Multiple sequence alignment - TraesCS2A01G560200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G560200 chr2A 100.000 3938 0 0 1 3938 762617408 762621345 0.000000e+00 7273.0
1 TraesCS2A01G560200 chr2A 81.488 551 90 11 2352 2896 762604304 762604848 3.610000e-120 442.0
2 TraesCS2A01G560200 chr2A 76.816 716 125 27 1366 2060 762568187 762568882 8.040000e-97 364.0
3 TraesCS2A01G560200 chr2A 77.298 533 76 23 1366 1875 762590505 762591015 5.010000e-69 272.0
4 TraesCS2A01G560200 chr2A 77.328 494 88 12 1387 1875 762522844 762523318 1.800000e-68 270.0
5 TraesCS2A01G560200 chr2A 90.909 121 10 1 532 651 762570273 762570393 1.130000e-35 161.0
6 TraesCS2A01G560200 chr2A 82.883 111 12 6 705 814 762601685 762601789 4.190000e-15 93.5
7 TraesCS2A01G560200 chr2A 86.667 75 9 1 576 650 762567501 762567574 9.070000e-12 82.4
8 TraesCS2A01G560200 chr2A 96.970 33 1 0 2659 2691 762561067 762561099 5.500000e-04 56.5
9 TraesCS2A01G560200 chrUn 89.171 1182 67 23 713 1877 24004707 24003570 0.000000e+00 1417.0
10 TraesCS2A01G560200 chrUn 90.038 1064 92 9 1891 2952 24003456 24002405 0.000000e+00 1365.0
11 TraesCS2A01G560200 chrUn 87.764 899 59 16 3045 3937 24001985 24001132 0.000000e+00 1003.0
12 TraesCS2A01G560200 chrUn 77.186 526 83 20 1366 1875 308959548 308960052 5.010000e-69 272.0
13 TraesCS2A01G560200 chrUn 87.838 148 16 2 673 819 24005107 24004961 5.230000e-39 172.0
14 TraesCS2A01G560200 chrUn 90.826 109 8 1 2942 3048 24002364 24002256 1.140000e-30 145.0
15 TraesCS2A01G560200 chrUn 85.821 134 17 2 682 815 308957734 308957865 1.480000e-29 141.0
16 TraesCS2A01G560200 chrUn 92.208 77 5 1 574 650 22332953 22333028 1.500000e-19 108.0
17 TraesCS2A01G560200 chrUn 90.244 82 6 2 569 650 308958879 308958958 5.380000e-19 106.0
18 TraesCS2A01G560200 chrUn 93.220 59 3 1 593 650 308957594 308957652 7.010000e-13 86.1
19 TraesCS2A01G560200 chrUn 83.158 95 9 4 705 798 24006209 24006121 3.260000e-11 80.5
20 TraesCS2A01G560200 chrUn 92.857 42 3 0 57 98 367941221 367941180 1.180000e-05 62.1
21 TraesCS2A01G560200 chrUn 90.476 42 4 0 57 98 334548417 334548376 5.500000e-04 56.5
22 TraesCS2A01G560200 chr2D 85.642 1191 124 32 1239 2415 637435738 637434581 0.000000e+00 1208.0
23 TraesCS2A01G560200 chr2D 89.228 492 30 11 2942 3427 637434028 637433554 9.420000e-166 593.0
24 TraesCS2A01G560200 chr2D 89.195 472 33 2 3466 3937 637433476 637433023 1.230000e-159 573.0
25 TraesCS2A01G560200 chr2D 87.205 508 51 7 2453 2946 637434581 637434074 2.050000e-157 566.0
26 TraesCS2A01G560200 chr2D 80.263 608 118 2 2346 2953 637444694 637444089 1.290000e-124 457.0
27 TraesCS2A01G560200 chr2D 74.120 1221 233 65 666 1860 637443268 637442105 1.010000e-115 427.0
28 TraesCS2A01G560200 chr2D 80.924 498 77 13 1366 1860 637445483 637445001 1.030000e-100 377.0
29 TraesCS2A01G560200 chr2D 80.488 533 57 25 3428 3937 637751480 637751988 8.040000e-97 364.0
30 TraesCS2A01G560200 chr2D 80.300 533 58 27 3428 3937 381050601 381051109 3.740000e-95 359.0
31 TraesCS2A01G560200 chr2B 81.421 549 101 1 2351 2899 794865773 794865226 7.760000e-122 448.0
32 TraesCS2A01G560200 chr2B 79.039 458 79 9 1379 1835 794785997 794786438 8.270000e-77 298.0
33 TraesCS2A01G560200 chr2B 77.186 526 83 21 1366 1875 794805698 794805194 5.010000e-69 272.0
34 TraesCS2A01G560200 chr2B 81.784 269 44 3 2448 2715 794786876 794787140 1.840000e-53 220.0
35 TraesCS2A01G560200 chr2B 85.821 134 17 2 682 815 794807512 794807381 1.480000e-29 141.0
36 TraesCS2A01G560200 chr2B 90.244 82 6 2 569 650 794806367 794806288 5.380000e-19 106.0
37 TraesCS2A01G560200 chr2B 93.220 59 3 1 593 650 794807652 794807594 7.010000e-13 86.1
38 TraesCS2A01G560200 chr2B 81.053 95 12 5 679 770 794817877 794817786 1.960000e-08 71.3
39 TraesCS2A01G560200 chr7D 92.857 42 3 0 57 98 578431240 578431199 1.180000e-05 62.1
40 TraesCS2A01G560200 chr7D 92.857 42 3 0 57 98 578435583 578435542 1.180000e-05 62.1
41 TraesCS2A01G560200 chr7D 92.857 42 3 0 57 98 578457123 578457082 1.180000e-05 62.1
42 TraesCS2A01G560200 chr7D 90.476 42 4 0 57 98 578441344 578441303 5.500000e-04 56.5
43 TraesCS2A01G560200 chr7D 90.476 42 4 0 57 98 578445653 578445612 5.500000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G560200 chr2A 762617408 762621345 3937 False 7273.000000 7273 100.000000 1 3938 1 chr2A.!!$F4 3937
1 TraesCS2A01G560200 chr2A 762590505 762591015 510 False 272.000000 272 77.298000 1366 1875 1 chr2A.!!$F3 509
2 TraesCS2A01G560200 chr2A 762601685 762604848 3163 False 267.750000 442 82.185500 705 2896 2 chr2A.!!$F6 2191
3 TraesCS2A01G560200 chr2A 762567501 762570393 2892 False 202.466667 364 84.797333 532 2060 3 chr2A.!!$F5 1528
4 TraesCS2A01G560200 chrUn 24001132 24006209 5077 True 697.083333 1417 88.132500 673 3937 6 chrUn.!!$R3 3264
5 TraesCS2A01G560200 chr2D 637433023 637435738 2715 True 735.000000 1208 87.817500 1239 3937 4 chr2D.!!$R1 2698
6 TraesCS2A01G560200 chr2D 637442105 637445483 3378 True 420.333333 457 78.435667 666 2953 3 chr2D.!!$R2 2287
7 TraesCS2A01G560200 chr2D 637751480 637751988 508 False 364.000000 364 80.488000 3428 3937 1 chr2D.!!$F2 509
8 TraesCS2A01G560200 chr2D 381050601 381051109 508 False 359.000000 359 80.300000 3428 3937 1 chr2D.!!$F1 509
9 TraesCS2A01G560200 chr2B 794865226 794865773 547 True 448.000000 448 81.421000 2351 2899 1 chr2B.!!$R2 548
10 TraesCS2A01G560200 chr2B 794785997 794787140 1143 False 259.000000 298 80.411500 1379 2715 2 chr2B.!!$F1 1336

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
401 402 0.032952 CCGGGTGAAAACTCAGTCGA 59.967 55.0 0.00 0.00 0.0 4.20 F
1298 2191 0.028770 TAGCGTTGTTGTTGCAGTGC 59.971 50.0 8.58 8.58 0.0 4.40 F
2267 3389 0.101759 CATTCATGCTTCAAGGCCCG 59.898 55.0 0.00 0.00 0.0 6.13 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2257 3378 0.251386 TTATGTTGGCGGGCCTTGAA 60.251 50.000 11.55 0.0 36.94 2.69 R
2571 3699 1.003233 GTGGAATCCACGAGGTCCTTT 59.997 52.381 17.46 0.0 44.95 3.11 R
3328 5789 0.249489 AAGAATCGGCGAGGAATCGG 60.249 55.000 17.22 0.0 0.00 4.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 4.069869 CTGGTCTGTGCCCAGTTG 57.930 61.111 0.00 0.00 43.73 3.16
22 23 3.357079 GGTCTGTGCCCAGTTGCG 61.357 66.667 0.00 0.00 39.82 4.85
23 24 3.357079 GTCTGTGCCCAGTTGCGG 61.357 66.667 0.00 0.00 39.82 5.69
41 42 2.355115 GCAACCCCTACCCTGGTG 59.645 66.667 0.00 0.00 34.34 4.17
42 43 2.535331 GCAACCCCTACCCTGGTGT 61.535 63.158 0.00 0.00 34.34 4.16
44 45 2.535331 AACCCCTACCCTGGTGTGC 61.535 63.158 0.00 0.00 34.34 4.57
45 46 2.610859 CCCCTACCCTGGTGTGCT 60.611 66.667 0.00 0.00 0.00 4.40
46 47 2.670148 CCCCTACCCTGGTGTGCTC 61.670 68.421 0.00 0.00 0.00 4.26
47 48 1.613630 CCCTACCCTGGTGTGCTCT 60.614 63.158 0.00 0.00 0.00 4.09
48 49 1.617947 CCCTACCCTGGTGTGCTCTC 61.618 65.000 0.00 0.00 0.00 3.20
50 51 0.247736 CTACCCTGGTGTGCTCTCAC 59.752 60.000 0.00 0.00 43.40 3.51
52 53 2.047844 CCTGGTGTGCTCTCACGG 60.048 66.667 0.00 0.00 46.01 4.94
53 54 2.740055 CTGGTGTGCTCTCACGGC 60.740 66.667 0.00 0.00 46.01 5.68
55 56 2.046892 GGTGTGCTCTCACGGCAT 60.047 61.111 0.00 0.00 46.01 4.40
56 57 1.218047 GGTGTGCTCTCACGGCATA 59.782 57.895 0.00 0.00 46.01 3.14
57 58 0.179073 GGTGTGCTCTCACGGCATAT 60.179 55.000 0.00 0.00 46.01 1.78
58 59 1.212616 GTGTGCTCTCACGGCATATC 58.787 55.000 0.00 0.00 46.01 1.63
60 61 0.390860 GTGCTCTCACGGCATATCCT 59.609 55.000 0.00 0.00 41.86 3.24
62 63 0.037790 GCTCTCACGGCATATCCTCC 60.038 60.000 0.00 0.00 0.00 4.30
