Multiple sequence alignment - TraesCS2A01G557900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G557900 chr2A 100.000 5352 0 0 1 5352 761303468 761308819 0.000000e+00 9884.0
1 TraesCS2A01G557900 chr2A 97.798 545 12 0 280 824 548486149 548485605 0.000000e+00 941.0
2 TraesCS2A01G557900 chr2A 84.440 919 143 0 2016 2934 761856926 761856008 0.000000e+00 905.0
3 TraesCS2A01G557900 chr2A 83.025 972 154 4 2949 3910 761521330 761522300 0.000000e+00 870.0
4 TraesCS2A01G557900 chr2A 83.006 865 129 7 2032 2896 761898617 761897771 0.000000e+00 767.0
5 TraesCS2A01G557900 chr2A 80.857 1003 151 14 2945 3930 762811527 762810549 0.000000e+00 750.0
6 TraesCS2A01G557900 chr2A 77.553 1136 227 16 3053 4174 761897552 761896431 0.000000e+00 660.0
7 TraesCS2A01G557900 chr2A 83.501 697 105 4 3215 3901 761622501 761621805 4.520000e-180 641.0
8 TraesCS2A01G557900 chr2A 84.529 446 67 2 2445 2888 761520869 761521314 1.770000e-119 440.0
9 TraesCS2A01G557900 chr2A 78.188 596 86 23 2790 3363 761674528 761673955 1.850000e-89 340.0
10 TraesCS2A01G557900 chr2A 82.283 254 37 5 1167 1412 764189422 764189675 4.200000e-51 213.0
11 TraesCS2A01G557900 chr2A 81.356 177 16 9 4412 4576 761315586 761315757 1.560000e-25 128.0
12 TraesCS2A01G557900 chr2A 100.000 40 0 0 4712 4751 761315803 761315842 2.070000e-09 75.0
13 TraesCS2A01G557900 chr2D 95.714 3523 129 17 825 4334 637901191 637904704 0.000000e+00 5650.0
14 TraesCS2A01G557900 chr2D 80.491 856 161 4 2031 2886 640024486 640025335 0.000000e+00 651.0
15 TraesCS2A01G557900 chr2D 83.632 446 33 22 4705 5115 637905313 637905753 3.020000e-102 383.0
16 TraesCS2A01G557900 chr2D 83.111 225 21 10 5120 5338 637906703 637906916 7.080000e-44 189.0
17 TraesCS2A01G557900 chr2D 83.721 172 27 1 1431 1602 22816480 22816310 1.540000e-35 161.0
18 TraesCS2A01G557900 chr2D 81.383 188 20 8 4399 4579 637892548 637892369 7.230000e-29 139.0
19 TraesCS2A01G557900 chr2D 83.660 153 19 4 2366 2516 646421032 646420884 7.230000e-29 139.0
20 TraesCS2A01G557900 chr2D 77.095 179 19 11 4387 4548 637969564 637969737 3.430000e-12 84.2
21 TraesCS2A01G557900 chr2B 93.417 3828 172 34 852 4658 796600934 796597166 0.000000e+00 5600.0
22 TraesCS2A01G557900 chr2B 83.034 501 73 6 2025 2516 789260350 789260847 1.370000e-120 444.0
23 TraesCS2A01G557900 chr2B 82.320 362 54 8 2447 2800 795757304 795756945 6.730000e-79 305.0
24 TraesCS2A01G557900 chr2B 76.701 485 109 4 2529 3011 796024840 796025322 3.180000e-67 267.0
25 TraesCS2A01G557900 chr2B 81.306 337 36 13 4761 5077 796583329 796583000 1.150000e-61 248.0
26 TraesCS2A01G557900 chr2B 83.774 265 20 17 4701 4942 796597156 796596892 4.170000e-56 230.0
27 TraesCS2A01G557900 chr2B 80.524 267 32 10 5080 5338 796596890 796596636 2.550000e-43 187.0
28 TraesCS2A01G557900 chr2B 79.817 218 20 13 4379 4579 796622321 796622531 2.600000e-28 137.0
29 TraesCS2A01G557900 chr2B 82.209 163 18 2 5124 5276 796582988 796582827 4.350000e-26 130.0
30 TraesCS2A01G557900 chr2B 84.058 138 16 4 1757 1891 23291865 23291731 1.560000e-25 128.0
31 TraesCS2A01G557900 chr2B 94.444 54 3 0 5299 5352 796576279 796576226 3.430000e-12 84.2
32 TraesCS2A01G557900 chr2B 81.356 118 9 3 4710 4827 796622572 796622676 3.430000e-12 84.2
33 TraesCS2A01G557900 chr2B 100.000 43 0 0 4709 4751 796533194 796533152 4.440000e-11 80.5
34 TraesCS2A01G557900 chr1D 85.228 2410 311 28 1892 4280 6542351 6539966 0.000000e+00 2436.0
35 TraesCS2A01G557900 chr1A 85.852 2276 300 14 2016 4280 7811142 7813406 0.000000e+00 2399.0
36 TraesCS2A01G557900 chr1A 97.248 545 15 0 280 824 510602656 510602112 0.000000e+00 924.0
37 TraesCS2A01G557900 chrUn 86.994 1038 114 10 2016 3053 22435518 22436534 0.000000e+00 1149.0
38 TraesCS2A01G557900 chrUn 82.851 898 133 15 3055 3946 22436750 22437632 0.000000e+00 785.0
39 TraesCS2A01G557900 chrUn 80.395 607 83 16 2771 3363 22521337 22521921 3.830000e-116 429.0
40 TraesCS2A01G557900 chrUn 81.020 490 86 2 2018 2500 22421771 22422260 3.020000e-102 383.0
41 TraesCS2A01G557900 chrUn 84.783 138 11 6 4449 4576 266576134 266576271 4.350000e-26 130.0
42 TraesCS2A01G557900 chr3A 97.806 547 12 0 280 826 530880462 530879916 0.000000e+00 944.0
43 TraesCS2A01G557900 chr3A 96.050 557 21 1 280 835 88676090 88676646 0.000000e+00 905.0
44 TraesCS2A01G557900 chr3A 96.514 545 19 0 280 824 464467241 464466697 0.000000e+00 902.0
45 TraesCS2A01G557900 chr3A 98.750 80 1 0 5273 5352 392539134 392539213 5.590000e-30 143.0
46 TraesCS2A01G557900 chr7A 97.133 558 13 3 269 825 469434591 469434036 0.000000e+00 939.0
47 TraesCS2A01G557900 chr7A 96.875 544 17 0 281 824 523369929 523370472 0.000000e+00 911.0
48 TraesCS2A01G557900 chr7A 77.519 943 194 17 3309 4242 583872942 583873875 7.830000e-153 551.0
49 TraesCS2A01G557900 chr6A 97.258 547 15 0 278 824 567874823 567875369 0.000000e+00 928.0
50 TraesCS2A01G557900 chr1B 94.275 559 32 0 276 834 144169512 144168954 0.000000e+00 856.0
51 TraesCS2A01G557900 chr5A 79.888 1069 190 19 3135 4183 641215542 641214479 0.000000e+00 760.0
52 TraesCS2A01G557900 chr7B 78.353 947 179 21 3309 4242 540249602 540250535 1.660000e-164 590.0
53 TraesCS2A01G557900 chr7B 86.250 80 11 0 1523 1602 665726360 665726281 2.660000e-13 87.9
54 TraesCS2A01G557900 chr6D 72.960 1017 194 67 3135 4100 456790023 456791009 4.080000e-71 279.0
55 TraesCS2A01G557900 chr6B 82.014 139 23 2 3135 3272 694973275 694973412 3.390000e-22 117.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G557900 chr2A 761303468 761308819 5351 False 9884.000000 9884 100.000000 1 5352 1 chr2A.!!$F1 5351
1 TraesCS2A01G557900 chr2A 548485605 548486149 544 True 941.000000 941 97.798000 280 824 1 chr2A.!!$R1 544
2 TraesCS2A01G557900 chr2A 761856008 761856926 918 True 905.000000 905 84.440000 2016 2934 1 chr2A.!!$R4 918
3 TraesCS2A01G557900 chr2A 762810549 762811527 978 True 750.000000 750 80.857000 2945 3930 1 chr2A.!!$R5 985
4 TraesCS2A01G557900 chr2A 761896431 761898617 2186 True 713.500000 767 80.279500 2032 4174 2 chr2A.!!$R6 2142
5 TraesCS2A01G557900 chr2A 761520869 761522300 1431 False 655.000000 870 83.777000 2445 3910 2 chr2A.!!$F4 1465
6 TraesCS2A01G557900 chr2A 761621805 761622501 696 True 641.000000 641 83.501000 3215 3901 1 chr2A.!!$R2 686
7 TraesCS2A01G557900 chr2A 761673955 761674528 573 True 340.000000 340 78.188000 2790 3363 1 chr2A.!!$R3 573
8 TraesCS2A01G557900 chr2D 637901191 637906916 5725 False 2074.000000 5650 87.485667 825 5338 3 chr2D.!!$F3 4513
9 TraesCS2A01G557900 chr2D 640024486 640025335 849 False 651.000000 651 80.491000 2031 2886 1 chr2D.!!$F2 855
10 TraesCS2A01G557900 chr2B 796596636 796600934 4298 True 2005.666667 5600 85.905000 852 5338 3 chr2B.!!$R6 4486
11 TraesCS2A01G557900 chr1D 6539966 6542351 2385 True 2436.000000 2436 85.228000 1892 4280 1 chr1D.!!$R1 2388
12 TraesCS2A01G557900 chr1A 7811142 7813406 2264 False 2399.000000 2399 85.852000 2016 4280 1 chr1A.!!$F1 2264
13 TraesCS2A01G557900 chr1A 510602112 510602656 544 True 924.000000 924 97.248000 280 824 1 chr1A.!!$R1 544
14 TraesCS2A01G557900 chrUn 22435518 22437632 2114 False 967.000000 1149 84.922500 2016 3946 2 chrUn.!!$F4 1930
15 TraesCS2A01G557900 chrUn 22521337 22521921 584 False 429.000000 429 80.395000 2771 3363 1 chrUn.!!$F2 592
16 TraesCS2A01G557900 chr3A 530879916 530880462 546 True 944.000000 944 97.806000 280 826 1 chr3A.!!$R2 546
17 TraesCS2A01G557900 chr3A 88676090 88676646 556 False 905.000000 905 96.050000 280 835 1 chr3A.!!$F1 555
18 TraesCS2A01G557900 chr3A 464466697 464467241 544 True 902.000000 902 96.514000 280 824 1 chr3A.!!$R1 544
19 TraesCS2A01G557900 chr7A 469434036 469434591 555 True 939.000000 939 97.133000 269 825 1 chr7A.!!$R1 556
