAGAAACATCACGAATGA 59.071 34.615 9.06 0.00 40.83 2.57
83 84 7.121974 ACAAGTTAGAGAAACATCACGAATG 57.878 36.000 0.00 0.00 40.83 2.67
84 85 7.441157 TGAACAAGTTAGAGAAACATCACGAAT 59.559 33.333 0.00 0.00 40.83 3.34
85 86 6.759356 TGAACAAGTTAGAGAAACATCACGAA 59.241 34.615 0.00 0.00 40.83 3.85
86 87 6.277605 TGAACAAGTTAGAGAAACATCACGA 58.722 36.000 0.00 0.00 40.83 4.35
87 88 6.525121 TGAACAAGTTAGAGAAACATCACG 57.475 37.500 0.00 0.00 40.83 4.35
88 89 7.865707 ACATGAACAAGTTAGAGAAACATCAC 58.134 34.615 0.00 0.00 40.83 3.06
89 90 9.725019 ATACATGAACAAGTTAGAGAAACATCA 57.275 29.630 0.00 0.00 40.83 3.07
91 92 9.167311 GGATACATGAACAAGTTAGAGAAACAT 57.833 33.333 0.00 0.00 40.83 2.71
92 93 7.330946 CGGATACATGAACAAGTTAGAGAAACA 59.669 37.037 0.00 0.00 40.83 2.83
93 94 7.331193 ACGGATACATGAACAAGTTAGAGAAAC 59.669 37.037 0.00 0.00 38.46 2.78
94 95 7.383687 ACGGATACATGAACAAGTTAGAGAAA 58.616 34.615 0.00 0.00 0.00 2.52
95 96 6.931838 ACGGATACATGAACAAGTTAGAGAA 58.068 36.000 0.00 0.00 0.00 2.87
96 97 6.525578 ACGGATACATGAACAAGTTAGAGA 57.474 37.500 0.00 0.00 0.00 3.10
97 98 5.455849 CGACGGATACATGAACAAGTTAGAG 59.544 44.000 0.00 0.00 0.00 2.43
98 99 5.124297 TCGACGGATACATGAACAAGTTAGA 59.876 40.000 0.00 0.00 0.00 2.10
99 100 5.337554 TCGACGGATACATGAACAAGTTAG 58.662 41.667 0.00 0.00 0.00 2.34
100 101 5.313520 TCGACGGATACATGAACAAGTTA 57.686 39.130 0.00 0.00 0.00 2.24
101 102 4.182693 TCGACGGATACATGAACAAGTT 57.817 40.909 0.00 0.00 0.00 2.66
102 103 3.861276 TCGACGGATACATGAACAAGT 57.139 42.857 0.00 0.00 0.00 3.16
103 104 4.625742 AGTTTCGACGGATACATGAACAAG 59.374 41.667 0.00 0.00 0.00 3.16
104 105 4.562082 AGTTTCGACGGATACATGAACAA 58.438 39.130 0.00 0.00 0.00 2.83
105 106 4.182693 AGTTTCGACGGATACATGAACA 57.817 40.909 0.00 0.00 0.00 3.18
106 107 6.823678 ATTAGTTTCGACGGATACATGAAC 57.176 37.500 0.00 0.00 0.00 3.18
107 108 6.477688 GGAATTAGTTTCGACGGATACATGAA 59.522 38.462 0.00 0.00 34.98 2.57
108 109 5.981315 GGAATTAGTTTCGACGGATACATGA 59.019 40.000 0.00 0.00 34.98 3.07
109 110 5.107989 CGGAATTAGTTTCGACGGATACATG 60.108 44.000 0.00 0.00 38.66 3.21
110 111 4.980434 CGGAATTAGTTTCGACGGATACAT 59.020 41.667 0.00 0.00 38.66 2.29
111 112 4.142403 ACGGAATTAGTTTCGACGGATACA 60.142 41.667 5.57 0.00 38.66 2.29
112 113 4.205792 CACGGAATTAGTTTCGACGGATAC 59.794 45.833 5.57 0.00 38.66 2.24
113 114 4.353737 CACGGAATTAGTTTCGACGGATA 58.646 43.478 5.57 0.00 38.66 2.59
114 115 3.184541 CACGGAATTAGTTTCGACGGAT 58.815 45.455 5.57 0.00 38.66 4.18
115 116 2.598589 CACGGAATTAGTTTCGACGGA 58.401 47.619 5.57 0.00 38.66 4.69
116 117 1.657094 CCACGGAATTAGTTTCGACGG 59.343 52.381 5.57 1.94 38.66 4.79
117 118 1.060122 GCCACGGAATTAGTTTCGACG 59.940 52.381 5.57 0.00 38.66 5.12
118 119 2.070783 TGCCACGGAATTAGTTTCGAC 58.929 47.619 5.57 0.00 38.66 4.20
119 120 2.459060 TGCCACGGAATTAGTTTCGA 57.541 45.000 5.57 0.00 38.66 3.71
120 121 2.482721 AGTTGCCACGGAATTAGTTTCG 59.517 45.455 0.00 0.00 42.15 3.46
121 122 4.499037 AAGTTGCCACGGAATTAGTTTC 57.501 40.909 0.00 0.00 0.00 2.78
122 123 4.929819 AAAGTTGCCACGGAATTAGTTT 57.070 36.364 0.00 0.00 0.00 2.66
123 124 4.500716 CCAAAAGTTGCCACGGAATTAGTT 60.501 41.667 0.00 0.00 0.00 2.24
124 125 3.005367 CCAAAAGTTGCCACGGAATTAGT 59.995 43.478 0.00 0.00 0.00 2.24
125 126 3.005367 ACCAAAAGTTGCCACGGAATTAG 59.995 43.478 0.00 0.00 0.00 1.73
