Multiple sequence alignment - TraesCS2A01G552100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G552100 chr2A 100.000 6153 0 0 1 6153 758416234 758422386 0.000000e+00 11363.0
1 TraesCS2A01G552100 chr2A 100.000 31 0 0 5858 5888 758421367 758421397 2.400000e-04 58.4
2 TraesCS2A01G552100 chr2A 100.000 31 0 0 5134 5164 758422091 758422121 2.400000e-04 58.4
3 TraesCS2A01G552100 chr2B 92.841 3450 156 31 2284 5722 770757732 770761101 0.000000e+00 4918.0
4 TraesCS2A01G552100 chr2B 90.310 516 41 4 1 508 770753175 770753689 0.000000e+00 667.0
5 TraesCS2A01G552100 chr2B 85.839 572 51 19 904 1457 770756131 770756690 1.150000e-161 580.0
6 TraesCS2A01G552100 chr2B 85.261 536 42 20 1688 2207 770757192 770757706 9.140000e-143 518.0
7 TraesCS2A01G552100 chr2B 90.076 131 8 2 1530 1656 770756990 770757119 1.370000e-36 165.0
8 TraesCS2A01G552100 chr2B 90.625 64 6 0 28 91 771172934 771172871 1.100000e-12 86.1
9 TraesCS2A01G552100 chr2B 89.394 66 6 1 322 386 771161481 771161416 1.420000e-11 82.4
10 TraesCS2A01G552100 chr2B 100.000 30 0 0 5858 5887 770760516 770760545 8.620000e-04 56.5
11 TraesCS2A01G552100 chr2D 94.461 2690 76 23 2892 5557 627961950 627964590 0.000000e+00 4074.0
12 TraesCS2A01G552100 chr2D 95.947 913 22 6 1768 2667 627960683 627961593 0.000000e+00 1467.0
13 TraesCS2A01G552100 chr2D 91.445 865 61 11 1 858 627958745 627959603 0.000000e+00 1175.0
14 TraesCS2A01G552100 chr2D 94.681 752 29 6 902 1649 627959777 627960521 0.000000e+00 1157.0
15 TraesCS2A01G552100 chr2D 86.517 267 18 5 5596 5857 627964596 627964849 1.690000e-70 278.0
16 TraesCS2A01G552100 chr2D 100.000 48 0 0 1679 1726 627960634 627960681 8.500000e-14 89.8
17 TraesCS2A01G552100 chr2D 100.000 34 0 0 5858 5891 627964167 627964200 5.150000e-06 63.9
18 TraesCS2A01G552100 chr1B 85.953 598 35 22 1684 2248 65683372 65683953 1.480000e-165 593.0
19 TraesCS2A01G552100 chr1B 93.443 122 8 0 1343 1464 65682934 65683055 1.360000e-41 182.0
20 TraesCS2A01G552100 chr1B 93.103 116 4 1 1538 1649 65683054 65683169 3.820000e-37 167.0
21 TraesCS2A01G552100 chr1B 95.918 49 2 0 5403 5451 420658792 420658840 5.110000e-11 80.5
22 TraesCS2A01G552100 chr1B 97.826 46 1 0 5411 5456 658795642 658795687 5.110000e-11 80.5
23 TraesCS2A01G552100 chr6A 74.689 1205 265 30 3917 5102 59786198 59787381 3.310000e-137 499.0
24 TraesCS2A01G552100 chr6A 76.418 564 122 8 3957 4516 59810365 59810921 1.680000e-75 294.0
25 TraesCS2A01G552100 chr6B 77.562 566 112 12 3957 4516 114026316 114026872 1.650000e-85 327.0
26 TraesCS2A01G552100 chr6D 77.128 564 118 8 3957 4516 45480238 45480794 3.580000e-82 316.0
27 TraesCS2A01G552100 chr3B 94.000 50 3 0 5408 5457 163716352 163716401 6.610000e-10 76.8
28 TraesCS2A01G552100 chr7D 93.878 49 2 1 5410 5458 591834341 591834294 8.560000e-09 73.1
29 TraesCS2A01G552100 chr1A 93.750 48 3 0 5411 5458 380965011 380965058 8.560000e-09 73.1
30 TraesCS2A01G552100 chr5D 95.455 44 2 0 5414 5457 549469908 549469865 3.080000e-08 71.3
31 TraesCS2A01G552100 chr1D 95.455 44 2 0 5411 5454 386814926 386814969 3.080000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G552100 chr2A 758416234 758422386 6152 False 3826.600000 11363 100.000000 1 6153 3 chr2A.!!$F1 6152
1 TraesCS2A01G552100 chr2B 770753175 770761101 7926 False 1150.750000 4918 90.721167 1 5887 6 chr2B.!!$F1 5886
2 TraesCS2A01G552100 chr2D 627958745 627964849 6104 False 1186.385714 4074 94.721571 1 5891 7 chr2D.!!$F1 5890
3 TraesCS2A01G552100 chr1B 65682934 65683953 1019 False 314.000000 593 90.833000 1343 2248 3 chr1B.!!$F3 905
4 TraesCS2A01G552100 chr6A 59786198 59787381 1183 False 499.000000 499 74.689000 3917 5102 1 chr6A.!!$F1 1185
5 TraesCS2A01G552100 chr6A 59810365 59810921 556 False 294.000000 294 76.418000 3957 4516 1 chr6A.!!$F2 559
6 TraesCS2A01G552100 chr6B 114026316 114026872 556 False 327.000000 327 77.562000 3957 4516 1 chr6B.!!$F1 559
7 TraesCS2A01G552100 chr6D 45480238 45480794 556 False 316.000000 316 77.128000 3957 4516 1 chr6D.!!$F1 559

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
746 842 0.111253 AGCAGGGAAGTTCAACCAGG 59.889 55.0 5.01 0.0 0.00 4.45 F
1503 3684 0.965363 CCCCTCCCGTTTCCAATGTG 60.965 60.0 0.00 0.0 0.00 3.21 F
2694 5361 0.385390 CTTGCTTTGTTCTGCCGGTT 59.615 50.0 1.90 0.0 0.00 4.44 F
3426 6246 0.026803 GGCAGCGAAATCACATCGTC 59.973 55.0 0.00 0.0 42.15 4.20 F
3427 6247 0.721154 GCAGCGAAATCACATCGTCA 59.279 50.0 0.00 0.0 42.15 4.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1966 4624 0.104120 GGGGTCAAGTGCCACAAAAC 59.896 55.000 0.00 0.00 0.00 2.43 R
2775 5442 0.038801 GCTTGAAACCAAGGCTCTGC 60.039 55.000 7.21 0.00 40.94 4.26 R
3502 6322 3.152341 GGCAAGAGTCATTCCATATGGG 58.848 50.000 21.78 6.03 35.41 4.00 R
5115 7942 0.685660 AACCTGGTCTTCTTCCGTCC 59.314 55.000 0.00 0.00 0.00 4.79 R
5167 7994 2.897846 CAACGGTGGGACGCAACA 60.898 61.111 8.41 0.00 43.02 3.33 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
62 63 6.763355 ACTAGACATGATGGTTATGATGGTC 58.237 40.000 0.00 0.00 32.90 4.02
121 122 6.930731 TCTGGCTCAAAACAGTTAAAAACTT 58.069 32.000 0.00 0.00 40.46 2.66
131 132 6.451064 ACAGTTAAAAACTTTGAGGTCCAG 57.549 37.500 0.00 0.00 40.46 3.86
216 220 6.367149 TGATGCGCAGAATCTCATAGTTATTC 59.633 38.462 18.32 2.19 0.00 1.75
217 221 4.681483 TGCGCAGAATCTCATAGTTATTCG 59.319 41.667 5.66 0.00 35.30 3.34
285 291 6.764308 ATTGGAAAGGATATCGCAATATGG 57.236 37.500 0.00 0.00 0.00 2.74
331 337 5.067273 AGGACGTCATGGAATTAACAAACA 58.933 37.500 18.91 0.00 0.00 2.83
439 448 0.327924 TTCACCGCCCAAGATGACAT 59.672 50.000 0.00 0.00 0.00 3.06
443 452 1.837439 ACCGCCCAAGATGACATTAGA 59.163 47.619 0.00 0.00 0.00 2.10
447 456 3.745480 CGCCCAAGATGACATTAGACCAT 60.745 47.826 0.00 0.00 0.00 3.55
449 458 4.757149 GCCCAAGATGACATTAGACCATAC 59.243 45.833 0.00 0.00 0.00 2.39
514 523 2.533916 TGAGAGATTGTGTGCTCCTCT 58.466 47.619 0.00 0.00 36.97 3.69
531 540 5.684552 GCTCCTCTAACTGATGCTGAGATTT 60.685 44.000 0.00 0.00 0.00 2.17
541 550 4.577693 TGATGCTGAGATTTAGAATGCACC 59.422 41.667 0.00 0.00 0.00 5.01
553 562 1.193203 GAATGCACCGTCTATGATGCG 59.807 52.381 0.00 0.00 41.07 4.73
597 606 3.347216 GAAGGTTTCATAGCAGGCTTCA 58.653 45.455 0.00 0.00 0.00 3.02
601 610 5.509498 AGGTTTCATAGCAGGCTTCAATAA 58.491 37.500 0.00 0.00 0.00 1.40
602 611 5.951747 AGGTTTCATAGCAGGCTTCAATAAA 59.048 36.000 0.00 0.00 0.00 1.40
604 613 6.920210 GGTTTCATAGCAGGCTTCAATAAATC 59.080 38.462 0.00 0.00 0.00 2.17
606 615 6.872628 TCATAGCAGGCTTCAATAAATCAG 57.127 37.500 0.00 0.00 0.00 2.90
607 616 5.240183 TCATAGCAGGCTTCAATAAATCAGC 59.760 40.000 0.00 0.00 0.00 4.26
608 617 3.359033 AGCAGGCTTCAATAAATCAGCA 58.641 40.909 0.00 0.00 33.64 4.41
619 672 9.720667 CTTCAATAAATCAGCATTTTATGACGA 57.279 29.630 0.00 0.00 33.95 4.20
631 684 6.615839 GCATTTTATGACGAGTAAGGTATCGC 60.616 42.308 0.00 0.00 42.61 4.58
665 761 0.801251 AGAAGCATTGCTCTCGTTGC 59.199 50.000 12.39 0.00 38.25 4.17
699 795 3.201342 CGGATTCATACCGCCTCAG 57.799 57.895 0.00 0.00 43.74 3.35
725 821 3.443045 GTGGCGGTGGATGGCTTG 61.443 66.667 0.00 0.00 0.00 4.01
729 825 3.056313 GCGGTGGATGGCTTGAAGC 62.056 63.158 9.04 9.04 41.46 3.86
741 837 1.956477 GCTTGAAGCAGGGAAGTTCAA 59.044 47.619 13.09 0.00 41.89 2.69
746 842 0.111253 AGCAGGGAAGTTCAACCAGG 59.889 55.000 5.01 0.00 0.00 4.45
751 847 3.009033 CAGGGAAGTTCAACCAGGTATGA 59.991 47.826 5.01 0.00 0.00 2.15
755 851 4.265073 GAAGTTCAACCAGGTATGATGCT 58.735 43.478 0.00 0.00 0.00 3.79
799 896 4.680171 GCTCCTTGCGTTTACTATTTGT 57.320 40.909 0.00 0.00 0.00 2.83
803 900 7.912383 GCTCCTTGCGTTTACTATTTGTAATA 58.088 34.615 0.00 0.00 40.41 0.98
859 956 6.055588 AGATGACAACCTCGTAAAATATGGG 58.944 40.000 0.00 0.00 0.00 4.00
882 2923 2.905075 TGACCGTCATGCTTGATTAGG 58.095 47.619 5.49 11.65 33.56 2.69
883 2924 2.236146 TGACCGTCATGCTTGATTAGGT 59.764 45.455 19.70 19.70 38.69 3.08
884 2925 3.449377 TGACCGTCATGCTTGATTAGGTA 59.551 43.478 19.66 10.70 37.22 3.08
886 2927 5.036117 ACCGTCATGCTTGATTAGGTATT 57.964 39.130 18.80 3.16 36.14 1.89
887 2928 5.437060 ACCGTCATGCTTGATTAGGTATTT 58.563 37.500 18.80 2.90 36.14 1.40
888 2929 6.588204 ACCGTCATGCTTGATTAGGTATTTA 58.412 36.000 18.80 0.00 36.14 1.40