20 TraesCS2A01G557900 chr7A 523369929 523370472 543 False 911.000000 911 96.875000 281 824 1 chr7A.!!$F1 543
21 TraesCS2A01G557900 chr7A 583872942 583873875 933 False 551.000000 551 77.519000 3309 4242 1 chr7A.!!$F2 933
22 TraesCS2A01G557900 chr6A 567874823 567875369 546 False 928.000000 928 97.258000 278 824 1 chr6A.!!$F1 546
23 TraesCS2A01G557900 chr1B 144168954 144169512 558 True 856.000000 856 94.275000 276 834 1 chr1B.!!$R1 558
24 TraesCS2A01G557900 chr5A 641214479 641215542 1063 True 760.000000 760 79.888000 3135 4183 1 chr5A.!!$R1 1048
25 TraesCS2A01G557900 chr7B 540249602 540250535 933 False 590.000000 590 78.353000 3309 4242 1 chr7B.!!$F1 933
26 TraesCS2A01G557900 chr6D 456790023 456791009 986 False 279.000000 279 72.960000 3135 4100 1 chr6D.!!$F1 965

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
272 273 0.376852 GGATGAATAGCGCGTGCAAA 59.623 50.000 24.79 11.32 46.23 3.68 F
273 274 1.202132 GGATGAATAGCGCGTGCAAAA 60.202 47.619 24.79 8.50 46.23 2.44 F
850 851 1.529226 TATGGTGACGGCAACCAAAG 58.471 50.000 15.18 0.00 37.07 2.77 F
1143 1150 0.465705 CATCCACAGTAGTGCCCGAT 59.534 55.000 0.00 0.00 44.53 4.18 F
2533 2554 1.447838 CACGCGCTCCAAGGTGTAT 60.448 57.895 5.73 0.00 0.00 2.29 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1118 1125 0.745845 CACTACTGTGGATGGCTGGC 60.746 60.000 0.0 0.0 40.33 4.85 R
1119 1126 0.745845 GCACTACTGTGGATGGCTGG 60.746 60.000 0.0 0.0 43.97 4.85 R
2533 2554 1.195115 AGATGAGCTTGGGCGAGTAA 58.805 50.000 0.0 0.0 44.37 2.24 R
2920 2953 3.998672 TGCTTGGTCCCCGTCGTC 61.999 66.667 0.0 0.0 0.00 4.20 R
4505 5246 0.606673 GCCGCTTTGTTCTCTCCCTT 60.607 55.000 0.0 0.0 0.00 3.95 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.836762 TGCGGTAGATGGCGTTTAA 57.163 47.368 0.00 0.00 0.00 1.52
19 20 2.319136 TGCGGTAGATGGCGTTTAAT 57.681 45.000 0.00 0.00 0.00 1.40
20 21 2.634600 TGCGGTAGATGGCGTTTAATT 58.365 42.857 0.00 0.00 0.00 1.40
21 22 2.610374 TGCGGTAGATGGCGTTTAATTC 59.390 45.455 0.00 0.00 0.00 2.17
22 23 2.032290 GCGGTAGATGGCGTTTAATTCC 60.032 50.000 0.00 0.00 0.00 3.01
23 24 3.463944 CGGTAGATGGCGTTTAATTCCT 58.536 45.455 0.00 0.00 0.00 3.36
24 25 3.493503 CGGTAGATGGCGTTTAATTCCTC 59.506 47.826 0.00 0.00 0.00 3.71
25 26 4.448210 GGTAGATGGCGTTTAATTCCTCA 58.552 43.478 0.00 0.00 0.00 3.86
26 27 4.879545 GGTAGATGGCGTTTAATTCCTCAA 59.120 41.667 0.00 0.00 0.00 3.02
27 28 5.355910 GGTAGATGGCGTTTAATTCCTCAAA 59.644 40.000 0.00 0.00 0.00 2.69
28 29 5.975693 AGATGGCGTTTAATTCCTCAAAA 57.024 34.783 0.00 0.00 0.00 2.44
29 30 6.530019 AGATGGCGTTTAATTCCTCAAAAT 57.470 33.333 0.00 0.00 0.00 1.82
30 31 6.935167 AGATGGCGTTTAATTCCTCAAAATT 58.065 32.000 0.00 0.00 33.54 1.82
31 32 8.062065 AGATGGCGTTTAATTCCTCAAAATTA 57.938 30.769 0.00 0.00 31.50 1.40
32 33 8.527810 AGATGGCGTTTAATTCCTCAAAATTAA 58.472 29.630 0.00 0.00 38.62 1.40
33 34 9.145865 GATGGCGTTTAATTCCTCAAAATTAAA 57.854 29.630 9.37 9.37 43.57 1.52
34 35 8.888579 TGGCGTTTAATTCCTCAAAATTAAAA 57.111 26.923 13.26 0.44 45.51 1.52
35 36 8.983724 TGGCGTTTAATTCCTCAAAATTAAAAG 58.016 29.630 16.46 16.46 45.51 2.27
36 37 8.984764 GGCGTTTAATTCCTCAAAATTAAAAGT 58.015 29.630 19.29 0.00 45.51 2.66
43 44 9.502091 AATTCCTCAAAATTAAAAGTTTAGCCC 57.498 29.630 0.00 0.00 0.00 5.19
44 45 7.849322 TCCTCAAAATTAAAAGTTTAGCCCT 57.151 32.000 0.00 0.00 0.00 5.19
45 46 7.892609 TCCTCAAAATTAAAAGTTTAGCCCTC 58.107 34.615 0.00 0.00 0.00 4.30
46 47 7.507616 TCCTCAAAATTAAAAGTTTAGCCCTCA 59.492 33.333 0.00 0.00 0.00 3.86
47 48 8.314021 CCTCAAAATTAAAAGTTTAGCCCTCAT 58.686 33.333 0.00 0.00 0.00 2.90
60 61 8.749354 AGTTTAGCCCTCATATTTAACTTTTGG 58.251 33.333 0.00 0.00 0.00 3.28
61 62 7.654022 TTAGCCCTCATATTTAACTTTTGGG 57.346 36.000 0.00 0.00 35.47 4.12
62 63 5.837829 AGCCCTCATATTTAACTTTTGGGA 58.162 37.500 0.00 0.00 34.34 4.37
63 64 6.443832 AGCCCTCATATTTAACTTTTGGGAT 58.556 36.000 0.00 0.00 34.34 3.85
64 65 6.324770 AGCCCTCATATTTAACTTTTGGGATG 59.675 38.462 0.00 0.00 34.34 3.51
65 66 6.462909 GCCCTCATATTTAACTTTTGGGATGG 60.463 42.308 0.00 0.00 34.34 3.51
66 67 6.462909 CCCTCATATTTAACTTTTGGGATGGC 60.463 42.308 0.00 0.00 34.34 4.40
67 68 6.324770 CCTCATATTTAACTTTTGGGATGGCT 59.675 38.462 0.00 0.00 0.00 4.75
68 69 7.505585 CCTCATATTTAACTTTTGGGATGGCTA 59.494 37.037 0.00 0.00 0.00 3.93
69 70 8.463930 TCATATTTAACTTTTGGGATGGCTAG 57.536 34.615 0.00 0.00 0.00 3.42
70 71 8.278639 TCATATTTAACTTTTGGGATGGCTAGA 58.721 33.333 0.00 0.00 0.00 2.43
71 72 8.571336 CATATTTAACTTTTGGGATGGCTAGAG 58.429 37.037 0.00 0.00 0.00 2.43
72 73 5.772393 TTAACTTTTGGGATGGCTAGAGA 57.228 39.130 0.00 0.00 0.00 3.10
73 74 4.870021 AACTTTTGGGATGGCTAGAGAT 57.130 40.909 0.00 0.00 0.00 2.75
74 75 4.162040 ACTTTTGGGATGGCTAGAGATG 57.838 45.455 0.00 0.00 0.00 2.90
75 76 3.525199 ACTTTTGGGATGGCTAGAGATGT 59.475 43.478 0.00 0.00 0.00 3.06
76 77 3.845781 TTTGGGATGGCTAGAGATGTC 57.154 47.619 0.00 0.00 0.00 3.06
77 78 1.722034 TGGGATGGCTAGAGATGTCC 58.278 55.000 0.00 0.00 0.00 4.02
78 79 1.221523 TGGGATGGCTAGAGATGTCCT 59.778 52.381 0.00 0.00 0.00 3.85
79 80 2.450886 TGGGATGGCTAGAGATGTCCTA 59.549 50.000 0.00 0.00 0.00 2.94
80 81 3.116746 TGGGATGGCTAGAGATGTCCTAA 60.117 47.826 0.00 0.00 0.00 2.69
81 82 3.513515 GGGATGGCTAGAGATGTCCTAAG 59.486 52.174 0.00 0.00 0.00 2.18
82 83 3.513515 GGATGGCTAGAGATGTCCTAAGG 59.486 52.174 0.00 0.00 0.00 2.69
83 84 3.689872 TGGCTAGAGATGTCCTAAGGT 57.310 47.619 0.00 0.00 0.00 3.50
84 85 3.300388 TGGCTAGAGATGTCCTAAGGTG 58.700 50.000 0.00 0.00 0.00 4.00
85 86 2.630580 GGCTAGAGATGTCCTAAGGTGG 59.369 54.545 0.00 0.00 0.00 4.61
86 87 3.301274 GCTAGAGATGTCCTAAGGTGGT 58.699 50.000 0.00 0.00 0.00 4.16
87 88 4.471548 GCTAGAGATGTCCTAAGGTGGTA 58.528 47.826 0.00 0.00 0.00 3.25
88 89 4.894114 GCTAGAGATGTCCTAAGGTGGTAA 59.106 45.833 0.00 0.00 0.00 2.85
89 90 5.540719 GCTAGAGATGTCCTAAGGTGGTAAT 59.459 44.000 0.00 0.00 0.00 1.89
90 91 6.294843 GCTAGAGATGTCCTAAGGTGGTAATC 60.295 46.154 0.00 0.00 0.00 1.75
91 92 5.782925 AGAGATGTCCTAAGGTGGTAATCT 58.217 41.667 0.00 0.00 35.05 2.40
92 93 6.923670 AGAGATGTCCTAAGGTGGTAATCTA 58.076 40.000 0.00 0.00 33.68 1.98
93 94 7.007723 AGAGATGTCCTAAGGTGGTAATCTAG 58.992 42.308 0.00 0.00 33.68 2.43
94 95 6.684538 AGATGTCCTAAGGTGGTAATCTAGT 58.315 40.000 0.00 0.00 32.65 2.57
95 96 6.551601 AGATGTCCTAAGGTGGTAATCTAGTG 59.448 42.308 0.00 0.00 32.65 2.74
96 97 5.586877 TGTCCTAAGGTGGTAATCTAGTGT 58.413 41.667 0.00 0.00 0.00 3.55
97 98 6.021030 TGTCCTAAGGTGGTAATCTAGTGTT 58.979 40.000 0.00 0.00 0.00 3.32
98 99 7.184161 TGTCCTAAGGTGGTAATCTAGTGTTA 58.816 38.462 0.00 0.00 0.00 2.41
99 100 7.123247 TGTCCTAAGGTGGTAATCTAGTGTTAC 59.877 40.741 10.41 10.41 0.00 2.50
100 101 7.123247 GTCCTAAGGTGGTAATCTAGTGTTACA 59.877 40.741 16.79 0.00 34.51 2.41
101 102 7.675195 TCCTAAGGTGGTAATCTAGTGTTACAA 59.325 37.037 16.79 7.87 34.51 2.41
102 103 8.483758 CCTAAGGTGGTAATCTAGTGTTACAAT 58.516 37.037 16.79 0.00 34.51 2.71
103 104 9.530633 CTAAGGTGGTAATCTAGTGTTACAATC 57.469 37.037 16.79 9.97 34.51 2.67
104 105 7.490657 AGGTGGTAATCTAGTGTTACAATCA 57.509 36.000 16.79 7.85 34.51 2.57
105 106 8.090788 AGGTGGTAATCTAGTGTTACAATCAT 57.909 34.615 16.79 6.71 34.51 2.45
106 107 8.204836 AGGTGGTAATCTAGTGTTACAATCATC 58.795 37.037 16.79 9.75 34.51 2.92
107 108 7.985184 GGTGGTAATCTAGTGTTACAATCATCA 59.015 37.037 16.79 6.91 34.51 3.07
108 109 9.547753 GTGGTAATCTAGTGTTACAATCATCAT 57.452 33.333 16.79 0.00 34.51 2.45
114 115 9.973450 ATCTAGTGTTACAATCATCATAGTGAC 57.027 33.333 0.00 0.00 0.00 3.67
115 116 8.414003 TCTAGTGTTACAATCATCATAGTGACC 58.586 37.037 0.00 0.00 0.00 4.02
116 117 7.187824 AGTGTTACAATCATCATAGTGACCT 57.812 36.000 0.00 0.00 0.00 3.85
117 118 7.044181 AGTGTTACAATCATCATAGTGACCTG 58.956 38.462 0.00 0.00 0.00 4.00
118 119 6.818644 GTGTTACAATCATCATAGTGACCTGT 59.181 38.462 0.00 0.00 34.06 4.00
