Multiple sequence alignment - TraesCS2A01G552200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G552200 chr2A 100.000 3448 0 0 1 3448 758450706 758447259 0.000000e+00 6368.0
1 TraesCS2A01G552200 chr2A 95.676 2590 93 7 1 2575 758471498 758468913 0.000000e+00 4145.0
2 TraesCS2A01G552200 chr2A 83.905 1050 130 21 1681 2701 41756826 41755787 0.000000e+00 966.0
3 TraesCS2A01G552200 chr2A 83.031 1049 140 22 1681 2705 41993384 41994418 0.000000e+00 917.0
4 TraesCS2A01G552200 chr2A 85.329 668 89 4 1000 1664 41992566 41993227 0.000000e+00 682.0
5 TraesCS2A01G552200 chr2A 80.750 400 49 10 469 865 58444737 58444363 1.570000e-73 287.0
6 TraesCS2A01G552200 chr2A 86.667 255 33 1 604 857 53613179 53613433 7.290000e-72 281.0
7 TraesCS2A01G552200 chr2A 86.207 232 32 0 2470 2701 41745320 41745089 5.710000e-63 252.0
8 TraesCS2A01G552200 chr2A 79.231 390 49 18 463 849 686869295 686868935 3.440000e-60 243.0
9 TraesCS2A01G552200 chr2B 96.094 1869 37 7 897 2731 770767618 770765752 0.000000e+00 3014.0
10 TraesCS2A01G552200 chr2B 85.584 659 90 4 1013 1670 64778600 64777946 0.000000e+00 686.0
11 TraesCS2A01G552200 chr2B 85.052 669 89 6 1000 1664 64856091 64856752 0.000000e+00 671.0
12 TraesCS2A01G552200 chr2B 89.097 321 34 1 2386 2705 64777173 64776853 6.930000e-107 398.0
13 TraesCS2A01G552200 chr2B 84.262 305 22 15 104 397 693181880 693182169 1.220000e-69 274.0
14 TraesCS2A01G552200 chr2B 91.176 170 4 5 2997 3163 770765746 770765585 1.610000e-53 220.0
15 TraesCS2A01G552200 chrUn 90.822 1351 104 7 992 2324 17299874 17298526 0.000000e+00 1790.0
16 TraesCS2A01G552200 chrUn 92.790 319 23 0 2386 2704 17298535 17298217 2.420000e-126 462.0
17 TraesCS2A01G552200 chrUn 79.638 221 16 9 92 307 108310475 108310279 7.760000e-27 132.0
18 TraesCS2A01G552200 chrUn 83.871 124 14 2 112 229 154951091 154950968 2.810000e-21 113.0
19 TraesCS2A01G552200 chrUn 83.871 124 14 2 112 229 155035148 155035025 2.810000e-21 113.0
20 TraesCS2A01G552200 chr2D 83.732 1045 134 22 1681 2701 37208881 37209913 0.000000e+00 955.0
21 TraesCS2A01G552200 chr2D 85.693 671 93 2 1000 1670 37055858 37055191 0.000000e+00 704.0
22 TraesCS2A01G552200 chr2D 84.799 671 99 2 1000 1670 37074490 37073823 0.000000e+00 671.0
23 TraesCS2A01G552200 chr2D 85.052 669 89 6 1000 1664 37208069 37208730 0.000000e+00 671.0
24 TraesCS2A01G552200 chr2D 88.785 321 35 1 2386 2705 37073040 37072720 3.230000e-105 392.0
25 TraesCS2A01G552200 chr2D 88.924 316 35 0 2386 2701 37054419 37054104 1.160000e-104 390.0
26 TraesCS2A01G552200 chr2D 92.975 242 17 0 2758 2999 155616774 155616533 1.520000e-93 353.0
27 TraesCS2A01G552200 chr2D 92.562 242 18 0 2757 2998 126046530 126046771 7.080000e-92 348.0
28 TraesCS2A01G552200 chr2D 80.952 294 24 17 92 379 554073837 554073570 1.620000e-48 204.0
29 TraesCS2A01G552200 chr2D 88.971 136 11 3 469 602 46820124 46819991 7.660000e-37 165.0
30 TraesCS2A01G552200 chr4B 88.620 413 46 1 1103 1515 416303944 416304355 5.140000e-138 501.0
31 TraesCS2A01G552200 chr4B 78.005 391 57 16 470 859 99749689 99749327 5.790000e-53 219.0
32 TraesCS2A01G552200 chr4B 87.640 178 22 0 605 782 592203973 592204150 1.250000e-49 207.0
33 TraesCS2A01G552200 chr4B 78.674 347 32 16 92 403 631886603 631886942 3.510000e-45 193.0
34 TraesCS2A01G552200 chr4B 78.997 319 27 16 92 379 468003597 468003906 7.600000e-42 182.0
35 TraesCS2A01G552200 chr4D 88.889 405 45 0 1111 1515 337150851 337151255 1.850000e-137 499.0
36 TraesCS2A01G552200 chr4D 82.642 386 38 10 472 857 82231194 82230838 7.180000e-82 315.0
37 TraesCS2A01G552200 chr4D 92.913 127 8 1 3321 3446 121553675 121553801 2.110000e-42 183.0
38 TraesCS2A01G552200 chr4D 90.476 63 1 5 2956 3018 349216905 349216962 1.030000e-10 78.7
39 TraesCS2A01G552200 chr4A 88.889 405 45 0 1111 1515 135616655 135616251 1.850000e-137 499.0
40 TraesCS2A01G552200 chr4A 92.562 242 18 0 2757 2998 685761048 685760807 7.080000e-92 348.0
41 TraesCS2A01G552200 chr4A 75.897 390 48 16 472 857 511227435 511227088 1.280000e-34 158.0
42 TraesCS2A01G552200 chr1A 99.592 245 0 1 2755 2998 454845103 454845347 2.440000e-121 446.0
43 TraesCS2A01G552200 chr1A 86.054 294 24 12 92 373 232331442 232331154 2.010000e-77 300.0
44 TraesCS2A01G552200 chr1A 86.923 260 32 1 600 857 592558393 592558134 1.210000e-74 291.0
45 TraesCS2A01G552200 chr1A 79.381 388 49 11 472 857 432010871 432011229 9.560000e-61 244.0
46 TraesCS2A01G552200 chr1A 84.977 213 29 3 649 859 516727859 516727648 2.700000e-51 213.0
47 TraesCS2A01G552200 chr7D 92.623 244 18 0 2756 2999 580004632 580004875 5.480000e-93 351.0
48 TraesCS2A01G552200 chr7D 81.654 387 44 9 472 857 474410093 474409733 2.600000e-76 296.0
49 TraesCS2A01G552200 chr7D 81.218 394 41 9 470 859 26384972 26384608 1.570000e-73 287.0
50 TraesCS2A01G552200 chr7D 86.381 257 34 1 604 859 608140820 608141076 2.620000e-71 279.0
51 TraesCS2A01G552200 chr7D 83.228 316 25 7 92 379 593539470 593539155 7.340000e-67 265.0
52 TraesCS2A01G552200 chr7D 92.913 127 8 1 3321 3446 466815904 466816030 2.110000e-42 183.0
53 TraesCS2A01G552200 chr7D 91.339 127 10 1 3321 3446 340875413 340875539 4.570000e-39 172.0
54 TraesCS2A01G552200 chr7D 92.453 53 2 2 545 597 608140788 608140838 1.330000e-09 75.0
55 TraesCS2A01G552200 chr7D 83.117 77 13 0 370 446 40028607 40028531 1.720000e-08 71.3
56 TraesCS2A01G552200 chr3A 92.946 241 17 0 2758 2998 636846326 636846566 5.480000e-93 351.0
57 TraesCS2A01G552200 chr6B 92.593 243 18 0 2758 3000 567881783 567881541 1.970000e-92 350.0
58 TraesCS2A01G552200 chr6B 87.645 259 31 1 600 857 8056502 8056244 2.010000e-77 300.0
59 TraesCS2A01G552200 chr6B 86.473 207 15 9 182 379 706517889 706517687 7.490000e-52 215.0
60 TraesCS2A01G552200 chr6B 92.000 75 6 0 359 433 92523326 92523400 4.710000e-19 106.0
61 TraesCS2A01G552200 chr5B 91.968 249 20 0 2751 2999 543286992 543286744 1.970000e-92 350.0
62 TraesCS2A01G552200 chr5B 83.108 296 37 7 92 379 38514243 38514533 1.230000e-64 257.0
63 TraesCS2A01G552200 chr5B 82.867 286 33 9 92 370 562455087 562454811 3.440000e-60 243.0
64 TraesCS2A01G552200 chr5B 77.709 323 38 15 471 792 362805136 362805425 2.130000e-37 167.0
65 TraesCS2A01G552200 chr5B 77.090 323 40 15 471 792 362773259 362773548 4.610000e-34 156.0
66 TraesCS2A01G552200 chr1D 90.945 254 22 1 2745 2998 227919507 227919759 1.190000e-89 340.0
67 TraesCS2A01G552200 chr1D 82.188 320 24 6 92 379 73314806 73315124 9.560000e-61 244.0
68 TraesCS2A01G552200 chr1D 87.619 210 17 4 92 300 417249129 417248928 5.750000e-58 235.0
69 TraesCS2A01G552200 chr1D 81.419 296 24 6 92 379 487553085 487553357 2.700000e-51 213.0
70 TraesCS2A01G552200 chr1D 80.069 291 36 9 93 379 362783177 362782905 2.710000e-46 196.0
71 TraesCS2A01G552200 chr1D 88.496 113 13 0 360 472 16205467 16205579 1.670000e-28 137.0
72 TraesCS2A01G552200 chr5D 86.926 283 25 6 92 366 412336209 412335931 1.200000e-79 307.0
73 TraesCS2A01G552200 chr5D 85.547 256 36 1 604 859 423272630 423272376 2.040000e-67 267.0
74 TraesCS2A01G552200 chr5D 84.528 265 32 7 602 863 106805758 106806016 1.590000e-63 254.0
75 TraesCS2A01G552200 chr5D 89.617 183 18 1 92 273 485377825 485377643 7.440000e-57 231.0
76 TraesCS2A01G552200 chr5D 79.769 346 28 20 92 403 361140250 361140587 2.700000e-51 213.0
77 TraesCS2A01G552200 chr5D 91.339 127 10 1 3321 3446 500022218 500022092 4.570000e-39 172.0
78 TraesCS2A01G552200 chr5D 88.785 107 11 1 359 465 69326113 69326218 2.790000e-26 130.0
79 TraesCS2A01G552200 chr5D 82.249 169 11 13 199 356 445654700 445654860 1.000000e-25 128.0
80 TraesCS2A01G552200 chr3D 87.259 259 32 1 599 857 416200006 416200263 9.360000e-76 294.0
81 TraesCS2A01G552200 chr3D 85.156 256 36 1 606 859 68051756 68051501 9.490000e-66 261.0
82 TraesCS2A01G552200 chr3D 79.661 354 34 15 92 420 587386720 587386380 1.610000e-53 220.0
83 TraesCS2A01G552200 chr3D 93.701 127 7 1 3321 3446 36764162 36764036 4.540000e-44 189.0
84 TraesCS2A01G552200 chr3D 91.339 127 10 1 3321 3446 314123253 314123379 4.570000e-39 172.0
85 TraesCS2A01G552200 chr3D 87.356 87 11 0 12 98 182327104 182327018 2.190000e-17 100.0
86 TraesCS2A01G552200 chr7A 86.538 260 34 1 599 857 610704307 610704048 5.630000e-73 285.0
87 TraesCS2A01G552200 chr7B 84.962 266 37 3 602 866 11679033 11678770 2.040000e-67 267.0
88 TraesCS2A01G552200 chr7B 84.116 277 40 3 595 869 577306599 577306325 7.340000e-67 265.0
89 TraesCS2A01G552200 chr6A 85.714 224 30 2 635 857 443418276 443418498 5.750000e-58 235.0
90 TraesCS2A01G552200 chr6A 87.143 210 24 2 649 857 534950770 534950563 5.750000e-58 235.0
91 TraesCS2A01G552200 chr6A 79.251 347 29 14 92 403 11535720 11535382 5.830000e-48 202.0