889 2930 6.706270 ACCGTCATGCTTGATTAGGTATTTAG 59.294 38.462 18.80 0.00 36.14 1.85
890 2931 6.147821 CCGTCATGCTTGATTAGGTATTTAGG 59.852 42.308 5.49 0.00 33.56 2.69
891 2932 6.706270 CGTCATGCTTGATTAGGTATTTAGGT 59.294 38.462 5.49 0.00 33.56 3.08
892 2933 7.226720 CGTCATGCTTGATTAGGTATTTAGGTT 59.773 37.037 5.49 0.00 33.56 3.50
893 2934 8.345565 GTCATGCTTGATTAGGTATTTAGGTTG 58.654 37.037 5.49 0.00 33.56 3.77
894 2935 7.502226 TCATGCTTGATTAGGTATTTAGGTTGG 59.498 37.037 0.00 0.00 0.00 3.77
895 2936 6.126409 TGCTTGATTAGGTATTTAGGTTGGG 58.874 40.000 0.00 0.00 0.00 4.12
898 3057 7.776500 GCTTGATTAGGTATTTAGGTTGGGTTA 59.224 37.037 0.00 0.00 0.00 2.85
928 3087 5.803020 AAAACAAGGAAGCGAGACATATC 57.197 39.130 0.00 0.00 0.00 1.63
929 3088 3.085443 ACAAGGAAGCGAGACATATCG 57.915 47.619 0.00 0.00 45.48 2.92
1130 3295 2.586357 GGCGCAGGGTCGAGAATC 60.586 66.667 10.83 0.00 0.00 2.52
1326 3507 4.020617 CTGTCGAAGCTGCCCCCA 62.021 66.667 0.00 0.00 0.00 4.96
1481 3662 4.436998 CCTGCCTGACCGACCGAC 62.437 72.222 0.00 0.00 0.00 4.79
1482 3663 4.436998 CTGCCTGACCGACCGACC 62.437 72.222 0.00 0.00 0.00 4.79
1503 3684 0.965363 CCCCTCCCGTTTCCAATGTG 60.965 60.000 0.00 0.00 0.00 3.21
1531 3934 1.054406 TCCATCCGGTTCCTGGATCC 61.054 60.000 12.94 12.94 44.41 3.36
1658 4129 9.774742 GAAACTTTATTCTGTTATTACTGCTGG 57.225 33.333 0.00 0.00 0.00 4.85
1726 4334 9.586732 AGATGATAGTCTAAATTAGCTGTCTCT 57.413 33.333 15.77 13.52 0.00 3.10
1754 4362 3.243535 GCTACCTTAAAATGCTGATGCCC 60.244 47.826 0.00 0.00 38.71 5.36
1851 4476 2.439507 AGTGTCTGTCTTCACCATTGGT 59.560 45.455 1.37 1.37 35.62 3.67
1966 4624 7.563888 TCAATCTGATTTCTGATAAGCCTTG 57.436 36.000 0.00 0.00 34.69 3.61
1967 4625 7.114754 TCAATCTGATTTCTGATAAGCCTTGT 58.885 34.615 0.00 0.00 34.69 3.16
2030 4692 4.023536 GCATGTCTTTCGAAACTGGGTAAA 60.024 41.667 6.47 0.00 0.00 2.01
2126 4788 1.986882 CTGCTTTTGGGAGTTGTCCT 58.013 50.000 0.00 0.00 43.36 3.85
2547 5211 1.883926 GTTCCCACGTTGCACCTTTAT 59.116 47.619 0.00 0.00 0.00 1.40
2611 5277 2.424842 GACATCAGGGTTGGGTGCCA 62.425 60.000 0.00 0.00 0.00 4.92
2662 5329 2.288961 TGATCGGCGTCTTTACCTTC 57.711 50.000 6.85 0.00 0.00 3.46
2693 5360 1.455383 CCTTGCTTTGTTCTGCCGGT 61.455 55.000 1.90 0.00 0.00 5.28
2694 5361 0.385390 CTTGCTTTGTTCTGCCGGTT 59.615 50.000 1.90 0.00 0.00 4.44
2767 5434 7.463469 AAGTTGCAAGTAATGTTTTTGTAGC 57.537 32.000 7.33 0.00 0.00 3.58
2768 5435 6.805713 AGTTGCAAGTAATGTTTTTGTAGCT 58.194 32.000 4.57 0.00 0.00 3.32
2769 5436 7.264947 AGTTGCAAGTAATGTTTTTGTAGCTT 58.735 30.769 4.57 0.00 27.26 3.74
2770 5437 7.763985 AGTTGCAAGTAATGTTTTTGTAGCTTT 59.236 29.630 4.57 0.00 27.26 3.51
2771 5438 7.462109 TGCAAGTAATGTTTTTGTAGCTTTG 57.538 32.000 0.00 0.00 0.00 2.77
2772 5439 6.478344 TGCAAGTAATGTTTTTGTAGCTTTGG 59.522 34.615 0.00 0.00 0.00 3.28
2773 5440 6.478673 GCAAGTAATGTTTTTGTAGCTTTGGT 59.521 34.615 0.00 0.00 0.00 3.67
2774 5441 7.011016 GCAAGTAATGTTTTTGTAGCTTTGGTT 59.989 33.333 0.00 0.00 0.00 3.67
2775 5442 8.327429 CAAGTAATGTTTTTGTAGCTTTGGTTG 58.673 33.333 0.00 0.00 0.00 3.77
2776 5443 5.733226 AATGTTTTTGTAGCTTTGGTTGC 57.267 34.783 0.00 0.00 0.00 4.17
2777 5444 4.193826 TGTTTTTGTAGCTTTGGTTGCA 57.806 36.364 0.00 0.00 0.00 4.08
2778 5445 4.180057 TGTTTTTGTAGCTTTGGTTGCAG 58.820 39.130 0.00 0.00 0.00 4.41
2779 5446 4.081972 TGTTTTTGTAGCTTTGGTTGCAGA 60.082 37.500 0.00 0.00 0.00 4.26
2780 5447 3.988379 TTTGTAGCTTTGGTTGCAGAG 57.012 42.857 0.00 0.00 0.00 3.35
2781 5448 1.238439 TGTAGCTTTGGTTGCAGAGC 58.762 50.000 0.00 0.00 35.42 4.09
2782 5449 0.523519 GTAGCTTTGGTTGCAGAGCC 59.476 55.000 0.00 0.00 35.79 4.70
2820 5487 1.768870 GCTTGGGTAAGGCCATCTCTA 59.231 52.381 5.01 0.00 39.65 2.43
2861 5528 5.749596 TGTTGTGTTATCAGTTTCAGTGG 57.250 39.130 0.00 0.00 0.00 4.00
2980 5780 1.729586 TGTCTGGGTAGGAAGCACTT 58.270 50.000 0.00 0.00 0.00 3.16
3015 5815 4.678743 GGGAGGGGCACAACCACC 62.679 72.222 5.44 0.00 46.79 4.61
3022 5822 1.524008 GGGCACAACCACCTTAGCAC 61.524 60.000 0.00 0.00 42.05 4.40
3033 5833 0.108138 CCTTAGCACGGTCTCCTTGG 60.108 60.000 0.00 0.00 0.00 3.61
3057 5857 1.005748 CTTGAGCAGAGCCACGTGA 60.006 57.895 19.30 0.00 0.00 4.35
3059 5859 0.179059 TTGAGCAGAGCCACGTGAAA 60.179 50.000 19.30 0.00 0.00 2.69
3090 5890 4.937620 TGTATCTTGGCACAGACAGAAATC 59.062 41.667 0.00 0.00 42.39 2.17
3102 5902 5.991606 ACAGACAGAAATCGAAAATGACAGA 59.008 36.000 0.00 0.00 0.00 3.41
3177 5978 1.985159 TCCTTGACACCTGCTATGGTT 59.015 47.619 0.00 0.00 38.45 3.67
3183 5984 1.930656 ACCTGCTATGGTTGCCCCT 60.931 57.895 0.00 0.00 36.89 4.79
3218 6019 2.168521 GCCTACAGCATAGTCAACCTGA 59.831 50.000 0.00 0.00 42.97 3.86
3285 6086 6.489603 TGCAGTAATCTTTCCCTTATTTCCA 58.510 36.000 0.00 0.00 0.00 3.53
3309 6110 1.497161 AAACTCATCCCTACCCCTCG 58.503 55.000 0.00 0.00 0.00 4.63
3322 6123 4.528596 CCTACCCCTCGTCTGATTATGAAT 59.471 45.833 0.00 0.00 0.00 2.57
3331 6132 7.327275 CCTCGTCTGATTATGAATAGCAGTTAC 59.673 40.741 0.00 0.00 0.00 2.50
3341 6142 5.076873 TGAATAGCAGTTACCTTTGCCTTT 58.923 37.500 0.00 0.00 41.17 3.11
3342 6143 5.183140 TGAATAGCAGTTACCTTTGCCTTTC 59.817 40.000 0.00 0.00 41.17 2.62
3345 6146 2.229062 GCAGTTACCTTTGCCTTTCCTC 59.771 50.000 0.00 0.00 34.28 3.71
3349 6150 1.605753 ACCTTTGCCTTTCCTCGTTC 58.394 50.000 0.00 0.00 0.00 3.95
3351 6152 2.162681 CCTTTGCCTTTCCTCGTTCAT 58.837 47.619 0.00 0.00 0.00 2.57
3353 6154 3.568538 CTTTGCCTTTCCTCGTTCATTG 58.431 45.455 0.00 0.00 0.00 2.82
3354 6155 2.559698 TGCCTTTCCTCGTTCATTGA 57.440 45.000 0.00 0.00 0.00 2.57
3355 6156 2.857483 TGCCTTTCCTCGTTCATTGAA 58.143 42.857 0.00 0.00 0.00 2.69
3357 6158 4.584874 TGCCTTTCCTCGTTCATTGAATA 58.415 39.130 1.78 0.00 0.00 1.75
3358 6159 5.007034 TGCCTTTCCTCGTTCATTGAATAA 58.993 37.500 1.78 0.00 0.00 1.40
3370 6190 6.314784 GTTCATTGAATAAAAGAGTCGGTGG 58.685 40.000 1.78 0.00 0.00 4.61
3401 6221 3.397613 AATGCTGAGGGCGCTCTCC 62.398 63.158 33.48 19.90 45.43 3.71
3424 6244 1.570813 TAGGCAGCGAAATCACATCG 58.429 50.000 0.00 0.00 42.99 3.84
3425 6245 0.391661 AGGCAGCGAAATCACATCGT 60.392 50.000 0.00 0.00 42.15 3.73
3426 6246 0.026803 GGCAGCGAAATCACATCGTC 59.973 55.000 0.00 0.00 42.15 4.20
3427 6247 0.721154 GCAGCGAAATCACATCGTCA 59.279 50.000 0.00 0.00 42.15 4.35
3428 6248 1.328680 GCAGCGAAATCACATCGTCAT 59.671 47.619 0.00 0.00 42.15 3.06
3429 6249 2.598439 GCAGCGAAATCACATCGTCATC 60.598 50.000 0.00 0.00 42.15 2.92
3430 6250 2.604462 CAGCGAAATCACATCGTCATCA 59.396 45.455 0.00 0.00 42.15 3.07
3431 6251 2.604914 AGCGAAATCACATCGTCATCAC 59.395 45.455 0.00 0.00 42.15 3.06
3432 6252 2.348362 GCGAAATCACATCGTCATCACA 59.652 45.455 0.00 0.00 42.15 3.58
3433 6253 3.782250 GCGAAATCACATCGTCATCACAC 60.782 47.826 0.00 0.00 42.15 3.82
3434 6254 3.540167 CGAAATCACATCGTCATCACACG 60.540 47.826 0.00 0.00 41.36 4.49
3442 6262 3.579335 TCGTCATCACACGATTAACCA 57.421 42.857 0.00 0.00 43.79 3.67
3443 6263 3.247442 TCGTCATCACACGATTAACCAC 58.753 45.455 0.00 0.00 43.79 4.16
3444 6264 2.347452 CGTCATCACACGATTAACCACC 59.653 50.000 0.00 0.00 42.69 4.61
3445 6265 3.596214 GTCATCACACGATTAACCACCT 58.404 45.455 0.00 0.00 0.00 4.00
3446 6266 3.617263 GTCATCACACGATTAACCACCTC 59.383 47.826 0.00 0.00 0.00 3.85
3454 6274 4.513692 CACGATTAACCACCTCAGTTTGAA 59.486 41.667 0.00 0.00 0.00 2.69
3501 6321 1.123077 TCATCCGCAGCTTGATACCT 58.877 50.000 0.00 0.00 0.00 3.08
3502 6322 1.069204 TCATCCGCAGCTTGATACCTC 59.931 52.381 0.00 0.00 0.00 3.85
3535 6355 1.202452 ACTCTTGCCAAAAGTTGCTGC 60.202 47.619 0.00 0.00 0.00 5.25
3538 6358 2.692557 TCTTGCCAAAAGTTGCTGCTAA 59.307 40.909 0.00 0.00 0.00 3.09
3543 6363 3.871006 GCCAAAAGTTGCTGCTAAAAGTT 59.129 39.130 0.00 0.00 0.00 2.66
4876 7703 1.879575 TGGAGAAATCCAGGACCGAT 58.120 50.000 0.00 0.00 34.33 4.18
4918 7745 3.068873 GGGACGCAGAGAAGATAGTCAAT 59.931 47.826 0.00 0.00 0.00 2.57
4978 7805 5.248640 AGATTTCTGAAGCATTTCGAGGAA 58.751 37.500 0.00 0.00 36.04 3.36
5056 7883 1.587350 CGACGCAGATGCTCGTGAT 60.587 57.895 14.42 0.00 39.22 3.06
5102 7929 2.731572 CAGGCAGAACAAATCCATCCT 58.268 47.619 0.00 0.00 0.00 3.24
5103 7930 2.686915 CAGGCAGAACAAATCCATCCTC 59.313 50.000 0.00 0.00 0.00 3.71