119 120 7.334421 GTGTTACAATCATCATAGTGACCTGTT 59.666 37.037 0.00 0.00 32.68 3.16
120 121 8.536175 TGTTACAATCATCATAGTGACCTGTTA 58.464 33.333 0.00 0.00 32.68 2.41
121 122 9.547753 GTTACAATCATCATAGTGACCTGTTAT 57.452 33.333 0.00 0.00 32.68 1.89
122 123 9.546428 TTACAATCATCATAGTGACCTGTTATG 57.454 33.333 0.00 0.00 32.68 1.90
123 124 6.484643 ACAATCATCATAGTGACCTGTTATGC 59.515 38.462 0.00 0.00 28.39 3.14
124 125 5.612725 TCATCATAGTGACCTGTTATGCA 57.387 39.130 0.00 0.00 0.00 3.96
125 126 5.604565 TCATCATAGTGACCTGTTATGCAG 58.395 41.667 0.00 0.00 44.63 4.41
126 127 3.797039 TCATAGTGACCTGTTATGCAGC 58.203 45.455 0.00 0.00 43.71 5.25
127 128 3.452264 TCATAGTGACCTGTTATGCAGCT 59.548 43.478 0.00 0.00 43.71 4.24
128 129 4.649218 TCATAGTGACCTGTTATGCAGCTA 59.351 41.667 0.00 0.00 43.71 3.32
129 130 5.305386 TCATAGTGACCTGTTATGCAGCTAT 59.695 40.000 0.00 0.00 43.71 2.97
130 131 3.801698 AGTGACCTGTTATGCAGCTATG 58.198 45.455 0.00 0.00 43.71 2.23
131 132 3.452264 AGTGACCTGTTATGCAGCTATGA 59.548 43.478 0.00 0.00 43.71 2.15
132 133 4.102210 AGTGACCTGTTATGCAGCTATGAT 59.898 41.667 0.00 0.00 43.71 2.45
133 134 4.818546 GTGACCTGTTATGCAGCTATGATT 59.181 41.667 0.00 0.00 43.71 2.57
134 135 5.049818 GTGACCTGTTATGCAGCTATGATTC 60.050 44.000 0.00 0.00 43.71 2.52
135 136 4.392940 ACCTGTTATGCAGCTATGATTCC 58.607 43.478 0.00 0.00 43.71 3.01
136 137 3.755378 CCTGTTATGCAGCTATGATTCCC 59.245 47.826 0.00 0.00 43.71 3.97
137 138 4.506271 CCTGTTATGCAGCTATGATTCCCT 60.506 45.833 0.00 0.00 43.71 4.20
138 139 5.280164 CCTGTTATGCAGCTATGATTCCCTA 60.280 44.000 0.00 0.00 43.71 3.53
139 140 6.186420 TGTTATGCAGCTATGATTCCCTAA 57.814 37.500 0.00 0.00 0.00 2.69
140 141 6.782986 TGTTATGCAGCTATGATTCCCTAAT 58.217 36.000 0.00 0.00 0.00 1.73
141 142 7.233632 TGTTATGCAGCTATGATTCCCTAATT 58.766 34.615 0.00 0.00 0.00 1.40
142 143 8.382405 TGTTATGCAGCTATGATTCCCTAATTA 58.618 33.333 0.00 0.00 0.00 1.40
143 144 9.231297 GTTATGCAGCTATGATTCCCTAATTAA 57.769 33.333 0.00 0.00 0.00 1.40
144 145 7.693969 ATGCAGCTATGATTCCCTAATTAAC 57.306 36.000 0.00 0.00 0.00 2.01
145 146 5.700832 TGCAGCTATGATTCCCTAATTAACG 59.299 40.000 0.00 0.00 0.00 3.18
146 147 5.932303 GCAGCTATGATTCCCTAATTAACGA 59.068 40.000 0.00 0.00 0.00 3.85
147 148 6.595716 GCAGCTATGATTCCCTAATTAACGAT 59.404 38.462 0.00 0.00 0.00 3.73
148 149 7.413438 GCAGCTATGATTCCCTAATTAACGATG 60.413 40.741 0.00 0.00 0.00 3.84
149 150 7.604164 CAGCTATGATTCCCTAATTAACGATGT 59.396 37.037 0.00 0.00 0.00 3.06
150 151 7.604164 AGCTATGATTCCCTAATTAACGATGTG 59.396 37.037 0.00 0.00 0.00 3.21
151 152 7.602644 GCTATGATTCCCTAATTAACGATGTGA 59.397 37.037 0.00 0.00 0.00 3.58
152 153 7.969536 ATGATTCCCTAATTAACGATGTGAG 57.030 36.000 0.00 0.00 0.00 3.51
153 154 5.758296 TGATTCCCTAATTAACGATGTGAGC 59.242 40.000 0.00 0.00 0.00 4.26
154 155 5.353394 TTCCCTAATTAACGATGTGAGCT 57.647 39.130 0.00 0.00 0.00 4.09
155 156 5.353394 TCCCTAATTAACGATGTGAGCTT 57.647 39.130 0.00 0.00 0.00 3.74
156 157 5.116180 TCCCTAATTAACGATGTGAGCTTG 58.884 41.667 0.00 0.00 0.00 4.01
157 158 4.273480 CCCTAATTAACGATGTGAGCTTGG 59.727 45.833 0.00 0.00 0.00 3.61
158 159 4.876107 CCTAATTAACGATGTGAGCTTGGT 59.124 41.667 0.00 0.00 0.00 3.67
159 160 5.354234 CCTAATTAACGATGTGAGCTTGGTT 59.646 40.000 0.00 0.00 0.00 3.67
160 161 6.537301 CCTAATTAACGATGTGAGCTTGGTTA 59.463 38.462 0.00 0.00 0.00 2.85
161 162 7.226720 CCTAATTAACGATGTGAGCTTGGTTAT 59.773 37.037 0.00 0.00 0.00 1.89
162 163 7.391148 AATTAACGATGTGAGCTTGGTTATT 57.609 32.000 0.00 0.00 0.00 1.40
163 164 4.685169 AACGATGTGAGCTTGGTTATTG 57.315 40.909 0.00 0.00 0.00 1.90
164 165 3.937814 ACGATGTGAGCTTGGTTATTGA 58.062 40.909 0.00 0.00 0.00 2.57
165 166 4.517285 ACGATGTGAGCTTGGTTATTGAT 58.483 39.130 0.00 0.00 0.00 2.57
166 167 4.572389 ACGATGTGAGCTTGGTTATTGATC 59.428 41.667 0.00 0.00 0.00 2.92
167 168 4.571984 CGATGTGAGCTTGGTTATTGATCA 59.428 41.667 0.00 0.00 0.00 2.92
168 169 5.065090 CGATGTGAGCTTGGTTATTGATCAA 59.935 40.000 11.26 11.26 0.00 2.57
169 170 6.238566 CGATGTGAGCTTGGTTATTGATCAAT 60.239 38.462 23.75 23.75 34.93 2.57
170 171 6.198650 TGTGAGCTTGGTTATTGATCAATG 57.801 37.500 27.59 12.87 32.50 2.82
171 172 5.945191 TGTGAGCTTGGTTATTGATCAATGA 59.055 36.000 27.59 18.74 32.50 2.57
172 173 6.433716 TGTGAGCTTGGTTATTGATCAATGAA 59.566 34.615 27.59 15.81 32.50 2.57
173 174 6.971184 GTGAGCTTGGTTATTGATCAATGAAG 59.029 38.462 27.59 21.84 32.50 3.02
174 175 6.660521 TGAGCTTGGTTATTGATCAATGAAGT 59.339 34.615 27.59 7.42 32.50 3.01
175 176 6.860080 AGCTTGGTTATTGATCAATGAAGTG 58.140 36.000 27.59 15.03 32.50 3.16
176 177 6.660521 AGCTTGGTTATTGATCAATGAAGTGA 59.339 34.615 27.59 6.71 32.50 3.41
177 178 7.177216 AGCTTGGTTATTGATCAATGAAGTGAA 59.823 33.333 27.59 12.18 32.50 3.18
178 179 7.487189 GCTTGGTTATTGATCAATGAAGTGAAG 59.513 37.037 27.59 20.22 32.50 3.02
179 180 8.408043 TTGGTTATTGATCAATGAAGTGAAGT 57.592 30.769 27.59 3.84 32.50 3.01
180 181 7.819644 TGGTTATTGATCAATGAAGTGAAGTG 58.180 34.615 27.59 0.00 32.50 3.16
181 182 7.448161 TGGTTATTGATCAATGAAGTGAAGTGT 59.552 33.333 27.59 3.14 32.50 3.55
182 183 7.752239 GGTTATTGATCAATGAAGTGAAGTGTG 59.248 37.037 27.59 0.00 32.50 3.82
183 184 6.889301 ATTGATCAATGAAGTGAAGTGTGT 57.111 33.333 20.11 0.00 0.00 3.72
184 185 6.698008 TTGATCAATGAAGTGAAGTGTGTT 57.302 33.333 3.38 0.00 0.00 3.32
185 186 6.304356 TGATCAATGAAGTGAAGTGTGTTC 57.696 37.500 0.00 0.00 0.00 3.18
186 187 5.239306 TGATCAATGAAGTGAAGTGTGTTCC 59.761 40.000 0.00 0.00 0.00 3.62
187 188 3.882888 TCAATGAAGTGAAGTGTGTTCCC 59.117 43.478 0.00 0.00 0.00 3.97
188 189 2.341846 TGAAGTGAAGTGTGTTCCCC 57.658 50.000 0.00 0.00 0.00 4.81
189 190 1.843851 TGAAGTGAAGTGTGTTCCCCT 59.156 47.619 0.00 0.00 0.00 4.79
190 191 3.042682 TGAAGTGAAGTGTGTTCCCCTA 58.957 45.455 0.00 0.00 0.00 3.53
191 192 3.456644 TGAAGTGAAGTGTGTTCCCCTAA 59.543 43.478 0.00 0.00 0.00 2.69
192 193 4.080243 TGAAGTGAAGTGTGTTCCCCTAAA 60.080 41.667 0.00 0.00 0.00 1.85
193 194 4.513406 AGTGAAGTGTGTTCCCCTAAAA 57.487 40.909 0.00 0.00 0.00 1.52
194 195 4.862371 AGTGAAGTGTGTTCCCCTAAAAA 58.138 39.130 0.00 0.00 0.00 1.94
221 222 7.615582 GCTATGCAGCTATTTTACATATGGA 57.384 36.000 7.80 0.00 44.93 3.41
222 223 8.218338 GCTATGCAGCTATTTTACATATGGAT 57.782 34.615 7.80 0.00 44.93 3.41
223 224 9.330063 GCTATGCAGCTATTTTACATATGGATA 57.670 33.333 7.80 0.00 44.93 2.59
243 244 7.377766 GGATACAAAGTGCTGTTCATTTAGA 57.622 36.000 0.00 0.00 0.00 2.10
244 245 7.816640 GGATACAAAGTGCTGTTCATTTAGAA 58.183 34.615 0.00 0.00 0.00 2.10
264 265 6.851222 AGAACTACAAATGGATGAATAGCG 57.149 37.500 0.00 0.00 0.00 4.26
265 266 5.237344 AGAACTACAAATGGATGAATAGCGC 59.763 40.000 0.00 0.00 0.00 5.92
266 267 3.494626 ACTACAAATGGATGAATAGCGCG 59.505 43.478 0.00 0.00 0.00 6.86
267 268 2.288666 ACAAATGGATGAATAGCGCGT 58.711 42.857 8.43 0.00 0.00 6.01
268 269 2.032054 ACAAATGGATGAATAGCGCGTG 59.968 45.455 8.43 0.00 0.00 5.34
269 270 0.588252 AATGGATGAATAGCGCGTGC 59.412 50.000 14.39 14.39 43.24 5.34
270 271 0.532640 ATGGATGAATAGCGCGTGCA 60.533 50.000 24.79 9.68 46.23 4.57
271 272 0.742635 TGGATGAATAGCGCGTGCAA 60.743 50.000 24.79 3.18 46.23 4.08
272 273 0.376852 GGATGAATAGCGCGTGCAAA 59.623 50.000 24.79 11.32 46.23 3.68
273 274 1.202132 GGATGAATAGCGCGTGCAAAA 60.202 47.619 24.79 8.50 46.23 2.44
274 275 2.104144 GATGAATAGCGCGTGCAAAAG 58.896 47.619 24.79 0.00 46.23 2.27
290 291 7.308589 GCGTGCAAAAGATATAGGGACAATTAT 60.309 37.037 0.00 0.00 0.00 1.28
415 416 1.816224 ACCGTTTGACTGCAACTTTGT 59.184 42.857 0.00 0.00 32.79 2.83
713 714 3.269178 AGTTACGGTCAAACGGTCAAAA 58.731 40.909 0.00 0.00 38.39 2.44
827 828 5.170748 GGCTCAAATGTAATTGTCCCAAAG 58.829 41.667 0.00 0.00 36.10 2.77
829 830 6.351286 GGCTCAAATGTAATTGTCCCAAAGAT 60.351 38.462 0.00 0.00 36.10 2.40
849 850 2.208132 ATATGGTGACGGCAACCAAA 57.792 45.000 15.18 0.00 37.07 3.28
