Multiple sequence alignment - TraesCS2A01G550300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G550300 chr2A 100.000 5528 0 0 1 5528 757810625 757805098 0.000000e+00 10209.0
1 TraesCS2A01G550300 chr2A 97.701 87 2 0 2613 2699 757807902 757807816 3.450000e-32 150.0
2 TraesCS2A01G550300 chr2A 97.701 87 2 0 2724 2810 757808013 757807927 3.450000e-32 150.0
3 TraesCS2A01G550300 chr2A 85.567 97 12 2 5256 5351 564261370 564261465 3.520000e-17 100.0
4 TraesCS2A01G550300 chr2D 85.945 1921 96 52 786 2616 627117004 627115168 0.000000e+00 1892.0
5 TraesCS2A01G550300 chr2D 96.133 1086 33 7 2613 3692 627115009 627113927 0.000000e+00 1764.0
6 TraesCS2A01G550300 chr2D 90.120 415 25 8 4647 5051 627112915 627112507 4.910000e-145 525.0
7 TraesCS2A01G550300 chr2D 89.074 421 32 7 60 473 627119076 627118663 1.370000e-140 510.0
8 TraesCS2A01G550300 chr2D 93.413 334 22 0 5195 5528 627112237 627111904 3.850000e-136 496.0
9 TraesCS2A01G550300 chr2D 95.804 286 11 1 3692 3977 627113896 627113612 1.400000e-125 460.0
10 TraesCS2A01G550300 chr2D 93.532 201 7 4 4303 4497 627113357 627113157 1.510000e-75 294.0
11 TraesCS2A01G550300 chr2D 90.789 228 4 3 4075 4286 627113567 627113341 7.010000e-74 289.0
12 TraesCS2A01G550300 chr2D 95.575 113 5 0 2698 2810 627115035 627114923 1.220000e-41 182.0
13 TraesCS2A01G550300 chr2D 96.512 86 3 0 2613 2698 627114898 627114813 5.770000e-30 143.0
14 TraesCS2A01G550300 chr2D 77.193 285 19 22 530 768 627117336 627117052 2.090000e-24 124.0
15 TraesCS2A01G550300 chr2D 89.474 57 5 1 5124 5180 616186095 616186150 2.760000e-08 71.3
16 TraesCS2A01G550300 chr2B 88.266 963 62 21 2613 3567 768549444 768548525 0.000000e+00 1105.0
17 TraesCS2A01G550300 chr2B 87.343 956 68 21 1672 2616 768550749 768549836 0.000000e+00 1046.0
18 TraesCS2A01G550300 chr2B 95.833 264 10 1 3714 3977 768548524 768548262 5.120000e-115 425.0
19 TraesCS2A01G550300 chr2B 85.176 425 27 19 4080 4481 768548140 768547729 2.400000e-108 403.0
20 TraesCS2A01G550300 chr2B 88.119 303 12 10 786 1077 768551871 768551582 6.860000e-89 339.0
21 TraesCS2A01G550300 chr2B 93.000 200 12 1 2613 2810 768549672 768549473 1.950000e-74 291.0
22 TraesCS2A01G550300 chr2B 92.079 202 12 2 2613 2810 768549559 768549358 1.170000e-71 281.0
23 TraesCS2A01G550300 chr2B 85.377 212 22 6 104 311 768558706 768558500 1.560000e-50 211.0
24 TraesCS2A01G550300 chr2B 93.805 113 7 0 2698 2810 768549698 768549586 2.650000e-38 171.0