126 127 2.959707 ACCAAAAGTTGCCACGGAATTA 59.040 40.909 0.00 0.00 0.00 1.40
127 128 1.760029 ACCAAAAGTTGCCACGGAATT 59.240 42.857 0.00 0.00 0.00 2.17
128 129 1.068434 CACCAAAAGTTGCCACGGAAT 59.932 47.619 0.00 0.00 0.00 3.01
129 130 0.457851 CACCAAAAGTTGCCACGGAA 59.542 50.000 0.00 0.00 0.00 4.30
130 131 1.388065 CCACCAAAAGTTGCCACGGA 61.388 55.000 0.00 0.00 0.00 4.69
131 132 1.067250 CCACCAAAAGTTGCCACGG 59.933 57.895 0.00 0.00 0.00 4.94
132 133 0.030638 CTCCACCAAAAGTTGCCACG 59.969 55.000 0.00 0.00 0.00 4.94
133 134 1.067060 GTCTCCACCAAAAGTTGCCAC 59.933 52.381 0.00 0.00 0.00 5.01
134 135 1.341482 TGTCTCCACCAAAAGTTGCCA 60.341 47.619 0.00 0.00 0.00 4.92
135 136 1.398692 TGTCTCCACCAAAAGTTGCC 58.601 50.000 0.00 0.00 0.00 4.52
136 137 4.702131 AGATATGTCTCCACCAAAAGTTGC 59.298 41.667 0.00 0.00 0.00 4.17
137 138 5.124457 CCAGATATGTCTCCACCAAAAGTTG 59.876 44.000 0.00 0.00 30.42 3.16
138 139 5.014123 TCCAGATATGTCTCCACCAAAAGTT 59.986 40.000 0.00 0.00 30.42 2.66
139 140 4.536090 TCCAGATATGTCTCCACCAAAAGT 59.464 41.667 0.00 0.00 30.42 2.66
140 141 5.102953 TCCAGATATGTCTCCACCAAAAG 57.897 43.478 0.00 0.00 30.42 2.27
141 142 5.715439 ATCCAGATATGTCTCCACCAAAA 57.285 39.130 0.00 0.00 30.42 2.44
142 143 6.823286 TTATCCAGATATGTCTCCACCAAA 57.177 37.500 0.00 0.00 30.42 3.28
143 144 6.823286 TTTATCCAGATATGTCTCCACCAA 57.177 37.500 0.00 0.00 30.42 3.67
144 145 6.823286 TTTTATCCAGATATGTCTCCACCA 57.177 37.500 0.00 0.00 30.42 4.17
145 146 9.793259 TTTATTTTATCCAGATATGTCTCCACC 57.207 33.333 0.00 0.00 30.42 4.61
178 179 9.869757 GGAAATAAATTTTGCTATACCACAAGT 57.130 29.630 0.00 0.00 0.00 3.16
198 199 9.461312 ACAGTGAAACAATTAGCATAGGAAATA 57.539 29.630 0.00 0.00 41.43 1.40
199 200 8.353423 ACAGTGAAACAATTAGCATAGGAAAT 57.647 30.769 0.00 0.00 41.43 2.17
200 201 7.759489 ACAGTGAAACAATTAGCATAGGAAA 57.241 32.000 0.00 0.00 41.43 3.13
201 202 7.759489 AACAGTGAAACAATTAGCATAGGAA 57.241 32.000 0.00 0.00 41.43 3.36
202 203 7.759489 AAACAGTGAAACAATTAGCATAGGA 57.241 32.000 0.00 0.00 41.43 2.94
203 204 9.341899 GTAAAACAGTGAAACAATTAGCATAGG 57.658 33.333 0.00 0.00 41.43 2.57
204 205 9.341899 GGTAAAACAGTGAAACAATTAGCATAG 57.658 33.333 0.00 0.00 41.43 2.23
205 206 8.301002 GGGTAAAACAGTGAAACAATTAGCATA 58.699 33.333 0.00 0.00 41.43 3.14
206 207 7.015195 AGGGTAAAACAGTGAAACAATTAGCAT 59.985 33.333 0.00 0.00 41.43 3.79
207 208 6.322712 AGGGTAAAACAGTGAAACAATTAGCA 59.677 34.615 0.00 0.00 41.43 3.49
208 209 6.745116 AGGGTAAAACAGTGAAACAATTAGC 58.255 36.000 0.00 0.00 41.43 3.09
209 210 8.021396 GCTAGGGTAAAACAGTGAAACAATTAG 58.979 37.037 0.00 0.00 41.43 1.73
210 211 7.502895 TGCTAGGGTAAAACAGTGAAACAATTA 59.497 33.333 0.00 0.00 41.43 1.40
211 212 6.322712 TGCTAGGGTAAAACAGTGAAACAATT 59.677 34.615 0.00 0.00 41.43 2.32
212 213 5.830991 TGCTAGGGTAAAACAGTGAAACAAT 59.169 36.000 0.00 0.00 41.43 2.71
213 214 5.194432 TGCTAGGGTAAAACAGTGAAACAA 58.806 37.500 0.00 0.00 41.43 2.83
214 215 4.783055 TGCTAGGGTAAAACAGTGAAACA 58.217 39.130 0.00 0.00 41.43 2.83
215 216 5.506815 GGTTGCTAGGGTAAAACAGTGAAAC 60.507 44.000 0.00 0.00 0.00 2.78
216 217 4.581409 GGTTGCTAGGGTAAAACAGTGAAA 59.419 41.667 0.00 0.00 0.00 2.69
217 218 4.139038 GGTTGCTAGGGTAAAACAGTGAA 58.861 43.478 0.00 0.00 0.00 3.18
218 219 3.136809 TGGTTGCTAGGGTAAAACAGTGA 59.863 43.478 0.00 0.00 0.00 3.41
219 220 3.482436 TGGTTGCTAGGGTAAAACAGTG 58.518 45.455 0.00 0.00 0.00 3.66