850 851 1.529226 TATGGTGACGGCAACCAAAG 58.471 50.000 15.18 0.00 37.07 2.77
1007 1009 2.651367 TATTACGAGACACGCGCCCG 62.651 60.000 5.73 5.27 46.94 6.13
1058 1060 2.890847 CTACCAACCGAGCCAGAGCG 62.891 65.000 0.00 0.00 46.67 5.03
1118 1125 3.117372 CCGTCCTACACCGCCTAG 58.883 66.667 0.00 0.00 0.00 3.02
1119 1126 2.412112 CGTCCTACACCGCCTAGC 59.588 66.667 0.00 0.00 0.00 3.42
1122 1129 1.756950 TCCTACACCGCCTAGCCAG 60.757 63.158 0.00 0.00 0.00 4.85
1127 1134 3.866582 ACCGCCTAGCCAGCCATC 61.867 66.667 0.00 0.00 0.00 3.51
1129 1136 3.865383 CGCCTAGCCAGCCATCCA 61.865 66.667 0.00 0.00 0.00 3.41
1130 1137 2.203266 GCCTAGCCAGCCATCCAC 60.203 66.667 0.00 0.00 0.00 4.02
1131 1138 3.047807 GCCTAGCCAGCCATCCACA 62.048 63.158 0.00 0.00 0.00 4.17
1132 1139 1.147824 CCTAGCCAGCCATCCACAG 59.852 63.158 0.00 0.00 0.00 3.66
1133 1140 1.630126 CCTAGCCAGCCATCCACAGT 61.630 60.000 0.00 0.00 0.00 3.55
1136 1143 0.911525 AGCCAGCCATCCACAGTAGT 60.912 55.000 0.00 0.00 0.00 2.73
1137 1144 0.745845 GCCAGCCATCCACAGTAGTG 60.746 60.000 0.00 0.00 45.47 2.74
1143 1150 0.465705 CATCCACAGTAGTGCCCGAT 59.534 55.000 0.00 0.00 44.53 4.18
1366 1373 1.724929 CACCGTCGACGTGTCTGTC 60.725 63.158 33.49 0.00 37.74 3.51
1658 1668 3.255397 AGCAGCAGCCTTCCCAGT 61.255 61.111 0.00 0.00 43.56 4.00
1792 1802 3.858868 GAAGAGCGGCCACGACACA 62.859 63.158 2.24 0.00 44.60 3.72
1825 1835 2.683933 ATTCCGGCCTCGTCAGGT 60.684 61.111 0.00 0.00 42.74 4.00
2068 2087 2.462456 TGTCGTACCTCTACGTGACT 57.538 50.000 0.00 0.00 45.14 3.41
2533 2554 1.447838 CACGCGCTCCAAGGTGTAT 60.448 57.895 5.73 0.00 0.00 2.29
2857 2890 3.006672 CAACGACCTTGCCAAGTCT 57.993 52.632 3.37 0.00 0.00 3.24
4280 4721 2.699160 AGGGTGACATGCTCCTATGAT 58.301 47.619 0.00 0.00 0.00 2.45
4282 4723 2.636893 GGGTGACATGCTCCTATGATCT 59.363 50.000 0.00 0.00 0.00 2.75
4283 4724 3.306641 GGGTGACATGCTCCTATGATCTC 60.307 52.174 0.00 0.00 0.00 2.75
4284 4725 3.306641 GGTGACATGCTCCTATGATCTCC 60.307 52.174 0.00 0.00 0.00 3.71
4285 4726 3.577848 GTGACATGCTCCTATGATCTCCT 59.422 47.826 0.00 0.00 0.00 3.69
4287 4728 4.088634 GACATGCTCCTATGATCTCCTCT 58.911 47.826 0.00 0.00 0.00 3.69
4289 4730 4.527816 ACATGCTCCTATGATCTCCTCTTC 59.472 45.833 0.00 0.00 0.00 2.87
4290 4731 4.467861 TGCTCCTATGATCTCCTCTTCT 57.532 45.455 0.00 0.00 0.00 2.85
4291 4732 4.406456 TGCTCCTATGATCTCCTCTTCTC 58.594 47.826 0.00 0.00 0.00 2.87
4297 4743 6.332635 TCCTATGATCTCCTCTTCTCTTCTCT 59.667 42.308 0.00 0.00 0.00 3.10
4301 4747 6.122277 TGATCTCCTCTTCTCTTCTCTTCTC 58.878 44.000 0.00 0.00 0.00 2.87
4302 4748 5.779241 TCTCCTCTTCTCTTCTCTTCTCT 57.221 43.478 0.00 0.00 0.00 3.10
4309 4755 7.362401 CCTCTTCTCTTCTCTTCTCTTCTCTTG 60.362 44.444 0.00 0.00 0.00 3.02
4389 5115 9.030452 ACTACTACTACTACACTACACTACACT 57.970 37.037 0.00 0.00 0.00 3.55
4392 5118 8.807118 ACTACTACTACACTACACTACACTACA 58.193 37.037 0.00 0.00 0.00 2.74
4393 5119 7.897575 ACTACTACACTACACTACACTACAC 57.102 40.000 0.00 0.00 0.00 2.90
4410 5137 6.073765 ACACTACACAATCGATCACTTTTGTC 60.074 38.462 0.00 0.00 30.23 3.18
4470 5202 6.013379 TGGAATGGAGTGGATAGATACTCTC 58.987 44.000 0.00 0.00 42.24 3.20
4478 5210 6.976088 AGTGGATAGATACTCTCAACATTCG 58.024 40.000 0.00 0.00 0.00 3.34
4487 5219 2.337583 TCTCAACATTCGGAAGCTTCG 58.662 47.619 19.91 14.82 0.00 3.79
4492 5233 1.281899 CATTCGGAAGCTTCGTCTCC 58.718 55.000 19.91 5.83 0.00 3.71
4495 5236 0.456221 TCGGAAGCTTCGTCTCCATC 59.544 55.000 19.91 2.88 0.00 3.51
4497 5238 1.404181 CGGAAGCTTCGTCTCCATCAA 60.404 52.381 19.91 0.00 0.00 2.57
4501 5242 5.059833 GGAAGCTTCGTCTCCATCAATAAT 58.940 41.667 19.91 0.00 0.00 1.28
4502 5243 5.529060 GGAAGCTTCGTCTCCATCAATAATT 59.471 40.000 19.91 0.00 0.00 1.40
4503 5244 6.706270 GGAAGCTTCGTCTCCATCAATAATTA 59.294 38.462 19.91 0.00 0.00 1.40
4504 5245 7.226720 GGAAGCTTCGTCTCCATCAATAATTAA 59.773 37.037 19.91 0.00 0.00 1.40
4505 5246 8.506168 AAGCTTCGTCTCCATCAATAATTAAA 57.494 30.769 0.00 0.00 0.00 1.52
4579 5327 4.131649 TGTTCCACTACATTCCATACCG 57.868 45.455 0.00 0.00 0.00 4.02
4581 5329 3.812156 TCCACTACATTCCATACCGTG 57.188 47.619 0.00 0.00 0.00 4.94
4649 5403 4.466827 TGTGTCTACACCAGTTAGTCAGA 58.533 43.478 10.58 0.00 45.88 3.27
4658 5412 2.355108 CCAGTTAGTCAGACACCATGGG 60.355 54.545 18.09 7.72 0.00 4.00
4659 5413 1.279271 AGTTAGTCAGACACCATGGGC 59.721 52.381 18.09 4.98 0.00 5.36
4661 5415 1.613317 TAGTCAGACACCATGGGCGG 61.613 60.000 18.09 7.76 0.00 6.13
4662 5416 2.927856 TCAGACACCATGGGCGGT 60.928 61.111 18.09 11.26 41.07 5.68
4669 5423 2.516930 CCATGGGCGGTGTCCATC 60.517 66.667 2.85 0.00 45.91 3.51
4670 5424 2.591753 CATGGGCGGTGTCCATCT 59.408 61.111 0.00 0.00 45.91 2.90
4671 5425 1.077501 CATGGGCGGTGTCCATCTT 60.078 57.895 0.00 0.00 45.91 2.40
4672 5426 1.097547 CATGGGCGGTGTCCATCTTC 61.098 60.000 0.00 0.00 45.91 2.87
4673 5427 1.561769 ATGGGCGGTGTCCATCTTCA 61.562 55.000 0.00 0.00 45.91 3.02
4674 5428 1.224592 GGGCGGTGTCCATCTTCAT 59.775 57.895 0.00 0.00 0.00 2.57
4675 5429 0.815615 GGGCGGTGTCCATCTTCATC 60.816 60.000 0.00 0.00 0.00 2.92
4676 5430 0.107703 GGCGGTGTCCATCTTCATCA 60.108 55.000 0.00 0.00 0.00 3.07
4677 5431 1.475751 GGCGGTGTCCATCTTCATCAT 60.476 52.381 0.00 0.00 0.00 2.45
4678 5432 1.869767 GCGGTGTCCATCTTCATCATC 59.130 52.381 0.00 0.00 0.00 2.92
4679 5433 2.742856 GCGGTGTCCATCTTCATCATCA 60.743 50.000 0.00 0.00 0.00 3.07
4680 5434 3.736720 CGGTGTCCATCTTCATCATCAT 58.263 45.455 0.00 0.00 0.00 2.45
4681 5435 3.744942 CGGTGTCCATCTTCATCATCATC 59.255 47.826 0.00 0.00 0.00 2.92
4682 5436 4.711399 GGTGTCCATCTTCATCATCATCA 58.289 43.478 0.00 0.00 0.00 3.07
4683 5437 5.314529 GGTGTCCATCTTCATCATCATCAT 58.685 41.667 0.00 0.00 0.00 2.45
4684 5438 5.411977 GGTGTCCATCTTCATCATCATCATC 59.588 44.000 0.00 0.00 0.00 2.92
4685 5439 5.995897 GTGTCCATCTTCATCATCATCATCA 59.004 40.000 0.00 0.00 0.00 3.07
4686 5440 6.655425 GTGTCCATCTTCATCATCATCATCAT 59.345 38.462 0.00 0.00 0.00 2.45
4687 5441 6.879458 TGTCCATCTTCATCATCATCATCATC 59.121 38.462 0.00 0.00 0.00 2.92
4688 5442 6.879458 GTCCATCTTCATCATCATCATCATCA 59.121 38.462 0.00 0.00 0.00 3.07
4689 5443 7.554476 GTCCATCTTCATCATCATCATCATCAT 59.446 37.037 0.00 0.00 0.00 2.45
4690 5444 7.770897 TCCATCTTCATCATCATCATCATCATC 59.229 37.037 0.00 0.00 0.00 2.92
4691 5445 7.554118 CCATCTTCATCATCATCATCATCATCA 59.446 37.037 0.00 0.00 0.00 3.07
4692 5446 9.118300 CATCTTCATCATCATCATCATCATCAT 57.882 33.333 0.00 0.00 0.00 2.45
4693 5447 8.723942 TCTTCATCATCATCATCATCATCATC 57.276 34.615 0.00 0.00 0.00 2.92
4694 5448 8.321353 TCTTCATCATCATCATCATCATCATCA 58.679 33.333 0.00 0.00 0.00 3.07
4695 5449 9.118300 CTTCATCATCATCATCATCATCATCAT 57.882 33.333 0.00 0.00 0.00 2.45
4696 5450 8.668510 TCATCATCATCATCATCATCATCATC 57.331 34.615 0.00 0.00 0.00 2.92
4697 5451 8.489489 TCATCATCATCATCATCATCATCATCT 58.511 33.333 0.00 0.00 0.00 2.90
4698 5452 9.118300 CATCATCATCATCATCATCATCATCTT 57.882 33.333 0.00 0.00 0.00 2.40
4699 5453 8.723942 TCATCATCATCATCATCATCATCTTC 57.276 34.615 0.00 0.00 0.00 2.87
4759 5513 2.070783 GCGGAATAAAGTTGGTCGACA 58.929 47.619 18.91 0.27 0.00 4.35
4769 5523 1.193874 GTTGGTCGACAAAGCTAACGG 59.806 52.381 18.91 0.00 41.58 4.44
4795 5550 7.254932 GGAATAAATAAAGCCTCACTGTGCTAG 60.255 40.741 2.12 0.00 36.66 3.42
4796 5551 2.386661 TAAAGCCTCACTGTGCTAGC 57.613 50.000 8.10 8.10 36.66 3.42
4797 5552 0.397941 AAAGCCTCACTGTGCTAGCA 59.602 50.000 14.93 14.93 36.66 3.49
4798 5553 0.036577 AAGCCTCACTGTGCTAGCAG 60.037 55.000 20.03 10.30 41.92 4.24
4809 5564 3.534554 TGTGCTAGCAGTGTATTCCATG 58.465 45.455 20.03 0.00 0.00 3.66
4811 5566 3.941483 GTGCTAGCAGTGTATTCCATGTT 59.059 43.478 20.03 0.00 0.00 2.71
4814 5569 3.610040 AGCAGTGTATTCCATGTTCGA 57.390 42.857 0.00 0.00 0.00 3.71
4886 5668 5.164233 CAGCATCAAGGTGGAGTATATACG 58.836 45.833 7.23 0.00 41.98 3.06