25 TraesCS2A01G550300 chr2B 96.512 86 3 0 2613 2698 768549333 768549248 5.770000e-30 143.0
26 TraesCS2A01G550300 chr2B 89.189 111 8 3 584 694 768553176 768553070 9.660000e-28 135.0
27 TraesCS2A01G550300 chr2B 92.105 76 6 0 693 768 768551994 768551919 2.110000e-19 108.0
28 TraesCS2A01G550300 chr2B 91.667 60 1 2 426 485 768556307 768556252 4.590000e-11 80.5
29 TraesCS2A01G550300 chr1D 94.444 72 4 0 4960 5031 316784749 316784678 1.630000e-20 111.0
30 TraesCS2A01G550300 chr6D 85.437 103 13 2 5255 5356 48871450 48871349 7.570000e-19 106.0
31 TraesCS2A01G550300 chr6D 85.897 78 10 1 5256 5333 449183457 449183533 1.280000e-11 82.4
32 TraesCS2A01G550300 chr6A 84.404 109 15 2 5249 5356 65795474 65795581 7.570000e-19 106.0
33 TraesCS2A01G550300 chr3B 83.962 106 14 3 5278 5381 78544180 78544284 1.270000e-16 99.0
34 TraesCS2A01G550300 chr3B 87.179 78 9 1 5256 5333 2434769 2434693 2.740000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G550300 chr2A 757805098 757810625 5527 True 3503.000000 10209 98.467333 1 5528 3 chr2A.!!$R1 5527
1 TraesCS2A01G550300 chr2D 627111904 627119076 7172 True 607.181818 1892 91.280909 60 5528 11 chr2D.!!$R1 5468
2 TraesCS2A01G550300 chr2B 768547729 768558706 10977 True 364.500000 1105 90.651615 104 4481 13 chr2B.!!$R1 4377

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
51 52 0.373716 GACGCATTGGGTCACGATTC 59.626 55.0 24.26 0.6 43.51 2.52 F
1127 8704 0.047176 TCCCCTCCTCTCCTCTCTCT 59.953 60.0 0.00 0.0 0.00 3.10 F
1356 9364 0.108329 TCTCATTCCGGTTTCGCCTC 60.108 55.0 0.00 0.0 34.25 4.70 F
2129 10176 0.322816 ATTCTCGGTGGCTGCAATGT 60.323 50.0 0.50 0.0 0.00 2.71 F
3041 11493 0.037303 ACAAGCATGGACAGGACAGG 59.963 55.0 0.00 0.0 0.00 4.00 F
3979 12476 0.950836 TTGTCATTCTGTTGTGCCCG 59.049 50.0 0.00 0.0 0.00 6.13 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1208 9202 0.250234 CCTGCTTCTGTTCCGATGGA 59.750 55.0 0.00 0.0 0.00 3.41 R
2269 10317 0.102120 TTTCCAACCGTGCAAGCAAG 59.898 50.0 0.00 0.0 0.00 4.01 R
2543 10598 0.670546 GCAGATGTGGCGTGTGTACT 60.671 55.0 0.00 0.0 0.00 2.73 R
4019 12548 0.036010 GGTTAGAGAGCAGCAGCCAA 60.036 55.0 0.00 0.0 43.56 4.52 R
4058 12587 0.108585 TCAGGGAGGCACAAACAGAC 59.891 55.0 0.00 0.0 0.00 3.51 R
4897 13578 0.249120 ATTCCACAACGGATCTCGCA 59.751 50.0 3.85 0.0 45.80 5.10 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.774878 GGACGGAAAATAGACACTTGTAC 57.225 43.478 0.00 0.00 0.00 2.90
23 24 4.325472 GGACGGAAAATAGACACTTGTACG 59.675 45.833 0.00 0.00 0.00 3.67