63 64 0.605589 CTCTCACGGCATATCCTCCC 59.394 60.000 0.00 0.00 0.00 4.30
65 66 0.319728 CTCACGGCATATCCTCCCTG 59.680 60.000 0.00 0.00 0.00 4.45
69 70 2.759795 GCATATCCTCCCTGCCCC 59.240 66.667 0.00 0.00 0.00 5.80
70 71 3.072476 CATATCCTCCCTGCCCCG 58.928 66.667 0.00 0.00 0.00 5.73
71 72 2.203998 ATATCCTCCCTGCCCCGG 60.204 66.667 0.00 0.00 0.00 5.73
92 93 2.057503 CGTCTTCGGCCATATCTGAG 57.942 55.000 2.24 0.00 0.00 3.35
93 94 1.338337 CGTCTTCGGCCATATCTGAGT 59.662 52.381 2.24 0.00 0.00 3.41
94 95 2.605823 CGTCTTCGGCCATATCTGAGTC 60.606 54.545 2.24 0.00 0.00 3.36
95 96 1.609072 TCTTCGGCCATATCTGAGTCG 59.391 52.381 2.24 0.00 0.00 4.18
96 97 1.338337 CTTCGGCCATATCTGAGTCGT 59.662 52.381 2.24 0.00 0.00 4.34
97 98 0.668535 TCGGCCATATCTGAGTCGTG 59.331 55.000 2.24 0.00 0.00 4.35
98 99 0.941463 CGGCCATATCTGAGTCGTGC 60.941 60.000 2.24 0.00 0.00 5.34
102 103 2.477825 CCATATCTGAGTCGTGCTTGG 58.522 52.381 0.00 0.00 0.00 3.61
103 104 1.863454 CATATCTGAGTCGTGCTTGGC 59.137 52.381 0.00 0.00 0.00 4.52
104 105 0.175760 TATCTGAGTCGTGCTTGGCC 59.824 55.000 0.00 0.00 0.00 5.36
105 106 2.842394 ATCTGAGTCGTGCTTGGCCG 62.842 60.000 0.00 0.00 0.00 6.13
106 107 4.680237 TGAGTCGTGCTTGGCCGG 62.680 66.667 0.00 0.00 0.00 6.13
107 108 4.681978 GAGTCGTGCTTGGCCGGT 62.682 66.667 1.90 0.00 0.00 5.28
108 109 4.988598 AGTCGTGCTTGGCCGGTG 62.989 66.667 1.90 0.00 0.00 4.94
115 116 4.954970 CTTGGCCGGTGCAGGTGT 62.955 66.667 1.90 0.00 40.13 4.16
126 127 3.297620 CAGGTGTGCAAGGTGGCC 61.298 66.667 0.00 0.00 0.00 5.36
127 128 4.603535 AGGTGTGCAAGGTGGCCC 62.604 66.667 0.00 0.00 0.00 5.80
134 135 4.290622 CAAGGTGGCCCCTGCTGT 62.291 66.667 12.97 0.00 45.47 4.40
135 136 3.971702 AAGGTGGCCCCTGCTGTC 61.972 66.667 12.97 0.00 45.47 3.51
141 142 4.626081 GCCCCTGCTGTCACGTGT 62.626 66.667 16.51 0.00 33.53 4.49
142 143 2.666190 CCCCTGCTGTCACGTGTG 60.666 66.667 16.51 8.39 0.00 3.82
143 144 3.349006 CCCTGCTGTCACGTGTGC 61.349 66.667 16.51 17.75 0.00 4.57
144 145 3.705638 CCTGCTGTCACGTGTGCG 61.706 66.667 16.51 13.32 44.93 5.34
145 146 4.360027 CTGCTGTCACGTGTGCGC 62.360 66.667 16.51 15.71 42.83 6.09
148 149 4.969196 CTGTCACGTGTGCGCCCT 62.969 66.667 16.51 0.00 42.83 5.19
149 150 4.961511 TGTCACGTGTGCGCCCTC 62.962 66.667 16.51 0.00 42.83 4.30
153 154 4.760047 ACGTGTGCGCCCTCCATC 62.760 66.667 4.18 0.00 42.83 3.51
160 161 3.470888 CGCCCTCCATCCCGTCTT 61.471 66.667 0.00 0.00 0.00 3.01
161 162 2.190578 GCCCTCCATCCCGTCTTG 59.809 66.667 0.00 0.00 0.00 3.02
162 163 2.190578 CCCTCCATCCCGTCTTGC 59.809 66.667 0.00 0.00 0.00 4.01
163 164 2.370445 CCCTCCATCCCGTCTTGCT 61.370 63.158 0.00 0.00 0.00 3.91
164 165 1.153289 CCTCCATCCCGTCTTGCTG 60.153 63.158 0.00 0.00 0.00 4.41
165 166 1.153289 CTCCATCCCGTCTTGCTGG 60.153 63.158 0.00 0.00 0.00 4.85
166 167 2.825836 CCATCCCGTCTTGCTGGC 60.826 66.667 0.00 0.00 0.00 4.85
167 168 2.825836 CATCCCGTCTTGCTGGCC 60.826 66.667 0.00 0.00 0.00 5.36
168 169 4.115199 ATCCCGTCTTGCTGGCCC 62.115 66.667 0.00 0.00 0.00 5.80
184 185 2.138179 CCCGACCCGGTGTCCATAT 61.138 63.158 14.94 0.00 46.80 1.78
185 186 1.366366 CCGACCCGGTGTCCATATC 59.634 63.158 14.94 0.00 42.73 1.63
186 187 1.366366 CGACCCGGTGTCCATATCC 59.634 63.158 14.94 0.00 41.18 2.59
187 188 1.396607 CGACCCGGTGTCCATATCCA 61.397 60.000 14.94 0.00 41.18 3.41
188 189 1.056660 GACCCGGTGTCCATATCCAT 58.943 55.000 10.92 0.00 38.09 3.41
189 190 1.420138 GACCCGGTGTCCATATCCATT 59.580 52.381 10.92 0.00 38.09 3.16
193 194 1.238439 GGTGTCCATATCCATTGGCG 58.762 55.000 0.00 0.00 34.06 5.69
194 195 1.238439 GTGTCCATATCCATTGGCGG 58.762 55.000 0.00 0.00 34.06 6.13
195 196 0.537143 TGTCCATATCCATTGGCGGC 60.537 55.000 0.00 0.00 34.06 6.53
196 197 0.537143 GTCCATATCCATTGGCGGCA 60.537 55.000 7.97 7.97 34.06 5.69
197 198 0.537143 TCCATATCCATTGGCGGCAC 60.537 55.000 12.92 0.00 34.06 5.01
198 199 1.526575 CCATATCCATTGGCGGCACC 61.527 60.000 12.92 0.00 39.84 5.01
199 200 0.538057 CATATCCATTGGCGGCACCT 60.538 55.000 12.92 0.00 40.22 4.00
200 201 0.250901 ATATCCATTGGCGGCACCTC 60.251 55.000 12.92 0.00 40.22 3.85
201 202 2.337879 TATCCATTGGCGGCACCTCC 62.338 60.000 12.92 0.00 40.22 4.30
203 204 4.431131 CATTGGCGGCACCTCCCT 62.431 66.667 12.92 0.00 40.22 4.20
205 206 3.043999 ATTGGCGGCACCTCCCTAC 62.044 63.158 12.92 0.00 40.22 3.18
207 208 4.162690 GGCGGCACCTCCCTACAG 62.163 72.222 3.07 0.00 34.51 2.74
208 209 4.840005 GCGGCACCTCCCTACAGC 62.840 72.222 0.00 0.00 0.00 4.40
209 210 4.514577 CGGCACCTCCCTACAGCG 62.515 72.222 0.00 0.00 0.00 5.18
211 212 4.840005 GCACCTCCCTACAGCGGC 62.840 72.222 0.00 0.00 0.00 6.53
212 213 4.162690 CACCTCCCTACAGCGGCC 62.163 72.222 0.00 0.00 0.00 6.13
213 214 4.400251 ACCTCCCTACAGCGGCCT 62.400 66.667 0.00 0.00 0.00 5.19
214 215 3.083997 CCTCCCTACAGCGGCCTT 61.084 66.667 0.00 0.00 0.00 4.35
215 216 2.501610 CTCCCTACAGCGGCCTTC 59.498 66.667 0.00 0.00 0.00 3.46
216 217 3.081409 TCCCTACAGCGGCCTTCC 61.081 66.667 0.00 0.00 0.00 3.46
226 227 4.237207 GGCCTTCCGGTCGGATCC 62.237 72.222 13.16 0.00 44.74 3.36
251 252 3.900892 CCCGCGCTATGACCTCGT 61.901 66.667 5.56 0.00 0.00 4.18
252 253 2.655364 CCGCGCTATGACCTCGTG 60.655 66.667 5.56 0.00 0.00 4.35
253 254 2.102357 CGCGCTATGACCTCGTGT 59.898 61.111 5.56 0.00 0.00 4.49
254 255 1.516386 CGCGCTATGACCTCGTGTT 60.516 57.895 5.56 0.00 0.00 3.32
255 256 1.076533 CGCGCTATGACCTCGTGTTT 61.077 55.000 5.56 0.00 0.00 2.83
258 259 2.333926 CGCTATGACCTCGTGTTTTCA 58.666 47.619 0.00 0.00 0.00 2.69
259 260 2.930040 CGCTATGACCTCGTGTTTTCAT 59.070 45.455 0.00 0.00 33.31 2.57
260 261 3.242091 CGCTATGACCTCGTGTTTTCATG 60.242 47.826 0.00 0.00 38.10 3.07
261 262 3.063997 GCTATGACCTCGTGTTTTCATGG 59.936 47.826 0.00 0.00 37.42 3.66
262 263 1.234821 TGACCTCGTGTTTTCATGGC 58.765 50.000 0.00 0.00 37.42 4.40
263 264 0.521735 GACCTCGTGTTTTCATGGCC 59.478 55.000 0.00 0.00 37.42 5.36
265 266 1.247567 CCTCGTGTTTTCATGGCCTT 58.752 50.000 3.32 0.00 37.42 4.35
266 267 1.613437 CCTCGTGTTTTCATGGCCTTT 59.387 47.619 3.32 0.00 37.42 3.11
267 268 2.607771 CCTCGTGTTTTCATGGCCTTTG 60.608 50.000 3.32 1.47 37.42 2.77
268 269 1.339610 TCGTGTTTTCATGGCCTTTGG 59.660 47.619 3.32 0.00 37.42 3.28
279 280 1.758122 GCCTTTGGCCCACCCATAG 60.758 63.158 0.00 0.00 44.89 2.23
280 281 1.758122 CCTTTGGCCCACCCATAGC 60.758 63.158 0.00 0.00 44.89 2.97
281 282 1.307647 CTTTGGCCCACCCATAGCT 59.692 57.895 0.00 0.00 44.89 3.32
283 284 1.214305 TTTGGCCCACCCATAGCTCT 61.214 55.000 0.00 0.00 44.89 4.09
284 285 1.925285 TTGGCCCACCCATAGCTCTG 61.925 60.000 0.00 0.00 44.89 3.35
285 286 2.203266 GCCCACCCATAGCTCTGC 60.203 66.667 0.00 0.00 0.00 4.26
287 288 1.449353 CCCACCCATAGCTCTGCTC 59.551 63.158 0.00 0.00 40.44 4.26
288 289 1.449353 CCACCCATAGCTCTGCTCC 59.551 63.158 0.00 0.00 40.44 4.70
289 290 1.068753 CACCCATAGCTCTGCTCCG 59.931 63.158 0.00 0.00 40.44 4.63
290 291 2.136878 ACCCATAGCTCTGCTCCGG 61.137 63.158 0.00 0.00 40.44 5.14
291 292 2.030262 CCATAGCTCTGCTCCGGC 59.970 66.667 0.00 0.00 40.44 6.13
292 293 2.030262 CATAGCTCTGCTCCGGCC 59.970 66.667 0.00 0.00 40.44 6.13
293 294 2.444706 ATAGCTCTGCTCCGGCCA 60.445 61.111 2.24 0.00 40.44 5.36
294 295 2.506061 ATAGCTCTGCTCCGGCCAG 61.506 63.158 13.82 13.82 40.44 4.85
319 320 2.881352 CGGCTCGTTCCGCTTCTC 60.881 66.667 5.31 0.00 43.18 2.87
320 321 2.574399 GGCTCGTTCCGCTTCTCT 59.426 61.111 0.00 0.00 0.00 3.10
321 322 1.807573 GGCTCGTTCCGCTTCTCTG 60.808 63.158 0.00 0.00 0.00 3.35
322 323 1.807573 GCTCGTTCCGCTTCTCTGG 60.808 63.158 0.00 0.00 0.00 3.86