4887 5669 5.048013 CAGCATCAAGGTGGAGTATATACGA 60.048 44.000 7.23 0.00 41.98 3.43
4951 5736 2.842496 AGCATGTCTCTTGAAGGATCCA 59.158 45.455 15.82 0.00 0.00 3.41
4958 5743 3.261897 TCTCTTGAAGGATCCAACTCCAC 59.738 47.826 15.82 0.00 37.81 4.02
4959 5744 2.028112 TCTTGAAGGATCCAACTCCACG 60.028 50.000 15.82 2.21 37.81 4.94
4972 5761 2.513204 CCACGGAGGCAGCTGATG 60.513 66.667 20.43 3.65 0.00 3.07
5024 5818 2.058675 GGCGGTGCCTCCTATACAT 58.941 57.895 0.00 0.00 46.69 2.29
5025 5819 1.263356 GGCGGTGCCTCCTATACATA 58.737 55.000 0.00 0.00 46.69 2.29
5026 5820 1.831736 GGCGGTGCCTCCTATACATAT 59.168 52.381 0.00 0.00 46.69 1.78
5027 5821 3.028850 GGCGGTGCCTCCTATACATATA 58.971 50.000 0.00 0.00 46.69 0.86
5028 5822 3.181478 GGCGGTGCCTCCTATACATATAC 60.181 52.174 0.00 0.00 46.69 1.47
5037 5832 6.183360 GCCTCCTATACATATACAGTGGTACG 60.183 46.154 0.00 0.00 30.94 3.67
5043 5838 9.875691 CTATACATATACAGTGGTACGGTAGTA 57.124 37.037 0.00 0.00 32.64 1.82
5060 5855 0.623723 GTAGGGCCTTCCATTGTCCA 59.376 55.000 13.45 0.00 38.24 4.02
5061 5856 1.005450 GTAGGGCCTTCCATTGTCCAA 59.995 52.381 13.45 0.00 38.24 3.53
5066 5861 2.767960 GGCCTTCCATTGTCCAATCATT 59.232 45.455 0.00 0.00 0.00 2.57
5073 5868 6.070951 TCCATTGTCCAATCATTTCTCTCT 57.929 37.500 0.00 0.00 0.00 3.10
5074 5869 6.487828 TCCATTGTCCAATCATTTCTCTCTT 58.512 36.000 0.00 0.00 0.00 2.85
5075 5870 6.950041 TCCATTGTCCAATCATTTCTCTCTTT 59.050 34.615 0.00 0.00 0.00 2.52
5076 5871 7.452501 TCCATTGTCCAATCATTTCTCTCTTTT 59.547 33.333 0.00 0.00 0.00 2.27
5115 5910 5.310594 AGTGGTGAAGTGGGCACATATATAT 59.689 40.000 0.00 0.00 37.99 0.86
5116 5911 6.500400 AGTGGTGAAGTGGGCACATATATATA 59.500 38.462 0.00 0.00 37.99 0.86
5117 5912 6.818644 GTGGTGAAGTGGGCACATATATATAG 59.181 42.308 0.00 0.00 37.99 1.31
5153 6893 2.293677 TGAACGGTTCCATCGATCTG 57.706 50.000 17.62 0.00 32.04 2.90
5177 6917 4.122776 CTGTCCACTCGGATTATCCAAAG 58.877 47.826 12.17 10.12 45.33 2.77
5194 6934 5.376625 TCCAAAGTTGTAGAATGCTCAAGT 58.623 37.500 0.00 0.00 0.00 3.16
5195 6935 6.530120 TCCAAAGTTGTAGAATGCTCAAGTA 58.470 36.000 0.00 0.00 0.00 2.24
5196 6936 6.995686 TCCAAAGTTGTAGAATGCTCAAGTAA 59.004 34.615 0.00 0.00 0.00 2.24
5198 6938 7.805071 CCAAAGTTGTAGAATGCTCAAGTAAAG 59.195 37.037 0.00 0.00 0.00 1.85
5199 6939 6.487689 AGTTGTAGAATGCTCAAGTAAAGC 57.512 37.500 0.00 0.00 40.26 3.51
5224 6986 5.836821 CATCAATCATGGATGGATGGATC 57.163 43.478 13.48 0.00 43.23 3.36
5225 6987 3.946606 TCAATCATGGATGGATGGATCG 58.053 45.455 0.00 0.00 0.00 3.69
5226 6988 3.014623 CAATCATGGATGGATGGATCGG 58.985 50.000 0.00 0.00 0.00 4.18
5227 6989 2.028561 TCATGGATGGATGGATCGGA 57.971 50.000 0.00 0.00 0.00 4.55
5228 6990 2.554563 TCATGGATGGATGGATCGGAT 58.445 47.619 0.00 0.00 0.00 4.18
5229 6991 2.502947 TCATGGATGGATGGATCGGATC 59.497 50.000 9.54 9.54 0.00 3.36
5230 6992 0.897621 TGGATGGATGGATCGGATCG 59.102 55.000 11.62 0.00 0.00 3.69
5231 6993 0.460987 GGATGGATGGATCGGATCGC 60.461 60.000 11.62 5.84 0.00 4.58
5232 6994 0.460987 GATGGATGGATCGGATCGCC 60.461 60.000 11.62 12.53 0.00 5.54
5233 6995 0.906756 ATGGATGGATCGGATCGCCT 60.907 55.000 18.01 5.41 0.00 5.52
5326 7100 7.628769 TTTCATAGAGTAGCATGCATTTTCA 57.371 32.000 21.98 0.59 0.00 2.69
5338 7112 4.098914 TGCATTTTCAAGGTAGGTCAGT 57.901 40.909 0.00 0.00 0.00 3.41
5339 7113 5.235850 TGCATTTTCAAGGTAGGTCAGTA 57.764 39.130 0.00 0.00 0.00 2.74
5340 7114 5.245531 TGCATTTTCAAGGTAGGTCAGTAG 58.754 41.667 0.00 0.00 0.00 2.57
5341 7115 4.636206 GCATTTTCAAGGTAGGTCAGTAGG 59.364 45.833 0.00 0.00 0.00 3.18
5342 7116 5.803470 GCATTTTCAAGGTAGGTCAGTAGGT 60.803 44.000 0.00 0.00 0.00 3.08
5343 7117 4.884668 TTTCAAGGTAGGTCAGTAGGTG 57.115 45.455 0.00 0.00 0.00 4.00
5344 7118 2.816411 TCAAGGTAGGTCAGTAGGTGG 58.184 52.381 0.00 0.00 0.00 4.61
5345 7119 2.111255 TCAAGGTAGGTCAGTAGGTGGT 59.889 50.000 0.00 0.00 0.00 4.16
5346 7120 2.904434 CAAGGTAGGTCAGTAGGTGGTT 59.096 50.000 0.00 0.00 0.00 3.67
5347 7121 2.537143 AGGTAGGTCAGTAGGTGGTTG 58.463 52.381 0.00 0.00 0.00 3.77
5348 7122 1.066358 GGTAGGTCAGTAGGTGGTTGC 60.066 57.143 0.00 0.00 0.00 4.17
5349 7123 1.621814 GTAGGTCAGTAGGTGGTTGCA 59.378 52.381 0.00 0.00 0.00 4.08
5350 7124 0.687354 AGGTCAGTAGGTGGTTGCAG 59.313 55.000 0.00 0.00 0.00 4.41
5351 7125 0.396811 GGTCAGTAGGTGGTTGCAGT 59.603 55.000 0.00 0.00 0.00 4.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.319136 ATTAAACGCCATCTACCGCA 57.681 45.000 0.00 0.00 0.00 5.69
1 2 2.032290 GGAATTAAACGCCATCTACCGC 60.032 50.000 0.00 0.00 0.00 5.68
2 3 3.463944 AGGAATTAAACGCCATCTACCG 58.536 45.455 0.00 0.00 0.00 4.02
3 4 4.448210 TGAGGAATTAAACGCCATCTACC 58.552 43.478 0.00 0.00 0.00 3.18
4 5 6.431198 TTTGAGGAATTAAACGCCATCTAC 57.569 37.500 0.00 0.00 0.00 2.59
5 6 7.639113 ATTTTGAGGAATTAAACGCCATCTA 57.361 32.000 0.00 0.00 0.00 1.98
8 9 9.495572 TTTTAATTTTGAGGAATTAAACGCCAT 57.504 25.926 12.50 0.00 44.65 4.40
9 10 8.888579 TTTTAATTTTGAGGAATTAAACGCCA 57.111 26.923 12.50 0.46 44.65 5.69
10 11 8.984764 ACTTTTAATTTTGAGGAATTAAACGCC 58.015 29.630 12.50 0.00 44.65 5.68
17 18 9.502091 GGGCTAAACTTTTAATTTTGAGGAATT 57.498 29.630 0.00 0.00 33.95 2.17
18 19 8.880244 AGGGCTAAACTTTTAATTTTGAGGAAT 58.120 29.630 0.00 0.00 0.00 3.01
19 20 8.257602 AGGGCTAAACTTTTAATTTTGAGGAA 57.742 30.769 0.00 0.00 0.00 3.36
20 21 7.507616 TGAGGGCTAAACTTTTAATTTTGAGGA 59.492 33.333 0.00 0.00 0.00 3.71
21 22 7.666623 TGAGGGCTAAACTTTTAATTTTGAGG 58.333 34.615 0.00 0.00 0.00 3.86
34 35 8.749354 CCAAAAGTTAAATATGAGGGCTAAACT 58.251 33.333 0.00 0.00 0.00 2.66
35 36 7.979537 CCCAAAAGTTAAATATGAGGGCTAAAC 59.020 37.037 0.00 0.00 0.00 2.01
36 37 7.896496 TCCCAAAAGTTAAATATGAGGGCTAAA 59.104 33.333 0.00 0.00 33.79 1.85
37 38 7.415086 TCCCAAAAGTTAAATATGAGGGCTAA 58.585 34.615 0.00 0.00 33.79 3.09
38 39 6.975949 TCCCAAAAGTTAAATATGAGGGCTA 58.024 36.000 0.00 0.00 33.79 3.93
39 40 5.837829 TCCCAAAAGTTAAATATGAGGGCT 58.162 37.500 0.00 0.00 33.79 5.19
40 41 6.462909 CCATCCCAAAAGTTAAATATGAGGGC 60.463 42.308 0.00 0.00 33.79 5.19
41 42 6.462909 GCCATCCCAAAAGTTAAATATGAGGG 60.463 42.308 0.00 0.00 35.09 4.30
42 43 6.324770 AGCCATCCCAAAAGTTAAATATGAGG 59.675 38.462 0.00 0.00 0.00 3.86
43 44 7.352079 AGCCATCCCAAAAGTTAAATATGAG 57.648 36.000 0.00 0.00 0.00 2.90
44 45 8.278639 TCTAGCCATCCCAAAAGTTAAATATGA 58.721 33.333 0.00 0.00 0.00 2.15
45 46 8.463930 TCTAGCCATCCCAAAAGTTAAATATG 57.536 34.615 0.00 0.00 0.00 1.78
46 47 8.502738 TCTCTAGCCATCCCAAAAGTTAAATAT 58.497 33.333 0.00 0.00 0.00 1.28
47 48 7.867921 TCTCTAGCCATCCCAAAAGTTAAATA 58.132 34.615 0.00 0.00 0.00 1.40
48 49 6.731467 TCTCTAGCCATCCCAAAAGTTAAAT 58.269 36.000 0.00 0.00 0.00 1.40
49 50 6.134535 TCTCTAGCCATCCCAAAAGTTAAA 57.865 37.500 0.00 0.00 0.00 1.52
50 51 5.772393 TCTCTAGCCATCCCAAAAGTTAA 57.228 39.130 0.00 0.00 0.00 2.01
51 52 5.191722 ACATCTCTAGCCATCCCAAAAGTTA 59.808 40.000 0.00 0.00 0.00 2.24
52 53 4.018050 ACATCTCTAGCCATCCCAAAAGTT 60.018 41.667 0.00 0.00 0.00 2.66
53 54 3.525199 ACATCTCTAGCCATCCCAAAAGT 59.475 43.478 0.00 0.00 0.00 2.66
54 55 4.133078 GACATCTCTAGCCATCCCAAAAG 58.867 47.826 0.00 0.00 0.00 2.27
55 56 3.117888 GGACATCTCTAGCCATCCCAAAA 60.118 47.826 0.00 0.00 0.00 2.44
56 57 2.439507 GGACATCTCTAGCCATCCCAAA 59.560 50.000 0.00 0.00 0.00 3.28
57 58 2.050144 GGACATCTCTAGCCATCCCAA 58.950 52.381 0.00 0.00 0.00 4.12
58 59 1.221523 AGGACATCTCTAGCCATCCCA 59.778 52.381 0.00 0.00 0.00 4.37
59 60 2.022718 AGGACATCTCTAGCCATCCC 57.977 55.000 0.00 0.00 0.00 3.85
60 61 3.513515 CCTTAGGACATCTCTAGCCATCC 59.486 52.174 0.00 0.00 0.00 3.51
61 62 4.021544 CACCTTAGGACATCTCTAGCCATC 60.022 50.000 4.77 0.00 0.00 3.51
62 63 3.900601 CACCTTAGGACATCTCTAGCCAT 59.099 47.826 4.77 0.00 0.00 4.40
63 64 3.300388 CACCTTAGGACATCTCTAGCCA 58.700 50.000 4.77 0.00 0.00 4.75
64 65 2.630580 CCACCTTAGGACATCTCTAGCC 59.369 54.545 4.77 0.00 0.00 3.93
