Multiple sequence alignment - TraesCS2A01G552000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G552000 chr2A 100.000 9084 0 0 1 9084 758404790 758395707 0.000000e+00 16776.0
1 TraesCS2A01G552000 chr2A 74.033 181 32 6 482 649 93926299 93926477 9.850000e-05 60.2
2 TraesCS2A01G552000 chr2B 95.771 4256 139 21 4104 8333 770684035 770679795 0.000000e+00 6824.0
3 TraesCS2A01G552000 chr2B 91.991 3259 153 45 845 4040 770687263 770684050 0.000000e+00 4473.0
4 TraesCS2A01G552000 chr2B 96.355 631 22 1 8454 9084 770679476 770678847 0.000000e+00 1037.0
5 TraesCS2A01G552000 chr2B 96.032 126 4 1 8332 8456 770679633 770679508 4.300000e-48 204.0
6 TraesCS2A01G552000 chr2D 94.378 3237 104 32 5281 8456 627923121 627919902 0.000000e+00 4898.0
7 TraesCS2A01G552000 chr2D 94.761 1317 39 9 2714 4000 627925575 627924259 0.000000e+00 2023.0
8 TraesCS2A01G552000 chr2D 96.629 1157 31 2 4101 5257 627924258 627923110 0.000000e+00 1914.0
9 TraesCS2A01G552000 chr2D 91.398 1209 53 17 824 2014 627927489 627926314 0.000000e+00 1609.0
10 TraesCS2A01G552000 chr2D 95.197 687 31 2 2032 2717 627926340 627925655 0.000000e+00 1085.0
11 TraesCS2A01G552000 chr2D 97.297 629 17 0 8454 9082 627919870 627919242 0.000000e+00 1068.0
12 TraesCS2A01G552000 chr2D 86.275 102 14 0 5 106 627928421 627928320 2.680000e-20 111.0
13 TraesCS2A01G552000 chr2D 100.000 29 0 0 481 509 645286006 645286034 5.000000e-03 54.7
14 TraesCS2A01G552000 chr4D 83.333 276 38 5 4904 5178 233078801 233079069 1.960000e-61 248.0
15 TraesCS2A01G552000 chr4D 80.392 102 19 1 510 611 258893491 258893591 9.780000e-10 76.8
16 TraesCS2A01G552000 chr4D 77.397 146 22 2 482 617 401372969 401372825 9.780000e-10 76.8
17 TraesCS2A01G552000 chr4B 82.971 276 39 5 4904 5178 232098151 232098419 9.110000e-60 243.0
18 TraesCS2A01G552000 chr4A 82.971 276 37 7 4904 5178 363081503 363081769 3.280000e-59 241.0
19 TraesCS2A01G552000 chr7A 89.130 138 12 3 5047 5182 535904438 535904574 1.570000e-37 169.0
20 TraesCS2A01G552000 chr1D 82.707 133 18 3 484 616 28560008 28560135 7.450000e-21 113.0
21 TraesCS2A01G552000 chr1D 82.524 103 15 3 510 611 136960032 136959932 4.520000e-13 87.9
22 TraesCS2A01G552000 chr3A 83.784 111 16 1 510 620 584035100 584034992 4.490000e-18 104.0
23 TraesCS2A01G552000 chr3A 79.710 138 25 2 484 621 526514843 526514709 7.510000e-16 97.1
24 TraesCS2A01G552000 chr3D 76.829 164 31 4 477 636 589662742 589662582 1.630000e-12 86.1
25 TraesCS2A01G552000 chr7B 80.374 107 21 0 510 616 413112402 413112296 2.100000e-11 82.4
26 TraesCS2A01G552000 chr5B 78.014 141 22 4 480 611 458630475 458630335 7.560000e-11 80.5
27 TraesCS2A01G552000 chr5B 79.279 111 20 3 510 619 531666357 531666249 3.520000e-09 75.0
28 TraesCS2A01G552000 chr1A 80.374 107 18 3 510 615 483863800 483863904 2.720000e-10 78.7
29 TraesCS2A01G552000 chr6A 100.000 32 0 0 624 655 556865858 556865827 9.850000e-05 60.2
30 TraesCS2A01G552000 chr7D 97.059 34 0 1 627 659 403785920 403785887 1.000000e-03 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G552000 chr2A 758395707 758404790 9083 True 16776.000000 16776 100.00000 1 9084 1 chr2A.!!$R1 9083
1 TraesCS2A01G552000 chr2B 770678847 770687263 8416 True 3134.500000 6824 95.03725 845 9084 4 chr2B.!!$R1 8239
2 TraesCS2A01G552000 chr2D 627919242 627928421 9179 True 1815.428571 4898 93.70500 5 9082 7 chr2D.!!$R1 9077

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
937 1108 0.038892 CTTCGGTTCGGAACTTCGGA 60.039 55.000 19.40 10.01 0.00 4.55 F
989 1166 0.174845 TAGACGGACGCCAATCCAAG 59.825 55.000 0.00 0.00 38.87 3.61 F
1494 1695 0.178998 CTCATAGCATTGGCCTGCCT 60.179 55.000 13.08 4.18 43.33 4.75 F
1506 1707 0.393537 GCCTGCCTCTGCACAACTAT 60.394 55.000 0.00 0.00 44.23 2.12 F
2823 3179 0.940126 GGTCACACAGTGCAAGACAG 59.060 55.000 18.00 0.00 32.98 3.51 F
3505 3891 0.179020 TCAGGTTTGGTGGACTGCTG 60.179 55.000 0.00 0.00 0.00 4.41 F
5269 5665 0.177604 ACTGCTAGAGCTGCATGGTC 59.822 55.000 1.02 7.11 42.72 4.02 F
5287 5683 1.130561 GTCGGTTCAGCATTAGCAACC 59.869 52.381 0.00 0.00 45.49 3.77 F
6279 6687 1.525197 TGCGAGTAAAAGTTGCGACAG 59.475 47.619 6.90 0.00 30.37 3.51 F
7277 7740 1.005450 GGCACCTCTTAACCCATTCCA 59.995 52.381 0.00 0.00 0.00 3.53 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2444 2702 1.002087 ACCCTCACGCAGAACCTAAAG 59.998 52.381 0.00 0.00 0.00 1.85 R
2939 3325 0.174617 TCGTGCAAGTCATATGCCGA 59.825 50.000 0.00 7.61 43.16 5.54 R
2956 3342 2.485426 ACAGTTTCCATGCAATCTGTCG 59.515 45.455 7.19 0.00 33.00 4.35 R
3119 3505 2.926778 ACTTCTCAGAACTTGCTGCT 57.073 45.000 0.00 0.00 35.86 4.24 R
4046 4432 2.185387 ACCAACGTAATACTGGCTCCT 58.815 47.619 3.09 0.00 33.19 3.69 R
5287 5683 2.163818 TAAACAGTCAGGGCAAGTCG 57.836 50.000 0.00 0.00 0.00 4.18 R
6396 6809 0.036732 AAGAATGAGCGGGCAGACAA 59.963 50.000 0.00 0.00 0.00 3.18 R
6397 6810 0.391661 GAAGAATGAGCGGGCAGACA 60.392 55.000 0.00 0.00 0.00 3.41 R
7455 7918 0.528017 TACAGAAGGCAGAGTCAGCG 59.472 55.000 1.01 0.00 0.00 5.18 R
8872 9535 0.464916 AAACCGACGACCTTGCCTTT 60.465 50.000 0.00 0.00 0.00 3.11 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
54 55 3.992943 TTGGTCCACCTCGACAAATAT 57.007 42.857 0.00 0.00 36.82 1.28
56 57 2.569853 TGGTCCACCTCGACAAATATGT 59.430 45.455 0.00 0.00 38.71 2.29
68 69 4.938832 CGACAAATATGTTAGGGACAACCA 59.061 41.667 0.00 0.00 42.62 3.67
103 184 1.210538 TGGCAGATCCAGAGCTTGAT 58.789 50.000 0.00 0.00 40.72 2.57
107 188 3.478509 GCAGATCCAGAGCTTGATGATT 58.521 45.455 0.00 0.00 0.00 2.57
108 189 3.251245 GCAGATCCAGAGCTTGATGATTG 59.749 47.826 0.00 0.00 0.00 2.67
109 190 3.251245 CAGATCCAGAGCTTGATGATTGC 59.749 47.826 0.00 0.00 0.00 3.56
112 193 1.660167 CAGAGCTTGATGATTGCCGA 58.340 50.000 0.00 0.00 0.00 5.54
122 203 3.100862 GATTGCCGAGCGGTGAAGC 62.101 63.158 10.94 3.35 37.65 3.86
164 245 1.975407 CACAAGGCAGGGGAAGCAG 60.975 63.158 0.00 0.00 0.00 4.24
167 248 1.849823 AAGGCAGGGGAAGCAGACT 60.850 57.895 0.00 0.00 0.00 3.24
183 264 0.818296 GACTGCACCCTCGTAGACAT 59.182 55.000 0.00 0.00 0.00 3.06
191 272 1.331138 CCCTCGTAGACATGAGACGAC 59.669 57.143 14.40 5.40 40.45 4.34
193 274 2.031068 CCTCGTAGACATGAGACGACTG 59.969 54.545 14.40 8.38 40.45 3.51
200 281 1.069204 ACATGAGACGACTGTTGTGCT 59.931 47.619 5.19 2.88 0.00 4.40
202 283 0.317854 TGAGACGACTGTTGTGCTCG 60.318 55.000 5.19 0.00 0.00 5.03
207 288 1.566563 GACTGTTGTGCTCGTGCTG 59.433 57.895 11.19 0.00 40.48 4.41
210 291 0.599991 CTGTTGTGCTCGTGCTGGTA 60.600 55.000 11.19 0.00 40.48 3.25
245 326 8.633561 GCCATTGCCTCTAATAACTTTTAGATT 58.366 33.333 0.00 0.00 37.52 2.40
281 362 6.718522 AGTTACTCTTAGTCTCTTATGGCC 57.281 41.667 0.00 0.00 0.00 5.36
289 370 3.304829 AGTCTCTTATGGCCTTCTCTCC 58.695 50.000 3.32 0.00 0.00 3.71
326 407 0.457681 GTCACTCTCGCTCTTGCTCC 60.458 60.000 0.00 0.00 36.97 4.70
345 426 1.733402 CGCCGCCTCTCATCTCTCTT 61.733 60.000 0.00 0.00 0.00 2.85
359 440 0.787084 TCTCTTCCACTCCACCTCCT 59.213 55.000 0.00 0.00 0.00 3.69
367 448 1.078567 CTCCACCTCCTGCTCTTGC 60.079 63.158 0.00 0.00 40.20 4.01
369 450 1.130054 TCCACCTCCTGCTCTTGCTT 61.130 55.000 0.00 0.00 40.48 3.91
379 460 2.530177 TGCTCTTGCTTCGTTATCTCG 58.470 47.619 0.00 0.00 40.48 4.04
392 473 3.127203 CGTTATCTCGTCACCTCACTCTT 59.873 47.826 0.00 0.00 0.00 2.85
394 475 3.584406 ATCTCGTCACCTCACTCTTTG 57.416 47.619 0.00 0.00 0.00 2.77
398 479 2.429250 TCGTCACCTCACTCTTTGTTCA 59.571 45.455 0.00 0.00 0.00 3.18
410 491 5.767168 CACTCTTTGTTCATTCTTCCTCCTT 59.233 40.000 0.00 0.00 0.00 3.36