5115 7942 4.815533 ATCCATCCTCTATCATTCACCG 57.184 45.455 0.00 0.00 0.00 4.94
5227 8054 4.987912 CCTTTAATTGTTTGGCGTTGATGT 59.012 37.500 0.00 0.00 0.00 3.06
5344 8173 6.644592 GGCATCAGAGATAAACATGTACTCTC 59.355 42.308 17.94 17.94 36.06 3.20
5438 8267 4.360951 TCCGTCCCAAAATAAGTGTCTT 57.639 40.909 0.00 0.00 0.00 3.01
5441 8270 6.478129 TCCGTCCCAAAATAAGTGTCTTAAT 58.522 36.000 0.00 0.00 0.00 1.40
5471 8300 3.372440 ACTTTAAGGGGCAATCTGAGG 57.628 47.619 0.00 0.00 0.00 3.86
5575 8404 8.372459 TCTCTTGTTTAGTGCCATACTTAAAGA 58.628 33.333 0.00 0.00 40.89 2.52
5576 8405 8.547967 TCTTGTTTAGTGCCATACTTAAAGAG 57.452 34.615 0.00 0.00 40.89 2.85
5577 8406 8.372459 TCTTGTTTAGTGCCATACTTAAAGAGA 58.628 33.333 0.00 0.00 40.89 3.10
5579 8408 6.594159 TGTTTAGTGCCATACTTAAAGAGAGC 59.406 38.462 0.00 0.00 40.89 4.09
5602 8432 7.528307 AGCGTATATCTCTAAAGTGTAATCCG 58.472 38.462 0.00 0.00 0.00 4.18
5633 8463 5.412526 TTCGTCAACACAAGTAATGGAAC 57.587 39.130 0.00 0.00 0.00 3.62
5659 8489 8.291032 CGAAACAAAATTACATACACCCTTGTA 58.709 33.333 0.00 0.00 42.53 2.41
5775 8610 8.830580 CACCGAAGAGTTGATGTGAAATATATT 58.169 33.333 0.00 0.00 0.00 1.28
5838 8673 7.690228 TCGTTTATTATCGAATTTCACAAGGG 58.310 34.615 0.00 0.00 33.13 3.95
5842 8677 8.740123 TTATTATCGAATTTCACAAGGGCTAA 57.260 30.769 0.00 0.00 0.00 3.09
5849 8684 4.864704 TTTCACAAGGGCTAAAACCATC 57.135 40.909 0.00 0.00 0.00 3.51
5850 8685 2.802719 TCACAAGGGCTAAAACCATCC 58.197 47.619 0.00 0.00 0.00 3.51
5857 8692 6.183361 ACAAGGGCTAAAACCATCCCATATAT 60.183 38.462 0.00 0.00 41.22 0.86
5858 8693 6.483888 AGGGCTAAAACCATCCCATATATT 57.516 37.500 0.00 0.00 41.22 1.28
5859 8694 6.256053 AGGGCTAAAACCATCCCATATATTG 58.744 40.000 0.00 0.00 41.22 1.90
5860 8695 6.046643 AGGGCTAAAACCATCCCATATATTGA 59.953 38.462 0.00 0.00 41.22 2.57
5861 8696 6.378280 GGGCTAAAACCATCCCATATATTGAG 59.622 42.308 0.00 0.00 38.62 3.02
5862 8697 7.175104 GGCTAAAACCATCCCATATATTGAGA 58.825 38.462 0.00 0.00 0.00 3.27
5863 8698 7.121315 GGCTAAAACCATCCCATATATTGAGAC 59.879 40.741 0.00 0.00 0.00 3.36
5864 8699 7.885399 GCTAAAACCATCCCATATATTGAGACT 59.115 37.037 0.00 0.00 0.00 3.24
5867 8702 8.742125 AAACCATCCCATATATTGAGACTAGA 57.258 34.615 0.00 0.00 0.00 2.43
5868 8703 7.726033 ACCATCCCATATATTGAGACTAGAC 57.274 40.000 0.00 0.00 0.00 2.59
5869 8704 6.670027 ACCATCCCATATATTGAGACTAGACC 59.330 42.308 0.00 0.00 0.00 3.85
5870 8705 6.900186 CCATCCCATATATTGAGACTAGACCT 59.100 42.308 0.00 0.00 0.00 3.85
5871 8706 7.147759 CCATCCCATATATTGAGACTAGACCTG 60.148 44.444 0.00 0.00 0.00 4.00
5872 8707 6.256819 TCCCATATATTGAGACTAGACCTGG 58.743 44.000 0.00 0.00 0.00 4.45
5873 8708 5.105146 CCCATATATTGAGACTAGACCTGGC 60.105 48.000 0.00 0.00 0.00 4.85
5874 8709 5.719085 CCATATATTGAGACTAGACCTGGCT 59.281 44.000 0.00 0.00 0.00 4.75
5875 8710 6.892456 CCATATATTGAGACTAGACCTGGCTA 59.108 42.308 0.00 0.00 0.00 3.93
5876 8711 7.068103 CCATATATTGAGACTAGACCTGGCTAG 59.932 44.444 17.89 17.89 42.77 3.42
5877 8712 4.528076 ATTGAGACTAGACCTGGCTAGA 57.472 45.455 23.20 8.28 40.20 2.43
5878 8713 4.317530 TTGAGACTAGACCTGGCTAGAA 57.682 45.455 23.20 10.47 40.20 2.10
5879 8714 3.892284 TGAGACTAGACCTGGCTAGAAG 58.108 50.000 23.20 7.95 40.20 2.85
5880 8715 2.621526 GAGACTAGACCTGGCTAGAAGC 59.378 54.545 23.20 14.94 40.20 3.86
5881 8716 2.024846 AGACTAGACCTGGCTAGAAGCA 60.025 50.000 23.20 0.00 44.75 3.91
5882 8717 2.761208 GACTAGACCTGGCTAGAAGCAA 59.239 50.000 23.20 0.00 44.75 3.91
5883 8718 3.173965 ACTAGACCTGGCTAGAAGCAAA 58.826 45.455 23.20 0.00 44.75 3.68
5884 8719 2.777832 AGACCTGGCTAGAAGCAAAG 57.222 50.000 0.00 0.00 44.75 2.77
5885 8720 1.280421 AGACCTGGCTAGAAGCAAAGG 59.720 52.381 14.84 14.84 46.28 3.11
5886 8721 0.322906 ACCTGGCTAGAAGCAAAGGC 60.323 55.000 15.86 0.00 45.35 4.35
5887 8722 1.372087 CCTGGCTAGAAGCAAAGGCG 61.372 60.000 0.00 0.00 44.75 5.52
5888 8723 1.986575 CTGGCTAGAAGCAAAGGCGC 61.987 60.000 0.00 0.00 44.75 6.53
5889 8724 3.100862 GGCTAGAAGCAAAGGCGCG 62.101 63.158 0.00 0.00 44.75 6.86
5896 8731 2.734346 GCAAAGGCGCGCAATTGT 60.734 55.556 33.62 15.78 0.00 2.71
5897 8732 2.309501 GCAAAGGCGCGCAATTGTT 61.310 52.632 33.62 19.31 0.00 2.83
5898 8733 1.006314 GCAAAGGCGCGCAATTGTTA 61.006 50.000 33.62 0.00 0.00 2.41
5899 8734 0.984109 CAAAGGCGCGCAATTGTTAG 59.016 50.000 34.42 13.31 0.00 2.34
5900 8735 0.109319 AAAGGCGCGCAATTGTTAGG 60.109 50.000 34.42 0.00 0.00 2.69
5901 8736 2.542211 AAGGCGCGCAATTGTTAGGC 62.542 55.000 34.42 11.21 0.00 3.93
5907 8742 2.542766 CGCAATTGTTAGGCGTTGAT 57.457 45.000 7.40 0.00 45.27 2.57
5908 8743 2.176369 CGCAATTGTTAGGCGTTGATG 58.824 47.619 7.40 0.00 45.27 3.07
5909 8744 2.529151 GCAATTGTTAGGCGTTGATGG 58.471 47.619 7.40 0.00 0.00 3.51
5910 8745 2.529151 CAATTGTTAGGCGTTGATGGC 58.471 47.619 0.00 0.00 0.00 4.40
5917 8752 2.747460 GCGTTGATGGCCTGAGCA 60.747 61.111 3.32 0.00 42.56 4.26
5918 8753 2.117156 GCGTTGATGGCCTGAGCAT 61.117 57.895 3.32 0.00 42.56 3.79
5919 8754 1.725665 CGTTGATGGCCTGAGCATG 59.274 57.895 3.32 0.00 42.56 4.06
5920 8755 1.721664 CGTTGATGGCCTGAGCATGG 61.722 60.000 3.32 0.00 42.56 3.66
5921 8756 1.076559 TTGATGGCCTGAGCATGGG 60.077 57.895 3.32 0.00 42.56 4.00
5935 8770 2.543641 GCATGGGCTCTATGTTTTTGC 58.456 47.619 0.00 0.00 36.96 3.68
5936 8771 2.739609 GCATGGGCTCTATGTTTTTGCC 60.740 50.000 0.00 0.00 42.56 4.52
5940 8775 3.510388 GGCTCTATGTTTTTGCCCTTC 57.490 47.619 0.00 0.00 37.81 3.46
5941 8776 2.825532 GGCTCTATGTTTTTGCCCTTCA 59.174 45.455 0.00 0.00 37.81 3.02
5942 8777 3.119352 GGCTCTATGTTTTTGCCCTTCAG 60.119 47.826 0.00 0.00 37.81 3.02
5943 8778 3.507622 GCTCTATGTTTTTGCCCTTCAGT 59.492 43.478 0.00 0.00 0.00 3.41
5944 8779 4.021981 GCTCTATGTTTTTGCCCTTCAGTT 60.022 41.667 0.00 0.00 0.00 3.16
5945 8780 5.703876 CTCTATGTTTTTGCCCTTCAGTTC 58.296 41.667 0.00 0.00 0.00 3.01
5946 8781 3.751479 ATGTTTTTGCCCTTCAGTTCC 57.249 42.857 0.00 0.00 0.00 3.62
5947 8782 2.461695 TGTTTTTGCCCTTCAGTTCCA 58.538 42.857 0.00 0.00 0.00 3.53
5948 8783 3.037549 TGTTTTTGCCCTTCAGTTCCAT 58.962 40.909 0.00 0.00 0.00 3.41
5949 8784 3.181467 TGTTTTTGCCCTTCAGTTCCATG 60.181 43.478 0.00 0.00 0.00 3.66
5950 8785 2.380064 TTTGCCCTTCAGTTCCATGT 57.620 45.000 0.00 0.00 0.00 3.21
5951 8786 2.380064 TTGCCCTTCAGTTCCATGTT 57.620 45.000 0.00 0.00 0.00 2.71
5952 8787 1.619654 TGCCCTTCAGTTCCATGTTG 58.380 50.000 0.00 0.00 0.00 3.33
5953 8788 1.144708 TGCCCTTCAGTTCCATGTTGA 59.855 47.619 0.00 0.00 0.00 3.18
5954 8789 2.225091 TGCCCTTCAGTTCCATGTTGAT 60.225 45.455 0.00 0.00 0.00 2.57
5955 8790 3.010027 TGCCCTTCAGTTCCATGTTGATA 59.990 43.478 0.00 0.00 0.00 2.15
5956 8791 3.629398 GCCCTTCAGTTCCATGTTGATAG 59.371 47.826 0.00 0.00 0.00 2.08
5957 8792 3.629398 CCCTTCAGTTCCATGTTGATAGC 59.371 47.826 0.00 0.00 0.00 2.97
5958 8793 3.629398 CCTTCAGTTCCATGTTGATAGCC 59.371 47.826 0.00 0.00 0.00 3.93
5959 8794 4.521146 CTTCAGTTCCATGTTGATAGCCT 58.479 43.478 0.00 0.00 0.00 4.58
5960 8795 4.574674 TCAGTTCCATGTTGATAGCCTT 57.425 40.909 0.00 0.00 0.00 4.35
5961 8796 4.922206 TCAGTTCCATGTTGATAGCCTTT 58.078 39.130 0.00 0.00 0.00 3.11
5962 8797 6.061022 TCAGTTCCATGTTGATAGCCTTTA 57.939 37.500 0.00 0.00 0.00 1.85
5963 8798 6.115446 TCAGTTCCATGTTGATAGCCTTTAG 58.885 40.000 0.00 0.00 0.00 1.85
5964 8799 5.882557 CAGTTCCATGTTGATAGCCTTTAGT 59.117 40.000 0.00 0.00 0.00 2.24
5965 8800 6.375455 CAGTTCCATGTTGATAGCCTTTAGTT 59.625 38.462 0.00 0.00 0.00 2.24
5966 8801 6.599638 AGTTCCATGTTGATAGCCTTTAGTTC 59.400 38.462 0.00 0.00 0.00 3.01
5967 8802 5.437060 TCCATGTTGATAGCCTTTAGTTCC 58.563 41.667 0.00 0.00 0.00 3.62
5968 8803 4.273480 CCATGTTGATAGCCTTTAGTTCCG 59.727 45.833 0.00 0.00 0.00 4.30
5969 8804 3.267483 TGTTGATAGCCTTTAGTTCCGC 58.733 45.455 0.00 0.00 0.00 5.54
5970 8805 3.055385 TGTTGATAGCCTTTAGTTCCGCT 60.055 43.478 0.00 0.00 35.34 5.52
5971 8806 3.906720 TGATAGCCTTTAGTTCCGCTT 57.093 42.857 0.00 0.00 32.76 4.68
5972 8807 4.216411 TGATAGCCTTTAGTTCCGCTTT 57.784 40.909 0.00 0.00 32.76 3.51
5973 8808 5.347620 TGATAGCCTTTAGTTCCGCTTTA 57.652 39.130 0.00 0.00 32.76 1.85
5974 8809 5.357257 TGATAGCCTTTAGTTCCGCTTTAG 58.643 41.667 0.00 0.00 32.76 1.85
5975 8810 3.697619 AGCCTTTAGTTCCGCTTTAGT 57.302 42.857 0.00 0.00 0.00 2.24