220 221 3.751518 CTGGTTGCTAGGGTAAAACAGT 58.248 45.455 0.00 0.00 0.00 3.55
221 222 2.488153 GCTGGTTGCTAGGGTAAAACAG 59.512 50.000 0.00 0.00 38.95 3.16
222 223 2.510613 GCTGGTTGCTAGGGTAAAACA 58.489 47.619 0.00 0.00 38.95 2.83
223 224 1.816835 GGCTGGTTGCTAGGGTAAAAC 59.183 52.381 0.00 0.00 42.39 2.43
224 225 1.425831 TGGCTGGTTGCTAGGGTAAAA 59.574 47.619 0.00 0.00 42.39 1.52
225 226 1.068948 TGGCTGGTTGCTAGGGTAAA 58.931 50.000 0.00 0.00 42.39 2.01
226 227 1.064758 CATGGCTGGTTGCTAGGGTAA 60.065 52.381 0.00 0.00 42.39 2.85
227 228 0.546122 CATGGCTGGTTGCTAGGGTA 59.454 55.000 0.00 0.00 42.39 3.69
228 229 1.207488 TCATGGCTGGTTGCTAGGGT 61.207 55.000 0.00 0.00 42.39 4.34
229 230 0.465097 CTCATGGCTGGTTGCTAGGG 60.465 60.000 0.00 0.00 42.39 3.53
230 231 1.099879 GCTCATGGCTGGTTGCTAGG 61.100 60.000 0.00 0.00 42.39 3.02
231 232 2.401967 GCTCATGGCTGGTTGCTAG 58.598 57.895 0.00 0.00 42.39 3.42
232 233 4.643795 GCTCATGGCTGGTTGCTA 57.356 55.556 0.00 0.00 42.39 3.49
241 242 4.333926 CACCTAAGTAGAAAAGCTCATGGC 59.666 45.833 0.00 0.00 42.19 4.40
242 243 5.352569 CACACCTAAGTAGAAAAGCTCATGG 59.647 44.000 0.00 0.00 0.00 3.66
243 244 5.352569 CCACACCTAAGTAGAAAAGCTCATG 59.647 44.000 0.00 0.00 0.00 3.07
244 245 5.491982 CCACACCTAAGTAGAAAAGCTCAT 58.508 41.667 0.00 0.00 0.00 2.90
245 246 4.802918 GCCACACCTAAGTAGAAAAGCTCA 60.803 45.833 0.00 0.00 0.00 4.26
246 247 3.685272 GCCACACCTAAGTAGAAAAGCTC 59.315 47.826 0.00 0.00 0.00 4.09
247 248 3.072476 TGCCACACCTAAGTAGAAAAGCT 59.928 43.478 0.00 0.00 0.00 3.74
248 249 3.408634 TGCCACACCTAAGTAGAAAAGC 58.591 45.455 0.00 0.00 0.00 3.51
249 250 6.879458 AGTAATGCCACACCTAAGTAGAAAAG 59.121 38.462 0.00 0.00 0.00 2.27
250 251 6.775708 AGTAATGCCACACCTAAGTAGAAAA 58.224 36.000 0.00 0.00 0.00 2.29
251 252 6.212791 AGAGTAATGCCACACCTAAGTAGAAA 59.787 38.462 0.00 0.00 0.00 2.52
252 253 5.720041 AGAGTAATGCCACACCTAAGTAGAA 59.280 40.000 0.00 0.00 0.00 2.10
253 254 5.269991 AGAGTAATGCCACACCTAAGTAGA 58.730 41.667 0.00 0.00 0.00 2.59
254 255 5.599999 AGAGTAATGCCACACCTAAGTAG 57.400 43.478 0.00 0.00 0.00 2.57
255 256 6.212791 AGAAAGAGTAATGCCACACCTAAGTA 59.787 38.462 0.00 0.00 0.00 2.24
256 257 4.910458 AAGAGTAATGCCACACCTAAGT 57.090 40.909 0.00 0.00 0.00 2.24
257 258 5.491982 AGAAAGAGTAATGCCACACCTAAG 58.508 41.667 0.00 0.00 0.00 2.18
258 259 5.499004 AGAAAGAGTAATGCCACACCTAA 57.501 39.130 0.00 0.00 0.00 2.69
259 260 5.105064 GGTAGAAAGAGTAATGCCACACCTA 60.105 44.000 0.00 0.00 0.00 3.08
260 261 4.323562 GGTAGAAAGAGTAATGCCACACCT 60.324 45.833 0.00 0.00 0.00 4.00
261 262 3.939592 GGTAGAAAGAGTAATGCCACACC 59.060 47.826 0.00 0.00 0.00 4.16
262 263 3.617263 CGGTAGAAAGAGTAATGCCACAC 59.383 47.826 0.00 0.00 0.00 3.82
263 264 3.259876 ACGGTAGAAAGAGTAATGCCACA 59.740 43.478 0.00 0.00 0.00 4.17
264 265 3.858247 ACGGTAGAAAGAGTAATGCCAC 58.142 45.455 0.00 0.00 0.00 5.01
265 266 3.767673 AGACGGTAGAAAGAGTAATGCCA 59.232 43.478 0.00 0.00 0.00 4.92
266 267 4.388378 AGACGGTAGAAAGAGTAATGCC 57.612 45.455 0.00 0.00 0.00 4.40
267 268 6.134040 ACTAGACGGTAGAAAGAGTAATGC 57.866 41.667 0.00 0.00 0.00 3.56
268 269 7.009357 GCAAACTAGACGGTAGAAAGAGTAATG 59.991 40.741 0.00 0.00 0.00 1.90
269 270 7.034397 GCAAACTAGACGGTAGAAAGAGTAAT 58.966 38.462 0.00 0.00 0.00 1.89
270 271 6.208204 AGCAAACTAGACGGTAGAAAGAGTAA 59.792 38.462 0.00 0.00 0.00 2.24
271 272 5.709164 AGCAAACTAGACGGTAGAAAGAGTA 59.291 40.000 0.00 0.00 0.00 2.59