323 324 1.587054 CTCGTTCCGCTTCTCTGGT 59.413 57.895 0.00 0.00 0.00 4.00
324 325 0.038159 CTCGTTCCGCTTCTCTGGTT 60.038 55.000 0.00 0.00 0.00 3.67
326 327 1.201647 TCGTTCCGCTTCTCTGGTTAG 59.798 52.381 0.00 0.00 0.00 2.34
327 328 1.736032 CGTTCCGCTTCTCTGGTTAGG 60.736 57.143 0.00 0.00 0.00 2.69
328 329 1.549170 GTTCCGCTTCTCTGGTTAGGA 59.451 52.381 0.00 0.00 0.00 2.94
329 330 1.475403 TCCGCTTCTCTGGTTAGGAG 58.525 55.000 0.00 0.00 0.00 3.69
332 333 1.205893 CGCTTCTCTGGTTAGGAGCTT 59.794 52.381 2.86 0.00 0.00 3.74
333 334 2.737039 CGCTTCTCTGGTTAGGAGCTTC 60.737 54.545 2.86 0.00 0.00 3.86
334 335 2.737039 GCTTCTCTGGTTAGGAGCTTCG 60.737 54.545 0.00 0.00 0.00 3.79
337 338 0.895530 TCTGGTTAGGAGCTTCGGTG 59.104 55.000 0.00 0.00 0.00 4.94
338 339 0.108138 CTGGTTAGGAGCTTCGGTGG 60.108 60.000 0.00 0.00 0.00 4.61
339 340 1.449778 GGTTAGGAGCTTCGGTGGC 60.450 63.158 0.00 0.00 0.00 5.01
343 344 1.971505 TAGGAGCTTCGGTGGCATGG 61.972 60.000 0.00 0.00 0.00 3.66
344 345 2.045926 GAGCTTCGGTGGCATGGT 60.046 61.111 0.00 0.00 0.00 3.55
345 346 2.360350 AGCTTCGGTGGCATGGTG 60.360 61.111 0.00 0.00 0.00 4.17
347 348 3.443045 CTTCGGTGGCATGGTGGC 61.443 66.667 0.00 0.00 44.03 5.01
348 349 3.925630 CTTCGGTGGCATGGTGGCT 62.926 63.158 5.12 0.00 44.10 4.75
349 350 4.720902 TCGGTGGCATGGTGGCTG 62.721 66.667 5.12 0.00 44.10 4.85
353 354 4.385740 TGGCATGGTGGCTGGCAT 62.386 61.111 7.33 0.00 43.37 4.40
354 355 3.845259 GGCATGGTGGCTGGCATG 61.845 66.667 7.33 2.84 40.14 4.06
357 358 2.441532 ATGGTGGCTGGCATGCTC 60.442 61.111 18.92 8.46 0.00 4.26
358 359 4.746309 TGGTGGCTGGCATGCTCC 62.746 66.667 18.92 16.20 0.00 4.70
362 363 4.575973 GGCTGGCATGCTCCGGAT 62.576 66.667 18.92 0.00 34.34 4.18
363 364 3.285215 GCTGGCATGCTCCGGATG 61.285 66.667 18.92 0.76 34.34 3.51
364 365 3.285215 CTGGCATGCTCCGGATGC 61.285 66.667 18.34 18.34 44.65 3.91
366 367 4.916293 GGCATGCTCCGGATGCGA 62.916 66.667 18.92 10.19 46.05 5.10
367 368 3.344215 GCATGCTCCGGATGCGAG 61.344 66.667 12.49 11.44 37.10 5.03
368 369 2.664185 CATGCTCCGGATGCGAGG 60.664 66.667 8.71 0.91 0.00 4.63
369 370 3.157252 ATGCTCCGGATGCGAGGT 61.157 61.111 8.71 0.00 0.00 3.85
370 371 3.451556 ATGCTCCGGATGCGAGGTG 62.452 63.158 8.71 0.00 0.00 4.00
371 372 3.838271 GCTCCGGATGCGAGGTGA 61.838 66.667 8.71 0.00 0.00 4.02
372 373 2.415010 CTCCGGATGCGAGGTGAG 59.585 66.667 8.71 1.81 0.00 3.51
373 374 3.144120 CTCCGGATGCGAGGTGAGG 62.144 68.421 8.71 0.00 0.00 3.86
374 375 3.147595 CCGGATGCGAGGTGAGGA 61.148 66.667 8.71 0.00 0.00 3.71
375 376 2.415010 CGGATGCGAGGTGAGGAG 59.585 66.667 0.00 0.00 0.00 3.69
376 377 2.818132 GGATGCGAGGTGAGGAGG 59.182 66.667 0.00 0.00 0.00 4.30
377 378 2.107953 GATGCGAGGTGAGGAGGC 59.892 66.667 0.00 0.00 0.00 4.70
378 379 2.685017 ATGCGAGGTGAGGAGGCA 60.685 61.111 0.00 0.00 38.09 4.75
379 380 2.914777 GATGCGAGGTGAGGAGGCAC 62.915 65.000 0.00 0.00 36.31 5.01
392 393 2.909965 GGCACTGCCGGGTGAAAA 60.910 61.111 14.27 0.00 39.62 2.29
393 394 2.335011 GCACTGCCGGGTGAAAAC 59.665 61.111 14.27 0.00 39.34 2.43
394 395 2.193536 GCACTGCCGGGTGAAAACT 61.194 57.895 14.27 0.00 39.34 2.66
395 396 1.949257 CACTGCCGGGTGAAAACTC 59.051 57.895 2.18 0.00 39.34 3.01
396 397 0.817634 CACTGCCGGGTGAAAACTCA 60.818 55.000 2.18 0.00 39.34 3.41
397 398 0.535102 ACTGCCGGGTGAAAACTCAG 60.535 55.000 2.18 0.35 0.00 3.35
400 401 1.566018 GCCGGGTGAAAACTCAGTCG 61.566 60.000 2.18 0.00 0.00 4.18
401 402 0.032952 CCGGGTGAAAACTCAGTCGA 59.967 55.000 0.00 0.00 0.00 4.20
402 403 1.137513 CGGGTGAAAACTCAGTCGAC 58.862 55.000 7.70 7.70 0.00 4.20
404 405 1.137513 GGTGAAAACTCAGTCGACGG 58.862 55.000 10.46 10.03 0.00 4.79
405 406 0.507358 GTGAAAACTCAGTCGACGGC 59.493 55.000 11.11 0.00 0.00 5.68
406 407 0.937699 TGAAAACTCAGTCGACGGCG 60.938 55.000 2.87 2.87 39.35 6.46
422 423 4.720902 CGATGCCTGTGGGTGCCA 62.721 66.667 0.00 0.00 34.45 4.92
428 429 0.320683 GCCTGTGGGTGCCATTTTTC 60.321 55.000 0.00 0.00 35.28 2.29
430 431 1.273327 CCTGTGGGTGCCATTTTTCTC 59.727 52.381 0.00 0.00 35.28 2.87
431 432 1.962807 CTGTGGGTGCCATTTTTCTCA 59.037 47.619 0.00 0.00 35.28 3.27
432 433 2.364970 CTGTGGGTGCCATTTTTCTCAA 59.635 45.455 0.00 0.00 35.28 3.02
434 435 1.339610 TGGGTGCCATTTTTCTCAACG 59.660 47.619 0.00 0.00 0.00 4.10
435 436 1.336795 GGGTGCCATTTTTCTCAACGG 60.337 52.381 0.00 0.00 0.00 4.44
436 437 1.336795 GGTGCCATTTTTCTCAACGGG 60.337 52.381 0.00 0.00 0.00 5.28
438 439 0.246360 GCCATTTTTCTCAACGGGGG 59.754 55.000 0.00 0.00 0.00 5.40
452 453 2.274104 GGGGGCGTTAGATTGGCA 59.726 61.111 0.00 0.00 0.00 4.92
455 456 0.385390 GGGGCGTTAGATTGGCATTG 59.615 55.000 0.00 0.00 0.00 2.82
456 457 1.102978 GGGCGTTAGATTGGCATTGT 58.897 50.000 0.00 0.00 0.00 2.71
457 458 1.065551 GGGCGTTAGATTGGCATTGTC 59.934 52.381 0.00 0.00 0.00 3.18
458 459 2.017049 GGCGTTAGATTGGCATTGTCT 58.983 47.619 0.00 0.00 0.00 3.41
460 461 3.487544 GGCGTTAGATTGGCATTGTCTTC 60.488 47.826 3.42 0.00 0.00 2.87
461 462 3.487544 GCGTTAGATTGGCATTGTCTTCC 60.488 47.826 3.42 0.00 0.00 3.46
462 463 3.941483 CGTTAGATTGGCATTGTCTTCCT 59.059 43.478 3.42 0.00 0.00 3.36
463 464 4.034510 CGTTAGATTGGCATTGTCTTCCTC 59.965 45.833 3.42 0.00 0.00 3.71
464 465 3.010200 AGATTGGCATTGTCTTCCTCC 57.990 47.619 0.00 0.00 0.00 4.30
465 466 2.027385 GATTGGCATTGTCTTCCTCCC 58.973 52.381 0.00 0.00 0.00 4.30
466 467 0.039618 TTGGCATTGTCTTCCTCCCC 59.960 55.000 0.00 0.00 0.00 4.81
469 470 0.106967 GCATTGTCTTCCTCCCCTCC 60.107 60.000 0.00 0.00 0.00 4.30
470 471 1.589414 CATTGTCTTCCTCCCCTCCT 58.411 55.000 0.00 0.00 0.00 3.69
473 474 1.362224 TGTCTTCCTCCCCTCCTTTG 58.638 55.000 0.00 0.00 0.00 2.77
474 475 1.363246 GTCTTCCTCCCCTCCTTTGT 58.637 55.000 0.00 0.00 0.00 2.83
475 476 1.003696 GTCTTCCTCCCCTCCTTTGTG 59.996 57.143 0.00 0.00 0.00 3.33
476 477 0.329596 CTTCCTCCCCTCCTTTGTGG 59.670 60.000 0.00 0.00 37.10 4.17
477 478 0.402861 TTCCTCCCCTCCTTTGTGGT 60.403 55.000 0.00 0.00 37.07 4.16
478 479 0.840722 TCCTCCCCTCCTTTGTGGTC 60.841 60.000 0.00 0.00 37.07 4.02
479 480 0.842467 CCTCCCCTCCTTTGTGGTCT 60.842 60.000 0.00 0.00 37.07 3.85
480 481 0.326264 CTCCCCTCCTTTGTGGTCTG 59.674 60.000 0.00 0.00 37.07 3.51
481 482 0.401395 TCCCCTCCTTTGTGGTCTGT 60.401 55.000 0.00 0.00 37.07 3.41
482 483 0.478507 CCCCTCCTTTGTGGTCTGTT 59.521 55.000 0.00 0.00 37.07 3.16
483 484 1.545651 CCCCTCCTTTGTGGTCTGTTC 60.546 57.143 0.00 0.00 37.07 3.18
485 486 1.421646 CCTCCTTTGTGGTCTGTTCCT 59.578 52.381 0.00 0.00 37.07 3.36
486 487 2.498167 CTCCTTTGTGGTCTGTTCCTG 58.502 52.381 0.00 0.00 37.07 3.86
489 490 1.142870 CTTTGTGGTCTGTTCCTGGGA 59.857 52.381 0.00 0.00 0.00 4.37
491 492 0.105194 TGTGGTCTGTTCCTGGGAGA 60.105 55.000 0.00 0.00 0.00 3.71
495 496 2.305927 TGGTCTGTTCCTGGGAGAAATC 59.694 50.000 0.00 0.00 0.00 2.17
509 510 5.059134 GGAGAAATCCCAGATCCAGAAAT 57.941 43.478 0.00 0.00 0.00 2.17
510 511 5.069318 GGAGAAATCCCAGATCCAGAAATC 58.931 45.833 0.00 0.00 0.00 2.17
513 514 6.305411 AGAAATCCCAGATCCAGAAATCATC 58.695 40.000 0.00 0.00 0.00 2.92
514 515 4.654389 ATCCCAGATCCAGAAATCATCC 57.346 45.455 0.00 0.00 0.00 3.51
515 516 3.673343 TCCCAGATCCAGAAATCATCCT 58.327 45.455 0.00 0.00 0.00 3.24
516 517 4.050037 TCCCAGATCCAGAAATCATCCTT 58.950 43.478 0.00 0.00 0.00 3.36
517 518 4.479796 TCCCAGATCCAGAAATCATCCTTT 59.520 41.667 0.00 0.00 0.00 3.11
518 519 5.043881 TCCCAGATCCAGAAATCATCCTTTT 60.044 40.000 0.00 0.00 0.00 2.27
519 520 5.659971 CCCAGATCCAGAAATCATCCTTTTT 59.340 40.000 0.00 0.00 0.00 1.94