5976 8811 4.017177 AGCCTTTAGTTCCGCTTTAGTT 57.983 40.909 0.00 0.00 0.00 2.24
5977 8812 4.395625 AGCCTTTAGTTCCGCTTTAGTTT 58.604 39.130 0.00 0.00 0.00 2.66
5978 8813 4.454847 AGCCTTTAGTTCCGCTTTAGTTTC 59.545 41.667 0.00 0.00 0.00 2.78
5979 8814 4.214758 GCCTTTAGTTCCGCTTTAGTTTCA 59.785 41.667 0.00 0.00 0.00 2.69
5980 8815 5.106277 GCCTTTAGTTCCGCTTTAGTTTCAT 60.106 40.000 0.00 0.00 0.00 2.57
5981 8816 6.314784 CCTTTAGTTCCGCTTTAGTTTCATG 58.685 40.000 0.00 0.00 0.00 3.07
5982 8817 3.831715 AGTTCCGCTTTAGTTTCATGC 57.168 42.857 0.00 0.00 0.00 4.06
5983 8818 2.488153 AGTTCCGCTTTAGTTTCATGCC 59.512 45.455 0.00 0.00 0.00 4.40
5984 8819 2.192664 TCCGCTTTAGTTTCATGCCA 57.807 45.000 0.00 0.00 0.00 4.92
5985 8820 2.722094 TCCGCTTTAGTTTCATGCCAT 58.278 42.857 0.00 0.00 0.00 4.40
5986 8821 3.879998 TCCGCTTTAGTTTCATGCCATA 58.120 40.909 0.00 0.00 0.00 2.74
5987 8822 4.460263 TCCGCTTTAGTTTCATGCCATAT 58.540 39.130 0.00 0.00 0.00 1.78
5988 8823 5.616270 TCCGCTTTAGTTTCATGCCATATA 58.384 37.500 0.00 0.00 0.00 0.86
5989 8824 6.237901 TCCGCTTTAGTTTCATGCCATATAT 58.762 36.000 0.00 0.00 0.00 0.86
5990 8825 7.390823 TCCGCTTTAGTTTCATGCCATATATA 58.609 34.615 0.00 0.00 0.00 0.86
5991 8826 7.549134 TCCGCTTTAGTTTCATGCCATATATAG 59.451 37.037 0.00 0.00 0.00 1.31
5992 8827 7.182761 CGCTTTAGTTTCATGCCATATATAGC 58.817 38.462 0.00 0.00 0.00 2.97
5993 8828 7.475840 GCTTTAGTTTCATGCCATATATAGCC 58.524 38.462 0.47 0.00 0.00 3.93
5994 8829 7.337942 GCTTTAGTTTCATGCCATATATAGCCT 59.662 37.037 0.47 0.00 0.00 4.58
5995 8830 9.236006 CTTTAGTTTCATGCCATATATAGCCTT 57.764 33.333 0.47 0.00 0.00 4.35
5996 8831 8.565896 TTAGTTTCATGCCATATATAGCCTTG 57.434 34.615 0.47 0.00 0.00 3.61
5997 8832 6.546484 AGTTTCATGCCATATATAGCCTTGT 58.454 36.000 0.47 0.00 0.00 3.16
5998 8833 6.656693 AGTTTCATGCCATATATAGCCTTGTC 59.343 38.462 0.47 0.00 0.00 3.18
5999 8834 5.102953 TCATGCCATATATAGCCTTGTCC 57.897 43.478 0.47 0.00 0.00 4.02
6000 8835 4.784838 TCATGCCATATATAGCCTTGTCCT 59.215 41.667 0.47 0.00 0.00 3.85
6001 8836 5.251468 TCATGCCATATATAGCCTTGTCCTT 59.749 40.000 0.47 0.00 0.00 3.36
6002 8837 4.910195 TGCCATATATAGCCTTGTCCTTG 58.090 43.478 0.47 0.00 0.00 3.61
6003 8838 4.350816 TGCCATATATAGCCTTGTCCTTGT 59.649 41.667 0.47 0.00 0.00 3.16
6004 8839 4.697352 GCCATATATAGCCTTGTCCTTGTG 59.303 45.833 0.00 0.00 0.00 3.33
6005 8840 5.248640 CCATATATAGCCTTGTCCTTGTGG 58.751 45.833 0.00 0.00 0.00 4.17
6006 8841 5.013079 CCATATATAGCCTTGTCCTTGTGGA 59.987 44.000 0.00 0.00 40.69 4.02
6007 8842 6.465751 CCATATATAGCCTTGTCCTTGTGGAA 60.466 42.308 0.00 0.00 45.18 3.53
6008 8843 5.653255 ATATAGCCTTGTCCTTGTGGAAT 57.347 39.130 0.00 0.00 45.18 3.01
6009 8844 2.206576 AGCCTTGTCCTTGTGGAATC 57.793 50.000 0.00 0.00 45.18 2.52
6010 8845 1.425066 AGCCTTGTCCTTGTGGAATCA 59.575 47.619 0.00 0.00 45.18 2.57
6011 8846 1.815003 GCCTTGTCCTTGTGGAATCAG 59.185 52.381 0.00 0.00 45.18 2.90
6012 8847 2.553028 GCCTTGTCCTTGTGGAATCAGA 60.553 50.000 0.00 0.00 45.18 3.27
6013 8848 3.341823 CCTTGTCCTTGTGGAATCAGAG 58.658 50.000 0.00 0.00 45.18 3.35
6014 8849 3.008375 CCTTGTCCTTGTGGAATCAGAGA 59.992 47.826 0.00 0.00 45.18 3.10
6015 8850 3.969287 TGTCCTTGTGGAATCAGAGAG 57.031 47.619 0.00 0.00 45.18 3.20
6016 8851 3.510459 TGTCCTTGTGGAATCAGAGAGA 58.490 45.455 0.00 0.00 45.18 3.10
6017 8852 3.513119 TGTCCTTGTGGAATCAGAGAGAG 59.487 47.826 0.00 0.00 45.18 3.20
6018 8853 3.766591 GTCCTTGTGGAATCAGAGAGAGA 59.233 47.826 0.00 0.00 45.18 3.10
6019 8854 4.022603 TCCTTGTGGAATCAGAGAGAGAG 58.977 47.826 0.00 0.00 39.87 3.20
6020 8855 4.022603 CCTTGTGGAATCAGAGAGAGAGA 58.977 47.826 0.00 0.00 34.57 3.10
6021 8856 4.098349 CCTTGTGGAATCAGAGAGAGAGAG 59.902 50.000 0.00 0.00 34.57 3.20
6022 8857 4.582973 TGTGGAATCAGAGAGAGAGAGA 57.417 45.455 0.00 0.00 0.00 3.10
6023 8858 4.525996 TGTGGAATCAGAGAGAGAGAGAG 58.474 47.826 0.00 0.00 0.00 3.20
6024 8859 4.227073 TGTGGAATCAGAGAGAGAGAGAGA 59.773 45.833 0.00 0.00 0.00 3.10
6025 8860 4.818546 GTGGAATCAGAGAGAGAGAGAGAG 59.181 50.000 0.00 0.00 0.00 3.20
6026 8861 4.721274 TGGAATCAGAGAGAGAGAGAGAGA 59.279 45.833 0.00 0.00 0.00 3.10
6027 8862 5.163269 TGGAATCAGAGAGAGAGAGAGAGAG 60.163 48.000 0.00 0.00 0.00 3.20
6028 8863 5.070981 GGAATCAGAGAGAGAGAGAGAGAGA 59.929 48.000 0.00 0.00 0.00 3.10
6029 8864 5.804944 ATCAGAGAGAGAGAGAGAGAGAG 57.195 47.826 0.00 0.00 0.00 3.20
6030 8865 4.871822 TCAGAGAGAGAGAGAGAGAGAGA 58.128 47.826 0.00 0.00 0.00 3.10
6031 8866 4.892345 TCAGAGAGAGAGAGAGAGAGAGAG 59.108 50.000 0.00 0.00 0.00 3.20
6032 8867 4.892345 CAGAGAGAGAGAGAGAGAGAGAGA 59.108 50.000 0.00 0.00 0.00 3.10
6033 8868 5.009911 CAGAGAGAGAGAGAGAGAGAGAGAG 59.990 52.000 0.00 0.00 0.00 3.20
6034 8869 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
6035 8870 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
6036 8871 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
6037 8872 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
6038 8873 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
6039 8874 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
6040 8875 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
6041 8876 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
6042 8877 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
6043 8878 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
6044 8879 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
6045 8880 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
6046 8881 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
6047 8882 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
6048 8883 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
6049 8884 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
6050 8885 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
6051 8886 5.714863 AGAGAGAGAGAGAGAGAGAGAGAT 58.285 45.833 0.00 0.00 0.00 2.75
6052 8887 6.857848 AGAGAGAGAGAGAGAGAGAGAGATA 58.142 44.000 0.00 0.00 0.00 1.98
6053 8888 7.301420 AGAGAGAGAGAGAGAGAGAGAGATAA 58.699 42.308 0.00 0.00 0.00 1.75
6054 8889 7.786943 AGAGAGAGAGAGAGAGAGAGAGATAAA 59.213 40.741 0.00 0.00 0.00 1.40
6055 8890 7.731054 AGAGAGAGAGAGAGAGAGAGATAAAC 58.269 42.308 0.00 0.00 0.00 2.01
6056 8891 7.345653 AGAGAGAGAGAGAGAGAGAGATAAACA 59.654 40.741 0.00 0.00 0.00 2.83
6057 8892 8.038862 AGAGAGAGAGAGAGAGAGATAAACAT 57.961 38.462 0.00 0.00 0.00 2.71
6058 8893 7.935755 AGAGAGAGAGAGAGAGAGATAAACATG 59.064 40.741 0.00 0.00 0.00 3.21
6059 8894 7.577303 AGAGAGAGAGAGAGAGATAAACATGT 58.423 38.462 0.00 0.00 0.00 3.21
6060 8895 8.713971 AGAGAGAGAGAGAGAGATAAACATGTA 58.286 37.037 0.00 0.00 0.00 2.29
6061 8896 9.337396 GAGAGAGAGAGAGAGATAAACATGTAA 57.663 37.037 0.00 0.00 0.00 2.41
6062 8897 9.120538 AGAGAGAGAGAGAGATAAACATGTAAC 57.879 37.037 0.00 0.00 0.00 2.50
6063 8898 9.120538 GAGAGAGAGAGAGATAAACATGTAACT 57.879 37.037 0.00 0.00 0.00 2.24
6066 8901 9.127277 AGAGAGAGAGATAAACATGTAACTACC 57.873 37.037 0.00 0.00 0.00 3.18
6067 8902 8.824756 AGAGAGAGATAAACATGTAACTACCA 57.175 34.615 0.00 0.00 0.00 3.25
6068 8903 8.908903 AGAGAGAGATAAACATGTAACTACCAG 58.091 37.037 0.00 0.00 0.00 4.00
6069 8904 7.493367 AGAGAGATAAACATGTAACTACCAGC 58.507 38.462 0.00 0.00 0.00 4.85
6070 8905 7.343316 AGAGAGATAAACATGTAACTACCAGCT 59.657 37.037 0.00 0.00 0.00 4.24
6071 8906 7.268586 AGAGATAAACATGTAACTACCAGCTG 58.731 38.462 6.78 6.78 0.00 4.24
6072 8907 6.947464 AGATAAACATGTAACTACCAGCTGT 58.053 36.000 13.81 3.45 0.00 4.40
6073 8908 6.818644 AGATAAACATGTAACTACCAGCTGTG 59.181 38.462 13.81 6.81 0.00 3.66
6101 8936 2.348411 CCATTAACCTGGTGGGCTAG 57.652 55.000 0.00 0.00 39.10 3.42
6102 8937 1.843851 CCATTAACCTGGTGGGCTAGA 59.156 52.381 0.00 0.00 39.10 2.43
6103 8938 2.443255 CCATTAACCTGGTGGGCTAGAT 59.557 50.000 0.00 0.00 39.10 1.98
6104 8939 3.480470 CATTAACCTGGTGGGCTAGATG 58.520 50.000 0.00 0.00 39.10 2.90
6105 8940 2.561209 TAACCTGGTGGGCTAGATGA 57.439 50.000 0.00 0.00 39.10 2.92
6106 8941 1.207791 AACCTGGTGGGCTAGATGAG 58.792 55.000 0.00 0.00 39.10 2.90
6107 8942 0.339859 ACCTGGTGGGCTAGATGAGA 59.660 55.000 0.00 0.00 39.10 3.27
6108 8943 1.061812 ACCTGGTGGGCTAGATGAGAT 60.062 52.381 0.00 0.00 39.10 2.75