65 66 3.301274 ACCACCTTAGGACATCTCTAGC 58.699 50.000 4.77 0.00 0.00 3.42
66 67 7.007723 AGATTACCACCTTAGGACATCTCTAG 58.992 42.308 4.77 0.00 30.28 2.43
67 68 6.923670 AGATTACCACCTTAGGACATCTCTA 58.076 40.000 4.77 0.00 30.28 2.43
68 69 5.782925 AGATTACCACCTTAGGACATCTCT 58.217 41.667 4.77 0.00 30.28 3.10
69 70 6.778559 ACTAGATTACCACCTTAGGACATCTC 59.221 42.308 4.77 0.00 34.75 2.75
70 71 6.551601 CACTAGATTACCACCTTAGGACATCT 59.448 42.308 4.77 6.48 36.04 2.90
71 72 6.324254 ACACTAGATTACCACCTTAGGACATC 59.676 42.308 4.77 0.00 0.00 3.06
72 73 6.203072 ACACTAGATTACCACCTTAGGACAT 58.797 40.000 4.77 0.00 0.00 3.06
73 74 5.586877 ACACTAGATTACCACCTTAGGACA 58.413 41.667 4.77 0.00 0.00 4.02
74 75 6.541934 AACACTAGATTACCACCTTAGGAC 57.458 41.667 4.77 0.00 0.00 3.85
75 76 7.184161 TGTAACACTAGATTACCACCTTAGGA 58.816 38.462 4.77 0.00 32.52 2.94
76 77 7.414222 TGTAACACTAGATTACCACCTTAGG 57.586 40.000 14.82 0.00 32.52 2.69
77 78 9.530633 GATTGTAACACTAGATTACCACCTTAG 57.469 37.037 14.82 0.00 32.52 2.18
78 79 9.038072 TGATTGTAACACTAGATTACCACCTTA 57.962 33.333 14.82 0.00 32.52 2.69
79 80 7.913789 TGATTGTAACACTAGATTACCACCTT 58.086 34.615 14.82 1.67 32.52 3.50
80 81 7.490657 TGATTGTAACACTAGATTACCACCT 57.509 36.000 14.82 0.00 32.52 4.00
81 82 7.985184 TGATGATTGTAACACTAGATTACCACC 59.015 37.037 14.82 1.66 32.52 4.61
82 83 8.942338 TGATGATTGTAACACTAGATTACCAC 57.058 34.615 14.82 9.23 32.52 4.16
88 89 9.973450 GTCACTATGATGATTGTAACACTAGAT 57.027 33.333 0.00 0.00 0.00 1.98
89 90 8.414003 GGTCACTATGATGATTGTAACACTAGA 58.586 37.037 0.00 0.00 0.00 2.43
90 91 8.417106 AGGTCACTATGATGATTGTAACACTAG 58.583 37.037 0.00 0.00 0.00 2.57
91 92 8.197439 CAGGTCACTATGATGATTGTAACACTA 58.803 37.037 0.00 0.00 0.00 2.74
92 93 7.044181 CAGGTCACTATGATGATTGTAACACT 58.956 38.462 0.00 0.00 0.00 3.55
93 94 6.818644 ACAGGTCACTATGATGATTGTAACAC 59.181 38.462 0.00 0.00 31.44 3.32
94 95 6.946340 ACAGGTCACTATGATGATTGTAACA 58.054 36.000 0.00 0.00 31.44 2.41
95 96 7.849804 AACAGGTCACTATGATGATTGTAAC 57.150 36.000 0.00 0.00 32.34 2.50
96 97 9.546428 CATAACAGGTCACTATGATGATTGTAA 57.454 33.333 0.00 0.00 32.34 2.41
97 98 7.657354 GCATAACAGGTCACTATGATGATTGTA 59.343 37.037 0.00 0.00 32.34 2.41
98 99 6.484643 GCATAACAGGTCACTATGATGATTGT 59.515 38.462 0.00 0.00 33.34 2.71
99 100 6.484308 TGCATAACAGGTCACTATGATGATTG 59.516 38.462 0.00 0.00 0.00 2.67
100 101 6.594744 TGCATAACAGGTCACTATGATGATT 58.405 36.000 0.00 0.00 0.00 2.57
101 102 6.178607 TGCATAACAGGTCACTATGATGAT 57.821 37.500 0.00 0.00 0.00 2.45
102 103 5.604565 CTGCATAACAGGTCACTATGATGA 58.395 41.667 0.00 0.00 43.19 2.92
103 104 5.919272 CTGCATAACAGGTCACTATGATG 57.081 43.478 0.00 0.00 43.19 3.07
116 117 4.712051 AGGGAATCATAGCTGCATAACA 57.288 40.909 1.02 0.00 0.00 2.41
117 118 7.693969 AATTAGGGAATCATAGCTGCATAAC 57.306 36.000 1.02 0.00 0.00 1.89
118 119 9.231297 GTTAATTAGGGAATCATAGCTGCATAA 57.769 33.333 1.02 0.00 0.00 1.90
119 120 7.549134 CGTTAATTAGGGAATCATAGCTGCATA 59.451 37.037 1.02 0.00 0.00 3.14
120 121 6.372659 CGTTAATTAGGGAATCATAGCTGCAT 59.627 38.462 1.02 0.00 0.00 3.96
121 122 5.700832 CGTTAATTAGGGAATCATAGCTGCA 59.299 40.000 1.02 0.00 0.00 4.41
122 123 5.932303 TCGTTAATTAGGGAATCATAGCTGC 59.068 40.000 0.00 0.00 0.00 5.25
123 124 7.604164 ACATCGTTAATTAGGGAATCATAGCTG 59.396 37.037 0.00 0.00 0.00 4.24
124 125 7.604164 CACATCGTTAATTAGGGAATCATAGCT 59.396 37.037 0.00 0.00 0.00 3.32
125 126 7.602644 TCACATCGTTAATTAGGGAATCATAGC 59.397 37.037 0.00 0.00 0.00 2.97
126 127 9.144747 CTCACATCGTTAATTAGGGAATCATAG 57.855 37.037 0.00 0.00 0.00 2.23
127 128 7.602644 GCTCACATCGTTAATTAGGGAATCATA 59.397 37.037 0.00 0.00 0.00 2.15
128 129 6.428159 GCTCACATCGTTAATTAGGGAATCAT 59.572 38.462 0.00 0.00 0.00 2.45
129 130 5.758296 GCTCACATCGTTAATTAGGGAATCA 59.242 40.000 0.00 0.00 0.00 2.57
130 131 5.992217 AGCTCACATCGTTAATTAGGGAATC 59.008 40.000 0.00 0.00 0.00 2.52
131 132 5.930135 AGCTCACATCGTTAATTAGGGAAT 58.070 37.500 0.00 0.00 0.00 3.01
132 133 5.353394 AGCTCACATCGTTAATTAGGGAA 57.647 39.130 0.00 0.00 0.00 3.97
133 134 5.116180 CAAGCTCACATCGTTAATTAGGGA 58.884 41.667 0.00 0.00 0.00 4.20
134 135 4.273480 CCAAGCTCACATCGTTAATTAGGG 59.727 45.833 0.00 0.00 0.00 3.53
135 136 4.876107 ACCAAGCTCACATCGTTAATTAGG 59.124 41.667 0.00 0.00 0.00 2.69
136 137 6.422776 AACCAAGCTCACATCGTTAATTAG 57.577 37.500 0.00 0.00 0.00 1.73
137 138 8.394877 CAATAACCAAGCTCACATCGTTAATTA 58.605 33.333 0.00 0.00 0.00 1.40
138 139 7.120579 TCAATAACCAAGCTCACATCGTTAATT 59.879 33.333 0.00 0.00 0.00 1.40
139 140 6.597672 TCAATAACCAAGCTCACATCGTTAAT 59.402 34.615 0.00 0.00 0.00 1.40
140 141 5.935206 TCAATAACCAAGCTCACATCGTTAA 59.065 36.000 0.00 0.00 0.00 2.01
141 142 5.483811 TCAATAACCAAGCTCACATCGTTA 58.516 37.500 0.00 0.00 0.00 3.18
142 143 4.323417 TCAATAACCAAGCTCACATCGTT 58.677 39.130 0.00 0.00 0.00 3.85
143 144 3.937814 TCAATAACCAAGCTCACATCGT 58.062 40.909 0.00 0.00 0.00 3.73
144 145 4.571984 TGATCAATAACCAAGCTCACATCG 59.428 41.667 0.00 0.00 0.00 3.84
145 146 6.441093 TTGATCAATAACCAAGCTCACATC 57.559 37.500 3.38 0.00 0.00 3.06
146 147 6.604396 TCATTGATCAATAACCAAGCTCACAT 59.396 34.615 20.32 0.00 0.00 3.21
147 148 5.945191 TCATTGATCAATAACCAAGCTCACA 59.055 36.000 20.32 0.00 0.00 3.58
148 149 6.441093 TCATTGATCAATAACCAAGCTCAC 57.559 37.500 20.32 0.00 0.00 3.51
149 150 6.660521 ACTTCATTGATCAATAACCAAGCTCA 59.339 34.615 20.32 0.00 0.00 4.26
150 151 6.971184 CACTTCATTGATCAATAACCAAGCTC 59.029 38.462 20.32 0.00 0.00 4.09
151 152 6.660521 TCACTTCATTGATCAATAACCAAGCT 59.339 34.615 20.32 8.44 0.00 3.74
152 153 6.855836 TCACTTCATTGATCAATAACCAAGC 58.144 36.000 20.32 0.00 0.00 4.01
153 154 8.517878 ACTTCACTTCATTGATCAATAACCAAG 58.482 33.333 20.32 19.03 0.00 3.61
154 155 8.298854 CACTTCACTTCATTGATCAATAACCAA 58.701 33.333 20.32 10.02 0.00 3.67
155 156 7.448161 ACACTTCACTTCATTGATCAATAACCA 59.552 33.333 20.32 2.90 0.00 3.67
156 157 7.752239 CACACTTCACTTCATTGATCAATAACC 59.248 37.037 20.32 0.00 0.00 2.85
157 158 8.292448 ACACACTTCACTTCATTGATCAATAAC 58.708 33.333 20.32 0.00 0.00 1.89
158 159 8.394971 ACACACTTCACTTCATTGATCAATAA 57.605 30.769 20.32 3.53 0.00 1.40
159 160 7.984422 ACACACTTCACTTCATTGATCAATA 57.016 32.000 20.32 5.71 0.00 1.90
160 161 6.889301 ACACACTTCACTTCATTGATCAAT 57.111 33.333 15.36 15.36 0.00 2.57
161 162 6.238731 GGAACACACTTCACTTCATTGATCAA 60.239 38.462 11.26 11.26 0.00 2.57
162 163 5.239306 GGAACACACTTCACTTCATTGATCA 59.761 40.000 0.00 0.00 0.00 2.92
163 164 5.335191 GGGAACACACTTCACTTCATTGATC 60.335 44.000 0.00 0.00 0.00 2.92
164 165 4.520492 GGGAACACACTTCACTTCATTGAT 59.480 41.667 0.00 0.00 0.00 2.57
165 166 3.882888 GGGAACACACTTCACTTCATTGA 59.117 43.478 0.00 0.00 0.00 2.57
166 167 3.004734 GGGGAACACACTTCACTTCATTG 59.995 47.826 0.00 0.00 0.00 2.82
167 168 3.117512 AGGGGAACACACTTCACTTCATT 60.118 43.478 0.00 0.00 0.00 2.57
168 169 2.443255 AGGGGAACACACTTCACTTCAT 59.557 45.455 0.00 0.00 0.00 2.57
169 170 1.843851 AGGGGAACACACTTCACTTCA 59.156 47.619 0.00 0.00 0.00 3.02
170 171 2.640316 AGGGGAACACACTTCACTTC 57.360 50.000 0.00 0.00 0.00 3.01
171 172 4.513406 TTTAGGGGAACACACTTCACTT 57.487 40.909 0.00 0.00 0.00 3.16
172 173 4.513406 TTTTAGGGGAACACACTTCACT 57.487 40.909 0.00 0.00 0.00 3.41
200 201 9.519191 TTGTATCCATATGTAAAATAGCTGCAT 57.481 29.630 1.02 0.00 0.00 3.96
201 202 8.916628 TTGTATCCATATGTAAAATAGCTGCA 57.083 30.769 1.02 0.00 0.00 4.41
202 203 9.831737 CTTTGTATCCATATGTAAAATAGCTGC 57.168 33.333 0.00 0.00 0.00 5.25
205 206 9.612620 GCACTTTGTATCCATATGTAAAATAGC 57.387 33.333 1.24 0.00 0.00 2.97
208 209 9.189156 ACAGCACTTTGTATCCATATGTAAAAT 57.811 29.630 1.24 0.00 0.00 1.82
209 210 8.574251 ACAGCACTTTGTATCCATATGTAAAA 57.426 30.769 1.24 0.00 0.00 1.52