92 TraesCS2A01G552200 chr6A 79.094 287 29 9 94 352 609481736 609481453 5.920000e-38 169.0
93 TraesCS2A01G552200 chr6A 86.232 138 10 4 121 251 130363379 130363514 1.290000e-29 141.0
94 TraesCS2A01G552200 chr6D 92.913 127 8 1 3321 3446 358599584 358599458 2.110000e-42 183.0
95 TraesCS2A01G552200 chr6D 92.126 127 9 1 3321 3446 107673345 107673471 9.830000e-41 178.0
96 TraesCS2A01G552200 chr6D 91.818 110 6 2 121 227 106888582 106888691 2.140000e-32 150.0
97 TraesCS2A01G552200 chr6D 85.714 98 14 0 368 465 306351784 306351687 1.690000e-18 104.0
98 TraesCS2A01G552200 chr1B 91.339 127 10 1 3321 3446 287796038 287795912 4.570000e-39 172.0
99 TraesCS2A01G552200 chr1B 89.744 117 11 1 359 475 530955630 530955515 7.710000e-32 148.0
100 TraesCS2A01G552200 chr3B 82.822 163 25 3 309 470 691354017 691354177 3.590000e-30 143.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G552200 chr2A 758447259 758450706 3447 True 6368.0 6368 100.0000 1 3448 1 chr2A.!!$R5 3447
1 TraesCS2A01G552200 chr2A 758468913 758471498 2585 True 4145.0 4145 95.6760 1 2575 1 chr2A.!!$R6 2574
2 TraesCS2A01G552200 chr2A 41755787 41756826 1039 True 966.0 966 83.9050 1681 2701 1 chr2A.!!$R2 1020
3 TraesCS2A01G552200 chr2A 41992566 41994418 1852 False 799.5 917 84.1800 1000 2705 2 chr2A.!!$F2 1705
4 TraesCS2A01G552200 chr2B 770765585 770767618 2033 True 1617.0 3014 93.6350 897 3163 2 chr2B.!!$R2 2266
5 TraesCS2A01G552200 chr2B 64856091 64856752 661 False 671.0 671 85.0520 1000 1664 1 chr2B.!!$F1 664
6 TraesCS2A01G552200 chr2B 64776853 64778600 1747 True 542.0 686 87.3405 1013 2705 2 chr2B.!!$R1 1692
7 TraesCS2A01G552200 chrUn 17298217 17299874 1657 True 1126.0 1790 91.8060 992 2704 2 chrUn.!!$R4 1712
8 TraesCS2A01G552200 chr2D 37208069 37209913 1844 False 813.0 955 84.3920 1000 2701 2 chr2D.!!$F2 1701
9 TraesCS2A01G552200 chr2D 37054104 37055858 1754 True 547.0 704 87.3085 1000 2701 2 chr2D.!!$R4 1701
10 TraesCS2A01G552200 chr2D 37072720 37074490 1770 True 531.5 671 86.7920 1000 2705 2 chr2D.!!$R5 1705

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
771 772 0.661187 CAGCGCGTGTTGAAGCAAAT 60.661 50.0 8.43 0.00 0.0 2.32 F
1610 1614 0.661552 GTCTACATCAGCGTCGCCTA 59.338 55.0 14.86 2.04 0.0 3.93 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1998 2185 1.08992 CAATCACCGCCTTCTCCTTG 58.910 55.0 0.0 0.0 0.00 3.61 R
3113 3350 0.16747 CAATGAAGCACAGGCAGTCG 59.833 55.0 0.0 0.0 44.61 4.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
67 68 2.423290 GATCTTCGAGCTACCCCGGC 62.423 65.000 0.00 0.00 0.00 6.13
119 120 1.814169 GGCGATCCTCGTTGGGAAC 60.814 63.158 0.00 0.00 42.81 3.62
139 140 2.805546 GCGTGGCTCGATACCTCA 59.194 61.111 13.77 0.00 42.86 3.86
172 173 2.527887 CGAGAATGACAATGACGACTCG 59.472 50.000 0.00 0.00 39.49 4.18
253 254 7.237209 TCTATGCTATGATGAACTATGTGCT 57.763 36.000 0.00 0.00 0.00 4.40
254 255 8.353423 TCTATGCTATGATGAACTATGTGCTA 57.647 34.615 0.00 0.00 0.00 3.49
337 338 2.091541 AGTTCGGGGTGCATATGTTTG 58.908 47.619 4.29 0.00 0.00 2.93
340 341 1.003696 TCGGGGTGCATATGTTTGTGA 59.996 47.619 4.29 0.00 0.00 3.58
351 352 3.105782 TTTGTGAGAGAGCGCGCG 61.106 61.111 28.44 28.44 0.00 6.86
363 364 1.647283 GCGCGCGCAGTATGTTTAC 60.647 57.895 46.11 15.04 41.49 2.01
367 368 1.526986 GCGCGCAGTATGTTTACAGTG 60.527 52.381 29.10 0.00 39.31 3.66
466 467 1.040646 TGGGCGGCTGTTAGAGATAG 58.959 55.000 9.56 0.00 0.00 2.08
501 502 3.067106 CCAACAGAAGCACGATGTAAGT 58.933 45.455 0.00 0.00 0.00 2.24
534 535 7.520686 GGTATAAAAACTACTTTTAGCGCACA 58.479 34.615 11.47 0.00 41.62 4.57
622 623 1.792367 TGCGCGCTATAAGTAATGCAG 59.208 47.619 33.29 0.00 0.00 4.41
647 648 3.488489 GCGCATTAAAAAGACATCACGT 58.512 40.909 0.30 0.00 0.00 4.49
668 669 1.070577 GCAGCATATTTAGTGCGTCCG 60.071 52.381 0.00 0.00 46.86 4.79
672 673 1.784856 CATATTTAGTGCGTCCGGTCG 59.215 52.381 17.02 17.02 0.00 4.79
697 698 1.285023 CTGCAAACTCTGTGCTGCC 59.715 57.895 0.00 0.00 42.69 4.85
733 734 2.595009 GATTGGGACCGCTGGACTCC 62.595 65.000 1.50 0.00 0.00 3.85
747 748 0.661780 GACTCCTGCGCGCAGTATAG 60.662 60.000 46.97 40.11 42.15 1.31
764 765 2.137129 TAGTTTACAGCGCGTGTTGA 57.863 45.000 20.05 0.44 40.94 3.18
771 772 0.661187 CAGCGCGTGTTGAAGCAAAT 60.661 50.000 8.43 0.00 0.00 2.32
782 783 4.821260 TGTTGAAGCAAATGTCTTCTAGCA 59.179 37.500 14.30 9.74 40.31 3.49
802 803 4.459337 AGCATCCTAAAAACCTACTTGCAC 59.541 41.667 0.00 0.00 0.00 4.57
812 813 6.569179 AAACCTACTTGCACGATGTAAATT 57.431 33.333 0.00 0.00 0.00 1.82
836 837 4.761845 TTGGGCGCCGCGTATTGA 62.762 61.111 22.54 0.00 0.00 2.57
1610 1614 0.661552 GTCTACATCAGCGTCGCCTA 59.338 55.000 14.86 2.04 0.00 3.93
1620 1624 2.348888 CGTCGCCTACAACCTCCCT 61.349 63.158 0.00 0.00 0.00 4.20
1998 2185 1.672145 GGGTACTCGTTCCTGCTCAAC 60.672 57.143 0.00 0.00 0.00 3.18
2394 2628 3.441222 TGAATTAACATGAGCTGCAGGTG 59.559 43.478 25.60 11.84 41.31 4.00
2589 2823 0.672401 ATCAACAACGGCGGGTACAG 60.672 55.000 13.24 3.51 0.00 2.74
2727 2961 1.440850 CAACGTTCGTGCATGGCAG 60.441 57.895 5.98 0.10 40.08 4.85
2731 2965 3.740397 TTCGTGCATGGCAGCAGC 61.740 61.111 5.98 7.08 46.69 5.25
2733 2967 3.822192 CGTGCATGGCAGCAGCAT 61.822 61.111 13.85 0.00 46.69 3.79
2734 2968 2.202743 GTGCATGGCAGCAGCATG 60.203 61.111 13.85 8.20 46.69 4.06
2761 2995 5.300969 TGCATTGCATGAGAAAACTACTC 57.699 39.130 7.38 0.00 31.71 2.59
2762 2996 4.156556 TGCATTGCATGAGAAAACTACTCC 59.843 41.667 7.38 0.00 31.71 3.85
2763 2997 4.439289 GCATTGCATGAGAAAACTACTCCC 60.439 45.833 3.15 0.00 33.95 4.30
2764 2998 4.640771 TTGCATGAGAAAACTACTCCCT 57.359 40.909 0.00 0.00 33.95 4.20
2765 2999 4.207891 TGCATGAGAAAACTACTCCCTC 57.792 45.455 0.00 0.00 33.95 4.30
2766 3000 3.055094 TGCATGAGAAAACTACTCCCTCC 60.055 47.826 0.00 0.00 33.95 4.30
2767 3001 3.198853 GCATGAGAAAACTACTCCCTCCT 59.801 47.826 0.00 0.00 33.95 3.69
2768 3002 4.323868 GCATGAGAAAACTACTCCCTCCTT 60.324 45.833 0.00 0.00 33.95 3.36
2769 3003 5.423886 CATGAGAAAACTACTCCCTCCTTC 58.576 45.833 0.00 0.00 33.95 3.46
2770 3004 3.838903 TGAGAAAACTACTCCCTCCTTCC 59.161 47.826 0.00 0.00 33.95 3.46
2771 3005 3.838903 GAGAAAACTACTCCCTCCTTCCA 59.161 47.826 0.00 0.00 0.00 3.53
2772 3006 4.439860 AGAAAACTACTCCCTCCTTCCAT 58.560 43.478 0.00 0.00 0.00 3.41
2773 3007 4.471747 AGAAAACTACTCCCTCCTTCCATC 59.528 45.833 0.00 0.00 0.00 3.51
2774 3008 3.786213 AACTACTCCCTCCTTCCATCT 57.214 47.619 0.00 0.00 0.00 2.90
2775 3009 4.901785 AACTACTCCCTCCTTCCATCTA 57.098 45.455 0.00 0.00 0.00 1.98
2776 3010 5.426325 AACTACTCCCTCCTTCCATCTAT 57.574 43.478 0.00 0.00 0.00 1.98
2777 3011 6.547396 AACTACTCCCTCCTTCCATCTATA 57.453 41.667 0.00 0.00 0.00 1.31
2778 3012 6.744802 ACTACTCCCTCCTTCCATCTATAT 57.255 41.667 0.00 0.00 0.00 0.86
2779 3013 7.848821 ACTACTCCCTCCTTCCATCTATATA 57.151 40.000 0.00 0.00 0.00 0.86
2780 3014 7.878495 ACTACTCCCTCCTTCCATCTATATAG 58.122 42.308 3.10 3.10 0.00 1.31
2781 3015 6.098716 ACTCCCTCCTTCCATCTATATAGG 57.901 45.833 9.89 0.00 0.00 2.57
2782 3016 5.042979 ACTCCCTCCTTCCATCTATATAGGG 60.043 48.000 9.89 4.49 43.23 3.53
2783 3017 3.970640 CCCTCCTTCCATCTATATAGGGC 59.029 52.174 9.89 0.00 36.30 5.19
2784 3018 3.970640 CCTCCTTCCATCTATATAGGGCC 59.029 52.174 9.89 0.00 0.00 5.80
2785 3019 4.327332 CCTCCTTCCATCTATATAGGGCCT 60.327 50.000 12.58 12.58 0.00 5.19
2786 3020 5.103043 CCTCCTTCCATCTATATAGGGCCTA 60.103 48.000 17.16 17.16 0.00 3.93
2787 3021 6.432190 TCCTTCCATCTATATAGGGCCTAA 57.568 41.667 18.91 7.61 0.00 2.69
2788 3022 7.009960 TCCTTCCATCTATATAGGGCCTAAT 57.990 40.000 18.91 14.19 0.00 1.73
2789 3023 6.846505 TCCTTCCATCTATATAGGGCCTAATG 59.153 42.308 18.91 15.42 0.00 1.90
2790 3024 6.465035 CCTTCCATCTATATAGGGCCTAATGC 60.465 46.154 18.91 0.00 40.16 3.56
2791 3025 4.588951 TCCATCTATATAGGGCCTAATGCG 59.411 45.833 18.91 10.04 42.61 4.73
2792 3026 4.345257 CCATCTATATAGGGCCTAATGCGT 59.655 45.833 18.91 2.76 42.61 5.24
2793 3027 5.163301 CCATCTATATAGGGCCTAATGCGTT 60.163 44.000 18.91 1.94 42.61 4.84
2794 3028 6.349300 CATCTATATAGGGCCTAATGCGTTT 58.651 40.000 18.91 1.12 42.61 3.60
2795 3029 6.368779 TCTATATAGGGCCTAATGCGTTTT 57.631 37.500 18.91 0.30 42.61 2.43
2796 3030 6.775708 TCTATATAGGGCCTAATGCGTTTTT 58.224 36.000 18.91 0.00 42.61 1.94
2797 3031 5.959618 ATATAGGGCCTAATGCGTTTTTC 57.040 39.130 18.91 0.00 42.61 2.29
2798 3032 1.917872 AGGGCCTAATGCGTTTTTCA 58.082 45.000 2.82 0.00 42.61 2.69
2799 3033 2.243810 AGGGCCTAATGCGTTTTTCAA 58.756 42.857 2.82 0.00 42.61 2.69
2800 3034 2.231235 AGGGCCTAATGCGTTTTTCAAG 59.769 45.455 2.82 0.00 42.61 3.02
2801 3035 2.230266 GGGCCTAATGCGTTTTTCAAGA 59.770 45.455 0.84 0.00 42.61 3.02
2802 3036 3.242518 GGCCTAATGCGTTTTTCAAGAC 58.757 45.455 0.00 0.00 42.61 3.01