520 521 6.183360 CCCAGATCCAGAAATCATCCTTTTTC 60.183 42.308 0.00 0.00 33.08 2.29
521 522 6.606395 CCAGATCCAGAAATCATCCTTTTTCT 59.394 38.462 0.00 0.00 41.61 2.52
555 556 9.709495 AAATCATTGTTATGTGTAAAAGTGCAT 57.291 25.926 0.00 0.00 33.34 3.96
559 560 8.586273 CATTGTTATGTGTAAAAGTGCATTAGC 58.414 33.333 0.00 0.00 42.57 3.09
572 573 2.446435 GCATTAGCAACTCTTTCCCCA 58.554 47.619 0.00 0.00 41.58 4.96
573 574 2.164422 GCATTAGCAACTCTTTCCCCAC 59.836 50.000 0.00 0.00 41.58 4.61
575 576 3.806949 TTAGCAACTCTTTCCCCACAT 57.193 42.857 0.00 0.00 0.00 3.21
576 577 1.915141 AGCAACTCTTTCCCCACATG 58.085 50.000 0.00 0.00 0.00 3.21
578 579 2.158475 AGCAACTCTTTCCCCACATGAA 60.158 45.455 0.00 0.00 0.00 2.57
579 580 2.229784 GCAACTCTTTCCCCACATGAAG 59.770 50.000 0.00 0.00 0.00 3.02
587 588 2.790433 TCCCCACATGAAGTTAAGCAC 58.210 47.619 0.00 0.00 0.00 4.40
601 602 5.166398 AGTTAAGCACAATGGTACGTAGTC 58.834 41.667 0.00 0.00 43.93 2.59
650 651 9.681062 CATCCTACTATTTCCTTTTGGTAAAGA 57.319 33.333 0.00 0.00 42.78 2.52
652 653 9.734984 TCCTACTATTTCCTTTTGGTAAAGAAG 57.265 33.333 0.00 0.00 42.78 2.85
653 654 9.516546 CCTACTATTTCCTTTTGGTAAAGAAGT 57.483 33.333 0.00 0.00 42.78 3.01
656 657 8.638873 ACTATTTCCTTTTGGTAAAGAAGTTGG 58.361 33.333 0.00 0.00 42.78 3.77
657 658 6.860790 TTTCCTTTTGGTAAAGAAGTTGGT 57.139 33.333 0.00 0.00 42.78 3.67
658 659 7.957992 TTTCCTTTTGGTAAAGAAGTTGGTA 57.042 32.000 0.00 0.00 42.78 3.25
659 660 7.576861 TTCCTTTTGGTAAAGAAGTTGGTAG 57.423 36.000 0.00 0.00 42.78 3.18
660 661 6.665695 TCCTTTTGGTAAAGAAGTTGGTAGT 58.334 36.000 0.00 0.00 42.78 2.73
661 662 6.544564 TCCTTTTGGTAAAGAAGTTGGTAGTG 59.455 38.462 0.00 0.00 42.78 2.74
664 665 4.131596 TGGTAAAGAAGTTGGTAGTGTGC 58.868 43.478 0.00 0.00 0.00 4.57
665 666 4.131596 GGTAAAGAAGTTGGTAGTGTGCA 58.868 43.478 0.00 0.00 0.00 4.57
667 668 5.240844 GGTAAAGAAGTTGGTAGTGTGCATT 59.759 40.000 0.00 0.00 0.00 3.56
668 669 6.428771 GGTAAAGAAGTTGGTAGTGTGCATTA 59.571 38.462 0.00 0.00 0.00 1.90
670 671 5.941948 AGAAGTTGGTAGTGTGCATTAAC 57.058 39.130 0.00 0.00 0.00 2.01
671 672 5.621193 AGAAGTTGGTAGTGTGCATTAACT 58.379 37.500 0.00 0.00 0.00 2.24
672 673 5.701290 AGAAGTTGGTAGTGTGCATTAACTC 59.299 40.000 3.25 0.00 0.00 3.01
673 674 5.228945 AGTTGGTAGTGTGCATTAACTCT 57.771 39.130 3.25 0.00 0.00 3.24
674 675 6.354794 AGTTGGTAGTGTGCATTAACTCTA 57.645 37.500 3.25 0.00 0.00 2.43
675 676 6.164176 AGTTGGTAGTGTGCATTAACTCTAC 58.836 40.000 3.25 4.77 42.41 2.59
679 680 6.662234 TGGTAGTGTGCATTAACTCTACTACT 59.338 38.462 13.26 0.00 42.60 2.57
680 681 7.830697 TGGTAGTGTGCATTAACTCTACTACTA 59.169 37.037 13.26 0.00 42.60 1.82
681 682 8.127954 GGTAGTGTGCATTAACTCTACTACTAC 58.872 40.741 13.26 0.00 42.60 2.73
684 685 8.407064 AGTGTGCATTAACTCTACTACTACATC 58.593 37.037 0.00 0.00 0.00 3.06
686 687 8.745590 TGTGCATTAACTCTACTACTACATCAA 58.254 33.333 0.00 0.00 0.00 2.57
687 688 9.239002 GTGCATTAACTCTACTACTACATCAAG 57.761 37.037 0.00 0.00 0.00 3.02
689 690 9.804758 GCATTAACTCTACTACTACATCAAGTT 57.195 33.333 0.00 0.00 0.00 2.66
693 694 7.571080 ACTCTACTACTACATCAAGTTAGGC 57.429 40.000 0.00 0.00 0.00 3.93
694 695 7.117397 ACTCTACTACTACATCAAGTTAGGCA 58.883 38.462 0.00 0.00 0.00 4.75
695 696 7.780745 ACTCTACTACTACATCAAGTTAGGCAT 59.219 37.037 0.00 0.00 0.00 4.40
696 697 9.286170 CTCTACTACTACATCAAGTTAGGCATA 57.714 37.037 0.00 0.00 0.00 3.14
697 698 9.809395 TCTACTACTACATCAAGTTAGGCATAT 57.191 33.333 0.00 0.00 0.00 1.78
703 704 6.445451 ACATCAAGTTAGGCATATCCTCAT 57.555 37.500 0.00 0.00 43.20 2.90
704 705 6.845908 ACATCAAGTTAGGCATATCCTCATT 58.154 36.000 0.00 0.00 43.20 2.57
786 1234 6.314400 GCAAGTAACACCGTCCTTTAATCATA 59.686 38.462 0.00 0.00 0.00 2.15
815 1263 4.580868 TCATACCATGTCGCTTTAACCAA 58.419 39.130 0.00 0.00 0.00 3.67
819 1267 2.923020 CCATGTCGCTTTAACCAAATGC 59.077 45.455 0.00 0.00 35.45 3.56
843 1315 7.011857 TGCTGCAATAATCACGTGATAATACAA 59.988 33.333 30.16 14.44 33.73 2.41
869 1681 7.725844 ACAAGAAAGGAATGTGGATAAGAAAGT 59.274 33.333 0.00 0.00 0.00 2.66
879 1691 3.243434 TGGATAAGAAAGTCGATCTCGCC 60.243 47.826 0.00 0.00 39.60 5.54
923 1738 7.829725 TGCTCATGCATACAAAGAACTAATTT 58.170 30.769 0.00 0.00 45.31 1.82
933 1748 7.203255 ACAAAGAACTAATTTAGAGGCACAC 57.797 36.000 10.39 0.00 0.00 3.82
967 1782 7.124599 TGTGTAGCTATTAAGGTAGGTAAGCAA 59.875 37.037 0.00 0.00 36.68 3.91
968 1783 7.652507 GTGTAGCTATTAAGGTAGGTAAGCAAG 59.347 40.741 0.00 0.00 36.68 4.01
969 1784 6.176014 AGCTATTAAGGTAGGTAAGCAAGG 57.824 41.667 0.00 0.00 31.09 3.61
970 1785 5.666265 AGCTATTAAGGTAGGTAAGCAAGGT 59.334 40.000 0.00 0.00 31.09 3.50
973 1788 3.908643 AAGGTAGGTAAGCAAGGTAGC 57.091 47.619 0.00 0.00 0.00 3.58
985 1800 5.307544 AGCAAGGTAGCTAGCTAGTACTA 57.692 43.478 24.78 12.44 44.50 1.82
995 1810 5.357596 AGCTAGCTAGTACTACACTTGGTTC 59.642 44.000 17.69 0.00 40.45 3.62
1084 1950 0.445436 GAGATGGTTGAAGCACTGCG 59.555 55.000 0.00 0.00 0.00 5.18
1100 1966 1.231958 TGCGTTTTCCGTGTCCCATC 61.232 55.000 0.00 0.00 39.32 3.51
1107 1973 3.118454 CGTGTCCCATCGCGCTTT 61.118 61.111 5.56 0.00 34.73 3.51
1119 1985 0.381801 CGCGCTTTAAGATGGCCATT 59.618 50.000 21.84 8.45 0.00 3.16
1120 1986 1.601903 CGCGCTTTAAGATGGCCATTA 59.398 47.619 21.84 7.26 0.00 1.90
1192 2059 8.588290 ACCTACATTCTTGTGCCATTAATTTA 57.412 30.769 0.00 0.00 36.53 1.40
1194 2061 9.301153 CCTACATTCTTGTGCCATTAATTTAAC 57.699 33.333 0.00 0.00 36.53 2.01
1197 2064 9.423061 ACATTCTTGTGCCATTAATTTAACTTC 57.577 29.630 0.00 0.00 33.85 3.01
1298 2191 0.028770 TAGCGTTGTTGTTGCAGTGC 59.971 50.000 8.58 8.58 0.00 4.40
1307 2200 4.322567 TGTTGTTGCAGTGCTCATGTATA 58.677 39.130 17.60 0.00 0.00 1.47
1313 2206 8.538409 TGTTGCAGTGCTCATGTATATTATAG 57.462 34.615 17.60 0.00 0.00 1.31
1550 2470 2.126031 GAAGAGGTGGCCGACGAC 60.126 66.667 0.00 0.00 0.00 4.34
1578 2498 1.755384 GCCTACATGGACCTAGGCC 59.245 63.158 17.40 11.95 46.60 5.19
1619 2539 1.742308 ACAGGGGCAAGTTCCTAGAA 58.258 50.000 0.00 0.00 0.00 2.10
1670 2590 0.326264 AGGTGATGAGGACAGTTGCC 59.674 55.000 0.00 0.00 0.00 4.52
1676 2596 2.360350 AGGACAGTTGCCGCCATG 60.360 61.111 0.00 0.00 0.00 3.66
1680 2600 0.657840 GACAGTTGCCGCCATGTATC 59.342 55.000 0.00 0.00 0.00 2.24
1711 2631 1.153588 CCATTTTCATGGCCGTGGC 60.154 57.895 24.78 1.16 43.95 5.01
1747 2667 1.664649 CCGTCTTCAGCAAGCACGA 60.665 57.895 3.83 0.00 36.26 4.35
1751 2671 2.349817 CGTCTTCAGCAAGCACGAAATT 60.350 45.455 0.00 0.00 36.26 1.82
1791 2711 1.360931 CCAACGCGACATGCTCATGA 61.361 55.000 15.93 0.00 43.27 3.07
1818 2738 1.494721 ACCAACTCCCACTGATGTTGT 59.505 47.619 0.00 0.00 38.35 3.32
1838 2758 0.391661 TCCAGAAGATCGTTGCAGCC 60.392 55.000 0.00 0.00 0.00 4.85
1844 2764 1.880340 GATCGTTGCAGCCGAGGAG 60.880 63.158 14.56 0.00 37.81 3.69
1860 2780 1.301954 GAGGGCAAACCACCGGTAT 59.698 57.895 6.87 0.00 43.89 2.73
1920 2993 5.369833 TCCTCCAAAAAGATAAACACGACA 58.630 37.500 0.00 0.00 0.00 4.35
1932 3005 6.657541 AGATAAACACGACAATAAATGGGTGT 59.342 34.615 0.00 2.91 46.33 4.16
1989 3094 3.137544 TGGTGCTTAAGTTCCTGGAAAGA 59.862 43.478 11.40 0.00 0.00 2.52
1997 3102 5.574970 AAGTTCCTGGAAAGAGAAGATGT 57.425 39.130 11.40 0.00 0.00 3.06
2031 3139 1.686110 CCTAGGACTCCACCCGCTT 60.686 63.158 1.05 0.00 0.00 4.68
2040 3148 1.414181 CTCCACCCGCTTGACATCTAT 59.586 52.381 0.00 0.00 0.00 1.98
2080 3201 1.452108 GGGATGAAGACAAGGGGCG 60.452 63.158 0.00 0.00 0.00 6.13
2095 3216 1.665442 GGCGACAAACAAGGGCAAT 59.335 52.632 0.00 0.00 0.00 3.56
2212 3333 9.173939 CTCATGAAGTTTACAACACAAAATCTC 57.826 33.333 0.00 0.00 0.00 2.75