272 273 4.523558 AGCAAACTAGACGGTAGAAAGAGT 59.476 41.667 0.00 0.00 0.00 3.24
273 274 4.859798 CAGCAAACTAGACGGTAGAAAGAG 59.140 45.833 0.00 0.00 0.00 2.85
274 275 4.521639 TCAGCAAACTAGACGGTAGAAAGA 59.478 41.667 0.00 0.00 0.00 2.52
275 276 4.806330 TCAGCAAACTAGACGGTAGAAAG 58.194 43.478 0.00 0.00 0.00 2.62
276 277 4.859304 TCAGCAAACTAGACGGTAGAAA 57.141 40.909 0.00 0.00 0.00 2.52
277 278 4.806330 CTTCAGCAAACTAGACGGTAGAA 58.194 43.478 0.00 0.00 0.00 2.10
278 279 3.367087 GCTTCAGCAAACTAGACGGTAGA 60.367 47.826 0.00 0.00 41.59 2.59
279 280 2.924290 GCTTCAGCAAACTAGACGGTAG 59.076 50.000 0.00 0.00 41.59 3.18
280 281 2.955614 GCTTCAGCAAACTAGACGGTA 58.044 47.619 0.00 0.00 41.59 4.02
281 282 1.797025 GCTTCAGCAAACTAGACGGT 58.203 50.000 0.00 0.00 41.59 4.83
293 294 2.633509 CCCTGCAACCTGCTTCAGC 61.634 63.158 0.00 0.00 45.31 4.26
294 295 1.975407 CCCCTGCAACCTGCTTCAG 60.975 63.158 0.00 0.00 45.31 3.02
295 296 2.115910 CCCCTGCAACCTGCTTCA 59.884 61.111 0.00 0.00 45.31 3.02
296 297 3.376918 GCCCCTGCAACCTGCTTC 61.377 66.667 0.00 0.00 45.31 3.86
300 301 2.793317 AATCTGGCCCCTGCAACCTG 62.793 60.000 0.00 0.00 40.13 4.00
301 302 2.097978 AAATCTGGCCCCTGCAACCT 62.098 55.000 0.00 0.00 40.13 3.50
302 303 1.607801 GAAATCTGGCCCCTGCAACC 61.608 60.000 0.00 0.00 40.13 3.77
303 304 0.613012 AGAAATCTGGCCCCTGCAAC 60.613 55.000 0.00 0.00 40.13 4.17
304 305 0.998928 TAGAAATCTGGCCCCTGCAA 59.001 50.000 0.00 0.00 40.13 4.08
305 306 0.255890 GTAGAAATCTGGCCCCTGCA 59.744 55.000 0.00 0.00 40.13 4.41
306 307 0.548510 AGTAGAAATCTGGCCCCTGC 59.451 55.000 0.00 0.00 0.00 4.85
307 308 1.839994 TCAGTAGAAATCTGGCCCCTG 59.160 52.381 0.00 0.00 34.15 4.45
308 309 1.840635 GTCAGTAGAAATCTGGCCCCT 59.159 52.381 0.00 0.00 32.19 4.79
309 310 1.559682 TGTCAGTAGAAATCTGGCCCC 59.440 52.381 0.00 0.00 36.80 5.80
310 311 2.027192 TGTGTCAGTAGAAATCTGGCCC 60.027 50.000 0.00 0.00 36.80 5.80
311 312 3.334583 TGTGTCAGTAGAAATCTGGCC 57.665 47.619 0.00 0.00 36.80 5.36
312 313 4.757149 ACTTTGTGTCAGTAGAAATCTGGC 59.243 41.667 0.00 0.00 37.94 4.85
313 314 6.867662 AACTTTGTGTCAGTAGAAATCTGG 57.132 37.500 0.00 0.00 34.15 3.86
314 315 9.651718 GTTTAACTTTGTGTCAGTAGAAATCTG 57.348 33.333 0.00 0.00 0.00 2.90
315 316 9.614792 AGTTTAACTTTGTGTCAGTAGAAATCT 57.385 29.630 0.00 0.00 0.00 2.40
321 322 9.382244 GCATTTAGTTTAACTTTGTGTCAGTAG 57.618 33.333 1.94 0.00 0.00 2.57
322 323 8.347035 GGCATTTAGTTTAACTTTGTGTCAGTA 58.653 33.333 1.94 0.00 0.00 2.74
323 324 7.200455 GGCATTTAGTTTAACTTTGTGTCAGT 58.800 34.615 1.94 0.00 0.00 3.41
324 325 6.359617 CGGCATTTAGTTTAACTTTGTGTCAG 59.640 38.462 1.94 0.00 0.00 3.51
325 326 6.183360 ACGGCATTTAGTTTAACTTTGTGTCA 60.183 34.615 1.94 0.00 0.00 3.58
326 327 6.203647 ACGGCATTTAGTTTAACTTTGTGTC 58.796 36.000 1.94 0.83 0.00 3.67
327 328 6.139048 ACGGCATTTAGTTTAACTTTGTGT 57.861 33.333 1.94 1.02 0.00 3.72
328 329 7.458038 AAACGGCATTTAGTTTAACTTTGTG 57.542 32.000 1.94 1.33 38.61 3.33
329 330 8.481974 AAAAACGGCATTTAGTTTAACTTTGT 57.518 26.923 1.94 0.00 39.36 2.83
331 332 9.806203 ACTAAAAACGGCATTTAGTTTAACTTT 57.194 25.926 1.94 0.00 46.25 2.66
340 341 7.526608 TCATCAGAACTAAAAACGGCATTTAG 58.473 34.615 12.48 12.48 43.04 1.85
341 342 7.441890 TCATCAGAACTAAAAACGGCATTTA 57.558 32.000 0.00 0.00 0.00 1.40
342 343 6.325919 TCATCAGAACTAAAAACGGCATTT 57.674 33.333 0.00 0.00 0.00 2.32