2803 3037 3.242518 GCCTAATGCGTTTTTCAAGACC 58.757 45.455 0.00 0.00 0.00 3.85
2804 3038 3.488489 CCTAATGCGTTTTTCAAGACCG 58.512 45.455 0.00 0.00 0.00 4.79
2805 3039 1.766069 AATGCGTTTTTCAAGACCGC 58.234 45.000 0.00 0.00 44.27 5.68
2806 3040 0.039527 ATGCGTTTTTCAAGACCGCC 60.040 50.000 0.00 0.00 43.44 6.13
2807 3041 1.098712 TGCGTTTTTCAAGACCGCCT 61.099 50.000 0.00 0.00 43.44 5.52
2808 3042 0.030235 GCGTTTTTCAAGACCGCCTT 59.970 50.000 0.00 0.00 38.52 4.35
2809 3043 1.535226 GCGTTTTTCAAGACCGCCTTT 60.535 47.619 0.00 0.00 38.52 3.11
2810 3044 2.116366 CGTTTTTCAAGACCGCCTTTG 58.884 47.619 0.00 0.00 31.42 2.77
2811 3045 2.223386 CGTTTTTCAAGACCGCCTTTGA 60.223 45.455 0.00 0.00 31.42 2.69
2812 3046 3.113322 GTTTTTCAAGACCGCCTTTGAC 58.887 45.455 0.00 0.00 31.42 3.18
2813 3047 2.341846 TTTCAAGACCGCCTTTGACT 57.658 45.000 0.00 0.00 31.42 3.41
2814 3048 3.478857 TTTCAAGACCGCCTTTGACTA 57.521 42.857 0.00 0.00 31.42 2.59
2815 3049 3.695830 TTCAAGACCGCCTTTGACTAT 57.304 42.857 0.00 0.00 31.42 2.12
2816 3050 3.695830 TCAAGACCGCCTTTGACTATT 57.304 42.857 0.00 0.00 31.42 1.73
2817 3051 3.334691 TCAAGACCGCCTTTGACTATTG 58.665 45.455 0.00 0.00 31.42 1.90
2818 3052 3.007506 TCAAGACCGCCTTTGACTATTGA 59.992 43.478 0.00 0.00 31.42 2.57
2819 3053 2.973945 AGACCGCCTTTGACTATTGAC 58.026 47.619 0.00 0.00 0.00 3.18
2820 3054 2.301870 AGACCGCCTTTGACTATTGACA 59.698 45.455 0.00 0.00 0.00 3.58
2821 3055 3.071479 GACCGCCTTTGACTATTGACAA 58.929 45.455 0.00 0.00 0.00 3.18
2822 3056 3.482436 ACCGCCTTTGACTATTGACAAA 58.518 40.909 4.99 4.99 36.66 2.83
2823 3057 3.886505 ACCGCCTTTGACTATTGACAAAA 59.113 39.130 6.32 0.00 37.38 2.44
2824 3058 4.522789 ACCGCCTTTGACTATTGACAAAAT 59.477 37.500 6.32 0.00 37.38 1.82
2825 3059 5.010617 ACCGCCTTTGACTATTGACAAAATT 59.989 36.000 6.32 0.00 37.38 1.82
2826 3060 6.207810 ACCGCCTTTGACTATTGACAAAATTA 59.792 34.615 6.32 0.00 37.38 1.40
2827 3061 7.087639 CCGCCTTTGACTATTGACAAAATTAA 58.912 34.615 6.32 0.00 37.38 1.40
2828 3062 7.759433 CCGCCTTTGACTATTGACAAAATTAAT 59.241 33.333 6.32 0.00 37.38 1.40
2829 3063 9.781834 CGCCTTTGACTATTGACAAAATTAATA 57.218 29.630 6.32 0.00 37.38 0.98
2888 3122 7.519032 TGAAACCTCCTTTCAAATACGAATT 57.481 32.000 0.00 0.00 44.42 2.17
2889 3123 7.947282 TGAAACCTCCTTTCAAATACGAATTT 58.053 30.769 0.00 0.00 44.42 1.82
2903 3137 8.442605 AAATACGAATTTGACGGTATGTTTTG 57.557 30.769 0.00 0.00 33.97 2.44
2904 3138 5.427036 ACGAATTTGACGGTATGTTTTGT 57.573 34.783 0.00 0.00 34.93 2.83
2905 3139 5.209240 ACGAATTTGACGGTATGTTTTGTG 58.791 37.500 0.00 0.00 34.93 3.33
2906 3140 5.209240 CGAATTTGACGGTATGTTTTGTGT 58.791 37.500 0.00 0.00 0.00 3.72
2907 3141 6.018098 ACGAATTTGACGGTATGTTTTGTGTA 60.018 34.615 0.00 0.00 34.93 2.90
2908 3142 6.851837 CGAATTTGACGGTATGTTTTGTGTAA 59.148 34.615 0.00 0.00 0.00 2.41
2909 3143 7.059033 CGAATTTGACGGTATGTTTTGTGTAAG 59.941 37.037 0.00 0.00 0.00 2.34
2910 3144 6.680874 TTTGACGGTATGTTTTGTGTAAGT 57.319 33.333 0.00 0.00 0.00 2.24
2911 3145 6.680874 TTGACGGTATGTTTTGTGTAAGTT 57.319 33.333 0.00 0.00 0.00 2.66
2912 3146 6.050454 TGACGGTATGTTTTGTGTAAGTTG 57.950 37.500 0.00 0.00 0.00 3.16
2913 3147 4.851010 ACGGTATGTTTTGTGTAAGTTGC 58.149 39.130 0.00 0.00 0.00 4.17
2914 3148 4.335874 ACGGTATGTTTTGTGTAAGTTGCA 59.664 37.500 0.00 0.00 0.00 4.08
2915 3149 5.009210 ACGGTATGTTTTGTGTAAGTTGCAT 59.991 36.000 0.00 0.00 0.00 3.96
2916 3150 5.341993 CGGTATGTTTTGTGTAAGTTGCATG 59.658 40.000 0.00 0.00 0.00 4.06
2917 3151 6.212955 GGTATGTTTTGTGTAAGTTGCATGT 58.787 36.000 0.00 0.00 0.00 3.21
2918 3152 6.362283 GGTATGTTTTGTGTAAGTTGCATGTC 59.638 38.462 0.00 0.00 0.00 3.06
2919 3153 5.316327 TGTTTTGTGTAAGTTGCATGTCA 57.684 34.783 0.00 0.00 0.00 3.58
2920 3154 5.900425 TGTTTTGTGTAAGTTGCATGTCAT 58.100 33.333 0.00 0.00 0.00 3.06
2921 3155 7.032377 TGTTTTGTGTAAGTTGCATGTCATA 57.968 32.000 0.00 0.00 0.00 2.15
2922 3156 7.656412 TGTTTTGTGTAAGTTGCATGTCATAT 58.344 30.769 0.00 0.00 0.00 1.78
2923 3157 8.787852 TGTTTTGTGTAAGTTGCATGTCATATA 58.212 29.630 0.00 0.00 0.00 0.86
2924 3158 9.061610 GTTTTGTGTAAGTTGCATGTCATATAC 57.938 33.333 0.00 0.00 0.00 1.47
2925 3159 8.560355 TTTGTGTAAGTTGCATGTCATATACT 57.440 30.769 0.00 0.00 0.00 2.12
2926 3160 9.660180 TTTGTGTAAGTTGCATGTCATATACTA 57.340 29.630 0.00 0.00 0.00 1.82
2927 3161 9.830975 TTGTGTAAGTTGCATGTCATATACTAT 57.169 29.630 0.00 0.00 0.00 2.12
2928 3162 9.830975 TGTGTAAGTTGCATGTCATATACTATT 57.169 29.630 0.00 0.00 0.00 1.73
2930 3164 9.830975 TGTAAGTTGCATGTCATATACTATTGT 57.169 29.630 0.00 0.00 0.00 2.71
2933 3167 9.618890 AAGTTGCATGTCATATACTATTGTTCT 57.381 29.630 0.00 0.00 0.00 3.01
2941 3175 9.908152 TGTCATATACTATTGTTCTAACATCCG 57.092 33.333 0.00 0.00 38.95 4.18
2942 3176 9.355215 GTCATATACTATTGTTCTAACATCCGG 57.645 37.037 0.00 0.00 38.95 5.14
2943 3177 9.085645 TCATATACTATTGTTCTAACATCCGGT 57.914 33.333 0.00 0.00 38.95 5.28
2944 3178 9.355215 CATATACTATTGTTCTAACATCCGGTC 57.645 37.037 0.00 0.00 38.95 4.79
2945 3179 5.670792 ACTATTGTTCTAACATCCGGTCA 57.329 39.130 0.00 0.00 38.95 4.02
2946 3180 6.045072 ACTATTGTTCTAACATCCGGTCAA 57.955 37.500 0.00 0.00 38.95 3.18
2947 3181 6.469410 ACTATTGTTCTAACATCCGGTCAAA 58.531 36.000 0.00 0.00 38.95 2.69
2948 3182 5.880054 ATTGTTCTAACATCCGGTCAAAG 57.120 39.130 0.00 0.00 38.95 2.77
2949 3183 4.345859 TGTTCTAACATCCGGTCAAAGT 57.654 40.909 0.00 0.00 33.17 2.66
2950 3184 4.710324 TGTTCTAACATCCGGTCAAAGTT 58.290 39.130 0.00 3.28 33.17 2.66
2951 3185 5.856156 TGTTCTAACATCCGGTCAAAGTTA 58.144 37.500 0.00 4.29 33.17 2.24
2952 3186 5.929992 TGTTCTAACATCCGGTCAAAGTTAG 59.070 40.000 18.81 18.81 41.67 2.34
2953 3187 4.501071 TCTAACATCCGGTCAAAGTTAGC 58.499 43.478 19.49 0.00 40.68 3.09
2954 3188 2.851263 ACATCCGGTCAAAGTTAGCA 57.149 45.000 0.00 0.00 0.00 3.49
2955 3189 3.350219 ACATCCGGTCAAAGTTAGCAT 57.650 42.857 0.00 0.00 0.00 3.79
2956 3190 3.686016 ACATCCGGTCAAAGTTAGCATT 58.314 40.909 0.00 0.00 0.00 3.56
2957 3191 3.440173 ACATCCGGTCAAAGTTAGCATTG 59.560 43.478 0.00 0.00 0.00 2.82
2958 3192 3.410631 TCCGGTCAAAGTTAGCATTGA 57.589 42.857 0.00 0.00 33.37 2.57
2959 3193 3.745799 TCCGGTCAAAGTTAGCATTGAA 58.254 40.909 0.00 0.00 37.31 2.69
2960 3194 4.138290 TCCGGTCAAAGTTAGCATTGAAA 58.862 39.130 0.00 0.00 37.31 2.69
2961 3195 4.580995 TCCGGTCAAAGTTAGCATTGAAAA 59.419 37.500 0.00 0.00 37.31 2.29
2962 3196 5.067936 TCCGGTCAAAGTTAGCATTGAAAAA 59.932 36.000 0.00 0.00 37.31 1.94
2963 3197 5.174943 CCGGTCAAAGTTAGCATTGAAAAAC 59.825 40.000 0.00 0.00 37.31 2.43
2964 3198 5.108405 CGGTCAAAGTTAGCATTGAAAAACG 60.108 40.000 0.00 0.00 37.31 3.60
2965 3199 5.332280 GGTCAAAGTTAGCATTGAAAAACGC 60.332 40.000 0.00 0.00 37.31 4.84
2966 3200 5.231147 GTCAAAGTTAGCATTGAAAAACGCA 59.769 36.000 0.00 0.00 37.31 5.24
2967 3201 5.982516 TCAAAGTTAGCATTGAAAAACGCAT 59.017 32.000 0.00 0.00 32.89 4.73
2968 3202 6.478344 TCAAAGTTAGCATTGAAAAACGCATT 59.522 30.769 0.00 0.00 32.89 3.56
2969 3203 7.649705 TCAAAGTTAGCATTGAAAAACGCATTA 59.350 29.630 0.00 0.00 32.89 1.90
2970 3204 7.566858 AAGTTAGCATTGAAAAACGCATTAG 57.433 32.000 0.00 0.00 31.40 1.73
2971 3205 6.092748 AGTTAGCATTGAAAAACGCATTAGG 58.907 36.000 0.00 0.00 31.40 2.69
2972 3206 3.253230 AGCATTGAAAAACGCATTAGGC 58.747 40.909 0.00 0.00 39.90 3.93
2973 3207 2.348362 GCATTGAAAAACGCATTAGGCC 59.652 45.455 0.00 0.00 40.31 5.19
2974 3208 2.734276 TTGAAAAACGCATTAGGCCC 57.266 45.000 0.00 0.00 40.31 5.80
2975 3209 1.917872 TGAAAAACGCATTAGGCCCT 58.082 45.000 0.00 0.00 40.31 5.19
2976 3210 3.074675 TGAAAAACGCATTAGGCCCTA 57.925 42.857 0.00 0.00 40.31 3.53
2977 3211 3.626930 TGAAAAACGCATTAGGCCCTAT 58.373 40.909 0.00 0.00 40.31 2.57
2978 3212 4.783055 TGAAAAACGCATTAGGCCCTATA 58.217 39.130 0.00 0.00 40.31 1.31
2979 3213 5.381757 TGAAAAACGCATTAGGCCCTATAT 58.618 37.500 0.00 0.00 40.31 0.86
2980 3214 6.535540 TGAAAAACGCATTAGGCCCTATATA 58.464 36.000 0.00 0.00 40.31 0.86
2981 3215 6.653320 TGAAAAACGCATTAGGCCCTATATAG 59.347 38.462 0.00 2.46 40.31 1.31
2982 3216 6.368779 AAAACGCATTAGGCCCTATATAGA 57.631 37.500 11.53 0.00 40.31 1.98
2983 3217 6.561519 AAACGCATTAGGCCCTATATAGAT 57.438 37.500 11.53 0.00 40.31 1.98
2984 3218 5.537300 ACGCATTAGGCCCTATATAGATG 57.463 43.478 11.53 6.87 40.31 2.90
2985 3219 4.345257 ACGCATTAGGCCCTATATAGATGG 59.655 45.833 11.53 6.04 40.31 3.51
2986 3220 4.588951 CGCATTAGGCCCTATATAGATGGA 59.411 45.833 11.53 0.00 40.31 3.41
2987 3221 5.070446 CGCATTAGGCCCTATATAGATGGAA 59.930 44.000 11.53 0.00 40.31 3.53
2988 3222 6.529220 GCATTAGGCCCTATATAGATGGAAG 58.471 44.000 11.53 0.00 36.11 3.46
2989 3223 6.465035 GCATTAGGCCCTATATAGATGGAAGG 60.465 46.154 11.53 3.94 36.11 3.46
2990 3224 4.994411 AGGCCCTATATAGATGGAAGGA 57.006 45.455 11.53 0.00 0.00 3.36
2991 3225 4.889780 AGGCCCTATATAGATGGAAGGAG 58.110 47.826 11.53 0.00 0.00 3.69