415 496 6.433847 TTGTTCATTCTTCCTCCTTCACTA 57.566 37.500 0.00 0.00 0.00 2.74
438 519 3.006752 CCTGCAAAACTAGGCCAAAATCA 59.993 43.478 5.01 0.00 0.00 2.57
439 520 3.988819 TGCAAAACTAGGCCAAAATCAC 58.011 40.909 5.01 0.00 0.00 3.06
443 524 5.600696 CAAAACTAGGCCAAAATCACTGTT 58.399 37.500 5.01 0.00 0.00 3.16
448 529 4.961438 AGGCCAAAATCACTGTTTTGAT 57.039 36.364 5.01 0.00 46.78 2.57
454 535 6.292488 GCCAAAATCACTGTTTTGATCTTGTG 60.292 38.462 12.26 0.00 46.78 3.33
472 554 7.202016 TCTTGTGGAAAACTTTAGCACTATG 57.798 36.000 0.00 0.00 0.00 2.23
480 562 4.910458 ACTTTAGCACTATGTGAACCCT 57.090 40.909 1.52 0.00 35.23 4.34
490 572 4.786454 ACTATGTGAACCCTTTAGGCCTTA 59.214 41.667 12.58 0.00 40.58 2.69
502 584 6.239887 CCCTTTAGGCCTTATACAATGCTAGA 60.240 42.308 12.58 0.00 0.00 2.43
511 603 9.039870 GCCTTATACAATGCTAGATGCTTATAG 57.960 37.037 0.00 0.00 43.37 1.31
523 615 8.488764 GCTAGATGCTTATAGAAAAGTAAACCG 58.511 37.037 5.51 0.00 38.95 4.44
524 616 7.787725 AGATGCTTATAGAAAAGTAAACCGG 57.212 36.000 0.00 0.00 0.00 5.28
541 633 8.498358 AGTAAACCGGATTTTCTTAAAAGTACG 58.502 33.333 9.46 0.00 37.96 3.67
546 638 5.963586 CGGATTTTCTTAAAAGTACGGATGC 59.036 40.000 0.00 0.00 35.45 3.91
547 639 6.263344 GGATTTTCTTAAAAGTACGGATGCC 58.737 40.000 0.00 0.00 33.22 4.40
548 640 6.095021 GGATTTTCTTAAAAGTACGGATGCCT 59.905 38.462 0.00 0.00 33.22 4.75
549 641 7.281549 GGATTTTCTTAAAAGTACGGATGCCTA 59.718 37.037 0.00 0.00 33.22 3.93
550 642 8.747538 ATTTTCTTAAAAGTACGGATGCCTAT 57.252 30.769 0.00 0.00 33.22 2.57
551 643 8.570068 TTTTCTTAAAAGTACGGATGCCTATT 57.430 30.769 0.00 0.00 0.00 1.73
552 644 8.570068 TTTCTTAAAAGTACGGATGCCTATTT 57.430 30.769 0.00 0.00 0.00 1.40
553 645 7.781548 TCTTAAAAGTACGGATGCCTATTTC 57.218 36.000 0.00 0.00 0.00 2.17
554 646 7.562135 TCTTAAAAGTACGGATGCCTATTTCT 58.438 34.615 0.00 0.00 0.00 2.52
555 647 8.698210 TCTTAAAAGTACGGATGCCTATTTCTA 58.302 33.333 0.00 0.00 0.00 2.10
556 648 8.652810 TTAAAAGTACGGATGCCTATTTCTAC 57.347 34.615 0.00 0.00 0.00 2.59
557 649 5.864418 AAGTACGGATGCCTATTTCTACA 57.136 39.130 0.00 0.00 0.00 2.74
558 650 5.455056 AGTACGGATGCCTATTTCTACAG 57.545 43.478 0.00 0.00 0.00 2.74
559 651 5.138276 AGTACGGATGCCTATTTCTACAGA 58.862 41.667 0.00 0.00 0.00 3.41
560 652 5.597182 AGTACGGATGCCTATTTCTACAGAA 59.403 40.000 0.00 0.00 0.00 3.02
561 653 4.950050 ACGGATGCCTATTTCTACAGAAG 58.050 43.478 0.00 0.00 35.21 2.85
562 654 4.649674 ACGGATGCCTATTTCTACAGAAGA 59.350 41.667 0.00 0.00 35.21 2.87
563 655 5.221342 ACGGATGCCTATTTCTACAGAAGAG 60.221 44.000 0.00 0.00 35.05 2.85
564 656 5.010112 CGGATGCCTATTTCTACAGAAGAGA 59.990 44.000 5.12 0.00 35.05 3.10
565 657 6.220201 GGATGCCTATTTCTACAGAAGAGAC 58.780 44.000 5.12 0.00 35.05 3.36
566 658 5.250235 TGCCTATTTCTACAGAAGAGACG 57.750 43.478 5.12 0.00 35.05 4.18
567 659 4.045783 GCCTATTTCTACAGAAGAGACGC 58.954 47.826 5.12 0.00 35.05 5.19
568 660 4.612943 CCTATTTCTACAGAAGAGACGCC 58.387 47.826 5.12 0.00 35.05 5.68
569 661 4.339814 CCTATTTCTACAGAAGAGACGCCT 59.660 45.833 5.12 0.00 35.05 5.52
570 662 5.531659 CCTATTTCTACAGAAGAGACGCCTA 59.468 44.000 5.12 0.00 35.05 3.93
571 663 5.916661 ATTTCTACAGAAGAGACGCCTAA 57.083 39.130 0.00 0.00 35.05 2.69
572 664 4.698583 TTCTACAGAAGAGACGCCTAAC 57.301 45.455 0.00 0.00 35.05 2.34
573 665 3.015327 TCTACAGAAGAGACGCCTAACC 58.985 50.000 0.00 0.00 0.00 2.85
574 666 1.629043 ACAGAAGAGACGCCTAACCA 58.371 50.000 0.00 0.00 0.00 3.67
575 667 1.968493 ACAGAAGAGACGCCTAACCAA 59.032 47.619 0.00 0.00 0.00 3.67
576 668 2.367567 ACAGAAGAGACGCCTAACCAAA 59.632 45.455 0.00 0.00 0.00 3.28
577 669 2.737252 CAGAAGAGACGCCTAACCAAAC 59.263 50.000 0.00 0.00 0.00 2.93
578 670 2.367567 AGAAGAGACGCCTAACCAAACA 59.632 45.455 0.00 0.00 0.00 2.83
579 671 3.008049 AGAAGAGACGCCTAACCAAACAT 59.992 43.478 0.00 0.00 0.00 2.71
580 672 3.418684 AGAGACGCCTAACCAAACATT 57.581 42.857 0.00 0.00 0.00 2.71
581 673 3.751518 AGAGACGCCTAACCAAACATTT 58.248 40.909 0.00 0.00 0.00 2.32
582 674 4.901868 AGAGACGCCTAACCAAACATTTA 58.098 39.130 0.00 0.00 0.00 1.40
583 675 5.497474 AGAGACGCCTAACCAAACATTTAT 58.503 37.500 0.00 0.00 0.00 1.40
584 676 5.585047 AGAGACGCCTAACCAAACATTTATC 59.415 40.000 0.00 0.00 0.00 1.75
585 677 4.638865 AGACGCCTAACCAAACATTTATCC 59.361 41.667 0.00 0.00 0.00 2.59
586 678 4.595986 ACGCCTAACCAAACATTTATCCT 58.404 39.130 0.00 0.00 0.00 3.24
587 679 4.398044 ACGCCTAACCAAACATTTATCCTG 59.602 41.667 0.00 0.00 0.00 3.86
588 680 4.398044 CGCCTAACCAAACATTTATCCTGT 59.602 41.667 0.00 0.00 0.00 4.00
687 784 3.738281 GCTATGACGGCACTCTTACACAT 60.738 47.826 0.00 0.00 0.00 3.21
690 787 4.260139 TGACGGCACTCTTACACATAAA 57.740 40.909 0.00 0.00 0.00 1.40
715 815 4.792068 GGATCCATCCAACTAAACATCCA 58.208 43.478 6.95 0.00 46.38 3.41
718 818 3.053693 TCCATCCAACTAAACATCCAGGG 60.054 47.826 0.00 0.00 0.00 4.45
719 819 3.309121 CCATCCAACTAAACATCCAGGGT 60.309 47.826 0.00 0.00 0.00 4.34
720 820 3.433306 TCCAACTAAACATCCAGGGTG 57.567 47.619 0.00 0.00 0.00 4.61
721 821 2.983192 TCCAACTAAACATCCAGGGTGA 59.017 45.455 6.75 0.00 0.00 4.02
722 822 3.009033 TCCAACTAAACATCCAGGGTGAG 59.991 47.826 6.75 0.00 0.00 3.51
723 823 3.244911 CCAACTAAACATCCAGGGTGAGT 60.245 47.826 6.75 0.00 0.00 3.41
746 846 2.175878 AAGCAGGACACAGCTACAAG 57.824 50.000 0.00 0.00 38.64 3.16
772 872 0.102300 TGTCCGTGTCCATATCAGCG 59.898 55.000 0.00 0.00 0.00 5.18
773 873 0.102481 GTCCGTGTCCATATCAGCGT 59.898 55.000 0.00 0.00 0.00 5.07
798 898 2.940890 TTTCAGCCCGGATCGCCATC 62.941 60.000 0.73 0.00 0.00 3.51
933 1104 3.946907 CGCTTCGGTTCGGAACTT 58.053 55.556 19.40 0.00 0.00 2.66
934 1105 1.779683 CGCTTCGGTTCGGAACTTC 59.220 57.895 19.40 4.18 0.00 3.01
935 1106 1.779683 GCTTCGGTTCGGAACTTCG 59.220 57.895 19.40 15.21 0.00 3.79
936 1107 1.623973 GCTTCGGTTCGGAACTTCGG 61.624 60.000 19.40 9.60 0.00 4.30
937 1108 0.038892 CTTCGGTTCGGAACTTCGGA 60.039 55.000 19.40 10.01 0.00 4.55
938 1109 0.604578 TTCGGTTCGGAACTTCGGAT 59.395 50.000 19.40 0.00 0.00 4.18
939 1110 0.604578 TCGGTTCGGAACTTCGGATT 59.395 50.000 19.40 0.00 0.00 3.01
989 1166 0.174845 TAGACGGACGCCAATCCAAG 59.825 55.000 0.00 0.00 38.87 3.61
995 1172 1.970917 GACGCCAATCCAAGCACGAG 61.971 60.000 0.00 0.00 0.00 4.18
999 1176 1.651240 CCAATCCAAGCACGAGCCAG 61.651 60.000 0.00 0.00 43.56 4.85
1029 1208 2.028876 CGGTTTCAACCCTCACCTTTT 58.971 47.619 3.02 0.00 46.53 2.27
1052 1233 0.326927 GAATTCCACCTCCCCGAACA 59.673 55.000 0.00 0.00 0.00 3.18
1174 1363 3.525545 GAGTACGGGCGGGAGGAC 61.526 72.222 0.00 0.00 0.00 3.85
1494 1695 0.178998 CTCATAGCATTGGCCTGCCT 60.179 55.000 13.08 4.18 43.33 4.75
1506 1707 0.393537 GCCTGCCTCTGCACAACTAT 60.394 55.000 0.00 0.00 44.23 2.12
1519 1720 4.881273 TGCACAACTATACTAGCCAATTGG 59.119 41.667 20.81 20.81 38.53 3.16
1568 1771 1.101635 GGGGGCGATTGTAAGCTTCC 61.102 60.000 0.00 0.00 0.00 3.46
1593 1796 2.481952 GCGGAGATTTATGGATGCAGAC 59.518 50.000 0.00 0.00 0.00 3.51
1626 1829 3.288092 GGCGGAATTTTGAGGGATTACT 58.712 45.455 0.00 0.00 0.00 2.24
1647 1850 6.674694 ACTTGTGATGACTATGCTGAAATC 57.325 37.500 0.00 0.00 0.00 2.17
1660 1863 6.949117 ATGCTGAAATCCTATCCTATGAGT 57.051 37.500 0.00 0.00 0.00 3.41
1688 1891 5.581085 AGTCGACATGGTTAAATGAGCTAAC 59.419 40.000 19.50 0.00 0.00 2.34
1735 1938 5.663456 TCAAAAGCTTCTGCAACTTTTCAT 58.337 33.333 0.00 0.00 40.63 2.57
1736 1939 5.750067 TCAAAAGCTTCTGCAACTTTTCATC 59.250 36.000 0.00 0.00 40.63 2.92
1737 1940 4.924305 AAGCTTCTGCAACTTTTCATCA 57.076 36.364 0.00 0.00 42.74 3.07