343 344 5.957842 TCATCAGAACTAAAAACGGCATT 57.042 34.783 0.00 0.00 0.00 3.56
344 345 5.163622 CCATCATCAGAACTAAAAACGGCAT 60.164 40.000 0.00 0.00 0.00 4.40
345 346 4.155826 CCATCATCAGAACTAAAAACGGCA 59.844 41.667 0.00 0.00 0.00 5.69
346 347 4.438744 CCCATCATCAGAACTAAAAACGGC 60.439 45.833 0.00 0.00 0.00 5.68
347 348 4.700213 ACCCATCATCAGAACTAAAAACGG 59.300 41.667 0.00 0.00 0.00 4.44
348 349 5.391950 CCACCCATCATCAGAACTAAAAACG 60.392 44.000 0.00 0.00 0.00 3.60
349 350 5.622233 GCCACCCATCATCAGAACTAAAAAC 60.622 44.000 0.00 0.00 0.00 2.43
350 351 4.462483 GCCACCCATCATCAGAACTAAAAA 59.538 41.667 0.00 0.00 0.00 1.94
351 352 4.016444 GCCACCCATCATCAGAACTAAAA 58.984 43.478 0.00 0.00 0.00 1.52
352 353 3.010027 TGCCACCCATCATCAGAACTAAA 59.990 43.478 0.00 0.00 0.00 1.85
353 354 2.575735 TGCCACCCATCATCAGAACTAA 59.424 45.455 0.00 0.00 0.00 2.24
354 355 2.171237 CTGCCACCCATCATCAGAACTA 59.829 50.000 0.00 0.00 0.00 2.24
355 356 0.994247 TGCCACCCATCATCAGAACT 59.006 50.000 0.00 0.00 0.00 3.01
356 357 1.386533 CTGCCACCCATCATCAGAAC 58.613 55.000 0.00 0.00 0.00 3.01
357 358 0.256752 CCTGCCACCCATCATCAGAA 59.743 55.000 0.00 0.00 0.00 3.02
358 359 0.621280 TCCTGCCACCCATCATCAGA 60.621 55.000 0.00 0.00 0.00 3.27
359 360 0.256752 TTCCTGCCACCCATCATCAG 59.743 55.000 0.00 0.00 0.00 2.90
360 361 0.256752 CTTCCTGCCACCCATCATCA 59.743 55.000 0.00 0.00 0.00 3.07
361 362 1.105759 GCTTCCTGCCACCCATCATC 61.106 60.000 0.00 0.00 35.15 2.92
362 363 1.076485 GCTTCCTGCCACCCATCAT 60.076 57.895 0.00 0.00 35.15 2.45
363 364 2.233566 AGCTTCCTGCCACCCATCA 61.234 57.895 0.00 0.00 44.23 3.07
364 365 1.751927 CAGCTTCCTGCCACCCATC 60.752 63.158 0.00 0.00 44.23 3.51
365 366 2.357836 CAGCTTCCTGCCACCCAT 59.642 61.111 0.00 0.00 44.23 4.00
373 374 1.888215 TCTCAAAGTGCAGCTTCCTG 58.112 50.000 0.00 0.00 42.13 3.86
374 375 2.434428 CATCTCAAAGTGCAGCTTCCT 58.566 47.619 0.00 0.00 36.17 3.36
375 376 1.135460 GCATCTCAAAGTGCAGCTTCC 60.135 52.381 0.00 0.00 40.94 3.46
376 377 1.538512 TGCATCTCAAAGTGCAGCTTC 59.461 47.619 0.00 0.00 45.60 3.86
377 378 1.612676 TGCATCTCAAAGTGCAGCTT 58.387 45.000 0.00 0.00 45.60 3.74
378 379 3.334413 TGCATCTCAAAGTGCAGCT 57.666 47.368 0.00 0.00 45.60 4.24
382 383 0.239347 AACGCTGCATCTCAAAGTGC 59.761 50.000 0.00 0.00 41.61 4.40
383 384 4.329801 TGTATAACGCTGCATCTCAAAGTG 59.670 41.667 0.00 0.00 0.00 3.16
384 385 4.503910 TGTATAACGCTGCATCTCAAAGT 58.496 39.130 0.00 0.00 0.00 2.66
385 386 5.663795 ATGTATAACGCTGCATCTCAAAG 57.336 39.130 0.00 0.00 0.00 2.77
386 387 6.093357 TCAAATGTATAACGCTGCATCTCAAA 59.907 34.615 0.00 0.00 0.00 2.69
387 388 5.584251 TCAAATGTATAACGCTGCATCTCAA 59.416 36.000 0.00 0.00 0.00 3.02
388 389 5.115480 TCAAATGTATAACGCTGCATCTCA 58.885 37.500 0.00 0.00 0.00 3.27
389 390 5.463392 TCTCAAATGTATAACGCTGCATCTC 59.537 40.000 0.00 0.00 0.00 2.75
390 391 5.359756 TCTCAAATGTATAACGCTGCATCT 58.640 37.500 0.00 0.00 0.00 2.90
391 392 5.235186 ACTCTCAAATGTATAACGCTGCATC 59.765 40.000 0.00 0.00 0.00 3.91
392 393 5.118990 ACTCTCAAATGTATAACGCTGCAT 58.881 37.500 0.00 0.00 0.00 3.96
393 394 4.503910 ACTCTCAAATGTATAACGCTGCA 58.496 39.130 0.00 0.00 0.00 4.41
394 395 5.470845 AACTCTCAAATGTATAACGCTGC 57.529 39.130 0.00 0.00 0.00 5.25
409 410 9.886132 GTCCAAACTAATCCTAATTAACTCTCA 57.114 33.333 0.00 0.00 0.00 3.27
410 411 9.886132 TGTCCAAACTAATCCTAATTAACTCTC 57.114 33.333 0.00 0.00 0.00 3.20