2992 3226 3.970640 GGCCCTATATAGATGGAAGGAGG 59.029 52.174 11.53 1.87 0.00 4.30
2993 3227 3.970640 GCCCTATATAGATGGAAGGAGGG 59.029 52.174 11.53 3.52 44.52 4.30
2994 3228 4.327010 GCCCTATATAGATGGAAGGAGGGA 60.327 50.000 11.53 0.00 44.48 4.20
2995 3229 5.463154 CCCTATATAGATGGAAGGAGGGAG 58.537 50.000 11.53 0.00 44.48 4.30
3015 3252 2.503356 AGTAGCTAGCTTGGTTGCTGAT 59.497 45.455 24.88 0.00 43.87 2.90
3025 3262 1.672363 TGGTTGCTGATCAATCGATGC 59.328 47.619 0.00 0.00 38.64 3.91
3030 3267 2.148768 GCTGATCAATCGATGCATGGA 58.851 47.619 14.13 14.13 29.66 3.41
3031 3268 2.747989 GCTGATCAATCGATGCATGGAT 59.252 45.455 17.52 17.52 29.66 3.41
3032 3269 3.937079 GCTGATCAATCGATGCATGGATA 59.063 43.478 22.53 10.19 29.66 2.59
3033 3270 4.575236 GCTGATCAATCGATGCATGGATAT 59.425 41.667 22.53 14.23 29.66 1.63
3034 3271 5.504173 GCTGATCAATCGATGCATGGATATG 60.504 44.000 22.53 20.21 32.68 1.78
3035 3272 5.736813 TGATCAATCGATGCATGGATATGA 58.263 37.500 22.53 23.59 31.78 2.15
3061 3298 1.238439 GGCATATGCGCAATACAGGT 58.762 50.000 17.11 0.00 43.26 4.00
3113 3350 4.699522 ACGGCGAAGGGGAAGCAC 62.700 66.667 16.62 0.00 0.00 4.40
3163 3400 1.227556 ACAAGGACGACACCAGCAC 60.228 57.895 0.00 0.00 0.00 4.40
3164 3401 2.029073 AAGGACGACACCAGCACG 59.971 61.111 0.00 0.00 0.00 5.34
3165 3402 2.495409 AAGGACGACACCAGCACGA 61.495 57.895 0.00 0.00 0.00 4.35
3166 3403 2.694829 AAGGACGACACCAGCACGAC 62.695 60.000 0.00 0.00 0.00 4.34
3167 3404 3.097728 GACGACACCAGCACGACG 61.098 66.667 0.00 0.00 0.00 5.12
3168 3405 4.640855 ACGACACCAGCACGACGG 62.641 66.667 0.00 0.00 0.00 4.79
3169 3406 4.640855 CGACACCAGCACGACGGT 62.641 66.667 0.00 0.00 35.27 4.83
3170 3407 2.279918 GACACCAGCACGACGGTT 60.280 61.111 0.00 0.00 31.41 4.44
3171 3408 1.885850 GACACCAGCACGACGGTTT 60.886 57.895 0.00 0.00 31.41 3.27
3172 3409 1.433837 GACACCAGCACGACGGTTTT 61.434 55.000 0.00 0.00 31.41 2.43
3173 3410 1.010125 CACCAGCACGACGGTTTTG 60.010 57.895 0.00 0.00 31.41 2.44
3174 3411 2.184167 ACCAGCACGACGGTTTTGG 61.184 57.895 0.00 4.18 34.66 3.28
3175 3412 2.184167 CCAGCACGACGGTTTTGGT 61.184 57.895 0.00 0.00 0.00 3.67
3176 3413 1.720694 CCAGCACGACGGTTTTGGTT 61.721 55.000 0.00 0.00 0.00 3.67
3177 3414 0.938713 CAGCACGACGGTTTTGGTTA 59.061 50.000 0.00 0.00 0.00 2.85
3178 3415 0.939419 AGCACGACGGTTTTGGTTAC 59.061 50.000 0.00 0.00 0.00 2.50
3179 3416 0.656785 GCACGACGGTTTTGGTTACA 59.343 50.000 0.00 0.00 0.00 2.41
3180 3417 1.333435 GCACGACGGTTTTGGTTACAG 60.333 52.381 0.00 0.00 0.00 2.74
3181 3418 2.203401 CACGACGGTTTTGGTTACAGA 58.797 47.619 0.00 0.00 0.00 3.41
3182 3419 2.803956 CACGACGGTTTTGGTTACAGAT 59.196 45.455 0.00 0.00 0.00 2.90
3183 3420 3.062042 ACGACGGTTTTGGTTACAGATC 58.938 45.455 0.00 0.00 0.00 2.75
3184 3421 2.091588 CGACGGTTTTGGTTACAGATCG 59.908 50.000 0.00 0.00 0.00 3.69
3185 3422 3.319755 GACGGTTTTGGTTACAGATCGA 58.680 45.455 0.00 0.00 0.00 3.59
3186 3423 3.930848 GACGGTTTTGGTTACAGATCGAT 59.069 43.478 0.00 0.00 0.00 3.59
3187 3424 3.930848 ACGGTTTTGGTTACAGATCGATC 59.069 43.478 17.91 17.91 0.00 3.69
3188 3425 3.930229 CGGTTTTGGTTACAGATCGATCA 59.070 43.478 26.47 3.90 0.00 2.92
3189 3426 4.201685 CGGTTTTGGTTACAGATCGATCAC 60.202 45.833 26.47 15.43 0.00 3.06
3190 3427 4.935808 GGTTTTGGTTACAGATCGATCACT 59.064 41.667 26.47 13.27 0.00 3.41
3191 3428 6.103997 GGTTTTGGTTACAGATCGATCACTA 58.896 40.000 26.47 11.38 0.00 2.74
3192 3429 6.592607 GGTTTTGGTTACAGATCGATCACTAA 59.407 38.462 26.47 16.30 0.00 2.24
3193 3430 7.118680 GGTTTTGGTTACAGATCGATCACTAAA 59.881 37.037 26.47 20.49 0.00 1.85
3194 3431 8.665685 GTTTTGGTTACAGATCGATCACTAAAT 58.334 33.333 26.47 2.33 0.00 1.40
3195 3432 8.786826 TTTGGTTACAGATCGATCACTAAATT 57.213 30.769 26.47 1.56 0.00 1.82
3196 3433 8.420374 TTGGTTACAGATCGATCACTAAATTC 57.580 34.615 26.47 13.21 0.00 2.17
3197 3434 6.695713 TGGTTACAGATCGATCACTAAATTCG 59.304 38.462 26.47 6.29 0.00 3.34
3198 3435 6.144080 GGTTACAGATCGATCACTAAATTCGG 59.856 42.308 26.47 1.95 33.82 4.30
3199 3436 5.263968 ACAGATCGATCACTAAATTCGGT 57.736 39.130 26.47 2.60 33.82 4.69
3200 3437 5.661458 ACAGATCGATCACTAAATTCGGTT 58.339 37.500 26.47 0.00 33.82 4.44
3201 3438 6.802608 ACAGATCGATCACTAAATTCGGTTA 58.197 36.000 26.47 0.00 33.82 2.85
3202 3439 6.696148 ACAGATCGATCACTAAATTCGGTTAC 59.304 38.462 26.47 0.00 33.82 2.50
3203 3440 6.918569 CAGATCGATCACTAAATTCGGTTACT 59.081 38.462 26.47 0.00 33.82 2.24
3204 3441 7.113684 CAGATCGATCACTAAATTCGGTTACTC 59.886 40.741 26.47 0.00 33.82 2.59
3205 3442 6.198650 TCGATCACTAAATTCGGTTACTCA 57.801 37.500 0.00 0.00 33.82 3.41
3206 3443 6.032094 TCGATCACTAAATTCGGTTACTCAC 58.968 40.000 0.00 0.00 33.82 3.51
3207 3444 5.052567 CGATCACTAAATTCGGTTACTCACG 60.053 44.000 0.00 0.00 0.00 4.35
3208 3445 4.487948 TCACTAAATTCGGTTACTCACGG 58.512 43.478 0.00 0.00 0.00 4.94
3209 3446 3.615496 CACTAAATTCGGTTACTCACGGG 59.385 47.826 0.00 0.00 0.00 5.28
3210 3447 2.845363 AAATTCGGTTACTCACGGGT 57.155 45.000 0.00 0.00 0.00 5.28
3211 3448 3.959535 AAATTCGGTTACTCACGGGTA 57.040 42.857 0.00 0.00 0.00 3.69
3212 3449 3.959535 AATTCGGTTACTCACGGGTAA 57.040 42.857 0.00 0.00 0.00 2.85
3213 3450 2.723124 TTCGGTTACTCACGGGTAAC 57.277 50.000 10.86 10.86 46.16 2.50
3227 3464 1.730501 GGTAACCGTGTTTCCCTAGC 58.269 55.000 2.41 0.00 0.00 3.42
3228 3465 1.676916 GGTAACCGTGTTTCCCTAGCC 60.677 57.143 2.41 0.00 0.00 3.93
3229 3466 0.614812 TAACCGTGTTTCCCTAGCCC 59.385 55.000 0.00 0.00 0.00 5.19
3230 3467 2.133359 AACCGTGTTTCCCTAGCCCC 62.133 60.000 0.00 0.00 0.00 5.80
3231 3468 2.598787 CCGTGTTTCCCTAGCCCCA 61.599 63.158 0.00 0.00 0.00 4.96
3232 3469 1.607612 CGTGTTTCCCTAGCCCCAT 59.392 57.895 0.00 0.00 0.00 4.00
3233 3470 0.463833 CGTGTTTCCCTAGCCCCATC 60.464 60.000 0.00 0.00 0.00 3.51
3234 3471 0.463833 GTGTTTCCCTAGCCCCATCG 60.464 60.000 0.00 0.00 0.00 3.84
3235 3472 1.148498 GTTTCCCTAGCCCCATCGG 59.852 63.158 0.00 0.00 0.00 4.18
3236 3473 1.003704 TTTCCCTAGCCCCATCGGA 59.996 57.895 0.00 0.00 0.00 4.55
3237 3474 0.622154 TTTCCCTAGCCCCATCGGAA 60.622 55.000 0.00 0.00 0.00 4.30
3238 3475 0.622154 TTCCCTAGCCCCATCGGAAA 60.622 55.000 0.00 0.00 29.74 3.13
3239 3476 0.622154 TCCCTAGCCCCATCGGAAAA 60.622 55.000 0.00 0.00 0.00 2.29
3240 3477 0.478507 CCCTAGCCCCATCGGAAAAT 59.521 55.000 0.00 0.00 0.00 1.82
3241 3478 1.702957 CCCTAGCCCCATCGGAAAATA 59.297 52.381 0.00 0.00 0.00 1.40
3242 3479 2.290323 CCCTAGCCCCATCGGAAAATAG 60.290 54.545 0.00 0.00 0.00 1.73
3243 3480 2.637872 CCTAGCCCCATCGGAAAATAGA 59.362 50.000 0.00 0.00 0.00 1.98
3244 3481 3.072476 CCTAGCCCCATCGGAAAATAGAA 59.928 47.826 0.00 0.00 0.00 2.10
3245 3482 3.884037 AGCCCCATCGGAAAATAGAAT 57.116 42.857 0.00 0.00 0.00 2.40
3246 3483 4.184649 AGCCCCATCGGAAAATAGAATT 57.815 40.909 0.00 0.00 0.00 2.17
3247 3484 5.319043 AGCCCCATCGGAAAATAGAATTA 57.681 39.130 0.00 0.00 0.00 1.40
3248 3485 5.316987 AGCCCCATCGGAAAATAGAATTAG 58.683 41.667 0.00 0.00 0.00 1.73
3249 3486 4.082733 GCCCCATCGGAAAATAGAATTAGC 60.083 45.833 0.00 0.00 0.00 3.09
3250 3487 5.070001 CCCCATCGGAAAATAGAATTAGCA 58.930 41.667 0.00 0.00 0.00 3.49
3251 3488 5.534654 CCCCATCGGAAAATAGAATTAGCAA 59.465 40.000 0.00 0.00 0.00 3.91
3252 3489 6.040391 CCCCATCGGAAAATAGAATTAGCAAA 59.960 38.462 0.00 0.00 0.00 3.68
3253 3490 7.255942 CCCCATCGGAAAATAGAATTAGCAAAT 60.256 37.037 0.00 0.00 0.00 2.32
3254 3491 7.809806 CCCATCGGAAAATAGAATTAGCAAATC 59.190 37.037 0.00 0.00 0.00 2.17
3255 3492 7.809806 CCATCGGAAAATAGAATTAGCAAATCC 59.190 37.037 0.00 0.00 0.00 3.01
3256 3493 6.954944 TCGGAAAATAGAATTAGCAAATCCG 58.045 36.000 11.02 11.02 45.43 4.18
3257 3494 6.540914 TCGGAAAATAGAATTAGCAAATCCGT 59.459 34.615 14.79 0.00 44.63 4.69
3258 3495 6.851330 CGGAAAATAGAATTAGCAAATCCGTC 59.149 38.462 0.00 0.00 40.73 4.79
3259 3496 6.851330 GGAAAATAGAATTAGCAAATCCGTCG 59.149 38.462 0.00 0.00 0.00 5.12
3260 3497 7.254658 GGAAAATAGAATTAGCAAATCCGTCGA 60.255 37.037 0.00 0.00 0.00 4.20
3261 3498 7.548196 AAATAGAATTAGCAAATCCGTCGAA 57.452 32.000 0.00 0.00 0.00 3.71
3262 3499 7.730364 AATAGAATTAGCAAATCCGTCGAAT 57.270 32.000 0.00 0.00 0.00 3.34
3263 3500 7.730364 ATAGAATTAGCAAATCCGTCGAATT 57.270 32.000 0.00 0.00 0.00 2.17
3264 3501 8.827177 ATAGAATTAGCAAATCCGTCGAATTA 57.173 30.769 0.00 0.00 0.00 1.40
3265 3502 7.730364 AGAATTAGCAAATCCGTCGAATTAT 57.270 32.000 0.00 0.00 0.00 1.28
3266 3503 8.154649 AGAATTAGCAAATCCGTCGAATTATT 57.845 30.769 0.00 0.00 0.00 1.40
3267 3504 8.070171 AGAATTAGCAAATCCGTCGAATTATTG 58.930 33.333 0.00 0.00 0.00 1.90
3268 3505 3.952535 AGCAAATCCGTCGAATTATTGC 58.047 40.909 13.24 13.24 41.34 3.56
3269 3506 3.376859 AGCAAATCCGTCGAATTATTGCA 59.623 39.130 19.59 0.00 42.95 4.08
3270 3507 3.482110 GCAAATCCGTCGAATTATTGCAC 59.518 43.478 15.18 0.00 40.86 4.57