1740 1943 4.765856 AGCTTCTGCAACTTTTCATCAGAT 59.234 37.500 0.00 0.00 42.74 2.90
1832 2035 7.744733 TGAATCCATGCTAGATAACATTGGTA 58.255 34.615 0.00 0.00 0.00 3.25
1849 2053 6.830324 ACATTGGTAGTAATGATCATGTTGCT 59.170 34.615 9.46 6.92 39.79 3.91
1918 2129 9.971922 GTTCATGGAAATCATATAGGGAAAAAG 57.028 33.333 0.00 0.00 34.12 2.27
1962 2175 1.883638 GCCTGTGTTCTGATGCCTTCA 60.884 52.381 0.00 0.00 0.00 3.02
1979 2192 4.631813 GCCTTCATCATCCACGTATATTCC 59.368 45.833 0.00 0.00 0.00 3.01
2003 2216 5.760253 CGTCTCTACAAATGCCATATCCTTT 59.240 40.000 0.00 0.00 0.00 3.11
2004 2217 6.929049 CGTCTCTACAAATGCCATATCCTTTA 59.071 38.462 0.00 0.00 0.00 1.85
2005 2218 7.604164 CGTCTCTACAAATGCCATATCCTTTAT 59.396 37.037 0.00 0.00 0.00 1.40
2006 2219 8.725148 GTCTCTACAAATGCCATATCCTTTATG 58.275 37.037 0.00 0.00 0.00 1.90
2007 2220 8.439971 TCTCTACAAATGCCATATCCTTTATGT 58.560 33.333 0.00 0.00 0.00 2.29
2008 2221 8.995027 TCTACAAATGCCATATCCTTTATGTT 57.005 30.769 0.00 0.00 0.00 2.71
2009 2222 8.849168 TCTACAAATGCCATATCCTTTATGTTG 58.151 33.333 0.00 0.00 0.00 3.33
2010 2223 6.819284 ACAAATGCCATATCCTTTATGTTGG 58.181 36.000 0.00 0.00 0.00 3.77
2011 2224 5.473066 AATGCCATATCCTTTATGTTGGC 57.527 39.130 4.83 4.83 43.46 4.52
2013 2226 3.636300 TGCCATATCCTTTATGTTGGCAC 59.364 43.478 10.18 0.00 45.72 5.01
2014 2227 3.005791 GCCATATCCTTTATGTTGGCACC 59.994 47.826 6.86 0.00 43.03 5.01
2015 2228 3.573967 CCATATCCTTTATGTTGGCACCC 59.426 47.826 0.00 0.00 0.00 4.61
2016 2229 2.159179 ATCCTTTATGTTGGCACCCC 57.841 50.000 0.00 0.00 0.00 4.95
2017 2230 1.080638 TCCTTTATGTTGGCACCCCT 58.919 50.000 0.00 0.00 0.00 4.79
2018 2231 2.280103 TCCTTTATGTTGGCACCCCTA 58.720 47.619 0.00 0.00 0.00 3.53
2019 2232 2.025699 TCCTTTATGTTGGCACCCCTAC 60.026 50.000 0.00 0.00 37.37 3.18
2020 2233 2.025321 CCTTTATGTTGGCACCCCTACT 60.025 50.000 0.00 0.00 37.68 2.57
2021 2234 3.201266 CCTTTATGTTGGCACCCCTACTA 59.799 47.826 0.00 0.00 37.68 1.82
2022 2235 4.324719 CCTTTATGTTGGCACCCCTACTAA 60.325 45.833 0.00 0.00 37.68 2.24
2023 2236 5.445964 CTTTATGTTGGCACCCCTACTAAT 58.554 41.667 0.00 0.00 37.68 1.73
2024 2237 3.577805 ATGTTGGCACCCCTACTAATC 57.422 47.619 0.00 0.00 37.68 1.75
2025 2238 2.557869 TGTTGGCACCCCTACTAATCT 58.442 47.619 0.00 0.00 37.68 2.40
2026 2239 3.726790 TGTTGGCACCCCTACTAATCTA 58.273 45.455 0.00 0.00 37.68 1.98
2027 2240 4.303794 TGTTGGCACCCCTACTAATCTAT 58.696 43.478 0.00 0.00 37.68 1.98
2028 2241 4.724798 TGTTGGCACCCCTACTAATCTATT 59.275 41.667 0.00 0.00 37.68 1.73
2029 2242 4.974645 TGGCACCCCTACTAATCTATTG 57.025 45.455 0.00 0.00 0.00 1.90
2030 2243 4.303794 TGGCACCCCTACTAATCTATTGT 58.696 43.478 0.00 0.00 0.00 2.71
2031 2244 4.347000 TGGCACCCCTACTAATCTATTGTC 59.653 45.833 0.00 0.00 0.00 3.18
2032 2245 4.347000 GGCACCCCTACTAATCTATTGTCA 59.653 45.833 0.00 0.00 0.00 3.58
2033 2246 5.163237 GGCACCCCTACTAATCTATTGTCAA 60.163 44.000 0.00 0.00 0.00 3.18
2034 2247 6.354130 GCACCCCTACTAATCTATTGTCAAA 58.646 40.000 0.00 0.00 0.00 2.69
2035 2248 6.998673 GCACCCCTACTAATCTATTGTCAAAT 59.001 38.462 0.00 0.00 0.00 2.32
2036 2249 7.041098 GCACCCCTACTAATCTATTGTCAAATG 60.041 40.741 0.00 0.00 0.00 2.32
2037 2250 6.998673 ACCCCTACTAATCTATTGTCAAATGC 59.001 38.462 0.00 0.00 0.00 3.56
2038 2251 6.431234 CCCCTACTAATCTATTGTCAAATGCC 59.569 42.308 0.00 0.00 0.00 4.40
2039 2252 6.998074 CCCTACTAATCTATTGTCAAATGCCA 59.002 38.462 0.00 0.00 0.00 4.92
2040 2253 7.667219 CCCTACTAATCTATTGTCAAATGCCAT 59.333 37.037 0.00 0.00 0.00 4.40
2041 2254 9.725019 CCTACTAATCTATTGTCAAATGCCATA 57.275 33.333 0.00 0.00 0.00 2.74
2273 2530 4.095036 GCAATTGCTTTAGACCCTCAGTAC 59.905 45.833 23.21 0.00 38.21 2.73
2348 2605 2.291741 GCTGACAAAGAAGAGTTGGGTG 59.708 50.000 0.00 0.00 0.00 4.61
2371 2628 4.217550 GTCAGGCTATAACAAAAAGGTGCA 59.782 41.667 0.00 0.00 0.00 4.57
2373 2630 3.509967 AGGCTATAACAAAAAGGTGCACC 59.490 43.478 29.22 29.22 0.00 5.01
2388 2646 3.620488 GTGCACCTTCATTCTTGGGATA 58.380 45.455 5.22 0.00 0.00 2.59
2395 2653 7.706607 GCACCTTCATTCTTGGGATAAAAATAC 59.293 37.037 0.00 0.00 0.00 1.89
2404 2662 9.627123 TTCTTGGGATAAAAATACGATCTGATT 57.373 29.630 0.00 0.00 0.00 2.57
2441 2699 5.552870 AATGGCTGTTATCTCGTATCCTT 57.447 39.130 0.00 0.00 0.00 3.36
2442 2700 6.665992 AATGGCTGTTATCTCGTATCCTTA 57.334 37.500 0.00 0.00 0.00 2.69
2443 2701 6.859112 ATGGCTGTTATCTCGTATCCTTAT 57.141 37.500 0.00 0.00 0.00 1.73
2444 2702 6.268825 TGGCTGTTATCTCGTATCCTTATC 57.731 41.667 0.00 0.00 0.00 1.75
2470 2743 2.046892 CTGCGTGAGGGTGAAGGG 60.047 66.667 0.00 0.00 0.00 3.95
2602 2875 2.216148 AGGAATTCCTCGGCCAGAG 58.784 57.895 21.89 15.17 44.77 3.35
2695 2968 5.411977 CAGCTCAGTTTGAACATCTCAATCT 59.588 40.000 0.00 0.00 43.64 2.40
2706 2979 5.426689 ACATCTCAATCTGGTTAGCAGAA 57.573 39.130 18.17 1.65 31.89 3.02
2823 3179 0.940126 GGTCACACAGTGCAAGACAG 59.060 55.000 18.00 0.00 32.98 3.51
2851 3215 7.255801 GGATGTTGACCAAAACAAGAGGAATAA 60.256 37.037 0.00 0.00 42.98 1.40
2852 3216 7.038154 TGTTGACCAAAACAAGAGGAATAAG 57.962 36.000 0.00 0.00 37.12 1.73
2854 3218 7.340743 TGTTGACCAAAACAAGAGGAATAAGAA 59.659 33.333 0.00 0.00 37.12 2.52
2855 3219 8.360390 GTTGACCAAAACAAGAGGAATAAGAAT 58.640 33.333 0.00 0.00 0.00 2.40
2856 3220 7.885297 TGACCAAAACAAGAGGAATAAGAATG 58.115 34.615 0.00 0.00 0.00 2.67
2857 3221 7.505585 TGACCAAAACAAGAGGAATAAGAATGT 59.494 33.333 0.00 0.00 0.00 2.71
2858 3222 7.886338 ACCAAAACAAGAGGAATAAGAATGTC 58.114 34.615 0.00 0.00 0.00 3.06
2937 3323 3.882102 AAGGATATATGCACCTTGCCA 57.118 42.857 7.02 0.00 44.23 4.92
2939 3325 2.713167 AGGATATATGCACCTTGCCACT 59.287 45.455 7.02 0.00 44.23 4.00
2956 3342 1.328680 CACTCGGCATATGACTTGCAC 59.671 52.381 6.97 0.00 41.95 4.57
2964 3350 3.310774 GCATATGACTTGCACGACAGATT 59.689 43.478 6.97 0.00 39.90 2.40
2965 3351 4.784394 GCATATGACTTGCACGACAGATTG 60.784 45.833 6.97 0.00 39.90 2.67
2987 3373 4.639755 TGCATGGAAACTGTACATACATGG 59.360 41.667 17.82 0.00 35.88 3.66
3004 3390 7.286087 ACATACATGGTTGCATACTGATTGATT 59.714 33.333 0.00 0.00 0.00 2.57
3009 3395 6.397272 TGGTTGCATACTGATTGATTTTTCC 58.603 36.000 0.00 0.00 0.00 3.13
3086 3472 4.201891 GCTGCAATTCGAACAGATTCATCT 60.202 41.667 16.09 0.00 37.72 2.90
3113 3499 3.760684 GACTCAATGGAATGCAAAGGAGT 59.239 43.478 6.16 6.16 37.10 3.85
3119 3505 6.436847 TCAATGGAATGCAAAGGAGTATTTCA 59.563 34.615 0.00 0.00 34.31 2.69
3505 3891 0.179020 TCAGGTTTGGTGGACTGCTG 60.179 55.000 0.00 0.00 0.00 4.41
3762 4148 8.911662 GCCAATGGTTATTTATAAAGCGTTATG 58.088 33.333 14.24 0.00 33.16 1.90
3763 4149 9.959749 CCAATGGTTATTTATAAAGCGTTATGT 57.040 29.630 14.24 4.18 33.16 2.29
3935 4321 5.869579 ACTGAGCTTCTTGATGAGGTAAAA 58.130 37.500 0.00 0.00 0.00 1.52
3944 4330 7.031226 TCTTGATGAGGTAAAATAGCAATGC 57.969 36.000 0.00 0.00 0.00 3.56
4008 4394 2.234661 TGTCTGATGACGAGGATGCTTT 59.765 45.455 0.00 0.00 45.70 3.51
4009 4395 3.265791 GTCTGATGACGAGGATGCTTTT 58.734 45.455 0.00 0.00 33.15 2.27
4010 4396 4.081697 TGTCTGATGACGAGGATGCTTTTA 60.082 41.667 0.00 0.00 45.70 1.52
4011 4397 5.053145 GTCTGATGACGAGGATGCTTTTAT 58.947 41.667 0.00 0.00 33.15 1.40
4012 4398 5.525378 GTCTGATGACGAGGATGCTTTTATT 59.475 40.000 0.00 0.00 33.15 1.40
4013 4399 6.037610 GTCTGATGACGAGGATGCTTTTATTT 59.962 38.462 0.00 0.00 33.15 1.40
4014 4400 7.224753 GTCTGATGACGAGGATGCTTTTATTTA 59.775 37.037 0.00 0.00 33.15 1.40
4040 4426 9.660544 ATTTATTAGGAACCTAGAAATTGGCAT 57.339 29.630 12.78 1.49 29.43 4.40
4041 4427 8.691661 TTATTAGGAACCTAGAAATTGGCATC 57.308 34.615 0.00 0.00 0.00 3.91