2235 3356 6.382087 TCATAACTTAGGCCTCCTCAAGATA 58.618 40.000 18.03 11.63 34.61 1.98
2249 3370 4.400251 CCTCAAGATAAAAAGCTGGATGCA 59.600 41.667 0.00 0.00 45.94 3.96
2253 3374 6.153170 TCAAGATAAAAAGCTGGATGCATTCA 59.847 34.615 7.63 7.63 45.94 2.57
2267 3389 0.101759 CATTCATGCTTCAAGGCCCG 59.898 55.000 0.00 0.00 0.00 6.13
2274 3396 1.978617 CTTCAAGGCCCGCCAACAT 60.979 57.895 8.74 0.00 38.92 2.71
2303 3425 2.593956 GGGACAGGGGTGTGGAGAC 61.594 68.421 0.00 0.00 0.00 3.36
2317 3439 2.039624 AGACAGAGACCGGGGCAT 59.960 61.111 6.32 0.00 0.00 4.40
2331 3453 2.435938 GCATCGCGTCTTCCCCAA 60.436 61.111 5.77 0.00 0.00 4.12
2391 3513 0.957888 GGAAGTTGTCTGAGGCAGGC 60.958 60.000 0.00 0.00 36.52 4.85
2396 3518 0.401356 TTGTCTGAGGCAGGCATTCA 59.599 50.000 2.26 0.00 45.75 2.57
2571 3699 0.996229 CGGCGTACGTGTTGTTCGTA 60.996 55.000 17.90 0.00 42.57 3.43
2590 3718 1.358152 AAAGGACCTCGTGGATTCCA 58.642 50.000 11.17 0.00 32.53 3.53
2650 3780 1.374125 CATGACCTTGCCGACGACA 60.374 57.895 0.00 0.00 0.00 4.35
2715 3845 3.385433 TGTACAAGAACCGGAAGAGTCAA 59.615 43.478 9.46 0.00 0.00 3.18
2741 3871 1.746615 GCGTGCATGATGACCTGGT 60.747 57.895 10.93 0.00 0.00 4.00
2795 3928 2.431942 GTACGAGTGGTGGGCACG 60.432 66.667 0.00 0.00 0.00 5.34
2813 3946 1.477295 ACGCCTTAGGAGCAAGTACTC 59.523 52.381 0.69 0.00 35.86 2.59
2849 3982 2.750350 CCTTGCCCTTCTCACCGT 59.250 61.111 0.00 0.00 0.00 4.83
2975 4167 1.879380 TCTTGTCGCATTGTTTCCCAG 59.121 47.619 0.00 0.00 0.00 4.45
3043 4609 1.713830 GCACGGTGCTTATTCGGTC 59.286 57.895 25.08 0.00 40.96 4.79
3079 4645 6.257423 TCGATGCACATTGTTATGATGTTTC 58.743 36.000 0.00 0.00 35.64 2.78
3333 5794 4.176752 GCGCTTCCCTCCCCGATT 62.177 66.667 0.00 0.00 0.00 3.34
3338 5799 1.749334 CTTCCCTCCCCGATTCCTCG 61.749 65.000 0.00 0.00 44.62 4.63
3355 5818 1.068250 CGCCGATTCTTCCTCCTCC 59.932 63.158 0.00 0.00 0.00 4.30
3356 5819 1.395826 CGCCGATTCTTCCTCCTCCT 61.396 60.000 0.00 0.00 0.00 3.69
3357 5820 0.391228 GCCGATTCTTCCTCCTCCTC 59.609 60.000 0.00 0.00 0.00 3.71
3358 5821 1.044611 CCGATTCTTCCTCCTCCTCC 58.955 60.000 0.00 0.00 0.00 4.30
3359 5822 1.412361 CCGATTCTTCCTCCTCCTCCT 60.412 57.143 0.00 0.00 0.00 3.69
3360 5823 1.960689 CGATTCTTCCTCCTCCTCCTC 59.039 57.143 0.00 0.00 0.00 3.71
3361 5824 2.325484 GATTCTTCCTCCTCCTCCTCC 58.675 57.143 0.00 0.00 0.00 4.30
3362 5825 1.398799 TTCTTCCTCCTCCTCCTCCT 58.601 55.000 0.00 0.00 0.00 3.69
3363 5826 0.930726 TCTTCCTCCTCCTCCTCCTC 59.069 60.000 0.00 0.00 0.00 3.71
3390 5853 3.956848 CCCAAATCCATCCTCTTTCCTTC 59.043 47.826 0.00 0.00 0.00 3.46
3415 5878 2.288886 CCGATTATCTTCTTCCGACCCC 60.289 54.545 0.00 0.00 0.00 4.95
3449 5938 2.038659 CACTCCAGATCTTCCTCCTCC 58.961 57.143 0.00 0.00 0.00 4.30
3452 5941 1.219213 TCCAGATCTTCCTCCTCCTCC 59.781 57.143 0.00 0.00 0.00 4.30
3454 5943 0.187361 AGATCTTCCTCCTCCTCCGG 59.813 60.000 0.00 0.00 0.00 5.14
3455 5944 0.186386 GATCTTCCTCCTCCTCCGGA 59.814 60.000 2.93 2.93 0.00 5.14
3457 5946 0.637195 TCTTCCTCCTCCTCCGGATT 59.363 55.000 3.57 0.00 31.43 3.01
3458 5947 0.755686 CTTCCTCCTCCTCCGGATTG 59.244 60.000 3.57 0.00 31.43 2.67
3460 5949 2.419198 CTCCTCCTCCGGATTGCG 59.581 66.667 3.57 0.00 31.43 4.85
3461 5950 3.798954 CTCCTCCTCCGGATTGCGC 62.799 68.421 3.57 0.00 31.43 6.09
3464 5953 3.798954 CTCCTCCGGATTGCGCTCC 62.799 68.421 3.57 7.38 0.00 4.70
3675 6190 2.685534 CCCGTTCCAGGCCCCATTA 61.686 63.158 0.00 0.00 0.00 1.90
3739 6266 0.179150 CGCCGTCAGAGAAGAAGAGG 60.179 60.000 0.00 0.00 0.00 3.69
3765 6292 3.462678 GACGACCAGGAGCCTCCC 61.463 72.222 7.26 0.00 37.19 4.30
3886 6471 2.402572 GCGGCAAAGAAGGAGGAGC 61.403 63.158 0.00 0.00 0.00 4.70
3937 6929 3.649277 CTCCTCAACCAGACGGCGG 62.649 68.421 13.24 0.00 34.57 6.13
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 4.354162 GGTAGGGGTTGCCCGCAA 62.354 66.667 0.00 0.00 46.66 4.85
23 24 2.939353 ACCAGGGTAGGGGTTGCC 60.939 66.667 0.00 0.00 32.12 4.52
24 25 2.355115 CACCAGGGTAGGGGTTGC 59.645 66.667 0.00 0.00 34.45 4.17
25 26 1.378762 CACACCAGGGTAGGGGTTG 59.621 63.158 0.00 0.00 44.84 3.77
26 27 2.535331 GCACACCAGGGTAGGGGTT 61.535 63.158 0.00 0.00 44.84 4.11
28 29 2.610859 AGCACACCAGGGTAGGGG 60.611 66.667 0.00 0.00 38.34 4.79
29 30 1.613630 AGAGCACACCAGGGTAGGG 60.614 63.158 0.00 0.00 0.00 3.53
30 31 0.904865 TGAGAGCACACCAGGGTAGG 60.905 60.000 0.00 0.00 0.00 3.18
31 32 0.247736 GTGAGAGCACACCAGGGTAG 59.752 60.000 0.00 0.00 44.51 3.18
32 33 1.532604 CGTGAGAGCACACCAGGGTA 61.533 60.000 0.00 0.00 45.41 3.69
33 34 2.872388 CGTGAGAGCACACCAGGGT 61.872 63.158 0.00 0.00 45.41 4.34
35 36 2.047844 CCGTGAGAGCACACCAGG 60.048 66.667 0.00 0.00 45.41 4.45
36 37 2.740055 GCCGTGAGAGCACACCAG 60.740 66.667 0.00 0.00 45.41 4.00
37 38 1.540435 TATGCCGTGAGAGCACACCA 61.540 55.000 0.00 0.00 45.41 4.17
38 39 0.179073 ATATGCCGTGAGAGCACACC 60.179 55.000 0.00 0.00 45.41 4.16
39 40 1.212616 GATATGCCGTGAGAGCACAC 58.787 55.000 0.00 0.00 45.41 3.82
41 42 0.390860 AGGATATGCCGTGAGAGCAC 59.609 55.000 0.00 0.00 44.40 4.40
42 43 0.676184 GAGGATATGCCGTGAGAGCA 59.324 55.000 0.00 0.00 45.94 4.26
44 45 0.605589 GGGAGGATATGCCGTGAGAG 59.394 60.000 0.00 0.00 43.43 3.20
45 46 0.188587 AGGGAGGATATGCCGTGAGA 59.811 55.000 0.00 0.00 46.07 3.27
46 47 0.319728 CAGGGAGGATATGCCGTGAG 59.680 60.000 0.00 0.00 46.07 3.51
47 48 1.758440 GCAGGGAGGATATGCCGTGA 61.758 60.000 0.00 0.00 46.07 4.35
48 49 1.302033 GCAGGGAGGATATGCCGTG 60.302 63.158 0.00 0.00 46.07 4.94
52 53 2.759795 GGGGCAGGGAGGATATGC 59.240 66.667 0.00 0.00 39.25 3.14
53 54 2.596851 CCGGGGCAGGGAGGATATG 61.597 68.421 0.00 0.00 0.00 1.78
74 75 2.605823 CGACTCAGATATGGCCGAAGAC 60.606 54.545 0.00 0.00 0.00 3.01
77 78 1.067060 CACGACTCAGATATGGCCGAA 59.933 52.381 0.00 0.00 0.00 4.30
78 79 0.668535 CACGACTCAGATATGGCCGA 59.331 55.000 0.00 0.00 0.00 5.54
81 82 1.863454 CAAGCACGACTCAGATATGGC 59.137 52.381 0.00 0.00 0.00 4.40
83 84 1.863454 GCCAAGCACGACTCAGATATG 59.137 52.381 0.00 0.00 0.00 1.78
84 85 1.202580 GGCCAAGCACGACTCAGATAT 60.203 52.381 0.00 0.00 0.00 1.63
88 89 3.114616 CGGCCAAGCACGACTCAG 61.115 66.667 2.24 0.00 0.00 3.35
90 91 4.681978 ACCGGCCAAGCACGACTC 62.682 66.667 0.00 0.00 0.00 3.36
98 99 4.954970 ACACCTGCACCGGCCAAG 62.955 66.667 0.00 0.00 40.13 3.61
108 109 3.982241 GCCACCTTGCACACCTGC 61.982 66.667 0.00 0.00 44.52 4.85
110 111 4.603535 GGGCCACCTTGCACACCT 62.604 66.667 4.39 0.00 33.82 4.00
125 126 2.666190 CACACGTGACAGCAGGGG 60.666 66.667 25.01 0.00 39.17 4.79
126 127 3.349006 GCACACGTGACAGCAGGG 61.349 66.667 25.01 0.00 34.31 4.45
127 128 3.705638 CGCACACGTGACAGCAGG 61.706 66.667 25.01 7.60 36.05 4.85
128 129 4.360027 GCGCACACGTGACAGCAG 62.360 66.667 25.01 17.70 42.83 4.24
131 132 4.969196 AGGGCGCACACGTGACAG 62.969 66.667 25.01 13.15 42.83 3.51
136 137 4.760047 GATGGAGGGCGCACACGT 62.760 66.667 14.57 5.40 42.83 4.49
143 144 3.470888 AAGACGGGATGGAGGGCG 61.471 66.667 0.00 0.00 0.00 6.13
144 145 2.190578 CAAGACGGGATGGAGGGC 59.809 66.667 0.00 0.00 0.00 5.19
145 146 2.190578 GCAAGACGGGATGGAGGG 59.809 66.667 0.00 0.00 0.00 4.30
146 147 1.153289 CAGCAAGACGGGATGGAGG 60.153 63.158 0.00 0.00 0.00 4.30
147 148 1.153289 CCAGCAAGACGGGATGGAG 60.153 63.158 0.00 0.00 44.45 3.86
148 149 2.989639 CCAGCAAGACGGGATGGA 59.010 61.111 0.00 0.00 44.45 3.41
149 150 2.825836 GCCAGCAAGACGGGATGG 60.826 66.667 0.00 0.00 44.49 3.51
150 151 2.825836 GGCCAGCAAGACGGGATG 60.826 66.667 0.00 0.00 35.22 3.51
151 152 4.115199 GGGCCAGCAAGACGGGAT 62.115 66.667 4.39 0.00 35.22 3.85