3271 3508 3.585748 AATCCGTCGAATTATTGCACG 57.414 42.857 0.00 0.00 0.00 5.34
3272 3509 2.281140 TCCGTCGAATTATTGCACGA 57.719 45.000 6.78 0.00 32.08 4.35
3273 3510 2.608268 TCCGTCGAATTATTGCACGAA 58.392 42.857 6.78 0.00 36.57 3.85
3274 3511 2.994578 TCCGTCGAATTATTGCACGAAA 59.005 40.909 6.78 0.00 36.57 3.46
3275 3512 3.432592 TCCGTCGAATTATTGCACGAAAA 59.567 39.130 6.78 0.00 36.57 2.29
3276 3513 4.083961 TCCGTCGAATTATTGCACGAAAAA 60.084 37.500 6.78 0.00 36.57 1.94
3277 3514 4.791163 CCGTCGAATTATTGCACGAAAAAT 59.209 37.500 6.78 0.00 36.57 1.82
3278 3515 5.053286 CCGTCGAATTATTGCACGAAAAATC 60.053 40.000 6.78 0.00 36.57 2.17
3279 3516 5.732647 CGTCGAATTATTGCACGAAAAATCT 59.267 36.000 0.00 0.00 36.57 2.40
3280 3517 6.076607 CGTCGAATTATTGCACGAAAAATCTC 60.077 38.462 0.00 0.00 36.57 2.75
3281 3518 6.740905 GTCGAATTATTGCACGAAAAATCTCA 59.259 34.615 0.00 0.00 36.57 3.27
3282 3519 6.960992 TCGAATTATTGCACGAAAAATCTCAG 59.039 34.615 0.00 0.00 0.00 3.35
3283 3520 6.960992 CGAATTATTGCACGAAAAATCTCAGA 59.039 34.615 0.00 0.00 0.00 3.27
3284 3521 7.641411 CGAATTATTGCACGAAAAATCTCAGAT 59.359 33.333 0.00 0.00 0.00 2.90
3285 3522 8.624701 AATTATTGCACGAAAAATCTCAGATG 57.375 30.769 0.00 0.00 0.00 2.90
3286 3523 5.885230 ATTGCACGAAAAATCTCAGATGA 57.115 34.783 0.00 0.00 0.00 2.92
3287 3524 5.885230 TTGCACGAAAAATCTCAGATGAT 57.115 34.783 0.00 0.00 0.00 2.45
3288 3525 5.885230 TGCACGAAAAATCTCAGATGATT 57.115 34.783 0.00 0.00 38.19 2.57
3289 3526 5.872635 TGCACGAAAAATCTCAGATGATTC 58.127 37.500 0.00 0.00 35.82 2.52
3290 3527 5.163723 TGCACGAAAAATCTCAGATGATTCC 60.164 40.000 6.97 0.00 35.82 3.01
3291 3528 5.163723 GCACGAAAAATCTCAGATGATTCCA 60.164 40.000 6.97 0.00 35.82 3.53
3292 3529 6.623549 GCACGAAAAATCTCAGATGATTCCAA 60.624 38.462 6.97 0.00 35.82 3.53
3293 3530 7.307694 CACGAAAAATCTCAGATGATTCCAAA 58.692 34.615 6.97 0.00 35.82 3.28
3294 3531 7.972277 CACGAAAAATCTCAGATGATTCCAAAT 59.028 33.333 6.97 0.00 35.82 2.32
3295 3532 9.177608 ACGAAAAATCTCAGATGATTCCAAATA 57.822 29.630 6.97 0.00 35.82 1.40
3296 3533 9.661187 CGAAAAATCTCAGATGATTCCAAATAG 57.339 33.333 6.97 0.00 35.82 1.73
3300 3537 9.917887 AAATCTCAGATGATTCCAAATAGAAGT 57.082 29.630 0.00 0.00 35.82 3.01
3301 3538 9.917887 AATCTCAGATGATTCCAAATAGAAGTT 57.082 29.630 0.00 0.00 31.72 2.66
3302 3539 9.917887 ATCTCAGATGATTCCAAATAGAAGTTT 57.082 29.630 0.00 0.00 0.00 2.66
3303 3540 9.170734 TCTCAGATGATTCCAAATAGAAGTTTG 57.829 33.333 0.00 0.00 38.50 2.93
3304 3541 9.170734 CTCAGATGATTCCAAATAGAAGTTTGA 57.829 33.333 1.24 0.00 40.64 2.69
3305 3542 9.170734 TCAGATGATTCCAAATAGAAGTTTGAG 57.829 33.333 1.24 0.00 40.64 3.02
3306 3543 8.954350 CAGATGATTCCAAATAGAAGTTTGAGT 58.046 33.333 1.24 0.00 40.64 3.41
3309 3546 9.739276 ATGATTCCAAATAGAAGTTTGAGTACA 57.261 29.630 0.00 0.00 40.64 2.90
3310 3547 9.567776 TGATTCCAAATAGAAGTTTGAGTACAA 57.432 29.630 0.00 0.00 40.64 2.41
3323 3560 8.587952 AGTTTGAGTACAAATTTGTAAATGGC 57.412 30.769 28.05 17.19 45.71 4.40
3324 3561 8.421002 AGTTTGAGTACAAATTTGTAAATGGCT 58.579 29.630 28.05 20.91 45.71 4.75
3325 3562 8.487176 GTTTGAGTACAAATTTGTAAATGGCTG 58.513 33.333 28.05 0.00 45.71 4.85
3326 3563 7.283625 TGAGTACAAATTTGTAAATGGCTGT 57.716 32.000 28.05 5.10 44.46 4.40
3327 3564 7.721402 TGAGTACAAATTTGTAAATGGCTGTT 58.279 30.769 28.05 9.06 44.46 3.16
3328 3565 8.851145 TGAGTACAAATTTGTAAATGGCTGTTA 58.149 29.630 28.05 5.39 44.46 2.41
3329 3566 9.685828 GAGTACAAATTTGTAAATGGCTGTTAA 57.314 29.630 28.05 5.20 44.46 2.01
3330 3567 9.691362 AGTACAAATTTGTAAATGGCTGTTAAG 57.309 29.630 28.05 0.00 44.46 1.85
3331 3568 7.961325 ACAAATTTGTAAATGGCTGTTAAGG 57.039 32.000 22.10 0.00 40.16 2.69
3332 3569 6.426633 ACAAATTTGTAAATGGCTGTTAAGGC 59.573 34.615 22.10 0.00 43.68 4.35
3333 3570 7.689066 ACAAATTTGTAAATGGCTGTTAAGGCT 60.689 33.333 22.10 0.00 43.73 4.58
3342 3579 4.674281 GGCTGTTAAGGCTACTCATAGT 57.326 45.455 0.00 0.00 45.41 2.12
3343 3580 4.372656 GGCTGTTAAGGCTACTCATAGTG 58.627 47.826 0.00 0.00 45.41 2.74
3344 3581 4.372656 GCTGTTAAGGCTACTCATAGTGG 58.627 47.826 0.00 0.00 0.00 4.00
3345 3582 4.740934 GCTGTTAAGGCTACTCATAGTGGG 60.741 50.000 0.00 0.00 0.00 4.61
3346 3583 3.709653 TGTTAAGGCTACTCATAGTGGGG 59.290 47.826 0.00 0.00 0.00 4.96
3347 3584 2.868964 AAGGCTACTCATAGTGGGGA 57.131 50.000 0.00 0.00 0.00 4.81
3348 3585 2.390225 AGGCTACTCATAGTGGGGAG 57.610 55.000 0.00 0.00 37.18 4.30
3349 3586 1.576272 AGGCTACTCATAGTGGGGAGT 59.424 52.381 0.00 0.00 45.72 3.85
3350 3587 1.689273 GGCTACTCATAGTGGGGAGTG 59.311 57.143 4.66 0.00 43.78 3.51
3351 3588 2.389715 GCTACTCATAGTGGGGAGTGT 58.610 52.381 4.66 0.00 43.78 3.55
3352 3589 2.362717 GCTACTCATAGTGGGGAGTGTC 59.637 54.545 4.66 0.00 43.78 3.67
3353 3590 2.623418 ACTCATAGTGGGGAGTGTCA 57.377 50.000 0.00 0.00 42.49 3.58
3354 3591 3.121929 ACTCATAGTGGGGAGTGTCAT 57.878 47.619 0.00 0.00 42.49 3.06
3355 3592 4.265856 ACTCATAGTGGGGAGTGTCATA 57.734 45.455 0.00 0.00 42.49 2.15
3356 3593 4.820775 ACTCATAGTGGGGAGTGTCATAT 58.179 43.478 0.00 0.00 42.49 1.78
3357 3594 5.965486 ACTCATAGTGGGGAGTGTCATATA 58.035 41.667 0.00 0.00 42.49 0.86
3358 3595 5.775701 ACTCATAGTGGGGAGTGTCATATAC 59.224 44.000 0.00 0.00 42.49 1.47
3359 3596 5.965486 TCATAGTGGGGAGTGTCATATACT 58.035 41.667 0.00 0.00 0.00 2.12
3360 3597 7.098845 TCATAGTGGGGAGTGTCATATACTA 57.901 40.000 0.00 0.00 0.00 1.82
3361 3598 7.532199 TCATAGTGGGGAGTGTCATATACTAA 58.468 38.462 0.00 0.00 0.00 2.24
3362 3599 8.177456 TCATAGTGGGGAGTGTCATATACTAAT 58.823 37.037 0.00 0.00 0.00 1.73
3363 3600 9.475620 CATAGTGGGGAGTGTCATATACTAATA 57.524 37.037 0.00 0.00 0.00 0.98
3365 3602 8.596781 AGTGGGGAGTGTCATATACTAATATC 57.403 38.462 0.00 0.00 0.00 1.63
3366 3603 8.177456 AGTGGGGAGTGTCATATACTAATATCA 58.823 37.037 0.00 0.00 0.00 2.15
3367 3604 8.982723 GTGGGGAGTGTCATATACTAATATCAT 58.017 37.037 0.00 0.00 0.00 2.45
3368 3605 8.981659 TGGGGAGTGTCATATACTAATATCATG 58.018 37.037 0.00 0.00 0.00 3.07
3369 3606 7.928706 GGGGAGTGTCATATACTAATATCATGC 59.071 40.741 0.00 0.00 0.00 4.06
3370 3607 8.478066 GGGAGTGTCATATACTAATATCATGCA 58.522 37.037 0.00 0.00 0.00 3.96
3406 3643 8.825774 AGTGTATGATATTACCTCCATAATGCA 58.174 33.333 0.00 0.00 0.00 3.96
3407 3644 9.618890 GTGTATGATATTACCTCCATAATGCAT 57.381 33.333 0.00 0.00 31.48 3.96
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
119 120 2.954868 GGTATCGAGCCACGCGTG 60.955 66.667 31.77 31.77 42.26 5.34
139 140 0.109086 CATTCTCGCTGGTGTCGTCT 60.109 55.000 0.00 0.00 0.00 4.18
172 173 2.416972 CGGTGCAACTAGAACCTACTCC 60.417 54.545 0.00 0.00 44.73 3.85
351 352 1.396996 CGGCCACTGTAAACATACTGC 59.603 52.381 2.24 0.00 0.00 4.40
354 355 1.396996 CAGCGGCCACTGTAAACATAC 59.603 52.381 12.88 0.00 32.78 2.39
431 432 3.707700 CAACGCGCGGCACACTAA 61.708 61.111 35.22 0.00 0.00 2.24
453 454 6.627395 TGCTCTTAGACTATCTCTAACAGC 57.373 41.667 9.28 9.28 46.31 4.40
466 467 4.727507 TCTGTTGGAGATGCTCTTAGAC 57.272 45.455 0.00 0.00 0.00 2.59
501 502 4.808558 AGTAGTTTTTATACCGTGCGTCA 58.191 39.130 0.00 0.00 0.00 4.35
554 555 1.662446 CTTTTTGTGCGGCTGCTGG 60.662 57.895 20.27 0.00 43.34 4.85
574 575 2.659291 GCATTAGTTATAGCGCGCACAC 60.659 50.000 35.10 22.21 0.00 3.82
622 623 1.062873 TGTCTTTTTAATGCGCGCGC 61.063 50.000 45.02 45.02 42.35 6.86
647 648 1.939934 GGACGCACTAAATATGCTGCA 59.060 47.619 4.13 4.13 41.10 4.41
697 698 2.930385 ATCAAGCGGTCCCATCTGCG 62.930 60.000 0.00 0.00 43.62 5.18
747 748 1.658968 CTTCAACACGCGCTGTAAAC 58.341 50.000 5.73 0.00 30.51 2.01
764 765 4.853007 AGGATGCTAGAAGACATTTGCTT 58.147 39.130 0.00 0.00 0.00 3.91
771 772 6.374417 AGGTTTTTAGGATGCTAGAAGACA 57.626 37.500 0.00 0.00 0.00 3.41
782 783 4.901868 TCGTGCAAGTAGGTTTTTAGGAT 58.098 39.130 0.00 0.00 0.00 3.24
836 837 1.719600 GAGCATCTTCAACAGTCGCT 58.280 50.000 0.00 0.00 34.85 4.93
1610 1614 2.526873 AGACGCCAGGGAGGTTGT 60.527 61.111 0.00 0.00 40.61 3.32
1998 2185 1.089920 CAATCACCGCCTTCTCCTTG 58.910 55.000 0.00 0.00 0.00 3.61
2236 2423 4.980805 GGCGCTGTCACCGGTGAA 62.981 66.667 37.75 24.97 41.85 3.18
2394 2628 1.281899 GTACTGCATCTGGAACTCGC 58.718 55.000 0.00 0.00 0.00 5.03
2589 2823 1.451927 TGGATCGCCACCTCAATGC 60.452 57.895 0.00 0.00 39.92 3.56
2681 2915 4.680237 CTTGGCGGTCCAGCACGA 62.680 66.667 7.78 0.00 44.53 4.35
2713 2947 2.177531 CTGCTGCCATGCACGAAC 59.822 61.111 0.00 0.00 38.12 3.95
2739 2973 4.156556 GGAGTAGTTTTCTCATGCAATGCA 59.843 41.667 11.44 11.44 46.21 3.96
2740 2974 4.439289 GGGAGTAGTTTTCTCATGCAATGC 60.439 45.833 0.00 0.00 46.21 3.56
2742 2976 5.184892 AGGGAGTAGTTTTCTCATGCAAT 57.815 39.130 0.00 0.00 34.04 3.56
2743 2977 4.565652 GGAGGGAGTAGTTTTCTCATGCAA 60.566 45.833 0.00 0.00 34.04 4.08
2744 2978 3.055094 GGAGGGAGTAGTTTTCTCATGCA 60.055 47.826 0.00 0.00 34.04 3.96