4042 4428 4.870021 AGGAACCTAGAAATTGGCATCT 57.130 40.909 0.00 0.00 0.00 2.90
4044 4430 5.583932 AGGAACCTAGAAATTGGCATCTTT 58.416 37.500 0.00 0.00 0.00 2.52
4045 4431 6.731467 AGGAACCTAGAAATTGGCATCTTTA 58.269 36.000 0.00 0.00 0.00 1.85
4046 4432 7.182060 AGGAACCTAGAAATTGGCATCTTTAA 58.818 34.615 0.00 0.00 0.00 1.52
4047 4433 7.340487 AGGAACCTAGAAATTGGCATCTTTAAG 59.660 37.037 0.00 0.00 0.00 1.85
4048 4434 7.410120 AACCTAGAAATTGGCATCTTTAAGG 57.590 36.000 15.34 15.34 0.00 2.69
4049 4435 6.731467 ACCTAGAAATTGGCATCTTTAAGGA 58.269 36.000 19.83 0.00 0.00 3.36
4051 4437 5.588958 AGAAATTGGCATCTTTAAGGAGC 57.411 39.130 0.00 0.00 0.00 4.70
4052 4438 4.403752 AGAAATTGGCATCTTTAAGGAGCC 59.596 41.667 17.32 17.32 45.41 4.70
4055 4441 2.426842 GGCATCTTTAAGGAGCCAGT 57.573 50.000 18.60 0.00 44.59 4.00
4056 4442 3.560636 GGCATCTTTAAGGAGCCAGTA 57.439 47.619 18.60 0.00 44.59 2.74
4057 4443 4.092116 GGCATCTTTAAGGAGCCAGTAT 57.908 45.455 18.60 0.00 44.59 2.12
4058 4444 4.464947 GGCATCTTTAAGGAGCCAGTATT 58.535 43.478 18.60 0.00 44.59 1.89
4059 4445 5.621193 GGCATCTTTAAGGAGCCAGTATTA 58.379 41.667 18.60 0.00 44.59 0.98
4060 4446 5.470437 GGCATCTTTAAGGAGCCAGTATTAC 59.530 44.000 18.60 0.00 44.59 1.89
4061 4447 5.177696 GCATCTTTAAGGAGCCAGTATTACG 59.822 44.000 0.00 0.00 0.00 3.18
4062 4448 5.927281 TCTTTAAGGAGCCAGTATTACGT 57.073 39.130 0.00 0.00 0.00 3.57
4063 4449 6.290294 TCTTTAAGGAGCCAGTATTACGTT 57.710 37.500 0.00 0.00 0.00 3.99
4064 4450 6.103997 TCTTTAAGGAGCCAGTATTACGTTG 58.896 40.000 0.00 0.00 0.00 4.10
4065 4451 2.981859 AGGAGCCAGTATTACGTTGG 57.018 50.000 0.00 0.00 35.06 3.77
4066 4452 2.185387 AGGAGCCAGTATTACGTTGGT 58.815 47.619 5.18 0.00 34.43 3.67
4067 4453 2.570302 AGGAGCCAGTATTACGTTGGTT 59.430 45.455 5.18 0.00 34.43 3.67
4068 4454 2.676342 GGAGCCAGTATTACGTTGGTTG 59.324 50.000 5.18 0.00 34.43 3.77
4069 4455 3.332034 GAGCCAGTATTACGTTGGTTGT 58.668 45.455 5.18 0.00 34.43 3.32
4070 4456 3.071479 AGCCAGTATTACGTTGGTTGTG 58.929 45.455 5.18 0.00 34.43 3.33
4071 4457 2.809696 GCCAGTATTACGTTGGTTGTGT 59.190 45.455 5.18 0.00 34.43 3.72
4072 4458 3.251487 GCCAGTATTACGTTGGTTGTGTT 59.749 43.478 5.18 0.00 34.43 3.32
4073 4459 4.612033 GCCAGTATTACGTTGGTTGTGTTC 60.612 45.833 5.18 0.00 34.43 3.18
4074 4460 4.512198 CCAGTATTACGTTGGTTGTGTTCA 59.488 41.667 0.00 0.00 0.00 3.18
4075 4461 5.437263 CAGTATTACGTTGGTTGTGTTCAC 58.563 41.667 0.00 0.00 0.00 3.18
4076 4462 5.235616 CAGTATTACGTTGGTTGTGTTCACT 59.764 40.000 0.00 0.00 0.00 3.41
4077 4463 4.806342 ATTACGTTGGTTGTGTTCACTC 57.194 40.909 0.00 0.00 0.00 3.51
4078 4464 2.396590 ACGTTGGTTGTGTTCACTCT 57.603 45.000 4.59 0.00 0.00 3.24
4079 4465 3.530265 ACGTTGGTTGTGTTCACTCTA 57.470 42.857 4.59 0.00 0.00 2.43
4080 4466 4.067972 ACGTTGGTTGTGTTCACTCTAT 57.932 40.909 4.59 0.00 0.00 1.98
4081 4467 4.448210 ACGTTGGTTGTGTTCACTCTATT 58.552 39.130 4.59 0.00 0.00 1.73
4082 4468 4.272504 ACGTTGGTTGTGTTCACTCTATTG 59.727 41.667 4.59 0.00 0.00 1.90
4083 4469 4.272504 CGTTGGTTGTGTTCACTCTATTGT 59.727 41.667 4.59 0.00 0.00 2.71
4084 4470 5.220777 CGTTGGTTGTGTTCACTCTATTGTT 60.221 40.000 4.59 0.00 0.00 2.83
4085 4471 5.749596 TGGTTGTGTTCACTCTATTGTTG 57.250 39.130 4.59 0.00 0.00 3.33
4086 4472 5.432645 TGGTTGTGTTCACTCTATTGTTGA 58.567 37.500 4.59 0.00 0.00 3.18
4087 4473 5.295787 TGGTTGTGTTCACTCTATTGTTGAC 59.704 40.000 4.59 0.00 0.00 3.18
4088 4474 5.277828 GGTTGTGTTCACTCTATTGTTGACC 60.278 44.000 4.59 0.00 0.00 4.02
4089 4475 5.290493 TGTGTTCACTCTATTGTTGACCT 57.710 39.130 4.59 0.00 0.00 3.85
4090 4476 5.297547 TGTGTTCACTCTATTGTTGACCTC 58.702 41.667 4.59 0.00 0.00 3.85
4091 4477 5.163353 TGTGTTCACTCTATTGTTGACCTCA 60.163 40.000 4.59 0.00 0.00 3.86
4092 4478 5.934625 GTGTTCACTCTATTGTTGACCTCAT 59.065 40.000 0.00 0.00 0.00 2.90
4093 4479 5.934043 TGTTCACTCTATTGTTGACCTCATG 59.066 40.000 0.00 0.00 0.00 3.07
4094 4480 5.745312 TCACTCTATTGTTGACCTCATGT 57.255 39.130 0.00 0.00 0.00 3.21
4095 4481 6.850752 TCACTCTATTGTTGACCTCATGTA 57.149 37.500 0.00 0.00 0.00 2.29
4096 4482 6.631016 TCACTCTATTGTTGACCTCATGTAC 58.369 40.000 0.00 0.00 0.00 2.90
4097 4483 6.210584 TCACTCTATTGTTGACCTCATGTACA 59.789 38.462 0.00 0.00 0.00 2.90
4098 4484 6.873605 CACTCTATTGTTGACCTCATGTACAA 59.126 38.462 0.00 0.00 31.30 2.41
4099 4485 6.874134 ACTCTATTGTTGACCTCATGTACAAC 59.126 38.462 0.00 14.64 41.64 3.32
4242 4635 5.417580 GCTAAGGTGACCATAACATTGGAAA 59.582 40.000 3.63 0.00 39.25 3.13
4272 4665 3.932710 TGAGACGCTGAAATACATGTTCC 59.067 43.478 2.30 0.00 0.00 3.62
4333 4726 9.853921 CAATTCATTTTTCAGAAAGTTGTAAGC 57.146 29.630 0.00 0.00 0.00 3.09
4350 4743 6.804770 TGTAAGCGTGTTATGTTTAACCAT 57.195 33.333 0.00 0.00 37.49 3.55
4775 5171 3.133721 AGAATCCACAGCTGAGTGATACC 59.866 47.826 23.35 12.95 42.05 2.73
4808 5204 8.255111 AGGTACCTGTACTAGTTTTTGTTAGT 57.745 34.615 15.42 0.00 36.36 2.24
5010 5406 5.536538 GGAATCATTCCTATGGAACTTTCCC 59.463 44.000 9.43 8.32 45.07 3.97
5040 5436 8.811017 TCTATTTGGTAGGAAATTTTGCATGAA 58.189 29.630 0.00 0.00 0.00 2.57
5044 5440 7.243604 TGGTAGGAAATTTTGCATGAATTCT 57.756 32.000 7.05 6.03 0.00 2.40
5089 5485 2.653726 TCCATCAAACACACACTTGCT 58.346 42.857 0.00 0.00 0.00 3.91
5169 5565 7.065504 CCTCCATTTTTCCTATCCTCTGAATT 58.934 38.462 0.00 0.00 0.00 2.17
5198 5594 5.767670 AGCCCTTAGTCAGTAAGATAGTGA 58.232 41.667 0.27 0.00 40.79 3.41
5208 5604 4.025061 CAGTAAGATAGTGAATGCAGCTGC 60.025 45.833 31.89 31.89 42.50 5.25
5209 5605 3.278668 AAGATAGTGAATGCAGCTGCT 57.721 42.857 36.61 20.34 42.66 4.24
5269 5665 0.177604 ACTGCTAGAGCTGCATGGTC 59.822 55.000 1.02 7.11 42.72 4.02
5287 5683 1.130561 GTCGGTTCAGCATTAGCAACC 59.869 52.381 0.00 0.00 45.49 3.77
5374 5771 4.329545 GTGTTCGGCCCCTGCTCA 62.330 66.667 0.00 0.00 37.74 4.26
5525 5922 6.716934 TGACTACAATAAAAAGTTGGCCAA 57.283 33.333 16.05 16.05 0.00 4.52
5594 5991 3.493877 GCTCAATTCCTCATCGATGACTG 59.506 47.826 23.99 17.20 32.50 3.51
5595 5992 4.056740 CTCAATTCCTCATCGATGACTGG 58.943 47.826 23.99 22.82 32.50 4.00
5620 6017 4.018779 TCATTAAAAGAGGTGGGTCGGAAT 60.019 41.667 0.00 0.00 0.00 3.01
5772 6169 5.648526 TCTCTCTTCGCTGAAGTAAGTACAT 59.351 40.000 14.86 0.00 40.24 2.29
5955 6352 5.939447 TGATGCCATTCATGATAAGGTACA 58.061 37.500 0.00 0.00 35.05 2.90
6003 6405 8.876275 AATTATCGCAAGCATTTGATATTTGT 57.124 26.923 0.00 0.00 36.36 2.83
6005 6407 6.817270 ATCGCAAGCATTTGATATTTGTTC 57.183 33.333 0.00 0.00 36.36 3.18
6038 6442 5.495926 TTTGTGGAATTTAATGTGGCCAT 57.504 34.783 9.72 0.00 0.00 4.40
6041 6445 5.971763 TGTGGAATTTAATGTGGCCATAAC 58.028 37.500 9.72 0.00 0.00 1.89
6042 6446 5.040635 GTGGAATTTAATGTGGCCATAACG 58.959 41.667 9.72 0.00 0.00 3.18
6061 6467 8.192774 CCATAACGTAGTCTGTGGTCTAATTTA 58.807 37.037 0.00 0.00 45.00 1.40
6130 6538 6.773638 AGACAAAGTCTTTCACATACTCCAT 58.226 36.000 0.00 0.00 40.28 3.41
6182 6590 7.230108 AGGTTGTCAATCTTATGCTATTGGATG 59.770 37.037 0.00 0.00 34.52 3.51
6190 6598 8.641498 ATCTTATGCTATTGGATGGTAAAAGG 57.359 34.615 0.00 0.00 0.00 3.11
6279 6687 1.525197 TGCGAGTAAAAGTTGCGACAG 59.475 47.619 6.90 0.00 30.37 3.51
6405 6818 8.589338 CATACTATCCCTATATATTGTCTGCCC 58.411 40.741 0.00 0.00 0.00 5.36
6440 6853 3.683564 CGTTTCCCCTATTTCTGTACCCC 60.684 52.174 0.00 0.00 0.00 4.95
6452 6883 1.068741 CTGTACCCCCTTATCTCGTGC 59.931 57.143 0.00 0.00 0.00 5.34
6486 6917 9.490379 CAAACTAGTAACTCCAAACTATCTGTT 57.510 33.333 0.00 0.00 41.29 3.16
6528 6959 3.251729 CGGATTATGAGCCAAGGATGTTG 59.748 47.826 0.00 0.00 0.00 3.33