6109 8944 1.347050 CCTGGTGGGCTAGATGAGATG 59.653 57.143 0.00 0.00 0.00 2.90
6110 8945 1.347050 CTGGTGGGCTAGATGAGATGG 59.653 57.143 0.00 0.00 0.00 3.51
6111 8946 0.036022 GGTGGGCTAGATGAGATGGC 59.964 60.000 0.00 0.00 0.00 4.40
6112 8947 0.761187 GTGGGCTAGATGAGATGGCA 59.239 55.000 0.00 0.00 0.00 4.92
6113 8948 1.141657 GTGGGCTAGATGAGATGGCAA 59.858 52.381 0.00 0.00 0.00 4.52
6114 8949 2.060275 TGGGCTAGATGAGATGGCAAT 58.940 47.619 0.00 0.00 0.00 3.56
6115 8950 2.039480 TGGGCTAGATGAGATGGCAATC 59.961 50.000 0.00 0.00 0.00 2.67
6116 8951 2.039480 GGGCTAGATGAGATGGCAATCA 59.961 50.000 3.34 8.04 35.03 2.57
6117 8952 3.308259 GGGCTAGATGAGATGGCAATCAT 60.308 47.826 15.90 15.90 38.84 2.45
6118 8953 4.333690 GGCTAGATGAGATGGCAATCATT 58.666 43.478 16.73 10.82 36.30 2.57
6119 8954 5.494724 GGCTAGATGAGATGGCAATCATTA 58.505 41.667 16.73 11.22 36.30 1.90
6120 8955 5.942236 GGCTAGATGAGATGGCAATCATTAA 59.058 40.000 16.73 9.32 36.30 1.40
6121 8956 6.602406 GGCTAGATGAGATGGCAATCATTAAT 59.398 38.462 16.73 10.43 36.30 1.40
6122 8957 7.122353 GGCTAGATGAGATGGCAATCATTAATT 59.878 37.037 16.73 8.37 36.30 1.40
6123 8958 8.521176 GCTAGATGAGATGGCAATCATTAATTT 58.479 33.333 16.73 6.61 36.30 1.82
6126 8961 9.542462 AGATGAGATGGCAATCATTAATTTTTG 57.458 29.630 16.73 3.70 36.30 2.44
6127 8962 9.537192 GATGAGATGGCAATCATTAATTTTTGA 57.463 29.630 16.73 0.00 36.30 2.69
6129 8964 9.320352 TGAGATGGCAATCATTAATTTTTGATG 57.680 29.630 3.34 0.00 35.97 3.07
6130 8965 9.321562 GAGATGGCAATCATTAATTTTTGATGT 57.678 29.630 3.34 0.00 35.97 3.06
6131 8966 9.321562 AGATGGCAATCATTAATTTTTGATGTC 57.678 29.630 3.34 5.35 35.97 3.06
6132 8967 7.846644 TGGCAATCATTAATTTTTGATGTCC 57.153 32.000 10.08 8.07 33.01 4.02
6133 8968 7.622713 TGGCAATCATTAATTTTTGATGTCCT 58.377 30.769 10.08 0.00 33.01 3.85
6134 8969 8.756927 TGGCAATCATTAATTTTTGATGTCCTA 58.243 29.630 10.08 6.24 33.01 2.94
6135 8970 9.252962 GGCAATCATTAATTTTTGATGTCCTAG 57.747 33.333 10.08 0.00 33.01 3.02
6136 8971 9.807649 GCAATCATTAATTTTTGATGTCCTAGT 57.192 29.630 10.08 0.00 33.01 2.57
6148 8983 9.871238 TTTTGATGTCCTAGTTATTGACTACTC 57.129 33.333 0.00 0.00 39.86 2.59
6149 8984 7.584122 TGATGTCCTAGTTATTGACTACTCC 57.416 40.000 0.00 0.00 39.86 3.85
6150 8985 6.550108 TGATGTCCTAGTTATTGACTACTCCC 59.450 42.308 0.00 0.00 39.86 4.30
6151 8986 6.088541 TGTCCTAGTTATTGACTACTCCCT 57.911 41.667 0.00 0.00 39.86 4.20
6152 8987 6.127793 TGTCCTAGTTATTGACTACTCCCTC 58.872 44.000 0.00 0.00 39.86 4.30
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
62 63 1.219664 CCCATGCATTTGCCACCAG 59.780 57.895 0.00 0.00 41.18 4.00
121 122 2.091885 AGTTTTCAAGCCTGGACCTCAA 60.092 45.455 0.00 0.00 0.00 3.02
131 132 6.127869 GGATTCTCCTCTTAAGTTTTCAAGCC 60.128 42.308 1.63 0.74 32.53 4.35
161 162 2.027625 GTTCTCGACGGGCCACAAG 61.028 63.158 4.39 0.00 0.00 3.16
216 220 1.118356 AGCTAATGCCTCTCCCCTCG 61.118 60.000 0.00 0.00 40.80 4.63
217 221 0.684535 GAGCTAATGCCTCTCCCCTC 59.315 60.000 0.00 0.00 40.80 4.30
267 273 7.886629 AATATGCCATATTGCGATATCCTTT 57.113 32.000 9.11 0.00 34.32 3.11
285 291 2.121723 TGCACGCGCATGAAAATATGC 61.122 47.619 8.08 4.84 45.36 3.14
331 337 1.627834 CCTCCTGAGCCAGAGACTTTT 59.372 52.381 4.00 0.00 32.44 2.27
414 423 4.819630 GTCATCTTGGGCGGTGAAAATATA 59.180 41.667 0.00 0.00 0.00 0.86
447 456 2.248280 ATTGCACAAGTGACCACGTA 57.752 45.000 4.04 0.00 36.20 3.57
449 458 1.333308 TCAATTGCACAAGTGACCACG 59.667 47.619 9.27 0.00 40.00 4.94
514 523 7.011763 GTGCATTCTAAATCTCAGCATCAGTTA 59.988 37.037 0.00 0.00 32.75 2.24
531 540 3.653344 GCATCATAGACGGTGCATTCTA 58.347 45.455 0.00 0.00 37.52 2.10
541 550 1.835483 GCTTGGGCGCATCATAGACG 61.835 60.000 10.83 0.00 0.00 4.18
553 562 2.363406 ATGAGGGCTTGCTTGGGC 60.363 61.111 0.00 0.00 39.26 5.36
567 576 3.938963 GCTATGAAACCTTCGGTTCATGA 59.061 43.478 12.51 0.00 46.20 3.07
591 600 8.758715 GTCATAAAATGCTGATTTATTGAAGCC 58.241 33.333 0.00 0.00 32.15 4.35
601 610 6.823689 ACCTTACTCGTCATAAAATGCTGATT 59.176 34.615 0.00 0.00 0.00 2.57
602 611 6.349300 ACCTTACTCGTCATAAAATGCTGAT 58.651 36.000 0.00 0.00 0.00 2.90
604 613 7.358435 CGATACCTTACTCGTCATAAAATGCTG 60.358 40.741 0.00 0.00 0.00 4.41
606 615 6.615839 GCGATACCTTACTCGTCATAAAATGC 60.616 42.308 0.00 0.00 37.23 3.56
607 616 6.128902 GGCGATACCTTACTCGTCATAAAATG 60.129 42.308 0.00 0.00 39.22 2.32
608 617 5.924825 GGCGATACCTTACTCGTCATAAAAT 59.075 40.000 0.00 0.00 39.22 1.82
619 672 1.129058 CAAGGGGGCGATACCTTACT 58.871 55.000 4.90 0.00 44.98 2.24
665 761 7.606858 ATGAATCCGCTGAACATATAATCAG 57.393 36.000 10.98 10.98 44.66 2.90
699 795 2.027460 CACCGCCACTTTGCAACC 59.973 61.111 0.00 0.00 0.00 3.77
725 821 1.882623 CTGGTTGAACTTCCCTGCTTC 59.117 52.381 0.00 0.00 0.00 3.86
729 825 3.009033 TCATACCTGGTTGAACTTCCCTG 59.991 47.826 3.84 0.00 0.00 4.45
741 837 8.379428 TCATGTATAATAGCATCATACCTGGT 57.621 34.615 4.05 4.05 0.00 4.00
803 900 6.088824 GCGAGATTTCAAACTCATGAACAAT 58.911 36.000 0.00 0.00 38.95 2.71
837 934 5.996644 TCCCATATTTTACGAGGTTGTCAT 58.003 37.500 0.00 0.00 0.00 3.06
859 956 4.024556 CCTAATCAAGCATGACGGTCAATC 60.025 45.833 15.72 9.63 38.69 2.67
1291 3472 2.577593 GCGTCTGTACAGGGGGAC 59.422 66.667 22.48 12.33 0.00 4.46
1483 3664 1.379843 CATTGGAAACGGGAGGGGG 60.380 63.158 0.00 0.00 0.00 5.40
1484 3665 0.965363 CACATTGGAAACGGGAGGGG 60.965 60.000 0.00 0.00 0.00 4.79
1485 3666 0.965363 CCACATTGGAAACGGGAGGG 60.965 60.000 0.00 0.00 40.96 4.30
1524 3927 2.060383 TCGCCTGTCCTGGATCCAG 61.060 63.158 31.69 31.69 43.26 3.86
1658 4129 0.819259 TGTCAAGGTGGCAGCTGAAC 60.819 55.000 21.35 20.04 0.00 3.18
1726 4334 3.955471 AGCATTTTAAGGTAGCAGCTGA 58.045 40.909 20.43 0.00 0.00 4.26
1759 4367 5.466728 TGAACAGCACTTGAGCTAAAAGTAG 59.533 40.000 12.62 9.14 44.54 2.57
1762 4370 4.818534 TGAACAGCACTTGAGCTAAAAG 57.181 40.909 7.01 7.01 44.54 2.27
1966 4624 0.104120 GGGGTCAAGTGCCACAAAAC 59.896 55.000 0.00 0.00 0.00 2.43
1967 4625 1.045911 GGGGGTCAAGTGCCACAAAA 61.046 55.000 0.00 0.00 0.00 2.44
2030 4692 3.639094 CCAAGATCATCGTCTACCTTCCT 59.361 47.826 0.00 0.00 0.00 3.36
2126 4788 2.968574 CAGAGCCTCCTAGATTAAGCCA 59.031 50.000 0.00 0.00 0.00 4.75
2174 4836 6.876257 GTCCATATAATTGTAGGGCAAGAGAG 59.124 42.308 7.94 0.00 40.86 3.20
2208 4871 8.525290 TTAGTGAAGGGTGTAGGTACTAATAC 57.475 38.462 0.00 0.00 45.48 1.89
2211 4874 9.193806 CTTATTAGTGAAGGGTGTAGGTACTAA 57.806 37.037 0.00 0.00 45.48 2.24
2547 5211 3.197766 AGCTGGGTATCGAATCAACAAGA 59.802 43.478 0.00 0.00 0.00 3.02
2611 5277 1.757306 CCTGTTGCTCTCCACCAGT 59.243 57.895 0.00 0.00 32.53 4.00
2618 5284 2.614001 AGGATCCCCTGTTGCTCTC 58.386 57.895 8.55 0.00 42.42 3.20
2642 5309 2.431057 AGAAGGTAAAGACGCCGATCAT 59.569 45.455 0.00 0.00 0.00 2.45
2662 5329 5.262588 ACAAAGCAAGGTACCAAAGAAAG 57.737 39.130 15.94 1.44 0.00 2.62
2693 5360 3.637769 AGCCAACAACTTACAGGGAAAA 58.362 40.909 0.00 0.00 0.00 2.29
2694 5361 3.306472 AGCCAACAACTTACAGGGAAA 57.694 42.857 0.00 0.00 0.00 3.13
2720 5387 7.553760 ACTTAAAAGTTCGTCTCCCAAACTTAA 59.446 33.333 0.63 0.00 41.17 1.85
2721 5388 7.049754 ACTTAAAAGTTCGTCTCCCAAACTTA 58.950 34.615 0.63 0.00 41.17 2.24
2723 5390 5.434408 ACTTAAAAGTTCGTCTCCCAAACT 58.566 37.500 0.00 0.00 35.21 2.66
2724 5391 5.746307 ACTTAAAAGTTCGTCTCCCAAAC 57.254 39.130 0.00 0.00 35.21 2.93
2725 5392 5.449451 GCAACTTAAAAGTTCGTCTCCCAAA 60.449 40.000 5.13 0.00 45.65 3.28
2756 5423 4.081972 TCTGCAACCAAAGCTACAAAAACA 60.082 37.500 0.00 0.00 0.00 2.83
2758 5425 4.681744 CTCTGCAACCAAAGCTACAAAAA 58.318 39.130 0.00 0.00 0.00 1.94
2762 5429 1.238439 GCTCTGCAACCAAAGCTACA 58.762 50.000 0.00 0.00 0.00 2.74
2763 5430 0.523519 GGCTCTGCAACCAAAGCTAC 59.476 55.000 0.00 0.00 35.12 3.58
2764 5431 0.401738 AGGCTCTGCAACCAAAGCTA 59.598 50.000 3.18 0.00 35.12 3.32
2767 5434 0.316204 CCAAGGCTCTGCAACCAAAG 59.684 55.000 3.18 0.00 0.00 2.77
2768 5435 0.396974 ACCAAGGCTCTGCAACCAAA 60.397 50.000 3.18 0.00 0.00 3.28
2769 5436 0.396974 AACCAAGGCTCTGCAACCAA 60.397 50.000 3.18 0.00 0.00 3.67
2770 5437 0.396974 AAACCAAGGCTCTGCAACCA 60.397 50.000 3.18 0.00 0.00 3.67
2771 5438 0.315251 GAAACCAAGGCTCTGCAACC 59.685 55.000 0.00 0.00 0.00 3.77
2772 5439 1.032014 TGAAACCAAGGCTCTGCAAC 58.968 50.000 0.00 0.00 0.00 4.17