169 170 1.056660 ATGGATATGGACACCGGGTC 58.943 55.000 6.32 10.58 46.20 4.46
170 171 1.142870 CAATGGATATGGACACCGGGT 59.857 52.381 6.32 0.00 0.00 5.28
171 172 1.545428 CCAATGGATATGGACACCGGG 60.545 57.143 6.32 0.00 40.56 5.73
172 173 1.896220 CCAATGGATATGGACACCGG 58.104 55.000 0.00 0.00 40.56 5.28
173 174 1.238439 GCCAATGGATATGGACACCG 58.762 55.000 2.05 0.00 40.56 4.94
174 175 1.238439 CGCCAATGGATATGGACACC 58.762 55.000 2.05 0.00 40.56 4.16
178 179 0.537143 GTGCCGCCAATGGATATGGA 60.537 55.000 2.05 0.00 40.56 3.41
179 180 1.526575 GGTGCCGCCAATGGATATGG 61.527 60.000 2.05 0.00 41.08 2.74
180 181 0.538057 AGGTGCCGCCAATGGATATG 60.538 55.000 2.05 0.00 40.61 1.78
181 182 0.250901 GAGGTGCCGCCAATGGATAT 60.251 55.000 2.05 0.00 40.61 1.63
182 183 1.148273 GAGGTGCCGCCAATGGATA 59.852 57.895 2.05 0.00 40.61 2.59
184 185 4.424711 GGAGGTGCCGCCAATGGA 62.425 66.667 2.05 0.00 40.61 3.41
186 187 3.042733 TAGGGAGGTGCCGCCAATG 62.043 63.158 12.88 0.00 40.61 2.82
187 188 2.690881 TAGGGAGGTGCCGCCAAT 60.691 61.111 12.88 3.64 40.61 3.16
188 189 3.712907 GTAGGGAGGTGCCGCCAA 61.713 66.667 12.88 0.00 40.61 4.52
193 194 4.162690 CCGCTGTAGGGAGGTGCC 62.163 72.222 0.00 0.00 0.00 5.01
194 195 4.840005 GCCGCTGTAGGGAGGTGC 62.840 72.222 0.00 0.00 0.00 5.01
195 196 4.162690 GGCCGCTGTAGGGAGGTG 62.163 72.222 0.00 0.00 0.00 4.00
196 197 3.925914 AAGGCCGCTGTAGGGAGGT 62.926 63.158 0.00 0.00 0.00 3.85
197 198 3.083997 AAGGCCGCTGTAGGGAGG 61.084 66.667 0.00 0.00 0.00 4.30
198 199 2.501610 GAAGGCCGCTGTAGGGAG 59.498 66.667 0.00 0.00 0.00 4.30
199 200 3.081409 GGAAGGCCGCTGTAGGGA 61.081 66.667 0.00 0.00 0.00 4.20
237 238 1.060698 GAAAACACGAGGTCATAGCGC 59.939 52.381 0.00 0.00 0.00 5.92
240 241 3.063997 GCCATGAAAACACGAGGTCATAG 59.936 47.826 0.00 0.00 0.00 2.23
243 244 1.234821 GCCATGAAAACACGAGGTCA 58.765 50.000 0.00 0.00 0.00 4.02
246 247 1.247567 AAGGCCATGAAAACACGAGG 58.752 50.000 5.01 0.00 0.00 4.63
247 248 2.607771 CCAAAGGCCATGAAAACACGAG 60.608 50.000 5.01 0.00 0.00 4.18
248 249 1.339610 CCAAAGGCCATGAAAACACGA 59.660 47.619 5.01 0.00 0.00 4.35
249 250 1.782044 CCAAAGGCCATGAAAACACG 58.218 50.000 5.01 0.00 0.00 4.49
250 251 1.511850 GCCAAAGGCCATGAAAACAC 58.488 50.000 5.01 0.00 44.06 3.32
262 263 1.758122 GCTATGGGTGGGCCAAAGG 60.758 63.158 8.40 0.00 36.17 3.11
263 264 0.753111 GAGCTATGGGTGGGCCAAAG 60.753 60.000 8.40 2.04 36.17 2.77
265 266 1.619363 AGAGCTATGGGTGGGCCAA 60.619 57.895 8.40 0.00 36.17 4.52
266 267 2.042762 AGAGCTATGGGTGGGCCA 59.957 61.111 0.00 0.00 36.17 5.36
267 268 2.512896 CAGAGCTATGGGTGGGCC 59.487 66.667 0.00 0.00 0.00 5.80
268 269 2.203266 GCAGAGCTATGGGTGGGC 60.203 66.667 10.92 0.00 0.00 5.36
269 270 1.449353 GAGCAGAGCTATGGGTGGG 59.551 63.158 10.92 0.00 39.88 4.61
271 272 1.068753 CGGAGCAGAGCTATGGGTG 59.931 63.158 10.92 0.00 39.88 4.61
272 273 2.136878 CCGGAGCAGAGCTATGGGT 61.137 63.158 10.92 0.00 39.88 4.51
273 274 2.739784 CCGGAGCAGAGCTATGGG 59.260 66.667 10.92 0.00 39.88 4.00
275 276 2.030262 GGCCGGAGCAGAGCTATG 59.970 66.667 5.05 3.34 39.88 2.23
277 278 3.150335 CTGGCCGGAGCAGAGCTA 61.150 66.667 5.28 0.00 39.88 3.32
308 309 1.549170 TCCTAACCAGAGAAGCGGAAC 59.451 52.381 0.00 0.00 0.00 3.62
309 310 1.825474 CTCCTAACCAGAGAAGCGGAA 59.175 52.381 0.00 0.00 32.86 4.30
311 312 0.179097 GCTCCTAACCAGAGAAGCGG 60.179 60.000 0.00 0.00 32.86 5.52
312 313 0.820871 AGCTCCTAACCAGAGAAGCG 59.179 55.000 0.00 0.00 32.86 4.68
314 315 2.159170 CCGAAGCTCCTAACCAGAGAAG 60.159 54.545 0.00 0.00 32.86 2.85
315 316 1.825474 CCGAAGCTCCTAACCAGAGAA 59.175 52.381 0.00 0.00 32.86 2.87
316 317 1.272536 ACCGAAGCTCCTAACCAGAGA 60.273 52.381 0.00 0.00 32.86 3.10
317 318 1.134965 CACCGAAGCTCCTAACCAGAG 60.135 57.143 0.00 0.00 0.00 3.35
319 320 0.108138 CCACCGAAGCTCCTAACCAG 60.108 60.000 0.00 0.00 0.00 4.00
320 321 1.980052 CCACCGAAGCTCCTAACCA 59.020 57.895 0.00 0.00 0.00 3.67
321 322 1.449778 GCCACCGAAGCTCCTAACC 60.450 63.158 0.00 0.00 0.00 2.85
322 323 0.107654 ATGCCACCGAAGCTCCTAAC 60.108 55.000 0.00 0.00 0.00 2.34
323 324 0.107703 CATGCCACCGAAGCTCCTAA 60.108 55.000 0.00 0.00 0.00 2.69
324 325 1.522092 CATGCCACCGAAGCTCCTA 59.478 57.895 0.00 0.00 0.00 2.94
326 327 2.825836 CCATGCCACCGAAGCTCC 60.826 66.667 0.00 0.00 0.00 4.70
327 328 2.045926 ACCATGCCACCGAAGCTC 60.046 61.111 0.00 0.00 0.00 4.09
328 329 2.360350 CACCATGCCACCGAAGCT 60.360 61.111 0.00 0.00 0.00 3.74
329 330 3.443045 CCACCATGCCACCGAAGC 61.443 66.667 0.00 0.00 0.00 3.86
332 333 4.720902 CAGCCACCATGCCACCGA 62.721 66.667 0.00 0.00 0.00 4.69
337 338 3.845259 CATGCCAGCCACCATGCC 61.845 66.667 0.00 0.00 33.27 4.40
339 340 2.758327 AGCATGCCAGCCACCATG 60.758 61.111 15.66 4.27 41.27 3.66
345 346 4.575973 ATCCGGAGCATGCCAGCC 62.576 66.667 15.66 12.79 34.23 4.85
347 348 3.285215 GCATCCGGAGCATGCCAG 61.285 66.667 15.66 5.84 35.44 4.85
349 350 4.916293 TCGCATCCGGAGCATGCC 62.916 66.667 20.10 5.80 38.01 4.40
350 351 3.344215 CTCGCATCCGGAGCATGC 61.344 66.667 16.93 16.93 37.91 4.06
351 352 2.664185 CCTCGCATCCGGAGCATG 60.664 66.667 20.87 11.97 34.56 4.06
353 354 4.147449 CACCTCGCATCCGGAGCA 62.147 66.667 20.87 10.47 34.56 4.26
354 355 3.781770 CTCACCTCGCATCCGGAGC 62.782 68.421 11.34 12.90 34.56 4.70
357 358 3.144120 CTCCTCACCTCGCATCCGG 62.144 68.421 0.00 0.00 34.56 5.14
358 359 2.415010 CTCCTCACCTCGCATCCG 59.585 66.667 0.00 0.00 0.00 4.18
360 361 2.107953 GCCTCCTCACCTCGCATC 59.892 66.667 0.00 0.00 0.00 3.91
361 362 2.685017 TGCCTCCTCACCTCGCAT 60.685 61.111 0.00 0.00 0.00 4.73
362 363 3.695606 GTGCCTCCTCACCTCGCA 61.696 66.667 0.00 0.00 0.00 5.10
363 364 3.386237 AGTGCCTCCTCACCTCGC 61.386 66.667 0.00 0.00 37.68 5.03
364 365 2.575993 CAGTGCCTCCTCACCTCG 59.424 66.667 0.00 0.00 37.68 4.63
365 366 2.267324 GCAGTGCCTCCTCACCTC 59.733 66.667 2.85 0.00 37.68 3.85
366 367 3.325753 GGCAGTGCCTCCTCACCT 61.326 66.667 27.48 0.00 46.69 4.00
375 376 2.909965 TTTTCACCCGGCAGTGCC 60.910 61.111 25.07 25.07 46.75 5.01
376 377 2.130073 GAGTTTTCACCCGGCAGTGC 62.130 60.000 6.55 6.55 37.68 4.40
377 378 0.817634 TGAGTTTTCACCCGGCAGTG 60.818 55.000 0.00 0.00 39.20 3.66
378 379 0.535102 CTGAGTTTTCACCCGGCAGT 60.535 55.000 0.00 0.00 0.00 4.40
379 380 0.535102 ACTGAGTTTTCACCCGGCAG 60.535 55.000 0.00 0.00 0.00 4.85
382 383 0.032952 TCGACTGAGTTTTCACCCGG 59.967 55.000 0.00 0.00 0.00 5.73
383 384 1.137513 GTCGACTGAGTTTTCACCCG 58.862 55.000 8.70 0.00 0.00 5.28
384 385 1.137513 CGTCGACTGAGTTTTCACCC 58.862 55.000 14.70 0.00 0.00 4.61
385 386 1.137513 CCGTCGACTGAGTTTTCACC 58.862 55.000 14.70 0.00 0.00 4.02
386 387 0.507358 GCCGTCGACTGAGTTTTCAC 59.493 55.000 14.70 0.00 0.00 3.18
387 388 0.937699 CGCCGTCGACTGAGTTTTCA 60.938 55.000 14.70 0.00 38.10 2.69
389 390 1.361271 TCGCCGTCGACTGAGTTTT 59.639 52.632 14.70 0.00 40.21 2.43
390 391 3.036577 TCGCCGTCGACTGAGTTT 58.963 55.556 14.70 0.00 40.21 2.66
405 406 4.720902 TGGCACCCACAGGCATCG 62.721 66.667 0.00 0.00 36.56 3.84
408 409 1.053264 AAAAATGGCACCCACAGGCA 61.053 50.000 0.00 0.00 45.98 4.75
409 410 0.320683 GAAAAATGGCACCCACAGGC 60.321 55.000 0.00 0.00 35.80 4.85
411 412 1.962807 TGAGAAAAATGGCACCCACAG 59.037 47.619 0.00 0.00 35.80 3.66
412 413 2.079170 TGAGAAAAATGGCACCCACA 57.921 45.000 0.00 0.00 35.80 4.17
413 414 2.754472 GTTGAGAAAAATGGCACCCAC 58.246 47.619 0.00 0.00 35.80 4.61
414 415 1.339610 CGTTGAGAAAAATGGCACCCA 59.660 47.619 0.00 0.00 38.19 4.51
415 416 1.336795 CCGTTGAGAAAAATGGCACCC 60.337 52.381 0.00 0.00 29.67 4.61
416 417 1.336795 CCCGTTGAGAAAAATGGCACC 60.337 52.381 0.00 0.00 35.24 5.01