6589 7021 6.958192 TGACAAGGTCCTAGTCCTAATACTTT 59.042 38.462 0.00 0.00 34.56 2.66
6590 7022 7.456902 TGACAAGGTCCTAGTCCTAATACTTTT 59.543 37.037 0.00 0.00 34.56 2.27
6968 7407 4.371786 TGGTAATCGAATGAGATGTCTGC 58.628 43.478 0.00 0.00 0.00 4.26
6972 7411 6.144724 GGTAATCGAATGAGATGTCTGCTTAC 59.855 42.308 0.00 0.00 0.00 2.34
7141 7580 4.010349 CAAGTATGTTTCCCTGGAAGTCC 58.990 47.826 0.00 0.00 35.38 3.85
7258 7721 7.363205 ACAATTTGTGAAAAACTGACAAAGG 57.637 32.000 0.15 0.00 0.00 3.11
7277 7740 1.005450 GGCACCTCTTAACCCATTCCA 59.995 52.381 0.00 0.00 0.00 3.53
7374 7837 4.686554 ACTATCGAACAGAAACTTCACTGC 59.313 41.667 4.54 0.00 37.61 4.40
7423 7886 4.445448 GGTCAGCCATCTCCATTTCACTAT 60.445 45.833 0.00 0.00 34.09 2.12
7455 7918 7.928167 TGTATCTGTCATCCATCTTACATGTTC 59.072 37.037 2.30 0.00 0.00 3.18
7649 8112 3.007940 TGAAATCCAGAACGAGATGTGGT 59.992 43.478 0.00 0.00 35.34 4.16
7881 8344 1.459592 CAGCCGCCGCATAAGTTATAC 59.540 52.381 0.00 0.00 37.52 1.47
7883 8346 1.725164 GCCGCCGCATAAGTTATACTC 59.275 52.381 0.00 0.00 34.03 2.59
7969 8432 1.372087 GCGCTCTTCTGGGGTTGATG 61.372 60.000 0.00 0.00 0.00 3.07
8054 8517 0.878416 TTCTGTAAATTTGGCGCGCT 59.122 45.000 32.29 12.78 0.00 5.92
8075 8538 3.018423 ACCTGAGTTTGAGCAAGGTTT 57.982 42.857 0.00 0.00 0.00 3.27
8182 8645 7.821846 GGGATGAGCAATTTTATTTTTGGTGTA 59.178 33.333 0.00 0.00 33.99 2.90
8216 8680 7.475771 TGTTTTCCTATTTGCAAACAACATC 57.524 32.000 15.41 2.51 36.44 3.06
8291 8756 6.265577 CCATTTTAATTGACACCGAGATTCC 58.734 40.000 0.00 0.00 0.00 3.01
8294 8759 0.806102 ATTGACACCGAGATTCCGCG 60.806 55.000 0.00 0.00 35.33 6.46
8371 9000 4.856664 TCGAGCAAACCGAGAAGATATAC 58.143 43.478 0.00 0.00 0.00 1.47
8376 9005 6.456501 AGCAAACCGAGAAGATATACCATAC 58.543 40.000 0.00 0.00 0.00 2.39
8484 9147 1.266175 CTGACAACAAGCAAGGCTGAG 59.734 52.381 0.00 0.00 39.62 3.35
8549 9212 1.248486 AGTCTAAGCACTGCTCGTCA 58.752 50.000 3.40 0.00 38.25 4.35
8679 9342 2.124570 CTTGGTCGCCCATGGGAG 60.125 66.667 36.00 31.62 41.49 4.30
8845 9508 1.595109 CAGCACGTGCCAGAAGTCA 60.595 57.895 35.51 0.00 43.38 3.41
8890 9553 1.147600 AAAGGCAAGGTCGTCGGTT 59.852 52.632 0.00 0.00 0.00 4.44
8911 9574 0.321564 CCATGAAGCGAACTGGTGGA 60.322 55.000 0.00 0.00 0.00 4.02
9028 9691 0.879765 ATATAACCCGAGGACGCTCG 59.120 55.000 5.58 5.58 45.43 5.03
9048 9711 5.064071 GCTCGAAAAGAATTTCCTGTAGGAG 59.936 44.000 0.26 0.00 46.36 3.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 8.999431 GTGAAGGAAGTTGTGAGATGTTAATAA 58.001 33.333 0.00 0.00 0.00 1.40
7 8 8.375506 AGTGAAGGAAGTTGTGAGATGTTAATA 58.624 33.333 0.00 0.00 0.00 0.98
10 11 6.174720 AGTGAAGGAAGTTGTGAGATGTTA 57.825 37.500 0.00 0.00 0.00 2.41
11 12 5.041191 AGTGAAGGAAGTTGTGAGATGTT 57.959 39.130 0.00 0.00 0.00 2.71
12 13 4.696479 AGTGAAGGAAGTTGTGAGATGT 57.304 40.909 0.00 0.00 0.00 3.06
13 14 5.278169 CCAAAGTGAAGGAAGTTGTGAGATG 60.278 44.000 0.00 0.00 0.00 2.90
14 15 4.823989 CCAAAGTGAAGGAAGTTGTGAGAT 59.176 41.667 0.00 0.00 0.00 2.75
54 55 2.972348 AGAGAGTGGTTGTCCCTAACA 58.028 47.619 0.00 0.00 35.59 2.41
56 57 3.709587 CCTAGAGAGTGGTTGTCCCTAA 58.290 50.000 0.00 0.00 0.00 2.69
68 69 2.104451 CTGCCATCAATGCCTAGAGAGT 59.896 50.000 0.00 0.00 0.00 3.24
87 168 3.251245 GCAATCATCAAGCTCTGGATCTG 59.749 47.826 0.00 0.00 0.00 2.90
88 169 3.478509 GCAATCATCAAGCTCTGGATCT 58.521 45.455 0.00 0.00 0.00 2.75
91 172 1.744798 CGGCAATCATCAAGCTCTGGA 60.745 52.381 0.00 0.00 0.00 3.86
95 176 0.307146 GCTCGGCAATCATCAAGCTC 59.693 55.000 0.00 0.00 0.00 4.09
98 179 1.091771 ACCGCTCGGCAATCATCAAG 61.092 55.000 8.41 0.00 39.32 3.02
103 184 1.741401 CTTCACCGCTCGGCAATCA 60.741 57.895 8.41 0.00 39.32 2.57
107 188 4.314440 AAGCTTCACCGCTCGGCA 62.314 61.111 8.41 0.00 39.86 5.69
108 189 3.793144 CAAGCTTCACCGCTCGGC 61.793 66.667 8.41 0.00 39.86 5.54
109 190 1.424493 GATCAAGCTTCACCGCTCGG 61.424 60.000 6.79 6.79 39.86 4.63
112 193 1.016130 CGTGATCAAGCTTCACCGCT 61.016 55.000 10.67 0.00 40.29 5.52
122 203 3.499737 GGGCACGGCGTGATCAAG 61.500 66.667 40.94 16.31 35.23 3.02
142 223 0.607489 CTTCCCCTGCCTTGTGACAG 60.607 60.000 0.00 0.00 0.00 3.51
145 226 2.416107 CTGCTTCCCCTGCCTTGTGA 62.416 60.000 0.00 0.00 0.00 3.58
149 230 1.849823 AGTCTGCTTCCCCTGCCTT 60.850 57.895 0.00 0.00 0.00 4.35
164 245 0.818296 ATGTCTACGAGGGTGCAGTC 59.182 55.000 0.00 0.00 0.00 3.51
167 248 0.817654 CTCATGTCTACGAGGGTGCA 59.182 55.000 0.00 0.00 0.00 4.57
174 255 2.696506 ACAGTCGTCTCATGTCTACGA 58.303 47.619 13.26 13.26 42.83 3.43
177 258 3.611766 GCACAACAGTCGTCTCATGTCTA 60.612 47.826 0.00 0.00 0.00 2.59
183 264 0.317854 CGAGCACAACAGTCGTCTCA 60.318 55.000 0.00 0.00 0.00 3.27
191 272 0.599991 TACCAGCACGAGCACAACAG 60.600 55.000 7.77 0.00 45.49 3.16
193 274 0.600255 ACTACCAGCACGAGCACAAC 60.600 55.000 7.77 0.00 45.49 3.32
200 281 1.943968 GCAAATCCACTACCAGCACGA 60.944 52.381 0.00 0.00 0.00 4.35
202 283 0.811281 GGCAAATCCACTACCAGCAC 59.189 55.000 0.00 0.00 34.01 4.40
256 337 8.060075 AGGCCATAAGAGACTAAGAGTAACTTA 58.940 37.037 5.01 0.00 39.72 2.24
281 362 1.341877 TGGCAGGAGAGAGGAGAGAAG 60.342 57.143 0.00 0.00 0.00 2.85
289 370 1.153939 CGACGTTGGCAGGAGAGAG 60.154 63.158 0.00 0.00 0.00 3.20
326 407 1.733402 AAGAGAGATGAGAGGCGGCG 61.733 60.000 0.51 0.51 0.00 6.46
345 426 1.610673 GAGCAGGAGGTGGAGTGGA 60.611 63.158 0.00 0.00 0.00 4.02
359 440 2.094700 ACGAGATAACGAAGCAAGAGCA 60.095 45.455 0.00 0.00 38.99 4.26
367 448 3.127203 AGTGAGGTGACGAGATAACGAAG 59.873 47.826 0.00 0.00 37.03 3.79
369 450 2.676839 GAGTGAGGTGACGAGATAACGA 59.323 50.000 0.00 0.00 37.03 3.85
379 460 5.059833 AGAATGAACAAAGAGTGAGGTGAC 58.940 41.667 0.00 0.00 0.00 3.67
392 473 5.310409 AGTGAAGGAGGAAGAATGAACAA 57.690 39.130 0.00 0.00 0.00 2.83
394 475 5.046231 AGGTAGTGAAGGAGGAAGAATGAAC 60.046 44.000 0.00 0.00 0.00 3.18
398 479 3.198853 GCAGGTAGTGAAGGAGGAAGAAT 59.801 47.826 0.00 0.00 0.00 2.40
410 491 2.290071 GGCCTAGTTTTGCAGGTAGTGA 60.290 50.000 0.00 0.00 34.18 3.41
415 496 2.080654 TTTGGCCTAGTTTTGCAGGT 57.919 45.000 3.32 0.00 34.18 4.00
438 519 6.530019 AGTTTTCCACAAGATCAAAACAGT 57.470 33.333 15.24 0.00 39.95 3.55
439 520 7.832503 AAAGTTTTCCACAAGATCAAAACAG 57.167 32.000 15.24 0.00 39.95 3.16
443 524 6.978080 GTGCTAAAGTTTTCCACAAGATCAAA 59.022 34.615 11.33 0.00 0.00 2.69
448 529 6.770785 ACATAGTGCTAAAGTTTTCCACAAGA 59.229 34.615 16.05 5.94 0.00 3.02
454 535 6.379386 GGTTCACATAGTGCTAAAGTTTTCC 58.621 40.000 0.00 0.00 32.98 3.13
472 554 5.106876 TGTATAAGGCCTAAAGGGTTCAC 57.893 43.478 5.16 0.00 37.43 3.18
480 562 6.655003 GCATCTAGCATTGTATAAGGCCTAAA 59.345 38.462 5.16 0.00 44.22 1.85
502 584 8.747538 AATCCGGTTTACTTTTCTATAAGCAT 57.252 30.769 0.00 0.00 0.00 3.79
516 608 7.746034 CCGTACTTTTAAGAAAATCCGGTTTAC 59.254 37.037 0.00 0.00 33.68 2.01
521 613 6.483687 CATCCGTACTTTTAAGAAAATCCGG 58.516 40.000 0.00 0.00 36.73 5.14
523 615 6.095021 AGGCATCCGTACTTTTAAGAAAATCC 59.905 38.462 0.00 0.00 0.00 3.01
524 616 7.085052 AGGCATCCGTACTTTTAAGAAAATC 57.915 36.000 0.00 0.00 0.00 2.17
531 623 8.259411 TGTAGAAATAGGCATCCGTACTTTTAA 58.741 33.333 0.00 0.00 0.00 1.52
533 625 6.646267 TGTAGAAATAGGCATCCGTACTTTT 58.354 36.000 0.00 0.00 0.00 2.27
534 626 6.097839 TCTGTAGAAATAGGCATCCGTACTTT 59.902 38.462 0.00 0.00 0.00 2.66
535 627 5.597182 TCTGTAGAAATAGGCATCCGTACTT 59.403 40.000 0.00 0.00 0.00 2.24
536 628 5.138276 TCTGTAGAAATAGGCATCCGTACT 58.862 41.667 0.00 0.00 0.00 2.73
537 629 5.449107 TCTGTAGAAATAGGCATCCGTAC 57.551 43.478 0.00 0.00 0.00 3.67