2773 5440 1.682854 CTTGAAACCAAGGCTCTGCAA 59.317 47.619 0.00 0.00 37.86 4.08
2774 5441 1.321474 CTTGAAACCAAGGCTCTGCA 58.679 50.000 0.00 0.00 37.86 4.41
2775 5442 0.038801 GCTTGAAACCAAGGCTCTGC 60.039 55.000 7.21 0.00 40.94 4.26
2776 5443 1.268899 CAGCTTGAAACCAAGGCTCTG 59.731 52.381 7.21 3.09 40.94 3.35
2777 5444 1.613836 CAGCTTGAAACCAAGGCTCT 58.386 50.000 7.21 0.00 40.94 4.09
2778 5445 0.600057 CCAGCTTGAAACCAAGGCTC 59.400 55.000 7.21 0.00 40.94 4.70
2779 5446 0.185901 TCCAGCTTGAAACCAAGGCT 59.814 50.000 7.21 2.82 40.94 4.58
2780 5447 0.600057 CTCCAGCTTGAAACCAAGGC 59.400 55.000 7.21 0.83 40.94 4.35
2781 5448 1.251251 CCTCCAGCTTGAAACCAAGG 58.749 55.000 7.21 0.00 40.94 3.61
2782 5449 0.600057 GCCTCCAGCTTGAAACCAAG 59.400 55.000 0.00 0.00 42.90 3.61
2806 5473 5.485708 AGGGATACATTAGAGATGGCCTTAC 59.514 44.000 3.32 0.00 39.74 2.34
2809 5476 4.100373 GAGGGATACATTAGAGATGGCCT 58.900 47.826 3.32 0.00 39.74 5.19
2812 5479 5.336945 TCCAGAGGGATACATTAGAGATGG 58.663 45.833 0.00 0.00 38.64 3.51
2861 5528 0.811281 CCGCTCCCAAACTCATTTCC 59.189 55.000 0.00 0.00 0.00 3.13
3015 5815 0.608640 ACCAAGGAGACCGTGCTAAG 59.391 55.000 0.00 0.00 31.81 2.18
3022 5822 1.204941 CAAGGAGTACCAAGGAGACCG 59.795 57.143 0.00 0.00 38.94 4.79
3033 5833 0.898320 TGGCTCTGCTCAAGGAGTAC 59.102 55.000 0.00 0.00 34.87 2.73
3057 5857 3.382546 GTGCCAAGATACATGATGCCTTT 59.617 43.478 0.00 0.00 0.00 3.11
3059 5859 2.092267 TGTGCCAAGATACATGATGCCT 60.092 45.455 0.00 0.00 0.00 4.75
3090 5890 4.452114 TGATTCAGTGGTCTGTCATTTTCG 59.548 41.667 0.00 0.00 41.91 3.46
3102 5902 2.104111 TGGAACGAACTGATTCAGTGGT 59.896 45.455 19.65 16.76 44.62 4.16
3177 5978 4.354162 GCGGGTTTGGTAGGGGCA 62.354 66.667 0.00 0.00 0.00 5.36
3183 5984 1.919308 TAGGCCAGCGGGTTTGGTA 60.919 57.895 5.01 0.00 38.02 3.25
3218 6019 3.330701 ACCAATATGACCAGAACCACTGT 59.669 43.478 0.00 0.00 44.40 3.55
3331 6132 1.604604 TGAACGAGGAAAGGCAAAGG 58.395 50.000 0.00 0.00 0.00 3.11
3341 6142 6.310467 CGACTCTTTTATTCAATGAACGAGGA 59.690 38.462 11.62 0.00 31.28 3.71
3342 6143 6.455646 CCGACTCTTTTATTCAATGAACGAGG 60.456 42.308 11.62 0.00 31.28 4.63
3345 6146 6.015504 CACCGACTCTTTTATTCAATGAACG 58.984 40.000 0.00 0.00 0.00 3.95
3349 6150 5.880054 ACCACCGACTCTTTTATTCAATG 57.120 39.130 0.00 0.00 0.00 2.82
3351 6152 5.237779 GTGAACCACCGACTCTTTTATTCAA 59.762 40.000 0.00 0.00 0.00 2.69
3353 6154 4.995487 AGTGAACCACCGACTCTTTTATTC 59.005 41.667 0.00 0.00 34.49 1.75
3354 6155 4.969484 AGTGAACCACCGACTCTTTTATT 58.031 39.130 0.00 0.00 34.49 1.40
3355 6156 4.618920 AGTGAACCACCGACTCTTTTAT 57.381 40.909 0.00 0.00 34.49 1.40
3357 6158 3.277142 AAGTGAACCACCGACTCTTTT 57.723 42.857 0.00 0.00 34.49 2.27
3358 6159 3.802675 GCTAAGTGAACCACCGACTCTTT 60.803 47.826 0.00 0.00 34.49 2.52
3401 6221 2.076100 TGTGATTTCGCTGCCTAACTG 58.924 47.619 0.00 0.00 0.00 3.16
3424 6244 3.596214 AGGTGGTTAATCGTGTGATGAC 58.404 45.455 0.00 0.00 34.24 3.06
3425 6245 3.259625 TGAGGTGGTTAATCGTGTGATGA 59.740 43.478 0.00 0.00 34.24 2.92
3426 6246 3.595173 TGAGGTGGTTAATCGTGTGATG 58.405 45.455 0.00 0.00 34.24 3.07
3427 6247 3.260884 ACTGAGGTGGTTAATCGTGTGAT 59.739 43.478 0.00 0.00 35.98 3.06
3428 6248 2.631062 ACTGAGGTGGTTAATCGTGTGA 59.369 45.455 0.00 0.00 0.00 3.58
3429 6249 3.040147 ACTGAGGTGGTTAATCGTGTG 57.960 47.619 0.00 0.00 0.00 3.82
3430 6250 3.764237 AACTGAGGTGGTTAATCGTGT 57.236 42.857 0.00 0.00 0.00 4.49
3431 6251 4.062293 TCAAACTGAGGTGGTTAATCGTG 58.938 43.478 0.00 0.00 0.00 4.35
3432 6252 4.345859 TCAAACTGAGGTGGTTAATCGT 57.654 40.909 0.00 0.00 0.00 3.73
3433 6253 5.181245 ACATTCAAACTGAGGTGGTTAATCG 59.819 40.000 0.00 0.00 0.00 3.34
3434 6254 6.349363 GGACATTCAAACTGAGGTGGTTAATC 60.349 42.308 0.00 0.00 0.00 1.75
3435 6255 5.476945 GGACATTCAAACTGAGGTGGTTAAT 59.523 40.000 0.00 0.00 0.00 1.40
3436 6256 4.825085 GGACATTCAAACTGAGGTGGTTAA 59.175 41.667 0.00 0.00 0.00 2.01
3437 6257 4.141367 TGGACATTCAAACTGAGGTGGTTA 60.141 41.667 0.00 0.00 0.00 2.85
3438 6258 3.222603 GGACATTCAAACTGAGGTGGTT 58.777 45.455 0.00 0.00 0.00 3.67
3439 6259 2.174639 TGGACATTCAAACTGAGGTGGT 59.825 45.455 0.00 0.00 0.00 4.16
3440 6260 2.862541 TGGACATTCAAACTGAGGTGG 58.137 47.619 0.00 0.00 0.00 4.61
3441 6261 3.885297 AGTTGGACATTCAAACTGAGGTG 59.115 43.478 0.00 0.00 0.00 4.00
3442 6262 3.885297 CAGTTGGACATTCAAACTGAGGT 59.115 43.478 15.66 0.00 32.65 3.85
3443 6263 3.885297 ACAGTTGGACATTCAAACTGAGG 59.115 43.478 24.14 4.60 33.84 3.86
3444 6264 4.852138 CACAGTTGGACATTCAAACTGAG 58.148 43.478 24.14 15.51 33.84 3.35
3445 6265 4.898829 CACAGTTGGACATTCAAACTGA 57.101 40.909 24.14 0.00 33.84 3.41
3501 6321 3.181440 GGCAAGAGTCATTCCATATGGGA 60.181 47.826 21.78 14.33 46.61 4.37
3502 6322 3.152341 GGCAAGAGTCATTCCATATGGG 58.848 50.000 21.78 6.03 35.41 4.00
3626 6447 5.163509 TGCACTACTGGCATTTTTAACAACA 60.164 36.000 0.00 0.00 36.11 3.33
4819 7646 7.363007 GCGAATATGTAGAAGGTCATAGGATCA 60.363 40.741 0.00 0.00 31.46 2.92
4876 7703 4.383861 CAGACCTGGAGCGCTGCA 62.384 66.667 30.26 30.26 0.00 4.41
4946 7773 6.889301 ATGCTTCAGAAATCTCTTCACAAA 57.111 33.333 0.00 0.00 0.00 2.83
4978 7805 0.982852 TCCCATCCACATCCTTCGCT 60.983 55.000 0.00 0.00 0.00 4.93
5056 7883 3.326385 ATAGGTCCGGGACAGGGCA 62.326 63.158 27.32 8.44 37.71 5.36
5102 7929 2.061509 TCCGTCCGGTGAATGATAGA 57.938 50.000 0.00 0.00 36.47 1.98
5103 7930 2.361119 TCTTCCGTCCGGTGAATGATAG 59.639 50.000 0.00 0.00 36.47 2.08
5115 7942 0.685660 AACCTGGTCTTCTTCCGTCC 59.314 55.000 0.00 0.00 0.00 4.79
5167 7994 2.897846 CAACGGTGGGACGCAACA 60.898 61.111 8.41 0.00 43.02 3.33
5195 8022 3.953712 AACAATTAAAGGGCGGGAAAG 57.046 42.857 0.00 0.00 0.00 2.62
5344 8173 8.559536 CAACATGTATATAACCAGCTTGTAAGG 58.440 37.037 0.00 0.00 0.00 2.69
5438 8267 8.937207 TGCCCCTTAAAGTTAGTACAAAATTA 57.063 30.769 0.00 0.00 0.00 1.40
5441 8270 7.726738 AGATTGCCCCTTAAAGTTAGTACAAAA 59.273 33.333 0.00 0.00 0.00 2.44
5458 8287 2.692041 CAGAAAATCCTCAGATTGCCCC 59.308 50.000 0.00 0.00 42.03 5.80
5471 8300 8.946085 TGATAAACATGTAGTCCACAGAAAATC 58.054 33.333 0.00 0.00 41.51 2.17
5575 8404 8.732531 GGATTACACTTTAGAGATATACGCTCT 58.267 37.037 10.74 10.74 44.46 4.09
5576 8405 7.693120 CGGATTACACTTTAGAGATATACGCTC 59.307 40.741 0.00 0.00 0.00 5.03
5577 8406 7.389884 TCGGATTACACTTTAGAGATATACGCT 59.610 37.037 0.00 0.00 0.00 5.07
5579 8408 8.719648 AGTCGGATTACACTTTAGAGATATACG 58.280 37.037 0.00 0.00 0.00 3.06
5595 8425 8.264632 GTGTTGACGAATATTTAGTCGGATTAC 58.735 37.037 11.49 5.33 46.63 1.89
5596 8426 7.975058 TGTGTTGACGAATATTTAGTCGGATTA 59.025 33.333 11.49 4.80 46.63 1.75
5597 8427 6.814644 TGTGTTGACGAATATTTAGTCGGATT 59.185 34.615 11.49 0.00 46.63 3.01
5598 8428 6.334989 TGTGTTGACGAATATTTAGTCGGAT 58.665 36.000 11.49 0.00 46.63 4.18
5614 8444 5.412526 TTCGTTCCATTACTTGTGTTGAC 57.587 39.130 0.00 0.00 0.00 3.18
5633 8463 7.142680 ACAAGGGTGTATGTAATTTTGTTTCG 58.857 34.615 0.00 0.00 35.72 3.46
5688 8518 4.335874 CAGATCTTTCCATCTGCTTTCCAG 59.664 45.833 0.00 0.00 42.58 3.86
5728 8558 5.305585 GTGTTACAAGAACCAAGGAGATGA 58.694 41.667 0.00 0.00 0.00 2.92
5791 8626 9.924650 AACGATAATCAAGTTAGTTTGTCTACT 57.075 29.630 0.00 0.00 0.00 2.57
5815 8650 7.480810 AGCCCTTGTGAAATTCGATAATAAAC 58.519 34.615 0.00 0.00 0.00 2.01
5833 8668 2.230130 TGGGATGGTTTTAGCCCTTG 57.770 50.000 0.00 0.00 46.57 3.61
5834 8669 4.832560 ATATGGGATGGTTTTAGCCCTT 57.167 40.909 0.00 0.00 46.57 3.95
5837 8672 7.121315 GTCTCAATATATGGGATGGTTTTAGCC 59.879 40.741 0.00 0.00 41.66 3.93
5838 8673 7.885399 AGTCTCAATATATGGGATGGTTTTAGC 59.115 37.037 0.00 0.00 41.66 3.09
5842 8677 8.598041 GTCTAGTCTCAATATATGGGATGGTTT 58.402 37.037 0.00 0.00 41.66 3.27
5849 8684 5.105146 GCCAGGTCTAGTCTCAATATATGGG 60.105 48.000 0.00 0.00 0.00 4.00
5850 8685 5.719085 AGCCAGGTCTAGTCTCAATATATGG 59.281 44.000 0.00 0.00 0.00 2.74
5857 8692 4.274147 CTTCTAGCCAGGTCTAGTCTCAA 58.726 47.826 14.24 4.69 37.78 3.02
5858 8693 3.892284 CTTCTAGCCAGGTCTAGTCTCA 58.108 50.000 14.24 0.00 37.78 3.27
5859 8694 2.621526 GCTTCTAGCCAGGTCTAGTCTC 59.378 54.545 14.24 4.99 37.78 3.36
5860 8695 2.024846 TGCTTCTAGCCAGGTCTAGTCT 60.025 50.000 14.24 0.00 41.51 3.24
5861 8696 2.379972 TGCTTCTAGCCAGGTCTAGTC 58.620 52.381 14.24 8.22 41.51 2.59