24 25 4.874970 ACGGAAAATAGACACTTGTACGT 58.125 39.130 0.00 0.00 0.00 3.57
25 26 5.291971 ACGGAAAATAGACACTTGTACGTT 58.708 37.500 0.00 0.00 0.00 3.99
26 27 5.754890 ACGGAAAATAGACACTTGTACGTTT 59.245 36.000 0.00 0.00 0.00 3.60
27 28 6.922957 ACGGAAAATAGACACTTGTACGTTTA 59.077 34.615 0.00 0.00 0.00 2.01
28 29 7.115378 ACGGAAAATAGACACTTGTACGTTTAG 59.885 37.037 0.00 0.00 0.00 1.85
29 30 7.326789 CGGAAAATAGACACTTGTACGTTTAGA 59.673 37.037 0.00 0.00 0.00 2.10
30 31 9.148104 GGAAAATAGACACTTGTACGTTTAGAT 57.852 33.333 0.00 0.00 0.00 1.98
31 32 9.953825 GAAAATAGACACTTGTACGTTTAGATG 57.046 33.333 0.00 0.00 0.00 2.90
32 33 8.475331 AAATAGACACTTGTACGTTTAGATGG 57.525 34.615 0.00 0.00 0.00 3.51
33 34 5.717078 AGACACTTGTACGTTTAGATGGA 57.283 39.130 0.00 0.00 0.00 3.41
34 35 5.467705 AGACACTTGTACGTTTAGATGGAC 58.532 41.667 0.00 0.00 0.00 4.02
35 36 4.232221 ACACTTGTACGTTTAGATGGACG 58.768 43.478 0.00 0.00 44.34 4.79
36 37 3.060363 CACTTGTACGTTTAGATGGACGC 59.940 47.826 0.00 0.00 42.67 5.19
37 38 3.247442 CTTGTACGTTTAGATGGACGCA 58.753 45.455 0.00 0.00 42.67 5.24
38 39 3.513680 TGTACGTTTAGATGGACGCAT 57.486 42.857 0.00 0.00 42.67 4.73
39 40 3.852286 TGTACGTTTAGATGGACGCATT 58.148 40.909 0.00 0.00 42.67 3.56
40 41 3.615056 TGTACGTTTAGATGGACGCATTG 59.385 43.478 0.00 0.00 42.67 2.82
41 42 2.006888 ACGTTTAGATGGACGCATTGG 58.993 47.619 0.00 0.00 42.67 3.16
42 43 1.330521 CGTTTAGATGGACGCATTGGG 59.669 52.381 0.00 0.00 32.11 4.12
43 44 2.365582 GTTTAGATGGACGCATTGGGT 58.634 47.619 6.00 6.00 0.00 4.51
44 45 2.325583 TTAGATGGACGCATTGGGTC 57.674 50.000 21.93 21.93 43.35 4.46
45 46 1.199615 TAGATGGACGCATTGGGTCA 58.800 50.000 28.36 17.83 45.38 4.02
46 47 0.392998 AGATGGACGCATTGGGTCAC 60.393 55.000 28.36 19.89 45.38 3.67
47 48 1.705337 GATGGACGCATTGGGTCACG 61.705 60.000 28.36 7.50 45.38 4.35
48 49 2.047655 GGACGCATTGGGTCACGA 60.048 61.111 28.36 0.00 45.38 4.35
49 50 1.449601 GGACGCATTGGGTCACGAT 60.450 57.895 28.36 0.00 45.38 3.73
50 51 1.024579 GGACGCATTGGGTCACGATT 61.025 55.000 28.36 0.00 45.38 3.34
51 52 0.373716 GACGCATTGGGTCACGATTC 59.626 55.000 24.26 0.60 43.51 2.52
52 53 1.024579 ACGCATTGGGTCACGATTCC 61.025 55.000 0.00 0.00 0.00 3.01
53 54 1.721487 GCATTGGGTCACGATTCCG 59.279 57.895 0.00 0.00 42.50 4.30
54 55 1.721487 CATTGGGTCACGATTCCGC 59.279 57.895 0.00 0.00 39.95 5.54
55 56 1.024046 CATTGGGTCACGATTCCGCA 61.024 55.000 0.00 0.00 39.95 5.69
56 57 1.024579 ATTGGGTCACGATTCCGCAC 61.025 55.000 0.00 0.00 39.95 5.34