210 211 8.574251 AACAGCACTTTGTATCCATATGTAAA 57.426 30.769 1.24 0.00 0.00 2.01
211 212 7.826744 TGAACAGCACTTTGTATCCATATGTAA 59.173 33.333 1.24 0.00 0.00 2.41
212 213 7.334858 TGAACAGCACTTTGTATCCATATGTA 58.665 34.615 1.24 0.00 0.00 2.29
213 214 6.179756 TGAACAGCACTTTGTATCCATATGT 58.820 36.000 1.24 0.00 0.00 2.29
214 215 6.682423 TGAACAGCACTTTGTATCCATATG 57.318 37.500 0.00 0.00 0.00 1.78
215 216 7.886629 AATGAACAGCACTTTGTATCCATAT 57.113 32.000 0.00 0.00 0.00 1.78
216 217 7.701539 AAATGAACAGCACTTTGTATCCATA 57.298 32.000 0.00 0.00 0.00 2.74
217 218 6.594788 AAATGAACAGCACTTTGTATCCAT 57.405 33.333 0.00 0.00 0.00 3.41
218 219 6.939730 TCTAAATGAACAGCACTTTGTATCCA 59.060 34.615 0.00 0.00 0.00 3.41
219 220 7.377766 TCTAAATGAACAGCACTTTGTATCC 57.622 36.000 0.00 0.00 0.00 2.59
238 239 8.826710 CGCTATTCATCCATTTGTAGTTCTAAA 58.173 33.333 0.00 0.00 0.00 1.85
239 240 7.042051 GCGCTATTCATCCATTTGTAGTTCTAA 60.042 37.037 0.00 0.00 0.00 2.10
240 241 6.423905 GCGCTATTCATCCATTTGTAGTTCTA 59.576 38.462 0.00 0.00 0.00 2.10
241 242 5.237344 GCGCTATTCATCCATTTGTAGTTCT 59.763 40.000 0.00 0.00 0.00 3.01
242 243 5.444122 GCGCTATTCATCCATTTGTAGTTC 58.556 41.667 0.00 0.00 0.00 3.01
243 244 4.024893 CGCGCTATTCATCCATTTGTAGTT 60.025 41.667 5.56 0.00 0.00 2.24
244 245 3.494626 CGCGCTATTCATCCATTTGTAGT 59.505 43.478 5.56 0.00 0.00 2.73
245 246 3.494626 ACGCGCTATTCATCCATTTGTAG 59.505 43.478 5.73 0.00 0.00 2.74
246 247 3.247411 CACGCGCTATTCATCCATTTGTA 59.753 43.478 5.73 0.00 0.00 2.41
247 248 2.032054 CACGCGCTATTCATCCATTTGT 59.968 45.455 5.73 0.00 0.00 2.83
248 249 2.642995 CACGCGCTATTCATCCATTTG 58.357 47.619 5.73 0.00 0.00 2.32
249 250 1.002468 GCACGCGCTATTCATCCATTT 60.002 47.619 5.73 0.00 34.30 2.32
250 251 0.588252 GCACGCGCTATTCATCCATT 59.412 50.000 5.73 0.00 34.30 3.16
251 252 0.532640 TGCACGCGCTATTCATCCAT 60.533 50.000 5.73 0.00 39.64 3.41
252 253 0.742635 TTGCACGCGCTATTCATCCA 60.743 50.000 5.73 0.00 39.64 3.41
253 254 0.376852 TTTGCACGCGCTATTCATCC 59.623 50.000 5.73 0.00 39.64 3.51
254 255 2.104144 CTTTTGCACGCGCTATTCATC 58.896 47.619 5.73 0.00 39.64 2.92
255 256 1.737236 TCTTTTGCACGCGCTATTCAT 59.263 42.857 5.73 0.00 39.64 2.57
256 257 1.152510 TCTTTTGCACGCGCTATTCA 58.847 45.000 5.73 0.00 39.64 2.57
257 258 2.458592 ATCTTTTGCACGCGCTATTC 57.541 45.000 5.73 0.00 39.64 1.75
258 259 4.152402 CCTATATCTTTTGCACGCGCTATT 59.848 41.667 5.73 0.00 39.64 1.73
259 260 3.679980 CCTATATCTTTTGCACGCGCTAT 59.320 43.478 5.73 0.00 39.64 2.97
260 261 3.057019 CCTATATCTTTTGCACGCGCTA 58.943 45.455 5.73 0.00 39.64 4.26
261 262 1.867233 CCTATATCTTTTGCACGCGCT 59.133 47.619 5.73 0.00 39.64 5.92
262 263 1.069906 CCCTATATCTTTTGCACGCGC 60.070 52.381 5.73 0.00 39.24 6.86
263 264 2.221055 GTCCCTATATCTTTTGCACGCG 59.779 50.000 3.53 3.53 0.00 6.01
264 265 3.202906 TGTCCCTATATCTTTTGCACGC 58.797 45.455 0.00 0.00 0.00 5.34
265 266 6.377327 AATTGTCCCTATATCTTTTGCACG 57.623 37.500 0.00 0.00 0.00 5.34
274 275 9.343539 GGGCTCAAATATAATTGTCCCTATATC 57.656 37.037 18.29 1.48 39.17 1.63
290 291 3.585289 TGACACAACTAGGGGCTCAAATA 59.415 43.478 0.00 0.00 0.00 1.40
616 617 6.095432 TCAAAATGTCCGGAAAAACATCAT 57.905 33.333 5.23 0.00 35.10 2.45
689 690 4.052159 TGACCGTTTGACCGTAACTTTA 57.948 40.909 0.00 0.00 0.00 1.85
713 714 5.789643 TTGCTCTTCTTATGTTTTTGCCT 57.210 34.783 0.00 0.00 0.00 4.75
827 828 3.120321 TGGTTGCCGTCACCATATATC 57.880 47.619 0.00 0.00 0.00 1.63
829 830 3.275143 CTTTGGTTGCCGTCACCATATA 58.725 45.455 0.00 0.00 33.06 0.86
849 850 1.254975 GGCGGGGTTTATTGGTTGCT 61.255 55.000 0.00 0.00 0.00 3.91
850 851 1.216977 GGCGGGGTTTATTGGTTGC 59.783 57.895 0.00 0.00 0.00 4.17
996 998 4.719369 AGAAGACGGGCGCGTGTC 62.719 66.667 34.38 26.99 35.33 3.67
1007 1009 2.767505 TGGGAAAGAAGCGAAGAAGAC 58.232 47.619 0.00 0.00 0.00 3.01
1010 1012 3.697045 TGTTTTGGGAAAGAAGCGAAGAA 59.303 39.130 0.00 0.00 0.00 2.52
1016 1018 2.362077 TGCTCTGTTTTGGGAAAGAAGC 59.638 45.455 0.00 0.00 0.00 3.86
1058 1060 1.725557 CCATGGATGTGCTCTGCTGC 61.726 60.000 5.56 0.00 0.00 5.25
1059 1061 1.725557 GCCATGGATGTGCTCTGCTG 61.726 60.000 18.40 0.00 0.00 4.41
1091 1098 4.700448 TAGGACGGCCGGGGTTCA 62.700 66.667 31.76 6.19 39.96 3.18
1092 1099 4.152964 GTAGGACGGCCGGGGTTC 62.153 72.222 31.76 17.81 39.96 3.62
1103 1110 2.017559 CTGGCTAGGCGGTGTAGGAC 62.018 65.000 16.85 0.00 0.00 3.85
1115 1122 1.069823 CTACTGTGGATGGCTGGCTAG 59.930 57.143 2.00 0.00 0.00 3.42
1118 1125 0.745845 CACTACTGTGGATGGCTGGC 60.746 60.000 0.00 0.00 40.33 4.85
1119 1126 0.745845 GCACTACTGTGGATGGCTGG 60.746 60.000 0.00 0.00 43.97 4.85
1122 1129 1.452108 GGGCACTACTGTGGATGGC 60.452 63.158 0.00 5.13 43.97 4.40
1127 1134 1.226974 CGATCGGGCACTACTGTGG 60.227 63.158 7.38 0.00 43.97 4.17
1129 1136 2.494918 GCGATCGGGCACTACTGT 59.505 61.111 18.30 0.00 0.00 3.55
1130 1137 2.279517 GGCGATCGGGCACTACTG 60.280 66.667 18.30 0.00 41.77 2.74
1131 1138 3.900892 CGGCGATCGGGCACTACT 61.901 66.667 18.30 0.00 42.43 2.57
1153 1160 1.651240 CCTCCACGGCAAGCTTCATG 61.651 60.000 0.00 0.00 0.00 3.07
1671 1681 2.066999 ATCCTCTCGGGGTCCAAGC 61.067 63.158 0.00 0.00 35.33 4.01
1694 1704 1.801913 CGCCAGAGAAGACGTTCCG 60.802 63.158 0.00 0.00 32.48 4.30
2533 2554 1.195115 AGATGAGCTTGGGCGAGTAA 58.805 50.000 0.00 0.00 44.37 2.24
2920 2953 3.998672 TGCTTGGTCCCCGTCGTC 61.999 66.667 0.00 0.00 0.00 4.20
4093 4534 1.153086 GATGAAGATGGCCGTGGCT 60.153 57.895 0.00 0.00 41.60 4.75
4204 4645 3.130160 GGCTGCTTGCTCCGGAAG 61.130 66.667 5.23 0.39 42.39 3.46
4280 4721 5.779241 AGAGAAGAGAAGAGAAGAGGAGA 57.221 43.478 0.00 0.00 0.00 3.71
4282 4723 6.012508 AGAGAAGAGAAGAGAAGAGAAGAGGA 60.013 42.308 0.00 0.00 0.00 3.71
4283 4724 6.183347 AGAGAAGAGAAGAGAAGAGAAGAGG 58.817 44.000 0.00 0.00 0.00 3.69
4284 4725 7.175641 ACAAGAGAAGAGAAGAGAAGAGAAGAG 59.824 40.741 0.00 0.00 0.00 2.85
4285 4726 7.004086 ACAAGAGAAGAGAAGAGAAGAGAAGA 58.996 38.462 0.00 0.00 0.00 2.87
4287 4728 7.595819 AACAAGAGAAGAGAAGAGAAGAGAA 57.404 36.000 0.00 0.00 0.00 2.87
4289 4730 8.661352 AAAAACAAGAGAAGAGAAGAGAAGAG 57.339 34.615 0.00 0.00 0.00 2.85
4384 5110 6.926826 ACAAAAGTGATCGATTGTGTAGTGTA 59.073 34.615 0.00 0.00 34.88 2.90
4385 5111 5.758296 ACAAAAGTGATCGATTGTGTAGTGT 59.242 36.000 0.00 0.00 34.88 3.55
4386 5112 6.146184 AGACAAAAGTGATCGATTGTGTAGTG 59.854 38.462 0.00 0.00 36.22 2.74
4387 5113 6.146184 CAGACAAAAGTGATCGATTGTGTAGT 59.854 38.462 0.00 0.00 36.22 2.73
4388 5114 6.146184 ACAGACAAAAGTGATCGATTGTGTAG 59.854 38.462 0.00 5.09 36.22 2.74
4389 5115 5.989168 ACAGACAAAAGTGATCGATTGTGTA 59.011 36.000 0.00 0.00 36.22 2.90
4390 5116 4.816385 ACAGACAAAAGTGATCGATTGTGT 59.184 37.500 0.00 5.46 36.22 3.72
4391 5117 5.142265 CACAGACAAAAGTGATCGATTGTG 58.858 41.667 0.00 2.16 37.97 3.33
4392 5118 4.816385 ACACAGACAAAAGTGATCGATTGT 59.184 37.500 0.00 0.00 39.03 2.71
4393 5119 5.050159 TCACACAGACAAAAGTGATCGATTG 60.050 40.000 0.00 0.00 39.03 2.67
4410 5137 7.430992 TTTTCAAGATTCTCTGATCACACAG 57.569 36.000 0.00 0.00 39.02 3.66
4428 5155 8.428063 TCCATTCCAAGCTTTCTTATTTTTCAA 58.572 29.630 0.00 0.00 0.00 2.69
4444 5176 6.678568 AGTATCTATCCACTCCATTCCAAG 57.321 41.667 0.00 0.00 0.00 3.61
4470 5202 2.069273 AGACGAAGCTTCCGAATGTTG 58.931 47.619 20.62 6.53 0.00 3.33
4478 5210 2.386661 TTGATGGAGACGAAGCTTCC 57.613 50.000 20.62 7.69 0.00 3.46
4487 5219 8.980481 TCTCCCTTTTAATTATTGATGGAGAC 57.020 34.615 13.20 0.00 40.55 3.36
4495 5236 9.358872 GCTTTGTTCTCTCCCTTTTAATTATTG 57.641 33.333 0.00 0.00 0.00 1.90
4497 5238 7.148069 CCGCTTTGTTCTCTCCCTTTTAATTAT 60.148 37.037 0.00 0.00 0.00 1.28
4501 5242 3.818773 CCGCTTTGTTCTCTCCCTTTTAA 59.181 43.478 0.00 0.00 0.00 1.52
4502 5243 3.408634 CCGCTTTGTTCTCTCCCTTTTA 58.591 45.455 0.00 0.00 0.00 1.52
4503 5244 2.230660 CCGCTTTGTTCTCTCCCTTTT 58.769 47.619 0.00 0.00 0.00 2.27