5862 8697 2.534042 TGCTTCTAGCCAGGTCTAGT 57.466 50.000 14.24 0.00 41.51 2.57
5863 8698 3.431486 CCTTTGCTTCTAGCCAGGTCTAG 60.431 52.174 10.28 10.28 41.51 2.43
5864 8699 2.501723 CCTTTGCTTCTAGCCAGGTCTA 59.498 50.000 6.05 0.00 41.51 2.59
5865 8700 1.280421 CCTTTGCTTCTAGCCAGGTCT 59.720 52.381 6.05 0.00 41.51 3.85
5866 8701 1.743996 CCTTTGCTTCTAGCCAGGTC 58.256 55.000 6.05 0.00 41.51 3.85
5867 8702 0.322906 GCCTTTGCTTCTAGCCAGGT 60.323 55.000 12.88 0.00 40.82 4.00
5868 8703 1.372087 CGCCTTTGCTTCTAGCCAGG 61.372 60.000 8.83 8.83 41.51 4.45
5869 8704 1.986575 GCGCCTTTGCTTCTAGCCAG 61.987 60.000 0.00 0.00 41.51 4.85
5870 8705 2.040544 GCGCCTTTGCTTCTAGCCA 61.041 57.895 0.00 0.00 41.51 4.75
5871 8706 2.794621 GCGCCTTTGCTTCTAGCC 59.205 61.111 0.00 0.00 41.51 3.93
5872 8707 2.401195 CGCGCCTTTGCTTCTAGC 59.599 61.111 0.00 0.00 42.82 3.42
5873 8708 1.911293 TTGCGCGCCTTTGCTTCTAG 61.911 55.000 30.77 0.00 34.43 2.43
5874 8709 1.305219 ATTGCGCGCCTTTGCTTCTA 61.305 50.000 30.77 1.61 34.43 2.10
5875 8710 2.146073 AATTGCGCGCCTTTGCTTCT 62.146 50.000 30.77 0.00 34.43 2.85
5876 8711 1.734117 AATTGCGCGCCTTTGCTTC 60.734 52.632 30.77 0.00 34.43 3.86
5877 8712 2.023223 CAATTGCGCGCCTTTGCTT 61.023 52.632 30.77 9.74 34.43 3.91
5878 8713 2.431260 CAATTGCGCGCCTTTGCT 60.431 55.556 30.77 3.80 34.43 3.91
5879 8714 1.006314 TAACAATTGCGCGCCTTTGC 61.006 50.000 30.94 7.45 0.00 3.68
5880 8715 0.984109 CTAACAATTGCGCGCCTTTG 59.016 50.000 29.98 29.98 0.00 2.77
5881 8716 0.109319 CCTAACAATTGCGCGCCTTT 60.109 50.000 30.77 19.18 0.00 3.11
5882 8717 1.506262 CCTAACAATTGCGCGCCTT 59.494 52.632 30.77 19.40 0.00 4.35
5883 8718 3.051392 GCCTAACAATTGCGCGCCT 62.051 57.895 30.77 13.72 0.00 5.52
5884 8719 2.579518 GCCTAACAATTGCGCGCC 60.580 61.111 30.77 11.42 0.00 6.53
5885 8720 2.944049 CGCCTAACAATTGCGCGC 60.944 61.111 27.26 27.26 41.95 6.86
5889 8724 2.529151 CCATCAACGCCTAACAATTGC 58.471 47.619 5.05 0.00 0.00 3.56
5890 8725 2.529151 GCCATCAACGCCTAACAATTG 58.471 47.619 3.24 3.24 0.00 2.32
5891 8726 1.476488 GGCCATCAACGCCTAACAATT 59.524 47.619 0.00 0.00 43.48 2.32
5892 8727 1.102978 GGCCATCAACGCCTAACAAT 58.897 50.000 0.00 0.00 43.48 2.71
5893 8728 2.562125 GGCCATCAACGCCTAACAA 58.438 52.632 0.00 0.00 43.48 2.83
5894 8729 4.312052 GGCCATCAACGCCTAACA 57.688 55.556 0.00 0.00 43.48 2.41
5900 8735 2.117156 ATGCTCAGGCCATCAACGC 61.117 57.895 5.01 0.00 37.74 4.84
5901 8736 1.721664 CCATGCTCAGGCCATCAACG 61.722 60.000 5.01 0.00 37.74 4.10
5902 8737 1.389609 CCCATGCTCAGGCCATCAAC 61.390 60.000 5.01 0.00 37.74 3.18
5903 8738 1.076559 CCCATGCTCAGGCCATCAA 60.077 57.895 5.01 0.00 37.74 2.57
5904 8739 2.599032 CCCATGCTCAGGCCATCA 59.401 61.111 5.01 0.00 37.74 3.07
5905 8740 2.910994 GCCCATGCTCAGGCCATC 60.911 66.667 5.01 0.00 43.76 3.51
5915 8750 2.543641 GCAAAAACATAGAGCCCATGC 58.456 47.619 0.00 0.00 37.95 4.06
5916 8751 3.169355 GGCAAAAACATAGAGCCCATG 57.831 47.619 0.00 0.00 39.42 3.66
5920 8755 2.825532 TGAAGGGCAAAAACATAGAGCC 59.174 45.455 0.00 0.00 44.48 4.70
5921 8756 3.507622 ACTGAAGGGCAAAAACATAGAGC 59.492 43.478 0.00 0.00 0.00 4.09
5922 8757 5.335976 GGAACTGAAGGGCAAAAACATAGAG 60.336 44.000 0.00 0.00 0.00 2.43
5923 8758 4.522789 GGAACTGAAGGGCAAAAACATAGA 59.477 41.667 0.00 0.00 0.00 1.98
5924 8759 4.280677 TGGAACTGAAGGGCAAAAACATAG 59.719 41.667 0.00 0.00 0.00 2.23
5925 8760 4.219115 TGGAACTGAAGGGCAAAAACATA 58.781 39.130 0.00 0.00 0.00 2.29
5926 8761 3.037549 TGGAACTGAAGGGCAAAAACAT 58.962 40.909 0.00 0.00 0.00 2.71
5927 8762 2.461695 TGGAACTGAAGGGCAAAAACA 58.538 42.857 0.00 0.00 0.00 2.83
5928 8763 3.181466 ACATGGAACTGAAGGGCAAAAAC 60.181 43.478 0.00 0.00 0.00 2.43
5929 8764 3.037549 ACATGGAACTGAAGGGCAAAAA 58.962 40.909 0.00 0.00 0.00 1.94
5930 8765 2.676748 ACATGGAACTGAAGGGCAAAA 58.323 42.857 0.00 0.00 0.00 2.44
5931 8766 2.364970 CAACATGGAACTGAAGGGCAAA 59.635 45.455 0.00 0.00 0.00 3.68
5932 8767 1.962807 CAACATGGAACTGAAGGGCAA 59.037 47.619 0.00 0.00 0.00 4.52
5933 8768 1.144708 TCAACATGGAACTGAAGGGCA 59.855 47.619 0.00 0.00 0.00 5.36
5934 8769 1.909700 TCAACATGGAACTGAAGGGC 58.090 50.000 0.00 0.00 0.00 5.19
5935 8770 3.629398 GCTATCAACATGGAACTGAAGGG 59.371 47.826 0.00 0.00 0.00 3.95
5936 8771 3.629398 GGCTATCAACATGGAACTGAAGG 59.371 47.826 0.00 0.00 0.00 3.46
5937 8772 4.521146 AGGCTATCAACATGGAACTGAAG 58.479 43.478 0.00 0.00 0.00 3.02
5938 8773 4.574674 AGGCTATCAACATGGAACTGAA 57.425 40.909 0.00 0.00 0.00 3.02
5939 8774 4.574674 AAGGCTATCAACATGGAACTGA 57.425 40.909 0.00 0.00 0.00 3.41
5940 8775 5.882557 ACTAAAGGCTATCAACATGGAACTG 59.117 40.000 0.00 0.00 0.00 3.16
5941 8776 6.067217 ACTAAAGGCTATCAACATGGAACT 57.933 37.500 0.00 0.00 0.00 3.01
5942 8777 6.183360 GGAACTAAAGGCTATCAACATGGAAC 60.183 42.308 0.00 0.00 0.00 3.62
5943 8778 5.885912 GGAACTAAAGGCTATCAACATGGAA 59.114 40.000 0.00 0.00 0.00 3.53
5944 8779 5.437060 GGAACTAAAGGCTATCAACATGGA 58.563 41.667 0.00 0.00 0.00 3.41
5945 8780 4.273480 CGGAACTAAAGGCTATCAACATGG 59.727 45.833 0.00 0.00 0.00 3.66
5946 8781 4.260784 GCGGAACTAAAGGCTATCAACATG 60.261 45.833 0.00 0.00 0.00 3.21
5947 8782 3.877508 GCGGAACTAAAGGCTATCAACAT 59.122 43.478 0.00 0.00 0.00 2.71
5948 8783 3.055385 AGCGGAACTAAAGGCTATCAACA 60.055 43.478 0.00 0.00 33.19 3.33
5949 8784 3.532542 AGCGGAACTAAAGGCTATCAAC 58.467 45.455 0.00 0.00 33.19 3.18
5950 8785 3.906720 AGCGGAACTAAAGGCTATCAA 57.093 42.857 0.00 0.00 33.19 2.57
5951 8786 3.906720 AAGCGGAACTAAAGGCTATCA 57.093 42.857 0.00 0.00 34.82 2.15
5952 8787 5.358090 ACTAAAGCGGAACTAAAGGCTATC 58.642 41.667 0.00 0.00 34.82 2.08
5953 8788 5.354842 ACTAAAGCGGAACTAAAGGCTAT 57.645 39.130 0.00 0.00 34.82 2.97
5954 8789 4.813750 ACTAAAGCGGAACTAAAGGCTA 57.186 40.909 0.00 0.00 34.82 3.93
5955 8790 3.697619 ACTAAAGCGGAACTAAAGGCT 57.302 42.857 0.00 0.00 37.33 4.58
5956 8791 4.214758 TGAAACTAAAGCGGAACTAAAGGC 59.785 41.667 0.00 0.00 0.00 4.35
5957 8792 5.934935 TGAAACTAAAGCGGAACTAAAGG 57.065 39.130 0.00 0.00 0.00 3.11
5958 8793 5.795441 GCATGAAACTAAAGCGGAACTAAAG 59.205 40.000 0.00 0.00 0.00 1.85
5959 8794 5.335348 GGCATGAAACTAAAGCGGAACTAAA 60.335 40.000 0.00 0.00 0.00 1.85
5960 8795 4.155280 GGCATGAAACTAAAGCGGAACTAA 59.845 41.667 0.00 0.00 0.00 2.24
5961 8796 3.687698 GGCATGAAACTAAAGCGGAACTA 59.312 43.478 0.00 0.00 0.00 2.24
5962 8797 2.488153 GGCATGAAACTAAAGCGGAACT 59.512 45.455 0.00 0.00 0.00 3.01
5963 8798 2.227865 TGGCATGAAACTAAAGCGGAAC 59.772 45.455 0.00 0.00 0.00 3.62
5964 8799 2.509569 TGGCATGAAACTAAAGCGGAA 58.490 42.857 0.00 0.00 0.00 4.30
5965 8800 2.192664 TGGCATGAAACTAAAGCGGA 57.807 45.000 0.00 0.00 0.00 5.54
5966 8801 4.836125 ATATGGCATGAAACTAAAGCGG 57.164 40.909 10.98 0.00 0.00 5.52
5967 8802 7.182761 GCTATATATGGCATGAAACTAAAGCG 58.817 38.462 15.56 0.00 34.10 4.68
5968 8803 7.337942 AGGCTATATATGGCATGAAACTAAAGC 59.662 37.037 21.04 7.88 35.81 3.51
5969 8804 8.798859 AGGCTATATATGGCATGAAACTAAAG 57.201 34.615 21.04 0.00 35.81 1.85
5970 8805 9.013229 CAAGGCTATATATGGCATGAAACTAAA 57.987 33.333 21.04 0.00 35.81 1.85
5971 8806 8.163408 ACAAGGCTATATATGGCATGAAACTAA 58.837 33.333 23.63 0.00 35.81 2.24
5972 8807 7.689299 ACAAGGCTATATATGGCATGAAACTA 58.311 34.615 23.63 0.00 35.81 2.24
5973 8808 6.546484 ACAAGGCTATATATGGCATGAAACT 58.454 36.000 23.63 10.05 35.81 2.66
5974 8809 6.127897 GGACAAGGCTATATATGGCATGAAAC 60.128 42.308 23.63 16.26 35.81 2.78
5975 8810 5.945784 GGACAAGGCTATATATGGCATGAAA 59.054 40.000 23.63 0.00 35.81 2.69
5976 8811 5.251468 AGGACAAGGCTATATATGGCATGAA 59.749 40.000 23.63 0.00 35.81 2.57
5977 8812 4.784838 AGGACAAGGCTATATATGGCATGA 59.215 41.667 23.63 0.00 35.81 3.07
5978 8813 5.108187 AGGACAAGGCTATATATGGCATG 57.892 43.478 21.04 19.54 35.81 4.06
5979 8814 5.014544 ACAAGGACAAGGCTATATATGGCAT 59.985 40.000 21.04 12.66 35.81 4.40
5980 8815 4.350816 ACAAGGACAAGGCTATATATGGCA 59.649 41.667 21.04 0.00 35.81 4.92
5981 8816 4.697352 CACAAGGACAAGGCTATATATGGC 59.303 45.833 12.38 12.38 0.00 4.40
5982 8817 5.013079 TCCACAAGGACAAGGCTATATATGG 59.987 44.000 0.00 0.00 39.61 2.74
5983 8818 6.114187 TCCACAAGGACAAGGCTATATATG 57.886 41.667 0.00 0.00 39.61 1.78