417 418 1.336795 CCCCGTTGAGAAAAATGGCAC 60.337 52.381 0.00 0.00 35.24 5.01
419 420 0.246360 CCCCCGTTGAGAAAAATGGC 59.754 55.000 0.00 0.00 35.24 4.40
435 436 0.755327 AATGCCAATCTAACGCCCCC 60.755 55.000 0.00 0.00 0.00 5.40
436 437 0.385390 CAATGCCAATCTAACGCCCC 59.615 55.000 0.00 0.00 0.00 5.80
438 439 2.017049 AGACAATGCCAATCTAACGCC 58.983 47.619 0.00 0.00 0.00 5.68
439 440 3.487544 GGAAGACAATGCCAATCTAACGC 60.488 47.826 0.00 0.00 0.00 4.84
441 442 4.336713 GGAGGAAGACAATGCCAATCTAAC 59.663 45.833 0.00 0.00 0.00 2.34
442 443 4.526970 GGAGGAAGACAATGCCAATCTAA 58.473 43.478 0.00 0.00 0.00 2.10
443 444 3.117888 GGGAGGAAGACAATGCCAATCTA 60.118 47.826 0.00 0.00 0.00 1.98
445 446 2.027385 GGGAGGAAGACAATGCCAATC 58.973 52.381 0.00 0.00 0.00 2.67
447 448 0.039618 GGGGAGGAAGACAATGCCAA 59.960 55.000 0.00 0.00 0.00 4.52
448 449 0.846427 AGGGGAGGAAGACAATGCCA 60.846 55.000 0.00 0.00 0.00 4.92
449 450 0.106967 GAGGGGAGGAAGACAATGCC 60.107 60.000 0.00 0.00 0.00 4.40
451 452 1.589414 AGGAGGGGAGGAAGACAATG 58.411 55.000 0.00 0.00 0.00 2.82
452 453 2.310052 CAAAGGAGGGGAGGAAGACAAT 59.690 50.000 0.00 0.00 0.00 2.71
455 456 1.003696 CACAAAGGAGGGGAGGAAGAC 59.996 57.143 0.00 0.00 0.00 3.01
456 457 1.362224 CACAAAGGAGGGGAGGAAGA 58.638 55.000 0.00 0.00 0.00 2.87
457 458 0.329596 CCACAAAGGAGGGGAGGAAG 59.670 60.000 0.00 0.00 41.22 3.46
458 459 0.402861 ACCACAAAGGAGGGGAGGAA 60.403 55.000 0.00 0.00 41.22 3.36
460 461 0.842467 AGACCACAAAGGAGGGGAGG 60.842 60.000 0.00 0.00 41.22 4.30
461 462 0.326264 CAGACCACAAAGGAGGGGAG 59.674 60.000 0.00 0.00 41.22 4.30
462 463 0.401395 ACAGACCACAAAGGAGGGGA 60.401 55.000 0.00 0.00 41.22 4.81
463 464 0.478507 AACAGACCACAAAGGAGGGG 59.521 55.000 0.00 0.00 41.22 4.79
464 465 1.545651 GGAACAGACCACAAAGGAGGG 60.546 57.143 0.00 0.00 41.22 4.30
465 466 1.421646 AGGAACAGACCACAAAGGAGG 59.578 52.381 0.00 0.00 41.22 4.30
466 467 2.498167 CAGGAACAGACCACAAAGGAG 58.502 52.381 0.00 0.00 41.22 3.69
469 470 1.142870 TCCCAGGAACAGACCACAAAG 59.857 52.381 0.00 0.00 0.00 2.77
470 471 1.142870 CTCCCAGGAACAGACCACAAA 59.857 52.381 0.00 0.00 0.00 2.83
473 474 1.056660 TTCTCCCAGGAACAGACCAC 58.943 55.000 0.00 0.00 0.00 4.16
474 475 1.814429 TTTCTCCCAGGAACAGACCA 58.186 50.000 0.00 0.00 0.00 4.02
475 476 2.356227 GGATTTCTCCCAGGAACAGACC 60.356 54.545 0.00 0.00 35.28 3.85
476 477 2.992593 GGATTTCTCCCAGGAACAGAC 58.007 52.381 0.00 0.00 35.28 3.51
489 490 5.722172 TGATTTCTGGATCTGGGATTTCT 57.278 39.130 0.00 0.00 0.00 2.52
491 492 5.135705 AGGATGATTTCTGGATCTGGGATTT 59.864 40.000 0.00 0.00 0.00 2.17
495 496 4.450305 AAGGATGATTTCTGGATCTGGG 57.550 45.455 0.00 0.00 0.00 4.45
497 498 7.642082 AGAAAAAGGATGATTTCTGGATCTG 57.358 36.000 0.34 0.00 42.62 2.90
530 531 9.709495 AATGCACTTTTACACATAACAATGATT 57.291 25.926 0.00 0.00 0.00 2.57
532 533 9.838975 CTAATGCACTTTTACACATAACAATGA 57.161 29.630 0.00 0.00 0.00 2.57
533 534 8.586273 GCTAATGCACTTTTACACATAACAATG 58.414 33.333 0.00 0.00 39.41 2.82
534 535 8.303156 TGCTAATGCACTTTTACACATAACAAT 58.697 29.630 0.00 0.00 45.31 2.71
535 536 7.652727 TGCTAATGCACTTTTACACATAACAA 58.347 30.769 0.00 0.00 45.31 2.83
555 556 3.073798 TCATGTGGGGAAAGAGTTGCTAA 59.926 43.478 0.00 0.00 0.00 3.09
557 558 1.425066 TCATGTGGGGAAAGAGTTGCT 59.575 47.619 0.00 0.00 0.00 3.91
559 560 3.490348 ACTTCATGTGGGGAAAGAGTTG 58.510 45.455 0.00 0.00 0.00 3.16
560 561 3.884037 ACTTCATGTGGGGAAAGAGTT 57.116 42.857 0.00 0.00 0.00 3.01
561 562 3.884037 AACTTCATGTGGGGAAAGAGT 57.116 42.857 0.00 0.00 0.00 3.24
562 563 4.156739 GCTTAACTTCATGTGGGGAAAGAG 59.843 45.833 0.00 0.00 0.00 2.85
563 564 4.079253 GCTTAACTTCATGTGGGGAAAGA 58.921 43.478 0.00 0.00 0.00 2.52
564 565 3.826157 TGCTTAACTTCATGTGGGGAAAG 59.174 43.478 0.00 0.00 0.00 2.62
567 568 2.107378 TGTGCTTAACTTCATGTGGGGA 59.893 45.455 0.00 0.00 0.00 4.81
568 569 2.513753 TGTGCTTAACTTCATGTGGGG 58.486 47.619 0.00 0.00 0.00 4.96
570 571 4.022068 ACCATTGTGCTTAACTTCATGTGG 60.022 41.667 0.00 0.00 0.00 4.17
571 572 5.125100 ACCATTGTGCTTAACTTCATGTG 57.875 39.130 0.00 0.00 0.00 3.21
572 573 5.106712 CGTACCATTGTGCTTAACTTCATGT 60.107 40.000 0.00 0.00 0.00 3.21
573 574 5.106712 ACGTACCATTGTGCTTAACTTCATG 60.107 40.000 0.00 0.00 0.00 3.07
575 576 4.382291 ACGTACCATTGTGCTTAACTTCA 58.618 39.130 0.00 0.00 0.00 3.02
576 577 5.636543 ACTACGTACCATTGTGCTTAACTTC 59.363 40.000 0.00 0.00 0.00 3.01
578 579 5.047519 AGACTACGTACCATTGTGCTTAACT 60.048 40.000 0.00 0.00 0.00 2.24
579 580 5.166398 AGACTACGTACCATTGTGCTTAAC 58.834 41.667 0.00 0.00 0.00 2.01
587 588 5.063060 GCCAAACTAAGACTACGTACCATTG 59.937 44.000 0.00 0.00 0.00 2.82
620 621 5.221126 CCAAAAGGAAATAGTAGGATGCTGC 60.221 44.000 0.00 0.00 29.76 5.25
650 651 5.621193 AGAGTTAATGCACACTACCAACTT 58.379 37.500 0.00 0.00 0.00 2.66
651 652 5.228945 AGAGTTAATGCACACTACCAACT 57.771 39.130 0.00 0.00 0.00 3.16
652 653 6.164176 AGTAGAGTTAATGCACACTACCAAC 58.836 40.000 0.00 0.00 40.06 3.77
653 654 6.354794 AGTAGAGTTAATGCACACTACCAA 57.645 37.500 0.00 0.00 40.06 3.67
656 657 8.671921 TGTAGTAGTAGAGTTAATGCACACTAC 58.328 37.037 0.00 0.00 39.71 2.73
657 658 8.797350 TGTAGTAGTAGAGTTAATGCACACTA 57.203 34.615 0.00 0.00 0.00 2.74
658 659 7.698506 TGTAGTAGTAGAGTTAATGCACACT 57.301 36.000 0.00 0.00 0.00 3.55
659 660 8.188799 TGATGTAGTAGTAGAGTTAATGCACAC 58.811 37.037 0.00 0.00 0.00 3.82
660 661 8.288689 TGATGTAGTAGTAGAGTTAATGCACA 57.711 34.615 0.00 0.00 0.00 4.57
661 662 9.239002 CTTGATGTAGTAGTAGAGTTAATGCAC 57.761 37.037 0.00 0.00 0.00 4.57
667 668 9.118300 GCCTAACTTGATGTAGTAGTAGAGTTA 57.882 37.037 0.00 0.00 0.00 2.24
668 669 7.614583 TGCCTAACTTGATGTAGTAGTAGAGTT 59.385 37.037 0.00 0.00 0.00 3.01
670 671 7.569639 TGCCTAACTTGATGTAGTAGTAGAG 57.430 40.000 0.00 0.00 0.00 2.43
671 672 9.809395 ATATGCCTAACTTGATGTAGTAGTAGA 57.191 33.333 0.00 0.00 0.00 2.59
673 674 9.021807 GGATATGCCTAACTTGATGTAGTAGTA 57.978 37.037 0.00 0.00 0.00 1.82
674 675 7.897864 GGATATGCCTAACTTGATGTAGTAGT 58.102 38.462 0.00 0.00 0.00 2.73
691 692 8.409358 AATTAAACTACCAATGAGGATATGCC 57.591 34.615 0.00 0.00 41.22 4.40
704 705 9.926158 TGTCGAATGTACTTAATTAAACTACCA 57.074 29.630 0.00 0.00 0.00 3.25
728 1175 4.729868 AGGTTAGGCACAAAGAAAGATGT 58.270 39.130 0.00 0.00 0.00 3.06
734 1181 2.307686 CCCCTAGGTTAGGCACAAAGAA 59.692 50.000 8.29 0.00 44.86 2.52
786 1234 4.077300 AGCGACATGGTATGATGAATGT 57.923 40.909 0.00 0.00 36.00 2.71
798 1246 2.923020 GCATTTGGTTAAAGCGACATGG 59.077 45.455 0.00 0.00 0.00 3.66
815 1263 4.906065 ATCACGTGATTATTGCAGCATT 57.094 36.364 25.18 0.00 0.00 3.56
819 1267 8.334632 TGTTGTATTATCACGTGATTATTGCAG 58.665 33.333 34.06 0.00 36.05 4.41
843 1315 7.725844 ACTTTCTTATCCACATTCCTTTCTTGT 59.274 33.333 0.00 0.00 0.00 3.16
869 1681 1.030488 AGGAAGAACGGCGAGATCGA 61.030 55.000 16.62 0.00 43.02 3.59
879 1691 9.676195 CATGAGCATATATATAGAGGAAGAACG 57.324 37.037 0.00 0.00 0.00 3.95
933 1748 9.464714 CTACCTTAATAGCTACACACACTAATG 57.535 37.037 0.00 0.00 0.00 1.90
941 1756 6.608405 TGCTTACCTACCTTAATAGCTACACA 59.392 38.462 0.00 0.00 0.00 3.72
955 1770 3.243805 GCTAGCTACCTTGCTTACCTACC 60.244 52.174 7.70 0.00 43.74 3.18
956 1771 3.637694 AGCTAGCTACCTTGCTTACCTAC 59.362 47.826 17.69 0.00 45.73 3.18
967 1782 5.892524 AGTGTAGTACTAGCTAGCTACCT 57.107 43.478 24.30 17.10 38.04 3.08
968 1783 5.239087 CCAAGTGTAGTACTAGCTAGCTACC 59.761 48.000 24.30 18.47 39.18 3.18
969 1784 5.821995 ACCAAGTGTAGTACTAGCTAGCTAC 59.178 44.000 20.67 21.71 39.18 3.58