538 630 5.831525 TCTTCTGTAGAAATAGGCATCCGTA 59.168 40.000 0.00 0.00 33.07 4.02
539 631 4.649674 TCTTCTGTAGAAATAGGCATCCGT 59.350 41.667 0.00 0.00 33.07 4.69
540 632 5.010112 TCTCTTCTGTAGAAATAGGCATCCG 59.990 44.000 0.00 0.00 33.07 4.18
541 633 6.220201 GTCTCTTCTGTAGAAATAGGCATCC 58.780 44.000 0.00 0.00 33.07 3.51
542 634 5.918011 CGTCTCTTCTGTAGAAATAGGCATC 59.082 44.000 8.22 0.00 33.07 3.91
543 635 5.737635 GCGTCTCTTCTGTAGAAATAGGCAT 60.738 44.000 8.22 0.00 33.07 4.40
544 636 4.440250 GCGTCTCTTCTGTAGAAATAGGCA 60.440 45.833 8.22 0.00 33.07 4.75
545 637 4.045783 GCGTCTCTTCTGTAGAAATAGGC 58.954 47.826 0.00 0.00 33.07 3.93
546 638 4.339814 AGGCGTCTCTTCTGTAGAAATAGG 59.660 45.833 0.00 0.00 33.07 2.57
547 639 5.508200 AGGCGTCTCTTCTGTAGAAATAG 57.492 43.478 0.00 0.00 33.07 1.73
548 640 6.183360 GGTTAGGCGTCTCTTCTGTAGAAATA 60.183 42.308 0.00 0.00 33.07 1.40
549 641 5.394333 GGTTAGGCGTCTCTTCTGTAGAAAT 60.394 44.000 0.00 0.00 33.07 2.17
550 642 4.082354 GGTTAGGCGTCTCTTCTGTAGAAA 60.082 45.833 0.00 0.00 33.07 2.52
551 643 3.442977 GGTTAGGCGTCTCTTCTGTAGAA 59.557 47.826 0.00 0.00 30.91 2.10
552 644 3.015327 GGTTAGGCGTCTCTTCTGTAGA 58.985 50.000 0.00 0.00 0.00 2.59
553 645 2.753452 TGGTTAGGCGTCTCTTCTGTAG 59.247 50.000 0.00 0.00 0.00 2.74
554 646 2.799017 TGGTTAGGCGTCTCTTCTGTA 58.201 47.619 0.00 0.00 0.00 2.74
555 647 1.629043 TGGTTAGGCGTCTCTTCTGT 58.371 50.000 0.00 0.00 0.00 3.41
556 648 2.737252 GTTTGGTTAGGCGTCTCTTCTG 59.263 50.000 0.00 0.00 0.00 3.02
557 649 2.367567 TGTTTGGTTAGGCGTCTCTTCT 59.632 45.455 0.00 0.00 0.00 2.85
558 650 2.762745 TGTTTGGTTAGGCGTCTCTTC 58.237 47.619 0.00 0.00 0.00 2.87
559 651 2.922740 TGTTTGGTTAGGCGTCTCTT 57.077 45.000 0.00 0.00 0.00 2.85
560 652 3.418684 AATGTTTGGTTAGGCGTCTCT 57.581 42.857 0.00 0.00 0.00 3.10
561 653 5.220796 GGATAAATGTTTGGTTAGGCGTCTC 60.221 44.000 0.00 0.00 0.00 3.36
562 654 4.638865 GGATAAATGTTTGGTTAGGCGTCT 59.361 41.667 0.00 0.00 0.00 4.18
563 655 4.638865 AGGATAAATGTTTGGTTAGGCGTC 59.361 41.667 0.00 0.00 0.00 5.19
564 656 4.398044 CAGGATAAATGTTTGGTTAGGCGT 59.602 41.667 0.00 0.00 0.00 5.68
565 657 4.398044 ACAGGATAAATGTTTGGTTAGGCG 59.602 41.667 0.00 0.00 0.00 5.52
566 658 5.914898 ACAGGATAAATGTTTGGTTAGGC 57.085 39.130 0.00 0.00 0.00 3.93
567 659 7.931578 TGTACAGGATAAATGTTTGGTTAGG 57.068 36.000 0.00 0.00 32.02 2.69
580 672 9.116067 GCACCAATACTTATTTGTACAGGATAA 57.884 33.333 11.17 11.17 0.00 1.75
581 673 8.491134 AGCACCAATACTTATTTGTACAGGATA 58.509 33.333 0.00 0.00 0.00 2.59
582 674 7.346471 AGCACCAATACTTATTTGTACAGGAT 58.654 34.615 0.00 0.00 0.00 3.24
583 675 6.717289 AGCACCAATACTTATTTGTACAGGA 58.283 36.000 0.00 0.00 0.00 3.86
584 676 7.391148 AAGCACCAATACTTATTTGTACAGG 57.609 36.000 0.00 0.00 0.00 4.00
614 706 7.334090 TGCAAGATGCTTAGAGACTAGATTTT 58.666 34.615 0.00 0.00 45.31 1.82
617 709 6.669125 ATGCAAGATGCTTAGAGACTAGAT 57.331 37.500 0.00 0.00 45.31 1.98
618 710 6.127225 ACAATGCAAGATGCTTAGAGACTAGA 60.127 38.462 0.00 0.00 45.31 2.43
619 711 6.047870 ACAATGCAAGATGCTTAGAGACTAG 58.952 40.000 3.78 0.00 45.31 2.57
620 712 5.982356 ACAATGCAAGATGCTTAGAGACTA 58.018 37.500 3.78 0.00 45.31 2.59
622 714 6.857777 ATACAATGCAAGATGCTTAGAGAC 57.142 37.500 3.78 0.00 45.31 3.36
633 730 5.376625 CCTAAGGCCTTATACAATGCAAGA 58.623 41.667 25.37 0.36 0.00 3.02
661 758 0.457851 AGAGTGCCGTCATAGCTGTC 59.542 55.000 0.00 0.00 0.00 3.51
662 759 0.898320 AAGAGTGCCGTCATAGCTGT 59.102 50.000 0.00 0.00 0.00 4.40
663 760 2.159240 TGTAAGAGTGCCGTCATAGCTG 60.159 50.000 0.00 0.00 0.00 4.24
709 809 1.825474 CTTACGACTCACCCTGGATGT 59.175 52.381 0.00 0.00 0.00 3.06
710 810 1.471676 GCTTACGACTCACCCTGGATG 60.472 57.143 0.00 0.00 0.00 3.51
711 811 0.824759 GCTTACGACTCACCCTGGAT 59.175 55.000 0.00 0.00 0.00 3.41
712 812 0.541063 TGCTTACGACTCACCCTGGA 60.541 55.000 0.00 0.00 0.00 3.86
714 814 0.108615 CCTGCTTACGACTCACCCTG 60.109 60.000 0.00 0.00 0.00 4.45
715 815 0.251653 TCCTGCTTACGACTCACCCT 60.252 55.000 0.00 0.00 0.00 4.34
718 818 1.000607 TGTGTCCTGCTTACGACTCAC 60.001 52.381 0.00 0.00 29.99 3.51
719 819 1.269723 CTGTGTCCTGCTTACGACTCA 59.730 52.381 0.00 0.00 33.03 3.41
720 820 1.983972 CTGTGTCCTGCTTACGACTC 58.016 55.000 0.00 0.00 0.00 3.36
721 821 0.038159 GCTGTGTCCTGCTTACGACT 60.038 55.000 0.00 0.00 33.16 4.18
722 822 0.038159 AGCTGTGTCCTGCTTACGAC 60.038 55.000 0.00 0.00 42.53 4.34
723 823 1.201647 GTAGCTGTGTCCTGCTTACGA 59.798 52.381 0.00 0.00 42.53 3.43
772 872 3.120304 GCGATCCGGGCTGAAATTAATAC 60.120 47.826 0.00 0.00 0.00 1.89
773 873 3.071479 GCGATCCGGGCTGAAATTAATA 58.929 45.455 0.00 0.00 0.00 0.98
838 1008 2.734723 CGCGTCCAGTGGTCAGTG 60.735 66.667 9.54 4.85 0.00 3.66
886 1057 1.139455 ACAAAAAGGGAGAACGGTCGA 59.861 47.619 0.00 0.00 0.00 4.20
932 1103 3.454375 GCCTTGACTTCGATAATCCGAA 58.546 45.455 0.00 0.00 45.01 4.30
933 1104 2.223971 GGCCTTGACTTCGATAATCCGA 60.224 50.000 0.00 0.00 36.70 4.55
934 1105 2.135933 GGCCTTGACTTCGATAATCCG 58.864 52.381 0.00 0.00 0.00 4.18
935 1106 2.135933 CGGCCTTGACTTCGATAATCC 58.864 52.381 0.00 0.00 0.00 3.01
936 1107 2.822764 ACGGCCTTGACTTCGATAATC 58.177 47.619 0.00 0.00 0.00 1.75
937 1108 2.981859 ACGGCCTTGACTTCGATAAT 57.018 45.000 0.00 0.00 0.00 1.28
938 1109 3.514645 GTTACGGCCTTGACTTCGATAA 58.485 45.455 0.00 0.00 0.00 1.75
939 1110 2.478370 CGTTACGGCCTTGACTTCGATA 60.478 50.000 0.00 0.00 0.00 2.92
989 1166 0.591170 TAAAAAGTGCTGGCTCGTGC 59.409 50.000 0.00 0.00 38.76 5.34
995 1172 2.223618 TGAAACCGTAAAAAGTGCTGGC 60.224 45.455 0.00 0.00 0.00 4.85
1029 1208 2.582436 GGGAGGTGGAATTCGCGA 59.418 61.111 3.71 3.71 0.00 5.87
1093 1282 1.075896 GGACGACATCCTCCTCCCT 60.076 63.158 0.00 0.00 45.22 4.20
1094 1283 2.491022 CGGACGACATCCTCCTCCC 61.491 68.421 0.00 0.00 46.69 4.30
1095 1284 3.121019 CGGACGACATCCTCCTCC 58.879 66.667 0.00 0.00 46.69 4.30
1096 1285 2.413765 GCGGACGACATCCTCCTC 59.586 66.667 0.00 0.00 46.69 3.71
1144 1333 2.120274 TACTCCCCGTCCCCGTTT 59.880 61.111 0.00 0.00 0.00 3.60
1174 1363 0.539438 CCTCCTCCTCCTCATCCTCG 60.539 65.000 0.00 0.00 0.00 4.63
1180 1369 1.292941 CCTCCTCCTCCTCCTCCTCA 61.293 65.000 0.00 0.00 0.00 3.86
1440 1641 1.986757 GAGCAGGCTCTCAGGGACA 60.987 63.158 13.83 0.00 39.80 4.02
1478 1679 0.178998 CAGAGGCAGGCCAATGCTAT 60.179 55.000 15.87 6.02 45.75 2.97
1494 1695 5.614324 ATTGGCTAGTATAGTTGTGCAGA 57.386 39.130 0.00 0.00 41.93 4.26
1519 1720 0.521659 CTCTCGAAACGTCTCTCGCC 60.522 60.000 9.15 0.00 44.19 5.54
1522 1723 0.521659 CCGCTCTCGAAACGTCTCTC 60.522 60.000 0.00 0.00 38.10 3.20
1568 1771 1.462283 CATCCATAAATCTCCGCAGCG 59.538 52.381 8.18 8.18 0.00 5.18
1626 1829 5.748402 AGGATTTCAGCATAGTCATCACAA 58.252 37.500 0.00 0.00 0.00 3.33
1647 1850 4.693566 GTCGACTCTGACTCATAGGATAGG 59.306 50.000 8.70 0.00 35.95 2.57
1660 1863 5.400066 TCATTTAACCATGTCGACTCTGA 57.600 39.130 17.92 0.00 0.00 3.27
1688 1891 6.363577 TGCAGACAGTTTTCACTCTTTTAG 57.636 37.500 0.00 0.00 0.00 1.85
1735 1938 6.878317 AGCAGCTACTGTATTTGTTATCTGA 58.122 36.000 0.00 0.00 33.43 3.27
1736 1939 7.095857 GCTAGCAGCTACTGTATTTGTTATCTG 60.096 40.741 10.63 0.00 38.45 2.90
1737 1940 6.926272 GCTAGCAGCTACTGTATTTGTTATCT 59.074 38.462 10.63 0.00 38.45 1.98
1793 1996 6.379133 AGCATGGATTCAAACAGTAATGATGT 59.621 34.615 0.00 0.00 0.00 3.06
1832 2035 5.007039 CGCTTACAGCAACATGATCATTACT 59.993 40.000 5.16 0.00 42.58 2.24
1918 2129 4.368315 TCACTTCACATATCGCATACCAC 58.632 43.478 0.00 0.00 0.00 4.16
1962 2175 5.010933 AGAGACGGAATATACGTGGATGAT 58.989 41.667 9.74 0.00 45.68 2.45