2745 2979 3.198853 AGGAGGGAGTAGTTTTCTCATGC 59.801 47.826 0.00 0.00 34.04 4.06
2746 2980 5.423886 GAAGGAGGGAGTAGTTTTCTCATG 58.576 45.833 0.00 0.00 34.04 3.07
2747 2981 4.471747 GGAAGGAGGGAGTAGTTTTCTCAT 59.528 45.833 0.00 0.00 34.04 2.90
2748 2982 3.838903 GGAAGGAGGGAGTAGTTTTCTCA 59.161 47.826 0.00 0.00 34.04 3.27
2749 2983 3.838903 TGGAAGGAGGGAGTAGTTTTCTC 59.161 47.826 0.00 0.00 0.00 2.87
2750 2984 3.870559 TGGAAGGAGGGAGTAGTTTTCT 58.129 45.455 0.00 0.00 0.00 2.52
2751 2985 4.471747 AGATGGAAGGAGGGAGTAGTTTTC 59.528 45.833 0.00 0.00 0.00 2.29
2752 2986 4.439860 AGATGGAAGGAGGGAGTAGTTTT 58.560 43.478 0.00 0.00 0.00 2.43
2753 2987 4.081695 AGATGGAAGGAGGGAGTAGTTT 57.918 45.455 0.00 0.00 0.00 2.66
2754 2988 3.786213 AGATGGAAGGAGGGAGTAGTT 57.214 47.619 0.00 0.00 0.00 2.24
2755 2989 6.744802 ATATAGATGGAAGGAGGGAGTAGT 57.255 41.667 0.00 0.00 0.00 2.73
2756 2990 7.294584 CCTATATAGATGGAAGGAGGGAGTAG 58.705 46.154 11.53 0.00 0.00 2.57
2757 2991 6.162420 CCCTATATAGATGGAAGGAGGGAGTA 59.838 46.154 11.53 0.00 44.48 2.59
2758 2992 5.042979 CCCTATATAGATGGAAGGAGGGAGT 60.043 48.000 11.53 0.00 44.48 3.85
2759 2993 5.463154 CCCTATATAGATGGAAGGAGGGAG 58.537 50.000 11.53 0.00 44.48 4.30
2760 2994 4.327010 GCCCTATATAGATGGAAGGAGGGA 60.327 50.000 11.53 0.00 44.48 4.20
2761 2995 3.970640 GCCCTATATAGATGGAAGGAGGG 59.029 52.174 11.53 3.52 44.52 4.30
2762 2996 3.970640 GGCCCTATATAGATGGAAGGAGG 59.029 52.174 11.53 1.87 0.00 4.30
2763 2997 4.889780 AGGCCCTATATAGATGGAAGGAG 58.110 47.826 11.53 0.00 0.00 3.69
2764 2998 4.994411 AGGCCCTATATAGATGGAAGGA 57.006 45.455 11.53 0.00 0.00 3.36
2765 2999 6.465035 GCATTAGGCCCTATATAGATGGAAGG 60.465 46.154 11.53 3.94 36.11 3.46
2766 3000 6.529220 GCATTAGGCCCTATATAGATGGAAG 58.471 44.000 11.53 0.00 36.11 3.46
2767 3001 5.070446 CGCATTAGGCCCTATATAGATGGAA 59.930 44.000 11.53 0.00 40.31 3.53
2768 3002 4.588951 CGCATTAGGCCCTATATAGATGGA 59.411 45.833 11.53 0.00 40.31 3.41
2769 3003 4.345257 ACGCATTAGGCCCTATATAGATGG 59.655 45.833 11.53 6.04 40.31 3.51
2770 3004 5.537300 ACGCATTAGGCCCTATATAGATG 57.463 43.478 11.53 6.87 40.31 2.90
2771 3005 6.561519 AAACGCATTAGGCCCTATATAGAT 57.438 37.500 11.53 0.00 40.31 1.98
2772 3006 6.368779 AAAACGCATTAGGCCCTATATAGA 57.631 37.500 11.53 0.00 40.31 1.98
2773 3007 6.653320 TGAAAAACGCATTAGGCCCTATATAG 59.347 38.462 0.00 2.46 40.31 1.31
2774 3008 6.535540 TGAAAAACGCATTAGGCCCTATATA 58.464 36.000 0.00 0.00 40.31 0.86
2775 3009 5.381757 TGAAAAACGCATTAGGCCCTATAT 58.618 37.500 0.00 0.00 40.31 0.86
2776 3010 4.783055 TGAAAAACGCATTAGGCCCTATA 58.217 39.130 0.00 0.00 40.31 1.31
2777 3011 3.626930 TGAAAAACGCATTAGGCCCTAT 58.373 40.909 0.00 0.00 40.31 2.57
2778 3012 3.074675 TGAAAAACGCATTAGGCCCTA 57.925 42.857 0.00 0.00 40.31 3.53
2779 3013 1.917872 TGAAAAACGCATTAGGCCCT 58.082 45.000 0.00 0.00 40.31 5.19
2780 3014 2.230266 TCTTGAAAAACGCATTAGGCCC 59.770 45.455 0.00 0.00 40.31 5.80
2781 3015 3.242518 GTCTTGAAAAACGCATTAGGCC 58.757 45.455 0.00 0.00 40.31 5.19
2782 3016 3.242518 GGTCTTGAAAAACGCATTAGGC 58.757 45.455 0.00 0.00 39.90 3.93
2783 3017 3.488489 CGGTCTTGAAAAACGCATTAGG 58.512 45.455 0.00 0.00 0.00 2.69
2790 3024 2.116366 CAAAGGCGGTCTTGAAAAACG 58.884 47.619 0.00 0.00 35.55 3.60
2791 3025 3.113322 GTCAAAGGCGGTCTTGAAAAAC 58.887 45.455 0.00 0.00 35.55 2.43
2792 3026 3.020984 AGTCAAAGGCGGTCTTGAAAAA 58.979 40.909 0.00 0.00 35.55 1.94
2793 3027 2.650322 AGTCAAAGGCGGTCTTGAAAA 58.350 42.857 0.00 0.00 35.55 2.29
2794 3028 2.341846 AGTCAAAGGCGGTCTTGAAA 57.658 45.000 0.00 0.00 35.55 2.69
2795 3029 3.695830 ATAGTCAAAGGCGGTCTTGAA 57.304 42.857 0.00 0.00 35.55 2.69
2796 3030 3.007506 TCAATAGTCAAAGGCGGTCTTGA 59.992 43.478 0.00 0.00 35.55 3.02
2797 3031 3.125316 GTCAATAGTCAAAGGCGGTCTTG 59.875 47.826 0.00 0.00 35.55 3.02
2798 3032 3.244422 TGTCAATAGTCAAAGGCGGTCTT 60.244 43.478 0.00 0.00 37.28 3.01
2799 3033 2.301870 TGTCAATAGTCAAAGGCGGTCT 59.698 45.455 0.00 0.00 0.00 3.85
2800 3034 2.695359 TGTCAATAGTCAAAGGCGGTC 58.305 47.619 0.00 0.00 0.00 4.79
2801 3035 2.851263 TGTCAATAGTCAAAGGCGGT 57.149 45.000 0.00 0.00 0.00 5.68
2802 3036 4.497473 TTTTGTCAATAGTCAAAGGCGG 57.503 40.909 0.00 0.00 34.98 6.13
2803 3037 8.687824 ATTAATTTTGTCAATAGTCAAAGGCG 57.312 30.769 0.00 0.00 34.98 5.52
2878 3112 8.077386 ACAAAACATACCGTCAAATTCGTATTT 58.923 29.630 0.00 0.00 34.29 1.40
2879 3113 7.535940 CACAAAACATACCGTCAAATTCGTATT 59.464 33.333 0.00 0.00 0.00 1.89
2880 3114 7.018826 CACAAAACATACCGTCAAATTCGTAT 58.981 34.615 0.00 0.00 0.00 3.06
2881 3115 6.018098 ACACAAAACATACCGTCAAATTCGTA 60.018 34.615 0.00 0.00 0.00 3.43
2882 3116 5.209240 CACAAAACATACCGTCAAATTCGT 58.791 37.500 0.00 0.00 0.00 3.85
2883 3117 5.209240 ACACAAAACATACCGTCAAATTCG 58.791 37.500 0.00 0.00 0.00 3.34
2884 3118 7.858879 ACTTACACAAAACATACCGTCAAATTC 59.141 33.333 0.00 0.00 0.00 2.17
2885 3119 7.708998 ACTTACACAAAACATACCGTCAAATT 58.291 30.769 0.00 0.00 0.00 1.82
2886 3120 7.266922 ACTTACACAAAACATACCGTCAAAT 57.733 32.000 0.00 0.00 0.00 2.32
2887 3121 6.680874 ACTTACACAAAACATACCGTCAAA 57.319 33.333 0.00 0.00 0.00 2.69
2888 3122 6.487960 CAACTTACACAAAACATACCGTCAA 58.512 36.000 0.00 0.00 0.00 3.18
2889 3123 5.504337 GCAACTTACACAAAACATACCGTCA 60.504 40.000 0.00 0.00 0.00 4.35
2890 3124 4.907582 GCAACTTACACAAAACATACCGTC 59.092 41.667 0.00 0.00 0.00 4.79
2891 3125 4.335874 TGCAACTTACACAAAACATACCGT 59.664 37.500 0.00 0.00 0.00 4.83
2892 3126 4.849883 TGCAACTTACACAAAACATACCG 58.150 39.130 0.00 0.00 0.00 4.02
2893 3127 6.212955 ACATGCAACTTACACAAAACATACC 58.787 36.000 0.00 0.00 0.00 2.73
2894 3128 6.915300 TGACATGCAACTTACACAAAACATAC 59.085 34.615 0.00 0.00 0.00 2.39
2895 3129 7.032377 TGACATGCAACTTACACAAAACATA 57.968 32.000 0.00 0.00 0.00 2.29
2896 3130 5.900425 TGACATGCAACTTACACAAAACAT 58.100 33.333 0.00 0.00 0.00 2.71
2897 3131 5.316327 TGACATGCAACTTACACAAAACA 57.684 34.783 0.00 0.00 0.00 2.83
2898 3132 9.061610 GTATATGACATGCAACTTACACAAAAC 57.938 33.333 0.00 0.00 0.00 2.43
2899 3133 9.008965 AGTATATGACATGCAACTTACACAAAA 57.991 29.630 0.00 0.00 0.00 2.44
2900 3134 8.560355 AGTATATGACATGCAACTTACACAAA 57.440 30.769 0.00 0.00 0.00 2.83
2901 3135 9.830975 ATAGTATATGACATGCAACTTACACAA 57.169 29.630 0.00 0.00 0.00 3.33
2902 3136 9.830975 AATAGTATATGACATGCAACTTACACA 57.169 29.630 0.00 0.00 0.00 3.72
2904 3138 9.830975 ACAATAGTATATGACATGCAACTTACA 57.169 29.630 0.00 0.00 0.00 2.41
2907 3141 9.618890 AGAACAATAGTATATGACATGCAACTT 57.381 29.630 0.00 0.00 0.00 2.66
2915 3149 9.908152 CGGATGTTAGAACAATAGTATATGACA 57.092 33.333 0.00 0.00 43.03 3.58
2916 3150 9.355215 CCGGATGTTAGAACAATAGTATATGAC 57.645 37.037 0.00 0.00 43.03 3.06
2917 3151 9.085645 ACCGGATGTTAGAACAATAGTATATGA 57.914 33.333 9.46 0.00 43.03 2.15
2918 3152 9.355215 GACCGGATGTTAGAACAATAGTATATG 57.645 37.037 9.46 0.00 43.03 1.78
2919 3153 9.085645 TGACCGGATGTTAGAACAATAGTATAT 57.914 33.333 9.46 0.00 43.03 0.86
2920 3154 8.467963 TGACCGGATGTTAGAACAATAGTATA 57.532 34.615 9.46 0.00 43.03 1.47
2921 3155 7.356089 TGACCGGATGTTAGAACAATAGTAT 57.644 36.000 9.46 0.00 43.03 2.12
2922 3156 6.778834 TGACCGGATGTTAGAACAATAGTA 57.221 37.500 9.46 0.00 43.03 1.82
2923 3157 5.670792 TGACCGGATGTTAGAACAATAGT 57.329 39.130 9.46 0.00 43.03 2.12
2924 3158 6.594159 ACTTTGACCGGATGTTAGAACAATAG 59.406 38.462 9.46 4.04 43.03 1.73
2925 3159 6.469410 ACTTTGACCGGATGTTAGAACAATA 58.531 36.000 9.46 0.00 43.03 1.90
2926 3160 5.313712 ACTTTGACCGGATGTTAGAACAAT 58.686 37.500 9.46 0.00 43.03 2.71
2927 3161 4.710324 ACTTTGACCGGATGTTAGAACAA 58.290 39.130 9.46 0.00 43.03 2.83
2928 3162 4.345859 ACTTTGACCGGATGTTAGAACA 57.654 40.909 9.46 0.00 44.06 3.18
2929 3163 5.163884 GCTAACTTTGACCGGATGTTAGAAC 60.164 44.000 25.01 13.82 41.21 3.01
2930 3164 4.933400 GCTAACTTTGACCGGATGTTAGAA 59.067 41.667 25.01 7.52 41.21 2.10
2931 3165 4.020928 TGCTAACTTTGACCGGATGTTAGA 60.021 41.667 25.01 15.13 41.21 2.10
2932 3166 4.250464 TGCTAACTTTGACCGGATGTTAG 58.750 43.478 9.46 17.76 41.46 2.34
2933 3167 4.274602 TGCTAACTTTGACCGGATGTTA 57.725 40.909 9.46 8.66 0.00 2.41
2934 3168 3.134574 TGCTAACTTTGACCGGATGTT 57.865 42.857 9.46 7.93 0.00 2.71
2935 3169 2.851263 TGCTAACTTTGACCGGATGT 57.149 45.000 9.46 0.00 0.00 3.06
2936 3170 3.689161 TCAATGCTAACTTTGACCGGATG 59.311 43.478 9.46 0.00 35.63 3.51
2937 3171 3.950397 TCAATGCTAACTTTGACCGGAT 58.050 40.909 9.46 0.00 35.63 4.18
2938 3172 3.410631 TCAATGCTAACTTTGACCGGA 57.589 42.857 9.46 0.00 35.63 5.14
2939 3173 4.497473 TTTCAATGCTAACTTTGACCGG 57.503 40.909 0.00 0.00 39.06 5.28
2940 3174 5.108405 CGTTTTTCAATGCTAACTTTGACCG 60.108 40.000 0.00 0.00 39.06 4.79
2941 3175 5.332280 GCGTTTTTCAATGCTAACTTTGACC 60.332 40.000 0.00 0.00 41.18 4.02