416 417 9.120538 GCTCATTGTCCAAACTAATCCTAATTA 57.879 33.333 0.00 0.00 0.00 1.40
417 418 7.615365 TGCTCATTGTCCAAACTAATCCTAATT 59.385 33.333 0.00 0.00 0.00 1.40
418 419 7.118723 TGCTCATTGTCCAAACTAATCCTAAT 58.881 34.615 0.00 0.00 0.00 1.73
419 420 6.480763 TGCTCATTGTCCAAACTAATCCTAA 58.519 36.000 0.00 0.00 0.00 2.69
420 421 6.061022 TGCTCATTGTCCAAACTAATCCTA 57.939 37.500 0.00 0.00 0.00 2.94
421 422 4.922206 TGCTCATTGTCCAAACTAATCCT 58.078 39.130 0.00 0.00 0.00 3.24
422 423 4.943705 TCTGCTCATTGTCCAAACTAATCC 59.056 41.667 0.00 0.00 0.00 3.01
423 424 5.448360 GCTCTGCTCATTGTCCAAACTAATC 60.448 44.000 0.00 0.00 0.00 1.75
424 425 4.397417 GCTCTGCTCATTGTCCAAACTAAT 59.603 41.667 0.00 0.00 0.00 1.73
425 426 3.753272 GCTCTGCTCATTGTCCAAACTAA 59.247 43.478 0.00 0.00 0.00 2.24
426 427 3.008375 AGCTCTGCTCATTGTCCAAACTA 59.992 43.478 0.00 0.00 30.62 2.24
427 428 2.157738 GCTCTGCTCATTGTCCAAACT 58.842 47.619 0.00 0.00 0.00 2.66
428 429 2.157738 AGCTCTGCTCATTGTCCAAAC 58.842 47.619 0.00 0.00 30.62 2.93
429 430 2.574006 AGCTCTGCTCATTGTCCAAA 57.426 45.000 0.00 0.00 30.62 3.28
430 431 2.574006 AAGCTCTGCTCATTGTCCAA 57.426 45.000 0.00 0.00 38.25 3.53
431 432 2.679059 GCTAAGCTCTGCTCATTGTCCA 60.679 50.000 3.95 0.00 38.25 4.02
432 433 1.939255 GCTAAGCTCTGCTCATTGTCC 59.061 52.381 3.95 0.00 38.25 4.02
433 434 2.903798 AGCTAAGCTCTGCTCATTGTC 58.096 47.619 7.49 0.00 38.25 3.18
434 435 4.440880 CTTAGCTAAGCTCTGCTCATTGT 58.559 43.478 20.13 0.00 38.25 2.71
435 436 3.808726 CCTTAGCTAAGCTCTGCTCATTG 59.191 47.826 25.38 5.88 38.25 2.82
436 437 3.708631 TCCTTAGCTAAGCTCTGCTCATT 59.291 43.478 25.38 0.00 38.25 2.57
437 438 3.303938 TCCTTAGCTAAGCTCTGCTCAT 58.696 45.455 25.38 0.00 38.25 2.90
438 439 2.739943 TCCTTAGCTAAGCTCTGCTCA 58.260 47.619 25.38 5.80 38.25 4.26
439 440 3.810310 TTCCTTAGCTAAGCTCTGCTC 57.190 47.619 25.38 0.00 38.25 4.26
440 441 3.454082 ACATTCCTTAGCTAAGCTCTGCT 59.546 43.478 25.38 16.01 42.56 4.24
441 442 3.802866 ACATTCCTTAGCTAAGCTCTGC 58.197 45.455 25.38 3.04 40.44 4.26
442 443 5.669477 AGAACATTCCTTAGCTAAGCTCTG 58.331 41.667 25.38 21.21 40.44 3.35
443 444 5.948742 AGAACATTCCTTAGCTAAGCTCT 57.051 39.130 25.38 15.72 40.44 4.09
444 445 6.993786 AAAGAACATTCCTTAGCTAAGCTC 57.006 37.500 25.38 14.11 40.44 4.09
463 464 8.430063 GCAGCGCGTATACTTAAATAATAAAGA 58.570 33.333 8.43 0.00 0.00 2.52
464 465 8.433126 AGCAGCGCGTATACTTAAATAATAAAG 58.567 33.333 8.43 0.00 0.00 1.85
465 466 8.218441 CAGCAGCGCGTATACTTAAATAATAAA 58.782 33.333 8.43 0.00 0.00 1.40
466 467 7.148705 CCAGCAGCGCGTATACTTAAATAATAA 60.149 37.037 8.43 0.00 0.00 1.40
467 468 6.309494 CCAGCAGCGCGTATACTTAAATAATA 59.691 38.462 8.43 0.00 0.00 0.98
468 469 5.120208 CCAGCAGCGCGTATACTTAAATAAT 59.880 40.000 8.43 0.00 0.00 1.28
469 470 4.446385 CCAGCAGCGCGTATACTTAAATAA 59.554 41.667 8.43 0.00 0.00 1.40
470 471 3.985279 CCAGCAGCGCGTATACTTAAATA 59.015 43.478 8.43 0.00 0.00 1.40
471 472 2.800544 CCAGCAGCGCGTATACTTAAAT 59.199 45.455 8.43 0.00 0.00 1.40
472 473 2.198406 CCAGCAGCGCGTATACTTAAA 58.802 47.619 8.43 0.00 0.00 1.52
473 474 1.135527 ACCAGCAGCGCGTATACTTAA 59.864 47.619 8.43 0.00 0.00 1.85
474 475 0.742505 ACCAGCAGCGCGTATACTTA 59.257 50.000 8.43 0.00 0.00 2.24
475 476 0.806102 CACCAGCAGCGCGTATACTT 60.806 55.000 8.43 0.00 0.00 2.24
476 477 1.226974 CACCAGCAGCGCGTATACT 60.227 57.895 8.43 0.00 0.00 2.12