970 1785 5.999044 ACCAAGTGTAGTACTAGCTAGCTA 58.001 41.667 22.85 22.85 39.18 3.32
973 1788 5.651139 TGGAACCAAGTGTAGTACTAGCTAG 59.349 44.000 19.44 19.44 39.18 3.42
985 1800 1.270839 CGACATCCTGGAACCAAGTGT 60.271 52.381 0.00 0.00 0.00 3.55
995 1810 2.184322 CCCACGACGACATCCTGG 59.816 66.667 0.00 0.00 34.24 4.45
1100 1966 0.381801 AATGGCCATCTTAAAGCGCG 59.618 50.000 21.08 0.00 0.00 6.86
1119 1985 3.840666 GCATCTCTCCATACCCTCCAATA 59.159 47.826 0.00 0.00 0.00 1.90
1120 1986 2.641815 GCATCTCTCCATACCCTCCAAT 59.358 50.000 0.00 0.00 0.00 3.16
1192 2059 8.902540 AGAAAAACCAAAAACAAGAAGAAGTT 57.097 26.923 0.00 0.00 0.00 2.66
1194 2061 9.811655 GAAAGAAAAACCAAAAACAAGAAGAAG 57.188 29.630 0.00 0.00 0.00 2.85
1195 2062 9.554395 AGAAAGAAAAACCAAAAACAAGAAGAA 57.446 25.926 0.00 0.00 0.00 2.52
1196 2063 9.554395 AAGAAAGAAAAACCAAAAACAAGAAGA 57.446 25.926 0.00 0.00 0.00 2.87
1283 2176 2.121786 CATGAGCACTGCAACAACAAC 58.878 47.619 3.30 0.00 0.00 3.32
1284 2177 1.750206 ACATGAGCACTGCAACAACAA 59.250 42.857 0.00 0.00 0.00 2.83
1285 2178 1.391577 ACATGAGCACTGCAACAACA 58.608 45.000 0.00 0.00 0.00 3.33
1337 2230 9.952188 GCATTACTTCTTTAATAAAGGACCATC 57.048 33.333 12.29 0.00 39.01 3.51
1406 2299 1.002017 ATGGTGGAATGGGCCAAGG 59.998 57.895 11.89 0.00 40.20 3.61
1491 2384 0.468029 AGGGTTGTCTTGCAGTTGGG 60.468 55.000 0.00 0.00 0.00 4.12
1528 2445 3.691342 CGGCCACCTCTTCCACGA 61.691 66.667 2.24 0.00 0.00 4.35
1578 2498 1.975407 CCTTGCCCTGCCACTCTTG 60.975 63.158 0.00 0.00 0.00 3.02
1619 2539 0.465705 AGCCGTCCGTGATCATCATT 59.534 50.000 0.00 0.00 0.00 2.57
1670 2590 3.213506 TCCATTTTCCTGATACATGGCG 58.786 45.455 0.00 0.00 35.31 5.69
1713 2633 2.668550 GGGGTCACCGTGCTTGTC 60.669 66.667 0.00 0.00 37.78 3.18
1747 2667 4.501071 GAATGGCTTGATGTGCTGAATTT 58.499 39.130 0.00 0.00 0.00 1.82
1751 2671 1.089112 CGAATGGCTTGATGTGCTGA 58.911 50.000 0.00 0.00 0.00 4.26
1791 2711 1.276421 CAGTGGGAGTTGGTTCTCGAT 59.724 52.381 0.00 0.00 35.52 3.59
1818 2738 1.442769 GCTGCAACGATCTTCTGGAA 58.557 50.000 0.00 0.00 0.00 3.53
1838 2758 2.359975 GGTGGTTTGCCCTCCTCG 60.360 66.667 0.00 0.00 42.63 4.63
1844 2764 0.896479 AACATACCGGTGGTTTGCCC 60.896 55.000 19.93 0.00 38.01 5.36
1860 2780 7.404671 TGATATCAAGTAGCAGTCAGTAACA 57.595 36.000 1.98 0.00 0.00 2.41
1894 2967 6.856426 GTCGTGTTTATCTTTTTGGAGGAAAG 59.144 38.462 0.00 0.00 35.85 2.62
1920 2993 7.059788 TCTACATGCATGTACACCCATTTATT 58.940 34.615 31.03 8.47 41.97 1.40
1932 3005 1.806247 GCCGTGCTCTACATGCATGTA 60.806 52.381 31.98 31.98 43.61 2.29
2031 3139 1.604278 CAGCTCGTCCGATAGATGTCA 59.396 52.381 0.00 0.00 39.76 3.58
2040 3148 2.989253 TTGAGCCAGCTCGTCCGA 60.989 61.111 14.57 0.00 45.48 4.55
2080 3201 3.215642 GGCATTGCCCTTGTTTGTC 57.784 52.632 17.28 0.00 44.06 3.18
2103 3224 4.855340 TCTTCTCAAAACCAGAACCTTGT 58.145 39.130 0.00 0.00 0.00 3.16
2112 3233 7.649533 ATGCATATCATTCTTCTCAAAACCA 57.350 32.000 0.00 0.00 29.16 3.67
2212 3333 5.559148 ATCTTGAGGAGGCCTAAGTTATG 57.441 43.478 4.42 0.00 31.76 1.90
2249 3370 1.669999 GCGGGCCTTGAAGCATGAAT 61.670 55.000 0.84 0.00 0.00 2.57
2253 3374 3.884704 TTGGCGGGCCTTGAAGCAT 62.885 57.895 11.55 0.00 36.94 3.79
2257 3378 0.251386 TTATGTTGGCGGGCCTTGAA 60.251 50.000 11.55 0.00 36.94 2.69
2267 3389 6.375455 CCTGTCCCTATGAATATTATGTTGGC 59.625 42.308 0.00 0.00 0.00 4.52
2274 3396 5.309543 CACACCCCTGTCCCTATGAATATTA 59.690 44.000 0.00 0.00 0.00 0.98
2303 3425 4.899239 GCGATGCCCCGGTCTCTG 62.899 72.222 0.00 0.00 0.00 3.35
2317 3439 1.146485 TTGTTTGGGGAAGACGCGA 59.854 52.632 15.93 0.00 34.15 5.87
2391 3513 1.236616 TGCTGGGCACGAACTGAATG 61.237 55.000 0.00 0.00 31.71 2.67
2396 3518 2.186826 GTGTTGCTGGGCACGAACT 61.187 57.895 0.00 0.00 38.71 3.01
2424 3546 3.513912 AGTTATCCAGGTCAATGTCGTCA 59.486 43.478 0.00 0.00 0.00 4.35
2571 3699 1.003233 GTGGAATCCACGAGGTCCTTT 59.997 52.381 17.46 0.00 44.95 3.11
2650 3780 4.988598 CCTCACCACGGCAGCGTT 62.989 66.667 0.00 0.00 0.00 4.84
2729 3859 2.077579 TGGTGCACCAGGTCATCAT 58.922 52.632 34.74 0.00 42.01 2.45
2741 3871 1.544537 GGTGATTGGTGTAGTGGTGCA 60.545 52.381 0.00 0.00 0.00 4.57
2813 3946 4.101448 CCGTCCAGGGGCTCTTGG 62.101 72.222 8.85 8.85 35.97 3.61
2849 3982 3.125573 CGACGAGGAGCAGGACGA 61.126 66.667 0.00 0.00 0.00 4.20
2887 4020 3.369261 GGATCATAGCCTAGGACTGCATG 60.369 52.174 14.75 10.60 0.00 4.06
2975 4167 4.550422 GGATTTCTTCCACTTCAACTTGC 58.450 43.478 0.00 0.00 44.74 4.01
3043 4609 7.587629 ACAATGTGCATCGATATATTTTGAGG 58.412 34.615 0.00 0.00 0.00 3.86
3175 5634 2.048877 CGCCCGTAGAAACCGTGT 60.049 61.111 0.00 0.00 0.00 4.49
3280 5741 3.055819 GGGAAGAAAAATCCAGCCTTTCC 60.056 47.826 0.00 0.00 38.80 3.13
3281 5742 3.055819 GGGGAAGAAAAATCCAGCCTTTC 60.056 47.826 0.00 0.00 38.80 2.62
3327 5788 1.664965 GAATCGGCGAGGAATCGGG 60.665 63.158 17.22 0.00 0.00 5.14
3328 5789 0.249489 AAGAATCGGCGAGGAATCGG 60.249 55.000 17.22 0.00 0.00 4.18
3329 5790 1.132588 GAAGAATCGGCGAGGAATCG 58.867 55.000 17.22 0.00 0.00 3.34
3330 5791 1.069358 AGGAAGAATCGGCGAGGAATC 59.931 52.381 17.22 11.05 0.00 2.52
3331 5792 1.069358 GAGGAAGAATCGGCGAGGAAT 59.931 52.381 17.22 1.24 0.00 3.01
3332 5793 0.460311 GAGGAAGAATCGGCGAGGAA 59.540 55.000 17.22 0.00 0.00 3.36
3333 5794 1.392710 GGAGGAAGAATCGGCGAGGA 61.393 60.000 17.22 0.00 0.00 3.71
3338 5799 0.391228 GAGGAGGAGGAAGAATCGGC 59.609 60.000 0.00 0.00 0.00 5.54
3355 5818 1.915078 ATTTGGGGCACGAGGAGGAG 61.915 60.000 0.00 0.00 0.00 3.69
3356 5819 1.910580 GATTTGGGGCACGAGGAGGA 61.911 60.000 0.00 0.00 0.00 3.71
3357 5820 1.452108 GATTTGGGGCACGAGGAGG 60.452 63.158 0.00 0.00 0.00 4.30
3358 5821 1.452108 GGATTTGGGGCACGAGGAG 60.452 63.158 0.00 0.00 0.00 3.69
3359 5822 1.570857 ATGGATTTGGGGCACGAGGA 61.571 55.000 0.00 0.00 0.00 3.71
3360 5823 1.076777 ATGGATTTGGGGCACGAGG 60.077 57.895 0.00 0.00 0.00 4.63
3361 5824 1.103398 GGATGGATTTGGGGCACGAG 61.103 60.000 0.00 0.00 0.00 4.18
3362 5825 1.077068 GGATGGATTTGGGGCACGA 60.077 57.895 0.00 0.00 0.00 4.35
3363 5826 1.076777 AGGATGGATTTGGGGCACG 60.077 57.895 0.00 0.00 0.00 5.34
3390 5853 1.797025 GGAAGAAGATAATCGGGCGG 58.203 55.000 0.00 0.00 0.00 6.13
3421 5884 3.007831 GGAAGATCTGGAGTGGATGGATC 59.992 52.174 0.00 0.00 34.69 3.36
3422 5885 2.978278 GGAAGATCTGGAGTGGATGGAT 59.022 50.000 0.00 0.00 0.00 3.41
3424 5887 2.368221 GAGGAAGATCTGGAGTGGATGG 59.632 54.545 0.00 0.00 0.00 3.51
3425 5888 2.368221 GGAGGAAGATCTGGAGTGGATG 59.632 54.545 0.00 0.00 0.00 3.51
3460 5949 0.389166 CTCCTTATCGCATCCGGAGC 60.389 60.000 11.34 12.90 35.35 4.70
3461 5950 0.389166 GCTCCTTATCGCATCCGGAG 60.389 60.000 11.34 3.17 43.18 4.63
3464 5953 1.734477 CGGCTCCTTATCGCATCCG 60.734 63.158 0.00 0.00 0.00 4.18
3545 6060 1.541672 GAGGAGGAGGAGGAGGAGG 59.458 68.421 0.00 0.00 0.00 4.30
3546 6061 0.998945 AGGAGGAGGAGGAGGAGGAG 60.999 65.000 0.00 0.00 0.00 3.69
3547 6062 1.087725 AGGAGGAGGAGGAGGAGGA 59.912 63.158 0.00 0.00 0.00 3.71
3548 6063 1.232792 CAGGAGGAGGAGGAGGAGG 59.767 68.421 0.00 0.00 0.00 4.30
3549 6064 1.457455 GCAGGAGGAGGAGGAGGAG 60.457 68.421 0.00 0.00 0.00 3.69
3550 6065 1.938596 AGCAGGAGGAGGAGGAGGA 60.939 63.158 0.00 0.00 0.00 3.71
3786 6313 1.438651 TTGCTTTCTCCGTGGAATCG 58.561 50.000 0.00 0.00 0.00 3.34
3836 6366 2.202810 GCTTCTCCTCCGGCTTCG 60.203 66.667 0.00 0.00 0.00 3.79
3868 6453 2.402572 GCTCCTCCTTCTTTGCCGC 61.403 63.158 0.00 0.00 0.00 6.53
3886 6471 4.078516 GTCGGGGAACACCTCGGG 62.079 72.222 8.66 0.00 46.43 5.14


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.