1971 2184 6.220930 TGGCATTTGTAGAGACGGAATATAC 58.779 40.000 0.00 0.00 0.00 1.47
1979 2192 4.887748 AGGATATGGCATTTGTAGAGACG 58.112 43.478 4.78 0.00 0.00 4.18
2003 2216 4.303794 AGATTAGTAGGGGTGCCAACATA 58.696 43.478 0.00 0.00 0.00 2.29
2004 2217 3.123273 AGATTAGTAGGGGTGCCAACAT 58.877 45.455 0.00 0.00 0.00 2.71
2005 2218 2.557869 AGATTAGTAGGGGTGCCAACA 58.442 47.619 0.00 0.00 0.00 3.33
2006 2219 4.976540 ATAGATTAGTAGGGGTGCCAAC 57.023 45.455 0.00 0.00 0.00 3.77
2007 2220 4.724798 ACAATAGATTAGTAGGGGTGCCAA 59.275 41.667 0.00 0.00 0.00 4.52
2008 2221 4.303794 ACAATAGATTAGTAGGGGTGCCA 58.696 43.478 0.00 0.00 0.00 4.92
2009 2222 4.347000 TGACAATAGATTAGTAGGGGTGCC 59.653 45.833 0.00 0.00 0.00 5.01
2010 2223 5.546621 TGACAATAGATTAGTAGGGGTGC 57.453 43.478 0.00 0.00 0.00 5.01
2011 2224 7.041098 GCATTTGACAATAGATTAGTAGGGGTG 60.041 40.741 0.00 0.00 0.00 4.61
2012 2225 6.998673 GCATTTGACAATAGATTAGTAGGGGT 59.001 38.462 0.00 0.00 0.00 4.95
2013 2226 6.431234 GGCATTTGACAATAGATTAGTAGGGG 59.569 42.308 0.00 0.00 0.00 4.79
2014 2227 6.998074 TGGCATTTGACAATAGATTAGTAGGG 59.002 38.462 0.00 0.00 0.00 3.53
2015 2228 8.627208 ATGGCATTTGACAATAGATTAGTAGG 57.373 34.615 0.00 0.00 36.16 3.18
2027 2240 9.368674 CAACATAAAGAATATGGCATTTGACAA 57.631 29.630 4.78 0.00 36.16 3.18
2028 2241 8.747471 TCAACATAAAGAATATGGCATTTGACA 58.253 29.630 4.78 0.00 37.54 3.58
2029 2242 9.754382 ATCAACATAAAGAATATGGCATTTGAC 57.246 29.630 4.78 0.00 0.00 3.18
2093 2350 2.909006 AGCCTTGATCTCCTTTGACTGA 59.091 45.455 0.00 0.00 0.00 3.41
2273 2530 2.918712 ATCTATTGTTGCTCCGGGAG 57.081 50.000 19.95 19.95 0.00 4.30
2348 2605 4.217550 TGCACCTTTTTGTTATAGCCTGAC 59.782 41.667 0.00 0.00 0.00 3.51
2371 2628 7.832187 TCGTATTTTTATCCCAAGAATGAAGGT 59.168 33.333 0.00 0.00 0.00 3.50
2373 2630 9.884465 GATCGTATTTTTATCCCAAGAATGAAG 57.116 33.333 0.00 0.00 0.00 3.02
2404 2662 4.951715 ACAGCCATTAGAGCAAATTGATCA 59.048 37.500 13.94 0.00 34.77 2.92
2412 2670 4.141937 ACGAGATAACAGCCATTAGAGCAA 60.142 41.667 0.00 0.00 0.00 3.91
2413 2671 3.384789 ACGAGATAACAGCCATTAGAGCA 59.615 43.478 0.00 0.00 0.00 4.26
2441 2699 3.132289 CCCTCACGCAGAACCTAAAGATA 59.868 47.826 0.00 0.00 0.00 1.98
2442 2700 2.093447 CCCTCACGCAGAACCTAAAGAT 60.093 50.000 0.00 0.00 0.00 2.40
2443 2701 1.275291 CCCTCACGCAGAACCTAAAGA 59.725 52.381 0.00 0.00 0.00 2.52
2444 2702 1.002087 ACCCTCACGCAGAACCTAAAG 59.998 52.381 0.00 0.00 0.00 1.85
2470 2743 3.070018 CCACTTCATAGAATGGATCGGC 58.930 50.000 0.00 0.00 33.80 5.54
2602 2875 4.515567 CAGACCAAGTGAGGAAGTAAAACC 59.484 45.833 0.00 0.00 0.00 3.27
2682 2955 5.423015 TCTGCTAACCAGATTGAGATGTTC 58.577 41.667 0.00 0.00 45.44 3.18
2823 3179 4.022849 CCTCTTGTTTTGGTCAACATCCTC 60.023 45.833 0.00 0.00 36.54 3.71
2910 3296 7.338710 GCAAGGTGCATATATCCTTATTCCTA 58.661 38.462 5.31 0.00 44.26 2.94
2937 3323 1.656652 GTGCAAGTCATATGCCGAGT 58.343 50.000 0.00 0.00 43.16 4.18
2939 3325 0.174617 TCGTGCAAGTCATATGCCGA 59.825 50.000 0.00 7.61 43.16 5.54
2956 3342 2.485426 ACAGTTTCCATGCAATCTGTCG 59.515 45.455 7.19 0.00 33.00 4.35
2964 3350 4.639755 CCATGTATGTACAGTTTCCATGCA 59.360 41.667 0.33 0.00 39.92 3.96
2965 3351 4.640201 ACCATGTATGTACAGTTTCCATGC 59.360 41.667 0.33 0.00 39.92 4.06
2987 3373 9.754382 ATATGGAAAAATCAATCAGTATGCAAC 57.246 29.630 0.00 0.00 34.76 4.17
3004 3390 5.046878 ACTGTGTCGTCCTACATATGGAAAA 60.047 40.000 7.80 0.00 35.10 2.29
3009 3395 7.033791 ACTAAAACTGTGTCGTCCTACATATG 58.966 38.462 0.00 0.00 0.00 1.78
3086 3472 3.438216 TGCATTCCATTGAGTCCTTGA 57.562 42.857 0.00 0.00 0.00 3.02
3113 3499 4.898320 TCTCAGAACTTGCTGCTGAAATA 58.102 39.130 0.00 0.00 38.12 1.40
3119 3505 2.926778 ACTTCTCAGAACTTGCTGCT 57.073 45.000 0.00 0.00 35.86 4.24
3505 3891 6.145535 GTGAAGAAATGTCCATTCACTGTTC 58.854 40.000 9.67 0.90 45.09 3.18
3737 4123 9.959749 ACATAACGCTTTATAAATAACCATTGG 57.040 29.630 0.00 0.00 0.00 3.16
3762 4148 7.202526 TGAAGATCACCACAATTTCAGAAAAC 58.797 34.615 0.00 0.00 0.00 2.43
3763 4149 7.345422 TGAAGATCACCACAATTTCAGAAAA 57.655 32.000 0.00 0.00 0.00 2.29
3935 4321 6.780457 ACTAATCAAACTTGGCATTGCTAT 57.220 33.333 8.82 0.00 0.00 2.97
3944 4330 9.226606 TGTACTCCATTTACTAATCAAACTTGG 57.773 33.333 0.00 0.00 0.00 3.61
4014 4400 9.660544 ATGCCAATTTCTAGGTTCCTAATAAAT 57.339 29.630 10.51 10.51 0.00 1.40
4018 4404 6.915786 AGATGCCAATTTCTAGGTTCCTAAT 58.084 36.000 0.12 0.00 0.00 1.73
4036 4422 2.426842 ACTGGCTCCTTAAAGATGCC 57.573 50.000 7.31 7.31 43.49 4.40
4040 4426 5.927281 ACGTAATACTGGCTCCTTAAAGA 57.073 39.130 0.00 0.00 0.00 2.52
4041 4427 5.293569 CCAACGTAATACTGGCTCCTTAAAG 59.706 44.000 0.00 0.00 0.00 1.85
4042 4428 5.180271 CCAACGTAATACTGGCTCCTTAAA 58.820 41.667 0.00 0.00 0.00 1.52
4044 4430 3.770933 ACCAACGTAATACTGGCTCCTTA 59.229 43.478 3.09 0.00 33.19 2.69
4045 4431 2.570302 ACCAACGTAATACTGGCTCCTT 59.430 45.455 3.09 0.00 33.19 3.36
4046 4432 2.185387 ACCAACGTAATACTGGCTCCT 58.815 47.619 3.09 0.00 33.19 3.69
4047 4433 2.676342 CAACCAACGTAATACTGGCTCC 59.324 50.000 3.09 0.00 33.19 4.70
4048 4434 3.124636 CACAACCAACGTAATACTGGCTC 59.875 47.826 3.09 0.00 33.19 4.70
4049 4435 3.071479 CACAACCAACGTAATACTGGCT 58.929 45.455 3.09 0.00 33.19 4.75
4051 4437 4.512198 TGAACACAACCAACGTAATACTGG 59.488 41.667 1.61 1.61 36.24 4.00
4052 4438 5.235616 AGTGAACACAACCAACGTAATACTG 59.764 40.000 7.68 0.00 0.00 2.74
4053 4439 5.362263 AGTGAACACAACCAACGTAATACT 58.638 37.500 7.68 0.00 0.00 2.12
4054 4440 5.464389 AGAGTGAACACAACCAACGTAATAC 59.536 40.000 7.68 0.00 0.00 1.89
4055 4441 5.603596 AGAGTGAACACAACCAACGTAATA 58.396 37.500 7.68 0.00 0.00 0.98
4056 4442 4.448210 AGAGTGAACACAACCAACGTAAT 58.552 39.130 7.68 0.00 0.00 1.89
4057 4443 3.864243 AGAGTGAACACAACCAACGTAA 58.136 40.909 7.68 0.00 0.00 3.18
4058 4444 3.530265 AGAGTGAACACAACCAACGTA 57.470 42.857 7.68 0.00 0.00 3.57
4059 4445 2.396590 AGAGTGAACACAACCAACGT 57.603 45.000 7.68 0.00 0.00 3.99
4060 4446 4.272504 ACAATAGAGTGAACACAACCAACG 59.727 41.667 7.68 0.00 0.00 4.10
4061 4447 5.751243 ACAATAGAGTGAACACAACCAAC 57.249 39.130 7.68 0.00 0.00 3.77
4062 4448 5.883115 TCAACAATAGAGTGAACACAACCAA 59.117 36.000 7.68 0.00 0.00 3.67
4063 4449 5.295787 GTCAACAATAGAGTGAACACAACCA 59.704 40.000 7.68 0.00 0.00 3.67
4064 4450 5.277828 GGTCAACAATAGAGTGAACACAACC 60.278 44.000 7.68 0.00 0.00 3.77
4065 4451 5.527582 AGGTCAACAATAGAGTGAACACAAC 59.472 40.000 7.68 1.67 0.00 3.32
4066 4452 5.680619 AGGTCAACAATAGAGTGAACACAA 58.319 37.500 7.68 0.00 0.00 3.33
4067 4453 5.163353 TGAGGTCAACAATAGAGTGAACACA 60.163 40.000 7.68 0.00 0.00 3.72
4068 4454 5.297547 TGAGGTCAACAATAGAGTGAACAC 58.702 41.667 0.00 0.00 0.00 3.32
4069 4455 5.545063 TGAGGTCAACAATAGAGTGAACA 57.455 39.130 0.00 0.00 0.00 3.18
4070 4456 5.934625 ACATGAGGTCAACAATAGAGTGAAC 59.065 40.000 0.00 0.00 0.00 3.18
4071 4457 6.114187 ACATGAGGTCAACAATAGAGTGAA 57.886 37.500 0.00 0.00 0.00 3.18
4072 4458 5.745312 ACATGAGGTCAACAATAGAGTGA 57.255 39.130 0.00 0.00 0.00 3.41
4073 4459 6.398095 TGTACATGAGGTCAACAATAGAGTG 58.602 40.000 0.00 0.00 0.00 3.51
4074 4460 6.605471 TGTACATGAGGTCAACAATAGAGT 57.395 37.500 0.00 0.00 0.00 3.24
4075 4461 7.099764 AGTTGTACATGAGGTCAACAATAGAG 58.900 38.462 19.59 0.00 38.69 2.43
4076 4462 7.004555 AGTTGTACATGAGGTCAACAATAGA 57.995 36.000 19.59 0.00 38.69 1.98
4077 4463 7.672983 AAGTTGTACATGAGGTCAACAATAG 57.327 36.000 19.59 0.00 38.69 1.73
4078 4464 7.333423 GCTAAGTTGTACATGAGGTCAACAATA 59.667 37.037 19.59 14.15 38.69 1.90
4079 4465 6.149474 GCTAAGTTGTACATGAGGTCAACAAT 59.851 38.462 19.59 13.93 38.69 2.71