477 478 2.871427 GCACCAGCAGCGCGTATAC 61.871 63.158 8.43 0.00 41.58 1.47
478 479 2.572095 AAGCACCAGCAGCGCGTATA 62.572 55.000 8.43 0.00 45.49 1.47
479 480 3.958147 AAGCACCAGCAGCGCGTAT 62.958 57.895 8.43 0.00 45.49 3.06
480 481 4.680237 AAGCACCAGCAGCGCGTA 62.680 61.111 8.43 0.00 45.49 4.42
482 483 3.829272 AAAAAGCACCAGCAGCGCG 62.829 57.895 0.00 0.00 45.49 6.86
483 484 2.028043 AAAAAGCACCAGCAGCGC 59.972 55.556 0.00 0.00 45.49 5.92
484 485 0.662374 CTCAAAAAGCACCAGCAGCG 60.662 55.000 0.00 0.00 45.49 5.18
485 486 0.386838 ACTCAAAAAGCACCAGCAGC 59.613 50.000 0.00 0.00 45.49 5.25
486 487 1.677576 TCACTCAAAAAGCACCAGCAG 59.322 47.619 0.00 0.00 45.49 4.24
487 488 1.761449 TCACTCAAAAAGCACCAGCA 58.239 45.000 0.00 0.00 45.49 4.41
488 489 3.375782 AATCACTCAAAAAGCACCAGC 57.624 42.857 0.00 0.00 42.56 4.85
489 490 4.935702 TCAAATCACTCAAAAAGCACCAG 58.064 39.130 0.00 0.00 0.00 4.00
490 491 4.644234 TCTCAAATCACTCAAAAAGCACCA 59.356 37.500 0.00 0.00 0.00 4.17
491 492 5.186996 TCTCAAATCACTCAAAAAGCACC 57.813 39.130 0.00 0.00 0.00 5.01
492 493 4.678742 GCTCTCAAATCACTCAAAAAGCAC 59.321 41.667 0.00 0.00 0.00 4.40
493 494 4.261741 GGCTCTCAAATCACTCAAAAAGCA 60.262 41.667 0.00 0.00 0.00 3.91
494 495 4.022503 AGGCTCTCAAATCACTCAAAAAGC 60.023 41.667 0.00 0.00 0.00 3.51
495 496 5.240183 TCAGGCTCTCAAATCACTCAAAAAG 59.760 40.000 0.00 0.00 0.00 2.27
496 497 5.132502 TCAGGCTCTCAAATCACTCAAAAA 58.867 37.500 0.00 0.00 0.00 1.94
497 498 4.717877 TCAGGCTCTCAAATCACTCAAAA 58.282 39.130 0.00 0.00 0.00 2.44
498 499 4.356405 TCAGGCTCTCAAATCACTCAAA 57.644 40.909 0.00 0.00 0.00 2.69
499 500 4.321718 CTTCAGGCTCTCAAATCACTCAA 58.678 43.478 0.00 0.00 0.00 3.02
500 501 3.867600 GCTTCAGGCTCTCAAATCACTCA 60.868 47.826 0.00 0.00 38.06 3.41
501 502 2.677337 GCTTCAGGCTCTCAAATCACTC 59.323 50.000 0.00 0.00 38.06 3.51
502 503 2.617532 GGCTTCAGGCTCTCAAATCACT 60.618 50.000 0.00 0.00 41.46 3.41
503 504 1.742268 GGCTTCAGGCTCTCAAATCAC 59.258 52.381 0.00 0.00 41.46 3.06
504 505 1.676916 CGGCTTCAGGCTCTCAAATCA 60.677 52.381 0.00 0.00 41.46 2.57
505 506 1.012841 CGGCTTCAGGCTCTCAAATC 58.987 55.000 0.00 0.00 41.46 2.17
506 507 0.393537 CCGGCTTCAGGCTCTCAAAT 60.394 55.000 0.00 0.00 41.46 2.32
507 508 1.003355 CCGGCTTCAGGCTCTCAAA 60.003 57.895 0.00 0.00 41.46 2.69
508 509 2.665000 CCGGCTTCAGGCTCTCAA 59.335 61.111 0.00 0.00 41.46 3.02
515 516 2.109126 GCAGTAAGCCGGCTTCAGG 61.109 63.158 43.34 31.29 37.47 3.86
516 517 1.375908 TGCAGTAAGCCGGCTTCAG 60.376 57.895 43.34 31.84 44.83 3.02
517 518 1.671054 GTGCAGTAAGCCGGCTTCA 60.671 57.895 43.34 31.17 44.83 3.02
518 519 0.955919 AAGTGCAGTAAGCCGGCTTC 60.956 55.000 43.34 31.60 44.83 3.86
519 520 0.537371 AAAGTGCAGTAAGCCGGCTT 60.537 50.000 41.05 41.05 44.83 4.35
520 521 0.537371 AAAAGTGCAGTAAGCCGGCT 60.537 50.000 27.08 27.08 44.83 5.52
521 522 0.313987 AAAAAGTGCAGTAAGCCGGC 59.686 50.000 21.89 21.89 44.83 6.13
538 539 5.017490 TCAACCCAACCACTGTCTTAAAAA 58.983 37.500 0.00 0.00 0.00 1.94
539 540 4.601084 TCAACCCAACCACTGTCTTAAAA 58.399 39.130 0.00 0.00 0.00 1.52
540 541 4.237976 TCAACCCAACCACTGTCTTAAA 57.762 40.909 0.00 0.00 0.00 1.52
541 542 3.935818 TCAACCCAACCACTGTCTTAA 57.064 42.857 0.00 0.00 0.00 1.85
542 543 3.935818 TTCAACCCAACCACTGTCTTA 57.064 42.857 0.00 0.00 0.00 2.10
543 544 2.758423 GTTTCAACCCAACCACTGTCTT 59.242 45.455 0.00 0.00 0.00 3.01