2942 3176 5.231147 TGCGTTTTTCAATGCTAACTTTGAC 59.769 36.000 1.15 0.00 44.27 3.18
2943 3177 5.344066 TGCGTTTTTCAATGCTAACTTTGA 58.656 33.333 1.15 0.00 44.27 2.69
2944 3178 5.633996 TGCGTTTTTCAATGCTAACTTTG 57.366 34.783 1.15 0.00 44.27 2.77
2945 3179 6.843069 AATGCGTTTTTCAATGCTAACTTT 57.157 29.167 1.15 0.00 44.27 2.66
2946 3180 6.586082 CCTAATGCGTTTTTCAATGCTAACTT 59.414 34.615 0.00 0.00 44.27 2.66
2947 3181 6.092748 CCTAATGCGTTTTTCAATGCTAACT 58.907 36.000 0.00 0.00 44.27 2.24
2948 3182 5.220209 GCCTAATGCGTTTTTCAATGCTAAC 60.220 40.000 0.00 0.00 44.27 2.34
2949 3183 4.862018 GCCTAATGCGTTTTTCAATGCTAA 59.138 37.500 0.00 0.00 44.27 3.09
2950 3184 4.420168 GCCTAATGCGTTTTTCAATGCTA 58.580 39.130 0.00 0.00 44.27 3.49
2951 3185 3.253230 GCCTAATGCGTTTTTCAATGCT 58.747 40.909 0.00 0.00 44.27 3.79
2952 3186 2.348362 GGCCTAATGCGTTTTTCAATGC 59.652 45.455 0.00 0.00 44.22 3.56
2953 3187 2.929398 GGGCCTAATGCGTTTTTCAATG 59.071 45.455 0.84 0.00 42.61 2.82
2954 3188 2.831526 AGGGCCTAATGCGTTTTTCAAT 59.168 40.909 2.82 0.00 42.61 2.57
2955 3189 2.243810 AGGGCCTAATGCGTTTTTCAA 58.756 42.857 2.82 0.00 42.61 2.69
2956 3190 1.917872 AGGGCCTAATGCGTTTTTCA 58.082 45.000 2.82 0.00 42.61 2.69
2957 3191 5.959618 ATATAGGGCCTAATGCGTTTTTC 57.040 39.130 18.91 0.00 42.61 2.29
2958 3192 6.775708 TCTATATAGGGCCTAATGCGTTTTT 58.224 36.000 18.91 0.00 42.61 1.94
2959 3193 6.368779 TCTATATAGGGCCTAATGCGTTTT 57.631 37.500 18.91 0.30 42.61 2.43
2960 3194 6.349300 CATCTATATAGGGCCTAATGCGTTT 58.651 40.000 18.91 1.12 42.61 3.60
2961 3195 5.163301 CCATCTATATAGGGCCTAATGCGTT 60.163 44.000 18.91 1.94 42.61 4.84
2962 3196 4.345257 CCATCTATATAGGGCCTAATGCGT 59.655 45.833 18.91 2.76 42.61 5.24
2963 3197 4.588951 TCCATCTATATAGGGCCTAATGCG 59.411 45.833 18.91 10.04 42.61 4.73
2964 3198 6.465035 CCTTCCATCTATATAGGGCCTAATGC 60.465 46.154 18.91 0.00 40.16 3.56
2965 3199 6.846505 TCCTTCCATCTATATAGGGCCTAATG 59.153 42.308 18.91 15.42 0.00 1.90
2966 3200 7.009960 TCCTTCCATCTATATAGGGCCTAAT 57.990 40.000 18.91 14.19 0.00 1.73
2967 3201 6.432190 TCCTTCCATCTATATAGGGCCTAA 57.568 41.667 18.91 7.61 0.00 2.69
2968 3202 5.103043 CCTCCTTCCATCTATATAGGGCCTA 60.103 48.000 17.16 17.16 0.00 3.93
2969 3203 4.327332 CCTCCTTCCATCTATATAGGGCCT 60.327 50.000 12.58 12.58 0.00 5.19
2970 3204 3.970640 CCTCCTTCCATCTATATAGGGCC 59.029 52.174 9.89 0.00 0.00 5.80
2971 3205 3.970640 CCCTCCTTCCATCTATATAGGGC 59.029 52.174 9.89 0.00 36.30 5.19
2972 3206 5.042979 ACTCCCTCCTTCCATCTATATAGGG 60.043 48.000 9.89 4.49 43.23 3.53
2973 3207 6.098716 ACTCCCTCCTTCCATCTATATAGG 57.901 45.833 9.89 0.00 0.00 2.57
2974 3208 6.775629 GCTACTCCCTCCTTCCATCTATATAG 59.224 46.154 3.10 3.10 0.00 1.31
2975 3209 6.452000 AGCTACTCCCTCCTTCCATCTATATA 59.548 42.308 0.00 0.00 0.00 0.86
2976 3210 5.257577 AGCTACTCCCTCCTTCCATCTATAT 59.742 44.000 0.00 0.00 0.00 0.86
2977 3211 4.608473 AGCTACTCCCTCCTTCCATCTATA 59.392 45.833 0.00 0.00 0.00 1.31
2978 3212 3.404425 AGCTACTCCCTCCTTCCATCTAT 59.596 47.826 0.00 0.00 0.00 1.98
2979 3213 2.792370 AGCTACTCCCTCCTTCCATCTA 59.208 50.000 0.00 0.00 0.00 1.98
2980 3214 1.578215 AGCTACTCCCTCCTTCCATCT 59.422 52.381 0.00 0.00 0.00 2.90
2981 3215 2.095604 AGCTACTCCCTCCTTCCATC 57.904 55.000 0.00 0.00 0.00 3.51
2982 3216 2.758295 GCTAGCTACTCCCTCCTTCCAT 60.758 54.545 7.70 0.00 0.00 3.41
2983 3217 1.411787 GCTAGCTACTCCCTCCTTCCA 60.412 57.143 7.70 0.00 0.00 3.53
2984 3218 1.133294 AGCTAGCTACTCCCTCCTTCC 60.133 57.143 17.69 0.00 0.00 3.46
2985 3219 2.364002 CAAGCTAGCTACTCCCTCCTTC 59.636 54.545 19.70 0.00 0.00 3.46
2986 3220 2.393646 CAAGCTAGCTACTCCCTCCTT 58.606 52.381 19.70 0.00 0.00 3.36
2987 3221 1.412361 CCAAGCTAGCTACTCCCTCCT 60.412 57.143 19.70 0.00 0.00 3.69
2988 3222 1.044611 CCAAGCTAGCTACTCCCTCC 58.955 60.000 19.70 0.00 0.00 4.30
2989 3223 1.783071 ACCAAGCTAGCTACTCCCTC 58.217 55.000 19.70 0.00 0.00 4.30
2990 3224 1.834263 CAACCAAGCTAGCTACTCCCT 59.166 52.381 19.70 0.00 0.00 4.20
2991 3225 1.744114 GCAACCAAGCTAGCTACTCCC 60.744 57.143 19.70 1.53 0.00 4.30
2992 3226 1.208293 AGCAACCAAGCTAGCTACTCC 59.792 52.381 19.70 4.86 44.50 3.85
2993 3227 2.093973 TCAGCAACCAAGCTAGCTACTC 60.094 50.000 19.70 4.56 44.54 2.59
2994 3228 1.902508 TCAGCAACCAAGCTAGCTACT 59.097 47.619 19.70 0.00 44.54 2.57
2995 3229 2.386661 TCAGCAACCAAGCTAGCTAC 57.613 50.000 19.70 3.77 44.54 3.58
3015 3252 4.334481 GCATCATATCCATGCATCGATTGA 59.666 41.667 12.21 14.38 45.19 2.57
3025 3262 2.510613 TGCCACAGCATCATATCCATG 58.489 47.619 0.00 0.00 46.52 3.66
3051 3288 1.394917 CTCGCAAGTCACCTGTATTGC 59.605 52.381 0.00 0.00 43.52 3.56
3052 3289 2.002586 CCTCGCAAGTCACCTGTATTG 58.997 52.381 0.00 0.00 39.48 1.90
3061 3298 1.607756 AGCTCCTCCTCGCAAGTCA 60.608 57.895 0.00 0.00 39.48 3.41
3113 3350 0.167470 CAATGAAGCACAGGCAGTCG 59.833 55.000 0.00 0.00 44.61 4.18
3163 3400 2.091588 CGATCTGTAACCAAAACCGTCG 59.908 50.000 0.00 0.00 0.00 5.12
3164 3401 3.319755 TCGATCTGTAACCAAAACCGTC 58.680 45.455 0.00 0.00 0.00 4.79
3165 3402 3.389925 TCGATCTGTAACCAAAACCGT 57.610 42.857 0.00 0.00 0.00 4.83
3166 3403 3.930229 TGATCGATCTGTAACCAAAACCG 59.070 43.478 25.02 0.00 0.00 4.44
3167 3404 4.935808 AGTGATCGATCTGTAACCAAAACC 59.064 41.667 25.02 0.00 0.00 3.27
3168 3405 7.591006 TTAGTGATCGATCTGTAACCAAAAC 57.409 36.000 25.02 11.29 0.00 2.43
3169 3406 8.786826 ATTTAGTGATCGATCTGTAACCAAAA 57.213 30.769 25.02 16.60 0.00 2.44
3170 3407 8.786826 AATTTAGTGATCGATCTGTAACCAAA 57.213 30.769 25.02 15.85 0.00 3.28
3171 3408 7.222031 CGAATTTAGTGATCGATCTGTAACCAA 59.778 37.037 25.02 8.42 38.82 3.67
3172 3409 6.695713 CGAATTTAGTGATCGATCTGTAACCA 59.304 38.462 25.02 9.68 38.82 3.67
3173 3410 6.144080 CCGAATTTAGTGATCGATCTGTAACC 59.856 42.308 25.02 12.43 38.82 2.85
3174 3411 6.696148 ACCGAATTTAGTGATCGATCTGTAAC 59.304 38.462 25.02 15.04 38.82 2.50
3175 3412 6.802608 ACCGAATTTAGTGATCGATCTGTAA 58.197 36.000 25.02 18.24 38.82 2.41
3176 3413 6.387041 ACCGAATTTAGTGATCGATCTGTA 57.613 37.500 25.02 13.79 38.82 2.74
3177 3414 5.263968 ACCGAATTTAGTGATCGATCTGT 57.736 39.130 25.02 14.75 38.82 3.41
3178 3415 6.918569 AGTAACCGAATTTAGTGATCGATCTG 59.081 38.462 25.02 4.99 38.82 2.90
3179 3416 7.040473 AGTAACCGAATTTAGTGATCGATCT 57.960 36.000 25.02 9.53 38.82 2.75
3180 3417 6.916387 TGAGTAACCGAATTTAGTGATCGATC 59.084 38.462 18.72 18.72 38.82 3.69
3181 3418 6.696148 GTGAGTAACCGAATTTAGTGATCGAT 59.304 38.462 0.00 0.00 38.82 3.59
3182 3419 6.032094 GTGAGTAACCGAATTTAGTGATCGA 58.968 40.000 0.00 0.00 38.82 3.59
3183 3420 5.052567 CGTGAGTAACCGAATTTAGTGATCG 60.053 44.000 0.00 0.00 36.39 3.69
3184 3421 5.231568 CCGTGAGTAACCGAATTTAGTGATC 59.768 44.000 0.00 0.00 0.00 2.92
3185 3422 5.107133 CCGTGAGTAACCGAATTTAGTGAT 58.893 41.667 0.00 0.00 0.00 3.06
3186 3423 4.487948 CCGTGAGTAACCGAATTTAGTGA 58.512 43.478 0.00 0.00 0.00 3.41
3187 3424 3.615496 CCCGTGAGTAACCGAATTTAGTG 59.385 47.826 0.00 0.00 0.00 2.74
3188 3425 3.259123 ACCCGTGAGTAACCGAATTTAGT 59.741 43.478 0.00 0.00 0.00 2.24
3189 3426 3.853475 ACCCGTGAGTAACCGAATTTAG 58.147 45.455 0.00 0.00 0.00 1.85
3190 3427 3.959535 ACCCGTGAGTAACCGAATTTA 57.040 42.857 0.00 0.00 0.00 1.40
3191 3428 2.845363 ACCCGTGAGTAACCGAATTT 57.155 45.000 0.00 0.00 0.00 1.82
3192 3429 3.588955 GTTACCCGTGAGTAACCGAATT 58.411 45.455 8.44 0.00 44.11 2.17
3193 3430 3.236632 GTTACCCGTGAGTAACCGAAT 57.763 47.619 8.44 0.00 44.11 3.34
3194 3431 2.723124 GTTACCCGTGAGTAACCGAA 57.277 50.000 8.44 0.00 44.11 4.30
3207 3444 1.676916 GCTAGGGAAACACGGTTACCC 60.677 57.143 0.00 0.00 40.71 3.69
3208 3445 1.676916 GGCTAGGGAAACACGGTTACC 60.677 57.143 0.00 0.00 0.00 2.85
3209 3446 1.676916 GGGCTAGGGAAACACGGTTAC 60.677 57.143 0.00 0.00 0.00 2.50
3210 3447 0.614812 GGGCTAGGGAAACACGGTTA 59.385 55.000 0.00 0.00 0.00 2.85
3211 3448 1.377612 GGGCTAGGGAAACACGGTT 59.622 57.895 0.00 0.00 0.00 4.44
3212 3449 2.599757 GGGGCTAGGGAAACACGGT 61.600 63.158 0.00 0.00 0.00 4.83
3213 3450 1.921869 ATGGGGCTAGGGAAACACGG 61.922 60.000 0.00 0.00 0.00 4.94
3214 3451 0.463833 GATGGGGCTAGGGAAACACG 60.464 60.000 0.00 0.00 0.00 4.49
3215 3452 0.463833 CGATGGGGCTAGGGAAACAC 60.464 60.000 0.00 0.00 0.00 3.32
3216 3453 1.632018 CCGATGGGGCTAGGGAAACA 61.632 60.000 0.00 0.00 0.00 2.83
3217 3454 1.148498 CCGATGGGGCTAGGGAAAC 59.852 63.158 0.00 0.00 0.00 2.78
3218 3455 0.622154 TTCCGATGGGGCTAGGGAAA 60.622 55.000 0.00 0.00 34.05 3.13
3219 3456 0.622154 TTTCCGATGGGGCTAGGGAA 60.622 55.000 0.00 0.00 35.11 3.97
3220 3457 0.622154 TTTTCCGATGGGGCTAGGGA 60.622 55.000 0.00 0.00 34.94 4.20
3221 3458 0.478507 ATTTTCCGATGGGGCTAGGG 59.521 55.000 0.00 0.00 34.94 3.53
3222 3459 2.637872 TCTATTTTCCGATGGGGCTAGG 59.362 50.000 0.00 0.00 34.94 3.02
3223 3460 4.351874 TTCTATTTTCCGATGGGGCTAG 57.648 45.455 0.00 0.00 34.94 3.42