4504 5245 1.897560 CCGCTTTGTTCTCTCCCTTT 58.102 50.000 0.00 0.00 0.00 3.11
4505 5246 0.606673 GCCGCTTTGTTCTCTCCCTT 60.607 55.000 0.00 0.00 0.00 3.95
4560 5308 3.680475 GCACGGTATGGAATGTAGTGGAA 60.680 47.826 0.00 0.00 0.00 3.53
4579 5327 2.051345 CCGCACCGACAAAAGCAC 60.051 61.111 0.00 0.00 0.00 4.40
4581 5329 2.051345 CACCGCACCGACAAAAGC 60.051 61.111 0.00 0.00 0.00 3.51
4610 5363 6.325919 AGACACAGACAAAAGTGAAACAAA 57.674 33.333 0.00 0.00 41.43 2.83
4614 5367 6.417191 GTGTAGACACAGACAAAAGTGAAA 57.583 37.500 7.93 0.00 45.75 2.69
4630 5383 4.321082 GGTGTCTGACTAACTGGTGTAGAC 60.321 50.000 9.51 0.00 33.96 2.59
4658 5412 1.869767 GATGATGAAGATGGACACCGC 59.130 52.381 0.00 0.00 0.00 5.68
4659 5413 3.183793 TGATGATGAAGATGGACACCG 57.816 47.619 0.00 0.00 0.00 4.94
4661 5415 5.995897 TGATGATGATGATGAAGATGGACAC 59.004 40.000 0.00 0.00 0.00 3.67
4662 5416 6.182507 TGATGATGATGATGAAGATGGACA 57.817 37.500 0.00 0.00 0.00 4.02
4663 5417 6.879458 TGATGATGATGATGATGAAGATGGAC 59.121 38.462 0.00 0.00 0.00 4.02
4664 5418 7.016153 TGATGATGATGATGATGAAGATGGA 57.984 36.000 0.00 0.00 0.00 3.41
4665 5419 7.554118 TGATGATGATGATGATGATGAAGATGG 59.446 37.037 0.00 0.00 0.00 3.51
4666 5420 8.498054 TGATGATGATGATGATGATGAAGATG 57.502 34.615 0.00 0.00 0.00 2.90
4667 5421 9.336171 GATGATGATGATGATGATGATGAAGAT 57.664 33.333 0.00 0.00 0.00 2.40
4668 5422 8.321353 TGATGATGATGATGATGATGATGAAGA 58.679 33.333 0.00 0.00 0.00 2.87
4669 5423 8.498054 TGATGATGATGATGATGATGATGAAG 57.502 34.615 0.00 0.00 0.00 3.02
4670 5424 9.113838 GATGATGATGATGATGATGATGATGAA 57.886 33.333 0.00 0.00 0.00 2.57
4671 5425 8.489489 AGATGATGATGATGATGATGATGATGA 58.511 33.333 0.00 0.00 0.00 2.92
4672 5426 8.674263 AGATGATGATGATGATGATGATGATG 57.326 34.615 0.00 0.00 0.00 3.07
4673 5427 9.336171 GAAGATGATGATGATGATGATGATGAT 57.664 33.333 0.00 0.00 0.00 2.45
4674 5428 8.543774 AGAAGATGATGATGATGATGATGATGA 58.456 33.333 0.00 0.00 0.00 2.92
4675 5429 8.729805 AGAAGATGATGATGATGATGATGATG 57.270 34.615 0.00 0.00 0.00 3.07
4676 5430 9.389755 GAAGAAGATGATGATGATGATGATGAT 57.610 33.333 0.00 0.00 0.00 2.45
4677 5431 8.598041 AGAAGAAGATGATGATGATGATGATGA 58.402 33.333 0.00 0.00 0.00 2.92
4678 5432 8.785329 AGAAGAAGATGATGATGATGATGATG 57.215 34.615 0.00 0.00 0.00 3.07
4679 5433 9.443323 GAAGAAGAAGATGATGATGATGATGAT 57.557 33.333 0.00 0.00 0.00 2.45
4680 5434 8.652290 AGAAGAAGAAGATGATGATGATGATGA 58.348 33.333 0.00 0.00 0.00 2.92
4681 5435 8.840833 AGAAGAAGAAGATGATGATGATGATG 57.159 34.615 0.00 0.00 0.00 3.07
4682 5436 9.496873 GAAGAAGAAGAAGATGATGATGATGAT 57.503 33.333 0.00 0.00 0.00 2.45
4683 5437 8.706521 AGAAGAAGAAGAAGATGATGATGATGA 58.293 33.333 0.00 0.00 0.00 2.92
4684 5438 8.896320 AGAAGAAGAAGAAGATGATGATGATG 57.104 34.615 0.00 0.00 0.00 3.07
4685 5439 9.550406 GAAGAAGAAGAAGAAGATGATGATGAT 57.450 33.333 0.00 0.00 0.00 2.45
4686 5440 8.760735 AGAAGAAGAAGAAGAAGATGATGATGA 58.239 33.333 0.00 0.00 0.00 2.92
4687 5441 8.951787 AGAAGAAGAAGAAGAAGATGATGATG 57.048 34.615 0.00 0.00 0.00 3.07
4688 5442 9.603921 GAAGAAGAAGAAGAAGAAGATGATGAT 57.396 33.333 0.00 0.00 0.00 2.45
4689 5443 8.814931 AGAAGAAGAAGAAGAAGAAGATGATGA 58.185 33.333 0.00 0.00 0.00 2.92
4690 5444 9.439500 AAGAAGAAGAAGAAGAAGAAGATGATG 57.561 33.333 0.00 0.00 0.00 3.07
4691 5445 9.657419 GAAGAAGAAGAAGAAGAAGAAGATGAT 57.343 33.333 0.00 0.00 0.00 2.45
4692 5446 8.869109 AGAAGAAGAAGAAGAAGAAGAAGATGA 58.131 33.333 0.00 0.00 0.00 2.92
4693 5447 9.492973 AAGAAGAAGAAGAAGAAGAAGAAGATG 57.507 33.333 0.00 0.00 0.00 2.90
4694 5448 9.710900 GAAGAAGAAGAAGAAGAAGAAGAAGAT 57.289 33.333 0.00 0.00 0.00 2.40
4695 5449 8.923270 AGAAGAAGAAGAAGAAGAAGAAGAAGA 58.077 33.333 0.00 0.00 0.00 2.87
4696 5450 9.546428 AAGAAGAAGAAGAAGAAGAAGAAGAAG 57.454 33.333 0.00 0.00 0.00 2.85
4697 5451 9.898152 AAAGAAGAAGAAGAAGAAGAAGAAGAA 57.102 29.630 0.00 0.00 0.00 2.52
4698 5452 9.323985 CAAAGAAGAAGAAGAAGAAGAAGAAGA 57.676 33.333 0.00 0.00 0.00 2.87
4699 5453 8.558700 CCAAAGAAGAAGAAGAAGAAGAAGAAG 58.441 37.037 0.00 0.00 0.00 2.85
4759 5513 6.605995 AGGCTTTATTTATTCCCGTTAGCTTT 59.394 34.615 0.00 0.00 0.00 3.51
4769 5523 5.358160 AGCACAGTGAGGCTTTATTTATTCC 59.642 40.000 4.15 0.00 36.92 3.01
4795 5550 2.029244 CGTCGAACATGGAATACACTGC 59.971 50.000 0.00 0.00 0.00 4.40
4796 5551 3.303495 GTCGTCGAACATGGAATACACTG 59.697 47.826 0.00 0.00 0.00 3.66
4797 5552 3.192844 AGTCGTCGAACATGGAATACACT 59.807 43.478 0.00 0.00 0.00 3.55
4798 5553 3.303495 CAGTCGTCGAACATGGAATACAC 59.697 47.826 0.00 0.00 0.00 2.90
4809 5564 3.854286 ATGAAACAACAGTCGTCGAAC 57.146 42.857 0.00 0.00 0.00 3.95
4811 5566 3.449632 TGAATGAAACAACAGTCGTCGA 58.550 40.909 0.00 0.00 37.63 4.20
4814 5569 7.433708 TGAATATGAATGAAACAACAGTCGT 57.566 32.000 0.00 0.00 37.63 4.34
4850 5629 5.419788 ACCTTGATGCTGCATTCTGAATAAA 59.580 36.000 17.36 1.68 0.00 1.40
4861 5640 0.983467 TACTCCACCTTGATGCTGCA 59.017 50.000 4.13 4.13 0.00 4.41
4886 5668 7.010645 GGACAAGCTACTTTTAGAATGCTACTC 59.989 40.741 0.00 0.00 0.00 2.59
4887 5669 6.819146 GGACAAGCTACTTTTAGAATGCTACT 59.181 38.462 0.00 0.00 0.00 2.57
4951 5736 2.925170 AGCTGCCTCCGTGGAGTT 60.925 61.111 14.57 0.00 40.44 3.01
4958 5743 0.106335 AATCTCATCAGCTGCCTCCG 59.894 55.000 9.47 0.00 0.00 4.63
4959 5744 2.632028 TCTAATCTCATCAGCTGCCTCC 59.368 50.000 9.47 0.00 0.00 4.30
5014 5808 6.883217 ACCGTACCACTGTATATGTATAGGAG 59.117 42.308 0.00 0.00 0.00 3.69
5022 5816 5.413833 CCCTACTACCGTACCACTGTATATG 59.586 48.000 0.00 0.00 0.00 1.78
5024 5818 4.746702 GCCCTACTACCGTACCACTGTATA 60.747 50.000 0.00 0.00 0.00 1.47
5025 5819 3.825328 CCCTACTACCGTACCACTGTAT 58.175 50.000 0.00 0.00 0.00 2.29
5026 5820 2.683742 GCCCTACTACCGTACCACTGTA 60.684 54.545 0.00 0.00 0.00 2.74
5027 5821 1.957113 GCCCTACTACCGTACCACTGT 60.957 57.143 0.00 0.00 0.00 3.55
5028 5822 0.743097 GCCCTACTACCGTACCACTG 59.257 60.000 0.00 0.00 0.00 3.66
5037 5832 1.844497 ACAATGGAAGGCCCTACTACC 59.156 52.381 0.00 0.00 35.38 3.18
5043 5838 0.712380 ATTGGACAATGGAAGGCCCT 59.288 50.000 0.00 0.00 35.38 5.19
5083 5878 3.191371 GCCCACTTCACCACTTGATAAAG 59.809 47.826 0.00 0.00 32.84 1.85
5177 6917 5.120208 TCGCTTTACTTGAGCATTCTACAAC 59.880 40.000 0.00 0.00 40.13 3.32
5194 6934 4.516321 CCATCCATGATTGATGTCGCTTTA 59.484 41.667 5.87 0.00 38.32 1.85
5195 6935 3.317149 CCATCCATGATTGATGTCGCTTT 59.683 43.478 5.87 0.00 38.32 3.51
5196 6936 2.882761 CCATCCATGATTGATGTCGCTT 59.117 45.455 5.87 0.00 38.32 4.68
5198 6938 2.497138 TCCATCCATGATTGATGTCGC 58.503 47.619 5.87 0.00 38.32 5.19
5199 6939 3.439129 CCATCCATCCATGATTGATGTCG 59.561 47.826 13.77 1.12 39.22 4.35
5223 6985 2.888594 CAGTTTCTAAAGGCGATCCGA 58.111 47.619 0.00 0.00 37.47 4.55
5224 6986 1.327764 GCAGTTTCTAAAGGCGATCCG 59.672 52.381 0.00 0.00 37.47 4.18
5225 6987 2.096013 GTGCAGTTTCTAAAGGCGATCC 59.904 50.000 0.00 0.00 0.00 3.36
5226 6988 3.003480 AGTGCAGTTTCTAAAGGCGATC 58.997 45.455 0.00 0.00 0.00 3.69
5227 6989 3.059352 AGTGCAGTTTCTAAAGGCGAT 57.941 42.857 0.00 0.00 0.00 4.58
5228 6990 2.543777 AGTGCAGTTTCTAAAGGCGA 57.456 45.000 0.00 0.00 0.00 5.54
5229 6991 3.064207 TGTAGTGCAGTTTCTAAAGGCG 58.936 45.455 0.00 0.00 0.00 5.52
5230 6992 3.120649 CGTGTAGTGCAGTTTCTAAAGGC 60.121 47.826 0.00 0.00 0.00 4.35
5231 6993 3.432252 CCGTGTAGTGCAGTTTCTAAAGG 59.568 47.826 0.00 0.00 0.00 3.11
5232 6994 4.304110 TCCGTGTAGTGCAGTTTCTAAAG 58.696 43.478 0.00 0.00 0.00 1.85
5233 6995 4.325028 TCCGTGTAGTGCAGTTTCTAAA 57.675 40.909 0.00 0.00 0.00 1.85
5283 7045 9.339492 CTATGAAATGAGTGAAAGAAAAAGCTC 57.661 33.333 0.00 0.00 0.00 4.09
5285 7047 9.339492 CTCTATGAAATGAGTGAAAGAAAAAGC 57.661 33.333 0.00 0.00 0.00 3.51
5313 7087 3.434309 ACCTACCTTGAAAATGCATGCT 58.566 40.909 20.33 0.00 0.00 3.79
5326 7100 2.904434 CAACCACCTACTGACCTACCTT 59.096 50.000 0.00 0.00 0.00 3.50


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.