544 545 2.291282 TGTTTCAACCCAACCACTGTCT 60.291 45.455 0.00 0.00 0.00 3.41
545 546 2.096248 TGTTTCAACCCAACCACTGTC 58.904 47.619 0.00 0.00 0.00 3.51
546 547 2.223803 TGTTTCAACCCAACCACTGT 57.776 45.000 0.00 0.00 0.00 3.55
547 548 3.601443 TTTGTTTCAACCCAACCACTG 57.399 42.857 0.00 0.00 0.00 3.66
548 549 4.223923 TCAATTTGTTTCAACCCAACCACT 59.776 37.500 0.00 0.00 0.00 4.00
549 550 4.331443 GTCAATTTGTTTCAACCCAACCAC 59.669 41.667 0.00 0.00 0.00 4.16
550 551 4.020218 TGTCAATTTGTTTCAACCCAACCA 60.020 37.500 0.00 0.00 0.00 3.67
551 552 4.508662 TGTCAATTTGTTTCAACCCAACC 58.491 39.130 0.00 0.00 0.00 3.77
552 553 5.503846 GCATGTCAATTTGTTTCAACCCAAC 60.504 40.000 0.00 0.00 0.00 3.77
553 554 4.574013 GCATGTCAATTTGTTTCAACCCAA 59.426 37.500 0.00 0.00 0.00 4.12
554 555 4.125703 GCATGTCAATTTGTTTCAACCCA 58.874 39.130 0.00 0.00 0.00 4.51
555 556 4.125703 TGCATGTCAATTTGTTTCAACCC 58.874 39.130 0.00 0.00 0.00 4.11
556 557 5.466058 TCATGCATGTCAATTTGTTTCAACC 59.534 36.000 25.43 0.00 0.00 3.77
557 558 6.528014 TCATGCATGTCAATTTGTTTCAAC 57.472 33.333 25.43 0.00 0.00 3.18
558 559 7.441458 TCAATCATGCATGTCAATTTGTTTCAA 59.559 29.630 25.43 1.99 0.00 2.69
587 588 0.515564 GACACCCGACCGTGAATTTG 59.484 55.000 4.56 0.00 37.20 2.32
588 589 0.604511 GGACACCCGACCGTGAATTT 60.605 55.000 4.56 0.00 37.20 1.82
600 633 2.164219 CACATAAGCACAATGGACACCC 59.836 50.000 0.00 0.00 0.00 4.61
644 677 7.639850 TCGATTCATTTGCTTGAATATCGAAAC 59.360 33.333 14.84 2.84 44.35 2.78
657 690 1.164411 TGCCGTTCGATTCATTTGCT 58.836 45.000 0.00 0.00 0.00 3.91
679 712 1.817941 AACACGCCCACACACAGTC 60.818 57.895 0.00 0.00 0.00 3.51
683 716 1.196808 CTTATCAACACGCCCACACAC 59.803 52.381 0.00 0.00 0.00 3.82
684 717 1.202710 ACTTATCAACACGCCCACACA 60.203 47.619 0.00 0.00 0.00 3.72
688 721 0.958382 GGCACTTATCAACACGCCCA 60.958 55.000 0.00 0.00 33.31 5.36
787 820 9.171877 TGCAAGGAAAAACAACATTATTTTTCT 57.828 25.926 16.35 5.67 46.72 2.52
964 2108 6.818644 ACTATATGCGGTGCCTAAAGATATTG 59.181 38.462 0.00 0.00 0.00 1.90
1074 2219 1.227674 GAGGAAGCATAGGGTGGCG 60.228 63.158 0.00 0.00 34.54 5.69
1135 2280 5.928976 TGGAATGAGAAGAGAGAAACACAA 58.071 37.500 0.00 0.00 0.00 3.33
1392 2552 4.763073 TCCTCAGCACATTCATCTTACAG 58.237 43.478 0.00 0.00 0.00 2.74
1503 2663 9.391006 TCAACATTAGTAGCGGAAGAATTATTT 57.609 29.630 0.00 0.00 0.00 1.40
1520 2683 5.707298 ACAGAGTCCCACAATTCAACATTAG 59.293 40.000 0.00 0.00 0.00 1.73
1536 2699 2.703416 TGATGCACATGAACAGAGTCC 58.297 47.619 0.00 0.00 0.00 3.85
1556 2719 8.486210 TGAGCTTCTCTATTGTTGGTATATGTT 58.514 33.333 0.00 0.00 0.00 2.71
1602 2765 4.850859 TTACGCATTATTTCTCACACGG 57.149 40.909 0.00 0.00 0.00 4.94
1811 2987 0.395173 TGGTCCTCGGATGATCGACA 60.395 55.000 0.00 0.00 35.18 4.35
1985 3162 3.253188 CCAACATAATAGCACCGGAATGG 59.747 47.826 9.46 0.00 46.41 3.16
2024 3201 3.548770 TCATATATAGCGGGGGTAGACG 58.451 50.000 0.00 0.00 0.00 4.18
2050 3227 6.618610 TCCTAGTAGGACACTTGTATCCTAGA 59.381 42.308 15.33 0.50 46.10 2.43
2111 3288 4.012374 CGGTAGGTTACAGTTGGACTCTA 58.988 47.826 0.00 0.00 0.00 2.43
2274 3453 2.840038 AGTTGCAGGTGGAGTCATATGA 59.160 45.455 0.00 0.00 0.00 2.15
2380 3559 2.494471 TGATGTCGTTGGACGGATACTT 59.506 45.455 0.27 0.00 46.49 2.24
2396 3575 4.284490 AGGTTAGTGATCAGTGTGTGATGT 59.716 41.667 13.54 0.00 46.64 3.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.