57 58 3.186047 GGGTCACGATTCCGCACG 61.186 66.667 0.00 0.00 39.95 5.34
58 59 2.431942 GGTCACGATTCCGCACGT 60.432 61.111 0.00 0.00 43.50 4.49
59 60 1.153978 GGTCACGATTCCGCACGTA 60.154 57.895 0.00 0.00 40.76 3.57
60 61 1.408474 GGTCACGATTCCGCACGTAC 61.408 60.000 0.00 0.00 40.76 3.67
61 62 0.730155 GTCACGATTCCGCACGTACA 60.730 55.000 0.00 0.00 40.76 2.90
62 63 0.455464 TCACGATTCCGCACGTACAG 60.455 55.000 0.00 0.00 40.76 2.74
63 64 0.731514 CACGATTCCGCACGTACAGT 60.732 55.000 0.00 0.00 40.76 3.55
64 65 0.455633 ACGATTCCGCACGTACAGTC 60.456 55.000 0.00 0.00 40.92 3.51
65 66 0.455464 CGATTCCGCACGTACAGTCA 60.455 55.000 0.00 0.00 0.00 3.41
79 80 0.597637 CAGTCAGACGCGTTGGAGTT 60.598 55.000 15.53 2.81 0.00 3.01
80 81 0.956633 AGTCAGACGCGTTGGAGTTA 59.043 50.000 15.53 0.00 0.00 2.24
81 82 1.058404 GTCAGACGCGTTGGAGTTAC 58.942 55.000 15.53 0.00 0.00 2.50
83 84 1.060713 CAGACGCGTTGGAGTTACTG 58.939 55.000 15.53 9.74 0.00 2.74
94 95 5.629849 CGTTGGAGTTACTGTAAAGAGAGTG 59.370 44.000 1.10 0.00 30.42 3.51
101 102 1.272490 CTGTAAAGAGAGTGACCCGCA 59.728 52.381 0.00 0.00 0.00 5.69
142 146 1.006805 GGGGCTGTGATCGATCGAG 60.007 63.158 23.84 17.96 0.00 4.04
154 162 1.842686 GATCGAGTCGCGCTTGATG 59.157 57.895 27.10 7.15 45.85 3.07
216 224 2.050442 GCACGCTTCCAAAACCCG 60.050 61.111 0.00 0.00 0.00 5.28
281 289 1.597027 AGTCCCCGAACGCAACTTG 60.597 57.895 0.00 0.00 0.00 3.16
320 2446 3.516615 CCGATGGAGAGTTCTGTTTCTC 58.483 50.000 0.00 0.00 39.25 2.87
365 2491 6.765036 GCATGGTACTCTACTGTACAGTACTA 59.235 42.308 27.99 19.83 43.17 1.82
372 2498 6.126911 ACTCTACTGTACAGTACTACCCTACC 60.127 46.154 27.99 0.00 42.54 3.18
377 2503 2.395619 ACAGTACTACCCTACCATGGC 58.604 52.381 13.04 0.00 0.00 4.40
378 2504 2.292653 ACAGTACTACCCTACCATGGCA 60.293 50.000 13.04 0.00 0.00 4.92
400 2526 3.391665 CTCCCCTCGCCCACATCAC 62.392 68.421 0.00 0.00 0.00 3.06
411 2537 0.673644 CCACATCACCGGACTCCAAC 60.674 60.000 9.46 0.00 0.00 3.77
436 2562 2.618302 GGATGGATCATGGCTGGATCTG 60.618 54.545 15.23 0.00 40.74 2.90
438 2564 0.608582 GGATCATGGCTGGATCTGGC 60.609 60.000 15.23 0.00 40.74 4.85
439 2565 0.954449 GATCATGGCTGGATCTGGCG 60.954 60.000 10.43 0.00 38.47 5.69
440 2566 3.285215 CATGGCTGGATCTGGCGC 61.285 66.667 0.00 0.00 0.00 6.53
441 2567 4.923942 ATGGCTGGATCTGGCGCG 62.924 66.667 0.00 0.00 0.00 6.86
504 3893 0.978151 TACGTACAGGTTGGCATGGT 59.022 50.000 0.00 0.00 0.00 3.55
505 3894 0.978151 ACGTACAGGTTGGCATGGTA 59.022 50.000 0.00 0.00 0.00 3.25
506 3895 1.557832 ACGTACAGGTTGGCATGGTAT 59.442 47.619 0.00 0.00 0.00 2.73