3224 3461 4.993705 ATTCTATTTTCCGATGGGGCTA 57.006 40.909 0.00 0.00 34.94 3.93
3225 3462 3.884037 ATTCTATTTTCCGATGGGGCT 57.116 42.857 0.00 0.00 34.94 5.19
3226 3463 4.082733 GCTAATTCTATTTTCCGATGGGGC 60.083 45.833 0.00 0.00 34.94 5.80
3227 3464 5.070001 TGCTAATTCTATTTTCCGATGGGG 58.930 41.667 0.00 0.00 37.02 4.96
3228 3465 6.633500 TTGCTAATTCTATTTTCCGATGGG 57.367 37.500 0.00 0.00 0.00 4.00
3229 3466 7.809806 GGATTTGCTAATTCTATTTTCCGATGG 59.190 37.037 0.00 0.00 0.00 3.51
3230 3467 7.535258 CGGATTTGCTAATTCTATTTTCCGATG 59.465 37.037 8.87 0.00 36.73 3.84
3231 3468 7.228706 ACGGATTTGCTAATTCTATTTTCCGAT 59.771 33.333 17.77 4.41 37.84 4.18
3232 3469 6.540914 ACGGATTTGCTAATTCTATTTTCCGA 59.459 34.615 17.77 0.00 37.84 4.55
3233 3470 6.725246 ACGGATTTGCTAATTCTATTTTCCG 58.275 36.000 11.81 11.81 39.93 4.30
3234 3471 6.851330 CGACGGATTTGCTAATTCTATTTTCC 59.149 38.462 0.00 0.00 0.00 3.13
3235 3472 7.627340 TCGACGGATTTGCTAATTCTATTTTC 58.373 34.615 0.00 0.00 0.00 2.29
3236 3473 7.548196 TCGACGGATTTGCTAATTCTATTTT 57.452 32.000 0.00 0.00 0.00 1.82
3237 3474 7.548196 TTCGACGGATTTGCTAATTCTATTT 57.452 32.000 0.00 0.00 0.00 1.40
3238 3475 7.730364 ATTCGACGGATTTGCTAATTCTATT 57.270 32.000 0.00 0.00 0.00 1.73
3239 3476 7.730364 AATTCGACGGATTTGCTAATTCTAT 57.270 32.000 0.00 0.00 0.00 1.98
3240 3477 8.827177 ATAATTCGACGGATTTGCTAATTCTA 57.173 30.769 6.70 0.00 0.00 2.10
3241 3478 7.730364 ATAATTCGACGGATTTGCTAATTCT 57.270 32.000 6.70 0.00 0.00 2.40
3242 3479 7.149128 GCAATAATTCGACGGATTTGCTAATTC 60.149 37.037 15.32 0.00 0.00 2.17
3243 3480 6.636850 GCAATAATTCGACGGATTTGCTAATT 59.363 34.615 15.32 3.79 0.00 1.40
3244 3481 6.142817 GCAATAATTCGACGGATTTGCTAAT 58.857 36.000 15.32 0.00 0.00 1.73
3245 3482 5.065346 TGCAATAATTCGACGGATTTGCTAA 59.935 36.000 20.67 4.84 0.00 3.09
3246 3483 4.572795 TGCAATAATTCGACGGATTTGCTA 59.427 37.500 20.67 9.16 0.00 3.49
3247 3484 3.376859 TGCAATAATTCGACGGATTTGCT 59.623 39.130 20.67 1.10 0.00 3.91
3248 3485 3.482110 GTGCAATAATTCGACGGATTTGC 59.518 43.478 15.62 15.62 0.00 3.68
3249 3486 3.718864 CGTGCAATAATTCGACGGATTTG 59.281 43.478 6.70 1.37 0.00 2.32
3250 3487 3.619483 TCGTGCAATAATTCGACGGATTT 59.381 39.130 6.70 0.00 0.00 2.17
3251 3488 3.191669 TCGTGCAATAATTCGACGGATT 58.808 40.909 6.60 6.60 0.00 3.01
3252 3489 2.816689 TCGTGCAATAATTCGACGGAT 58.183 42.857 0.00 0.00 0.00 4.18
3253 3490 2.281140 TCGTGCAATAATTCGACGGA 57.719 45.000 0.00 0.00 0.00 4.69
3254 3491 3.377434 TTTCGTGCAATAATTCGACGG 57.623 42.857 0.00 0.00 32.14 4.79
3255 3492 5.732647 AGATTTTTCGTGCAATAATTCGACG 59.267 36.000 0.00 0.00 32.14 5.12
3256 3493 6.740905 TGAGATTTTTCGTGCAATAATTCGAC 59.259 34.615 0.00 0.00 32.14 4.20
3257 3494 6.836953 TGAGATTTTTCGTGCAATAATTCGA 58.163 32.000 0.00 0.00 0.00 3.71
3258 3495 6.960992 TCTGAGATTTTTCGTGCAATAATTCG 59.039 34.615 0.00 0.00 0.00 3.34
3259 3496 8.740369 CATCTGAGATTTTTCGTGCAATAATTC 58.260 33.333 0.00 0.00 0.00 2.17
3260 3497 8.461222 TCATCTGAGATTTTTCGTGCAATAATT 58.539 29.630 0.00 0.00 0.00 1.40
3261 3498 7.988737 TCATCTGAGATTTTTCGTGCAATAAT 58.011 30.769 0.00 0.00 0.00 1.28
3262 3499 7.376435 TCATCTGAGATTTTTCGTGCAATAA 57.624 32.000 0.00 0.00 0.00 1.40
3263 3500 6.983474 TCATCTGAGATTTTTCGTGCAATA 57.017 33.333 0.00 0.00 0.00 1.90
3264 3501 5.885230 TCATCTGAGATTTTTCGTGCAAT 57.115 34.783 0.00 0.00 0.00 3.56
3265 3502 5.885230 ATCATCTGAGATTTTTCGTGCAA 57.115 34.783 0.00 0.00 0.00 4.08
3266 3503 5.163723 GGAATCATCTGAGATTTTTCGTGCA 60.164 40.000 0.00 0.00 38.30 4.57
3267 3504 5.163723 TGGAATCATCTGAGATTTTTCGTGC 60.164 40.000 0.00 0.00 38.30 5.34
3268 3505 6.426980 TGGAATCATCTGAGATTTTTCGTG 57.573 37.500 0.00 0.00 38.30 4.35
3269 3506 7.452880 TTTGGAATCATCTGAGATTTTTCGT 57.547 32.000 0.00 0.00 38.30 3.85
3270 3507 9.661187 CTATTTGGAATCATCTGAGATTTTTCG 57.339 33.333 0.00 0.00 38.30 3.46
3274 3511 9.917887 ACTTCTATTTGGAATCATCTGAGATTT 57.082 29.630 0.00 0.00 38.30 2.17
3275 3512 9.917887 AACTTCTATTTGGAATCATCTGAGATT 57.082 29.630 0.00 0.00 40.75 2.40
3276 3513 9.917887 AAACTTCTATTTGGAATCATCTGAGAT 57.082 29.630 0.00 0.00 0.00 2.75
3277 3514 9.170734 CAAACTTCTATTTGGAATCATCTGAGA 57.829 33.333 0.00 0.00 36.17 3.27
3278 3515 9.170734 TCAAACTTCTATTTGGAATCATCTGAG 57.829 33.333 0.00 0.00 39.57 3.35
3279 3516 9.170734 CTCAAACTTCTATTTGGAATCATCTGA 57.829 33.333 0.00 0.00 39.57 3.27
3280 3517 8.954350 ACTCAAACTTCTATTTGGAATCATCTG 58.046 33.333 0.00 0.00 39.57 2.90
3283 3520 9.739276 TGTACTCAAACTTCTATTTGGAATCAT 57.261 29.630 0.00 0.00 39.57 2.45
3284 3521 9.567776 TTGTACTCAAACTTCTATTTGGAATCA 57.432 29.630 0.00 0.00 39.57 2.57
3297 3534 9.040939 GCCATTTACAAATTTGTACTCAAACTT 57.959 29.630 26.72 7.36 44.69 2.66
3298 3535 8.421002 AGCCATTTACAAATTTGTACTCAAACT 58.579 29.630 26.72 17.59 44.69 2.66
3299 3536 8.487176 CAGCCATTTACAAATTTGTACTCAAAC 58.513 33.333 26.72 15.99 44.69 2.93
3300 3537 8.200792 ACAGCCATTTACAAATTTGTACTCAAA 58.799 29.630 26.72 20.71 42.84 2.69
3301 3538 7.721402 ACAGCCATTTACAAATTTGTACTCAA 58.279 30.769 26.72 19.60 42.84 3.02
3302 3539 7.283625 ACAGCCATTTACAAATTTGTACTCA 57.716 32.000 26.72 15.87 42.84 3.41
3303 3540 9.685828 TTAACAGCCATTTACAAATTTGTACTC 57.314 29.630 26.72 15.09 42.84 2.59
3304 3541 9.691362 CTTAACAGCCATTTACAAATTTGTACT 57.309 29.630 26.72 18.18 42.84 2.73
3305 3542 8.921670 CCTTAACAGCCATTTACAAATTTGTAC 58.078 33.333 26.72 16.47 42.84 2.90
3306 3543 7.600752 GCCTTAACAGCCATTTACAAATTTGTA 59.399 33.333 23.91 23.91 42.35 2.41
3307 3544 6.426633 GCCTTAACAGCCATTTACAAATTTGT 59.573 34.615 25.99 25.99 44.86 2.83
3308 3545 6.650390 AGCCTTAACAGCCATTTACAAATTTG 59.350 34.615 16.67 16.67 0.00 2.32
3309 3546 6.768483 AGCCTTAACAGCCATTTACAAATTT 58.232 32.000 0.00 0.00 0.00 1.82
3310 3547 6.358974 AGCCTTAACAGCCATTTACAAATT 57.641 33.333 0.00 0.00 0.00 1.82
3311 3548 6.663523 AGTAGCCTTAACAGCCATTTACAAAT 59.336 34.615 0.00 0.00 0.00 2.32
3312 3549 6.007703 AGTAGCCTTAACAGCCATTTACAAA 58.992 36.000 0.00 0.00 0.00 2.83
3313 3550 5.566469 AGTAGCCTTAACAGCCATTTACAA 58.434 37.500 0.00 0.00 0.00 2.41
3314 3551 5.174037 AGTAGCCTTAACAGCCATTTACA 57.826 39.130 0.00 0.00 0.00 2.41
3315 3552 5.183228 TGAGTAGCCTTAACAGCCATTTAC 58.817 41.667 0.00 0.00 0.00 2.01
3316 3553 5.429681 TGAGTAGCCTTAACAGCCATTTA 57.570 39.130 0.00 0.00 0.00 1.40
3317 3554 4.301072 TGAGTAGCCTTAACAGCCATTT 57.699 40.909 0.00 0.00 0.00 2.32
3318 3555 4.510167 ATGAGTAGCCTTAACAGCCATT 57.490 40.909 0.00 0.00 0.00 3.16
3319 3556 4.656112 ACTATGAGTAGCCTTAACAGCCAT 59.344 41.667 0.00 0.00 0.00 4.40
3320 3557 4.030913 ACTATGAGTAGCCTTAACAGCCA 58.969 43.478 0.00 0.00 0.00 4.75
3321 3558 4.372656 CACTATGAGTAGCCTTAACAGCC 58.627 47.826 0.00 0.00 0.00 4.85
3322 3559 4.372656 CCACTATGAGTAGCCTTAACAGC 58.627 47.826 0.00 0.00 0.00 4.40
3323 3560 4.202264 CCCCACTATGAGTAGCCTTAACAG 60.202 50.000 0.00 0.00 0.00 3.16
3324 3561 3.709653 CCCCACTATGAGTAGCCTTAACA 59.290 47.826 0.00 0.00 0.00 2.41
3325 3562 3.965347 TCCCCACTATGAGTAGCCTTAAC 59.035 47.826 0.00 0.00 0.00 2.01
3326 3563 4.223953 CTCCCCACTATGAGTAGCCTTAA 58.776 47.826 0.00 0.00 0.00 1.85
3327 3564 3.206866 ACTCCCCACTATGAGTAGCCTTA 59.793 47.826 0.00 0.00 39.96 2.69
3328 3565 2.022918 ACTCCCCACTATGAGTAGCCTT 60.023 50.000 0.00 0.00 39.96 4.35
3329 3566 1.576272 ACTCCCCACTATGAGTAGCCT 59.424 52.381 0.00 0.00 39.96 4.58
3330 3567 1.689273 CACTCCCCACTATGAGTAGCC 59.311 57.143 0.00 0.00 39.76 3.93
3331 3568 2.362717 GACACTCCCCACTATGAGTAGC 59.637 54.545 0.00 0.00 39.76 3.58
3332 3569 3.632333 TGACACTCCCCACTATGAGTAG 58.368 50.000 0.00 0.00 39.76 2.57
3333 3570 3.750501 TGACACTCCCCACTATGAGTA 57.249 47.619 0.00 0.00 39.76 2.59
3334 3571 2.623418 TGACACTCCCCACTATGAGT 57.377 50.000 0.00 0.00 42.41 3.41
3335 3572 6.013379 AGTATATGACACTCCCCACTATGAG 58.987 44.000 0.00 0.00 34.73 2.90
3336 3573 5.965486 AGTATATGACACTCCCCACTATGA 58.035 41.667 0.00 0.00 0.00 2.15
3337 3574 7.776618 TTAGTATATGACACTCCCCACTATG 57.223 40.000 0.00 0.00 0.00 2.23
3339 3576 9.696572 GATATTAGTATATGACACTCCCCACTA 57.303 37.037 0.00 0.00 0.00 2.74
3340 3577 8.177456 TGATATTAGTATATGACACTCCCCACT 58.823 37.037 0.00 0.00 0.00 4.00
3341 3578 8.362464 TGATATTAGTATATGACACTCCCCAC 57.638 38.462 0.00 0.00 0.00 4.61
3342 3579 8.981659 CATGATATTAGTATATGACACTCCCCA 58.018 37.037 0.00 0.00 0.00 4.96
3343 3580 7.928706 GCATGATATTAGTATATGACACTCCCC 59.071 40.741 0.00 0.00 0.00 4.81
3344 3581 8.478066 TGCATGATATTAGTATATGACACTCCC 58.522 37.037 0.00 0.00 0.00 4.30
3380 3617 8.825774 TGCATTATGGAGGTAATATCATACACT 58.174 33.333 0.00 0.00 0.00 3.55
3381 3618 9.618890 ATGCATTATGGAGGTAATATCATACAC 57.381 33.333 0.00 0.00 0.00 2.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.