4080 4466 5.468746 GCTAAGTTGTACATGAGGTCAACAA 59.531 40.000 19.59 0.00 38.69 2.83
4081 4467 4.994852 GCTAAGTTGTACATGAGGTCAACA 59.005 41.667 19.59 0.00 38.69 3.33
4082 4468 4.392138 GGCTAAGTTGTACATGAGGTCAAC 59.608 45.833 0.00 8.99 37.58 3.18
4083 4469 4.041075 TGGCTAAGTTGTACATGAGGTCAA 59.959 41.667 0.00 0.00 0.00 3.18
4084 4470 3.580895 TGGCTAAGTTGTACATGAGGTCA 59.419 43.478 0.00 0.00 0.00 4.02
4085 4471 4.202245 TGGCTAAGTTGTACATGAGGTC 57.798 45.455 0.00 0.00 0.00 3.85
4086 4472 4.384208 GGATGGCTAAGTTGTACATGAGGT 60.384 45.833 0.00 0.00 0.00 3.85
4087 4473 4.130118 GGATGGCTAAGTTGTACATGAGG 58.870 47.826 0.00 0.00 0.00 3.86
4088 4474 4.130118 GGGATGGCTAAGTTGTACATGAG 58.870 47.826 0.00 0.00 0.00 2.90
4089 4475 3.521531 TGGGATGGCTAAGTTGTACATGA 59.478 43.478 0.00 0.00 0.00 3.07
4090 4476 3.884895 TGGGATGGCTAAGTTGTACATG 58.115 45.455 0.00 0.00 0.00 3.21
4091 4477 4.413520 AGATGGGATGGCTAAGTTGTACAT 59.586 41.667 0.00 0.00 0.00 2.29
4092 4478 3.780294 AGATGGGATGGCTAAGTTGTACA 59.220 43.478 0.00 0.00 0.00 2.90
4093 4479 4.130118 CAGATGGGATGGCTAAGTTGTAC 58.870 47.826 0.00 0.00 0.00 2.90
4094 4480 4.037222 TCAGATGGGATGGCTAAGTTGTA 58.963 43.478 0.00 0.00 0.00 2.41
4095 4481 2.846206 TCAGATGGGATGGCTAAGTTGT 59.154 45.455 0.00 0.00 0.00 3.32
4096 4482 3.565764 TCAGATGGGATGGCTAAGTTG 57.434 47.619 0.00 0.00 0.00 3.16
4097 4483 4.591321 TTTCAGATGGGATGGCTAAGTT 57.409 40.909 0.00 0.00 0.00 2.66
4098 4484 4.591321 TTTTCAGATGGGATGGCTAAGT 57.409 40.909 0.00 0.00 0.00 2.24
4099 4485 7.449395 TCATTATTTTCAGATGGGATGGCTAAG 59.551 37.037 0.00 0.00 0.00 2.18
4242 4635 8.501580 CATGTATTTCAGCGTCTCATTTATCAT 58.498 33.333 0.00 0.00 0.00 2.45
4272 4665 9.471702 AATGCATATAGATGGGATTTAAGAAGG 57.528 33.333 0.00 0.00 33.26 3.46
4328 4721 6.604930 ACATGGTTAAACATAACACGCTTAC 58.395 36.000 5.49 0.00 0.00 2.34
4333 4726 8.388319 CCAATTACATGGTTAAACATAACACG 57.612 34.615 5.49 0.00 35.65 4.49
4350 4743 5.221561 CCCCACATACGATAGACCAATTACA 60.222 44.000 0.00 0.00 41.38 2.41
4528 4924 3.304057 GCAGTAACTTTGGACAGAGTTGC 60.304 47.826 15.89 14.59 38.03 4.17
4775 5171 4.820716 ACTAGTACAGGTACCTCATAAGCG 59.179 45.833 12.84 0.94 36.75 4.68
5010 5406 9.487790 TGCAAAATTTCCTACCAAATAGAAAAG 57.512 29.630 0.00 0.00 31.83 2.27
5065 5461 2.653726 AGTGTGTGTTTGATGGAAGCA 58.346 42.857 0.00 0.00 0.00 3.91
5089 5485 5.549742 AATTGCAAGACAAAGGAATTGGA 57.450 34.783 4.94 0.00 42.86 3.53
5163 5559 5.745227 TGACTAAGGGCTCCTTTAATTCAG 58.255 41.667 11.15 5.14 41.69 3.02
5169 5565 5.586877 TCTTACTGACTAAGGGCTCCTTTA 58.413 41.667 11.15 0.00 41.69 1.85
5208 5604 5.751028 GGCAAATTGACTACTACTAGCTGAG 59.249 44.000 0.00 0.00 0.00 3.35
5209 5605 5.422331 AGGCAAATTGACTACTACTAGCTGA 59.578 40.000 0.00 0.00 30.85 4.26
5269 5665 3.996825 GGTTGCTAATGCTGAACCG 57.003 52.632 0.00 0.00 36.15 4.44
5287 5683 2.163818 TAAACAGTCAGGGCAAGTCG 57.836 50.000 0.00 0.00 0.00 4.18
5525 5922 6.381420 ACTGGTGAAGCAGAGTATAATGTAGT 59.619 38.462 15.97 0.00 0.00 2.73
5594 5991 3.017442 GACCCACCTCTTTTAATGAGCC 58.983 50.000 2.74 0.00 0.00 4.70
5595 5992 2.678336 CGACCCACCTCTTTTAATGAGC 59.322 50.000 2.74 0.00 0.00 4.26
5620 6017 7.156000 TGTCTTTCGACATCCAGTAAACAATA 58.844 34.615 0.00 0.00 44.85 1.90
5645 6042 9.700831 ACCTCCAGCTCAAATAAATAAATTACT 57.299 29.630 0.00 0.00 0.00 2.24
5666 6063 5.104259 ACAAGATCAAGATACCAACCTCC 57.896 43.478 0.00 0.00 0.00 4.30
5772 6169 7.147880 GGAGCTCTTAACTGTTACAATCTAGGA 60.148 40.741 14.64 0.00 0.00 2.94
5834 6231 7.495135 AAAACATGCCCTAGAAACAAAAATG 57.505 32.000 0.00 0.00 0.00 2.32
5836 6233 9.620259 AATAAAAACATGCCCTAGAAACAAAAA 57.380 25.926 0.00 0.00 0.00 1.94
5985 6387 5.572511 TCACGAACAAATATCAAATGCTTGC 59.427 36.000 0.00 0.00 32.14 4.01
6001 6403 3.942115 TCCACAAAATTCAGTCACGAACA 59.058 39.130 0.00 0.00 0.00 3.18
6002 6404 4.545823 TCCACAAAATTCAGTCACGAAC 57.454 40.909 0.00 0.00 0.00 3.95
6003 6405 5.766150 ATTCCACAAAATTCAGTCACGAA 57.234 34.783 0.00 0.00 0.00 3.85
6005 6407 7.922505 TTAAATTCCACAAAATTCAGTCACG 57.077 32.000 0.00 0.00 0.00 4.35
6038 6442 8.796475 ACTTAAATTAGACCACAGACTACGTTA 58.204 33.333 0.00 0.00 0.00 3.18
6041 6445 7.275123 GGAACTTAAATTAGACCACAGACTACG 59.725 40.741 0.00 0.00 0.00 3.51
6042 6446 8.312564 AGGAACTTAAATTAGACCACAGACTAC 58.687 37.037 0.00 0.00 27.25 2.73
6182 6590 2.808906 AGATGGACTGCCCTTTTACC 57.191 50.000 0.00 0.00 35.38 2.85
6190 6598 3.777106 TGGATCAATAGATGGACTGCC 57.223 47.619 0.00 0.00 33.72 4.85
6279 6687 8.749499 GCAAATACTGATGCAACAGATATTTTC 58.251 33.333 28.46 20.87 42.12 2.29
6395 6808 0.254178 AGAATGAGCGGGCAGACAAT 59.746 50.000 0.00 0.00 0.00 2.71
6396 6809 0.036732 AAGAATGAGCGGGCAGACAA 59.963 50.000 0.00 0.00 0.00 3.18
6397 6810 0.391661 GAAGAATGAGCGGGCAGACA 60.392 55.000 0.00 0.00 0.00 3.41
6398 6811 1.092345 GGAAGAATGAGCGGGCAGAC 61.092 60.000 0.00 0.00 0.00 3.51
6399 6812 1.221840 GGAAGAATGAGCGGGCAGA 59.778 57.895 0.00 0.00 0.00 4.26
6402 6815 2.897350 CGGGAAGAATGAGCGGGC 60.897 66.667 0.00 0.00 0.00 6.13
6405 6818 0.727398 GGAAACGGGAAGAATGAGCG 59.273 55.000 0.00 0.00 0.00 5.03
6440 6853 3.325870 TGTGTCAAAGCACGAGATAAGG 58.674 45.455 0.00 0.00 41.94 2.69
6452 6883 7.548196 TTGGAGTTACTAGTTTGTGTCAAAG 57.452 36.000 0.00 0.00 0.00 2.77
6528 6959 1.136500 CTGGTACGAAGGAAGGGTAGC 59.864 57.143 0.00 0.00 35.73 3.58
6968 7407 6.739112 TGGTATCAATCTCATGACGAGTAAG 58.261 40.000 0.00 0.00 42.88 2.34
7014 7453 3.119531 CCTGCTCAACAGTCACAACAAAA 60.120 43.478 0.00 0.00 45.68 2.44
7141 7580 3.191162 TCTTGTGATCTTTGGGCGAAATG 59.809 43.478 0.00 0.00 0.00 2.32
7183 7622 9.968870 GGTTTTGTAAGGTTTTTGTCATGTATA 57.031 29.630 0.00 0.00 0.00 1.47
7258 7721 2.507407 TGGAATGGGTTAAGAGGTGC 57.493 50.000 0.00 0.00 0.00 5.01
7374 7837 4.237724 AGTATATCGTTGCATCCATGTCG 58.762 43.478 0.00 0.00 0.00 4.35
7423 7886 3.114643 TGGATGACAGATACACCAGGA 57.885 47.619 0.00 0.00 0.00 3.86
7455 7918 0.528017 TACAGAAGGCAGAGTCAGCG 59.472 55.000 1.01 0.00 0.00 5.18
7751 8214 4.641396 TGTTTGATTTCATCGAGTCCAGT 58.359 39.130 0.00 0.00 0.00 4.00
7881 8344 0.907486 TGGACAGCTCAATGAGGGAG 59.093 55.000 12.66 0.00 35.47 4.30
7883 8346 3.784511 ATATGGACAGCTCAATGAGGG 57.215 47.619 12.66 0.00 0.00 4.30
8025 8488 4.388469 CCAAATTTACAGAAAACCCATGCG 59.612 41.667 0.00 0.00 0.00 4.73
8054 8517 3.857157 AACCTTGCTCAAACTCAGGTA 57.143 42.857 0.00 0.00 0.00 3.08
8206 8670 7.035004 TGAAACAAGGAGAAAGATGTTGTTTG 58.965 34.615 14.36 0.00 46.24 2.93
8216 8680 5.067023 ACTTCAGCTTGAAACAAGGAGAAAG 59.933 40.000 12.36 1.91 35.73 2.62
8291 8756 4.677683 GTGTATTACACTTCTGATCGCG 57.322 45.455 17.77 0.00 45.27 5.87
8338 8966 3.609373 CGGTTTGCTCGAACGACTTATAA 59.391 43.478 0.00 0.00 0.00 0.98
8371 9000 5.529430 TGTTGACCACAAACTACTTGTATGG 59.471 40.000 0.00 0.00 46.91 2.74
8376 9005 4.739716 GCAATGTTGACCACAAACTACTTG 59.260 41.667 0.00 0.00 39.50 3.16
8484 9147 9.113876 CATAAAAACGTCTGTATCTTTGGTTTC 57.886 33.333 0.00 0.00 0.00 2.78
8549 9212 2.696125 ATGCCCGGATCCCAAGGT 60.696 61.111 0.73 0.00 0.00 3.50
8872 9535 0.464916 AAACCGACGACCTTGCCTTT 60.465 50.000 0.00 0.00 0.00 3.11
8878 9541 0.682852 TCATGGAAACCGACGACCTT 59.317 50.000 0.00 0.00 0.00 3.50
8890 9553 1.522668 CACCAGTTCGCTTCATGGAA 58.477 50.000 0.00 0.00 36.62 3.53
9028 9691 6.558909 CATGCTCCTACAGGAAATTCTTTTC 58.441 40.000 0.00 0.00 44.91 2.29
9048 9711 7.553881 TTCCAGTCTAACTAAAATAGCATGC 57.446 36.000 10.51 10.51 0.00 4.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.