507 3896 2.767394 ACGTACAGGTTGGCATGGTATA 59.233 45.455 0.00 0.00 0.00 1.47
508 3897 3.389983 ACGTACAGGTTGGCATGGTATAT 59.610 43.478 0.00 0.00 0.00 0.86
509 3898 4.141574 ACGTACAGGTTGGCATGGTATATT 60.142 41.667 0.00 0.00 0.00 1.28
510 3899 4.213270 CGTACAGGTTGGCATGGTATATTG 59.787 45.833 0.00 0.00 0.00 1.90
511 3900 3.565307 ACAGGTTGGCATGGTATATTGG 58.435 45.455 0.00 0.00 0.00 3.16
537 3941 1.153229 GGTGATACAGCCGAACCCC 60.153 63.158 0.00 0.00 0.00 4.95
565 3969 1.270826 CGCATCATCCTACGACCAGAT 59.729 52.381 0.00 0.00 0.00 2.90
566 3970 2.681706 GCATCATCCTACGACCAGATG 58.318 52.381 0.00 0.00 39.00 2.90
569 3973 1.957177 TCATCCTACGACCAGATGCTC 59.043 52.381 0.00 0.00 37.82 4.26
571 3975 1.299468 CCTACGACCAGATGCTCGC 60.299 63.158 0.00 0.00 32.98 5.03
638 7025 3.056328 GCCAACCAACGAGGCTCC 61.056 66.667 9.32 0.00 44.92 4.70
677 7094 3.648982 CTTGCACGCTCGCCAACA 61.649 61.111 0.00 0.00 0.00 3.33
922 8467 2.815211 CCCACATGGCAGACGACG 60.815 66.667 0.00 0.00 0.00 5.12
1046 8622 1.463674 GTGAACCACCACCATCATCC 58.536 55.000 0.00 0.00 0.00 3.51
1093 8670 0.468226 GTCAGTTCAGTCCACCACCA 59.532 55.000 0.00 0.00 0.00 4.17
1095 8672 0.535102 CAGTTCAGTCCACCACCACC 60.535 60.000 0.00 0.00 0.00 4.61
1096 8673 0.986019 AGTTCAGTCCACCACCACCA 60.986 55.000 0.00 0.00 0.00 4.17
1098 8675 1.990160 TTCAGTCCACCACCACCACC 61.990 60.000 0.00 0.00 0.00 4.61
1099 8676 3.175710 AGTCCACCACCACCACCC 61.176 66.667 0.00 0.00 0.00 4.61
1100 8677 4.280019 GTCCACCACCACCACCCC 62.280 72.222 0.00 0.00 0.00 4.95
1101 8678 4.845307 TCCACCACCACCACCCCA 62.845 66.667 0.00 0.00 0.00 4.96
1102 8679 4.596585 CCACCACCACCACCCCAC 62.597 72.222 0.00 0.00 0.00 4.61
1103 8680 4.596585 CACCACCACCACCCCACC 62.597 72.222 0.00 0.00 0.00 4.61
1127 8704 0.047176 TCCCCTCCTCTCCTCTCTCT 59.953 60.000 0.00 0.00 0.00 3.10
1179 8762 0.612744 ACTCCTGCAGCTTCTTCTCC 59.387 55.000 8.66 0.00 0.00 3.71
1196 9190 2.681778 CTCCCCCAGACTGCGTCT 60.682 66.667 5.54 5.54 44.44 4.18
1208 9202 4.194720 GCGTCTGCGTCCTCCGAT 62.195 66.667 0.00 0.00 40.81 4.18
1209 9203 2.024871 CGTCTGCGTCCTCCGATC 59.975 66.667 0.00 0.00 39.56 3.69
1210 9204 2.413765 GTCTGCGTCCTCCGATCC 59.586 66.667 0.00 0.00 39.56 3.36
1211 9205 2.044352 TCTGCGTCCTCCGATCCA 60.044 61.111 0.00 0.00 39.56 3.41
1212 9206 1.455773 TCTGCGTCCTCCGATCCAT 60.456 57.895 0.00 0.00 39.56 3.41
1213 9207 1.006805 CTGCGTCCTCCGATCCATC 60.007 63.158 0.00 0.00 39.56 3.51
1224 9218 1.212616 CGATCCATCGGAACAGAAGC 58.787 55.000 0.73 0.00 45.93 3.86