5984 8819 6.763715 TTCCACAAGGACAAGGCTATATAT 57.236 37.500 0.00 0.00 45.73 0.86
5985 8820 6.328934 TGATTCCACAAGGACAAGGCTATATA 59.671 38.462 0.00 0.00 45.73 0.86
5986 8821 5.132648 TGATTCCACAAGGACAAGGCTATAT 59.867 40.000 0.00 0.00 45.73 0.86
5987 8822 4.473196 TGATTCCACAAGGACAAGGCTATA 59.527 41.667 0.00 0.00 45.73 1.31
5988 8823 3.266772 TGATTCCACAAGGACAAGGCTAT 59.733 43.478 0.00 0.00 45.73 2.97
5989 8824 2.642311 TGATTCCACAAGGACAAGGCTA 59.358 45.455 0.00 0.00 45.73 3.93
5990 8825 1.425066 TGATTCCACAAGGACAAGGCT 59.575 47.619 0.00 0.00 45.73 4.58
5991 8826 1.815003 CTGATTCCACAAGGACAAGGC 59.185 52.381 0.00 0.00 45.73 4.35
5992 8827 3.008375 TCTCTGATTCCACAAGGACAAGG 59.992 47.826 0.00 0.00 45.73 3.61
5993 8828 4.020751 TCTCTCTGATTCCACAAGGACAAG 60.021 45.833 0.00 0.00 45.73 3.16
5994 8829 3.903714 TCTCTCTGATTCCACAAGGACAA 59.096 43.478 0.00 0.00 45.73 3.18
5995 8830 3.510459 TCTCTCTGATTCCACAAGGACA 58.490 45.455 0.00 0.00 45.73 4.02
5996 8831 3.766591 TCTCTCTCTGATTCCACAAGGAC 59.233 47.826 0.00 0.00 45.73 3.85
5997 8832 4.022603 CTCTCTCTCTGATTCCACAAGGA 58.977 47.826 0.00 0.00 43.93 3.36
5998 8833 4.022603 TCTCTCTCTCTGATTCCACAAGG 58.977 47.826 0.00 0.00 0.00 3.61
5999 8834 4.949238 TCTCTCTCTCTCTGATTCCACAAG 59.051 45.833 0.00 0.00 0.00 3.16
6000 8835 4.928263 TCTCTCTCTCTCTGATTCCACAA 58.072 43.478 0.00 0.00 0.00 3.33
6001 8836 4.227073 TCTCTCTCTCTCTCTGATTCCACA 59.773 45.833 0.00 0.00 0.00 4.17
6002 8837 4.780815 TCTCTCTCTCTCTCTGATTCCAC 58.219 47.826 0.00 0.00 0.00 4.02
6003 8838 4.721274 TCTCTCTCTCTCTCTCTGATTCCA 59.279 45.833 0.00 0.00 0.00 3.53
6004 8839 5.070981 TCTCTCTCTCTCTCTCTCTGATTCC 59.929 48.000 0.00 0.00 0.00 3.01
6005 8840 6.041409 TCTCTCTCTCTCTCTCTCTCTGATTC 59.959 46.154 0.00 0.00 0.00 2.52
6006 8841 5.901853 TCTCTCTCTCTCTCTCTCTCTGATT 59.098 44.000 0.00 0.00 0.00 2.57
6007 8842 5.462240 TCTCTCTCTCTCTCTCTCTCTGAT 58.538 45.833 0.00 0.00 0.00 2.90
6008 8843 4.871822 TCTCTCTCTCTCTCTCTCTCTGA 58.128 47.826 0.00 0.00 0.00 3.27
6009 8844 4.892345 TCTCTCTCTCTCTCTCTCTCTCTG 59.108 50.000 0.00 0.00 0.00 3.35
6010 8845 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
6011 8846 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
6012 8847 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
6013 8848 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
6014 8849 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
6015 8850 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
6016 8851 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
6017 8852 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
6018 8853 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
6019 8854 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
6020 8855 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
6021 8856 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
6022 8857 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
6023 8858 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
6024 8859 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
6025 8860 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
6026 8861 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
6027 8862 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
6028 8863 5.136068 TCTCTCTCTCTCTCTCTCTCTCT 57.864 47.826 0.00 0.00 0.00 3.10
6029 8864 7.531857 TTATCTCTCTCTCTCTCTCTCTCTC 57.468 44.000 0.00 0.00 0.00 3.20
6030 8865 7.345653 TGTTTATCTCTCTCTCTCTCTCTCTCT 59.654 40.741 0.00 0.00 0.00 3.10
6031 8866 7.500992 TGTTTATCTCTCTCTCTCTCTCTCTC 58.499 42.308 0.00 0.00 0.00 3.20
6032 8867 7.437713 TGTTTATCTCTCTCTCTCTCTCTCT 57.562 40.000 0.00 0.00 0.00 3.10
6033 8868 7.716998 ACATGTTTATCTCTCTCTCTCTCTCTC 59.283 40.741 0.00 0.00 0.00 3.20
6034 8869 7.577303 ACATGTTTATCTCTCTCTCTCTCTCT 58.423 38.462 0.00 0.00 0.00 3.10
6035 8870 7.807977 ACATGTTTATCTCTCTCTCTCTCTC 57.192 40.000 0.00 0.00 0.00 3.20
6036 8871 9.120538 GTTACATGTTTATCTCTCTCTCTCTCT 57.879 37.037 2.30 0.00 0.00 3.10
6037 8872 9.120538 AGTTACATGTTTATCTCTCTCTCTCTC 57.879 37.037 2.30 0.00 0.00 3.20
6040 8875 9.127277 GGTAGTTACATGTTTATCTCTCTCTCT 57.873 37.037 2.30 0.00 0.00 3.10
6041 8876 8.904834 TGGTAGTTACATGTTTATCTCTCTCTC 58.095 37.037 2.30 0.00 0.00 3.20
6042 8877 8.824756 TGGTAGTTACATGTTTATCTCTCTCT 57.175 34.615 2.30 0.00 0.00 3.10
6043 8878 7.650104 GCTGGTAGTTACATGTTTATCTCTCTC 59.350 40.741 2.30 0.00 0.00 3.20
6044 8879 7.343316 AGCTGGTAGTTACATGTTTATCTCTCT 59.657 37.037 2.30 0.00 0.00 3.10
6045 8880 7.436673 CAGCTGGTAGTTACATGTTTATCTCTC 59.563 40.741 2.30 0.00 0.00 3.20
6046 8881 7.093289 ACAGCTGGTAGTTACATGTTTATCTCT 60.093 37.037 19.93 0.00 0.00 3.10
6047 8882 7.010552 CACAGCTGGTAGTTACATGTTTATCTC 59.989 40.741 19.93 0.00 0.00 2.75
6048 8883 6.818644 CACAGCTGGTAGTTACATGTTTATCT 59.181 38.462 19.93 0.44 0.00 1.98
6049 8884 6.037172 CCACAGCTGGTAGTTACATGTTTATC 59.963 42.308 19.93 0.00 32.03 1.75
6050 8885 5.880332 CCACAGCTGGTAGTTACATGTTTAT 59.120 40.000 19.93 0.00 32.03 1.40
6051 8886 5.242434 CCACAGCTGGTAGTTACATGTTTA 58.758 41.667 19.93 0.00 32.03 2.01
6052 8887 4.072131 CCACAGCTGGTAGTTACATGTTT 58.928 43.478 19.93 0.00 32.03 2.83
6053 8888 3.674997 CCACAGCTGGTAGTTACATGTT 58.325 45.455 19.93 0.00 32.03 2.71
6054 8889 3.334583 CCACAGCTGGTAGTTACATGT 57.665 47.619 19.93 2.69 32.03 3.21
6082 8917 1.843851 TCTAGCCCACCAGGTTAATGG 59.156 52.381 0.00 0.00 46.47 3.16
6083 8918 3.136443 TCATCTAGCCCACCAGGTTAATG 59.864 47.826 0.00 0.00 38.26 1.90
6084 8919 3.392616 CTCATCTAGCCCACCAGGTTAAT 59.607 47.826 0.00 0.00 38.26 1.40
6085 8920 2.771943 CTCATCTAGCCCACCAGGTTAA 59.228 50.000 0.00 0.00 38.26 2.01
6086 8921 2.023404 TCTCATCTAGCCCACCAGGTTA 60.023 50.000 0.00 0.00 38.26 2.85
6087 8922 1.207791 CTCATCTAGCCCACCAGGTT 58.792 55.000 0.00 0.00 38.26 3.50
6088 8923 0.339859 TCTCATCTAGCCCACCAGGT 59.660 55.000 0.00 0.00 38.26 4.00
6089 8924 1.347050 CATCTCATCTAGCCCACCAGG 59.653 57.143 0.00 0.00 39.47 4.45
6090 8925 1.347050 CCATCTCATCTAGCCCACCAG 59.653 57.143 0.00 0.00 0.00 4.00
6091 8926 1.427809 CCATCTCATCTAGCCCACCA 58.572 55.000 0.00 0.00 0.00 4.17
6092 8927 0.036022 GCCATCTCATCTAGCCCACC 59.964 60.000 0.00 0.00 0.00 4.61
6093 8928 0.761187 TGCCATCTCATCTAGCCCAC 59.239 55.000 0.00 0.00 0.00 4.61
6094 8929 1.510492 TTGCCATCTCATCTAGCCCA 58.490 50.000 0.00 0.00 0.00 5.36
6095 8930 2.039480 TGATTGCCATCTCATCTAGCCC 59.961 50.000 0.00 0.00 0.00 5.19
6096 8931 3.413846 TGATTGCCATCTCATCTAGCC 57.586 47.619 0.00 0.00 0.00 3.93
6097 8932 7.627298 ATTAATGATTGCCATCTCATCTAGC 57.373 36.000 0.00 0.00 33.53 3.42
6100 8935 9.542462 CAAAAATTAATGATTGCCATCTCATCT 57.458 29.630 0.00 0.00 33.53 2.90
6101 8936 9.537192 TCAAAAATTAATGATTGCCATCTCATC 57.463 29.630 0.00 0.00 33.53 2.92
6103 8938 9.320352 CATCAAAAATTAATGATTGCCATCTCA 57.680 29.630 0.00 0.00 34.12 3.27
6104 8939 9.321562 ACATCAAAAATTAATGATTGCCATCTC 57.678 29.630 0.00 0.00 34.12 2.75
6105 8940 9.321562 GACATCAAAAATTAATGATTGCCATCT 57.678 29.630 0.00 0.00 34.12 2.90
6106 8941 8.553696 GGACATCAAAAATTAATGATTGCCATC 58.446 33.333 8.07 0.00 34.12 3.51
6107 8942 8.269317 AGGACATCAAAAATTAATGATTGCCAT 58.731 29.630 15.98 0.00 34.12 4.40
6108 8943 7.622713 AGGACATCAAAAATTAATGATTGCCA 58.377 30.769 15.98 0.00 34.12 4.92
6109 8944 9.252962 CTAGGACATCAAAAATTAATGATTGCC 57.747 33.333 8.07 7.67 34.12 4.52
6110 8945 9.807649 ACTAGGACATCAAAAATTAATGATTGC 57.192 29.630 8.07 2.86 34.12 3.56
6122 8957 9.871238 GAGTAGTCAATAACTAGGACATCAAAA 57.129 33.333 0.00 0.00 41.17 2.44
6123 8958 8.475639 GGAGTAGTCAATAACTAGGACATCAAA 58.524 37.037 0.00 0.00 41.17 2.69
6124 8959 7.069578 GGGAGTAGTCAATAACTAGGACATCAA 59.930 40.741 0.00 0.00 41.17 2.57
6125 8960 6.550108 GGGAGTAGTCAATAACTAGGACATCA 59.450 42.308 0.00 0.00 41.17 3.07
6126 8961 6.778559 AGGGAGTAGTCAATAACTAGGACATC 59.221 42.308 0.00 0.00 41.17 3.06
6127 8962 6.684538 AGGGAGTAGTCAATAACTAGGACAT 58.315 40.000 0.00 0.00 41.17 3.06
6128 8963 6.088541 AGGGAGTAGTCAATAACTAGGACA 57.911 41.667 0.00 0.00 41.17 4.02
6129 8964 6.638096 GAGGGAGTAGTCAATAACTAGGAC 57.362 45.833 0.00 0.00 41.17 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.