1225 9219 1.471501 CGATCCATCGGAACAGAAGCA 60.472 52.381 0.73 0.00 45.93 3.91
1226 9220 2.208431 GATCCATCGGAACAGAAGCAG 58.792 52.381 0.00 0.00 34.34 4.24
1227 9221 0.250234 TCCATCGGAACAGAAGCAGG 59.750 55.000 0.00 0.00 0.00 4.85
1228 9222 0.745845 CCATCGGAACAGAAGCAGGG 60.746 60.000 0.00 0.00 0.00 4.45
1229 9223 1.078143 ATCGGAACAGAAGCAGGGC 60.078 57.895 0.00 0.00 0.00 5.19
1303 9303 3.403038 CAACTAGAACCAGAACCAGGTG 58.597 50.000 0.00 0.00 39.86 4.00
1315 9315 1.739562 CCAGGTGCGTGCTCTCTTC 60.740 63.158 0.00 0.00 0.00 2.87
1327 9327 2.114616 GCTCTCTTCATCTTCTCCCCA 58.885 52.381 0.00 0.00 0.00 4.96
1356 9364 0.108329 TCTCATTCCGGTTTCGCCTC 60.108 55.000 0.00 0.00 34.25 4.70
1360 9368 0.906775 ATTCCGGTTTCGCCTCCTAA 59.093 50.000 0.00 0.00 34.25 2.69
1361 9369 0.686224 TTCCGGTTTCGCCTCCTAAA 59.314 50.000 0.00 0.00 34.25 1.85
1374 9384 0.708802 TCCTAAACTCTCCCCGGACT 59.291 55.000 0.73 0.00 0.00 3.85
1414 9428 2.979813 CCTGCGTTTTCTTTCGGATTTG 59.020 45.455 0.00 0.00 0.00 2.32
1478 9501 5.510690 GGTTAAACCAAGGGACATTTTGGAG 60.511 44.000 10.00 0.00 45.32 3.86
1479 9502 2.309136 ACCAAGGGACATTTTGGAGG 57.691 50.000 10.00 0.00 45.32 4.30
1482 9505 2.225117 CCAAGGGACATTTTGGAGGAGT 60.225 50.000 0.00 0.00 45.32 3.85
1483 9506 3.010138 CCAAGGGACATTTTGGAGGAGTA 59.990 47.826 0.00 0.00 45.32 2.59
1496 9521 3.595138 TGGAGGAGTAGTAGTAGGTGGTT 59.405 47.826 0.00 0.00 0.00 3.67
1497 9522 3.952967 GGAGGAGTAGTAGTAGGTGGTTG 59.047 52.174 0.00 0.00 0.00 3.77
1510 9535 6.708285 AGTAGGTGGTTGGTGTTCTTATTAG 58.292 40.000 0.00 0.00 0.00 1.73
1511 9536 5.578157 AGGTGGTTGGTGTTCTTATTAGT 57.422 39.130 0.00 0.00 0.00 2.24
1531 9564 2.109126 GCCGTTGATCAGAGCCCAC 61.109 63.158 0.00 0.00 0.00 4.61
1561 9594 2.289565 GGAGGCTGCATTGTTAGGTAC 58.710 52.381 0.00 0.00 0.00 3.34
1609 9648 2.094338 TCTGTACACGCTCTCGAGTCTA 60.094 50.000 13.13 0.00 39.96 2.59
1641 9680 3.447229 GTGGGATTCTGTGGGGTTATTTG 59.553 47.826 0.00 0.00 0.00 2.32
1644 9683 4.159693 GGGATTCTGTGGGGTTATTTGTTC 59.840 45.833 0.00 0.00 0.00 3.18
1652 9691 1.129811 GGGTTATTTGTTCTGTCCGCG 59.870 52.381 0.00 0.00 0.00 6.46
1657 9696 1.942677 TTTGTTCTGTCCGCGAGAAA 58.057 45.000 8.23 0.00 31.27 2.52
1659 9698 2.163818 TGTTCTGTCCGCGAGAAAAT 57.836 45.000 8.23 0.00 31.27 1.82
1667 9707 3.118920 TGTCCGCGAGAAAATAAGGATCA 60.119 43.478 8.23 0.00 0.00 2.92
1714 9754 4.022589 CAGTGAACTGGATTTGCATCAGTT 60.023 41.667 18.55 18.55 40.20 3.16
1729 9773 4.857588 GCATCAGTTTTCTTGCTGATTCAG 59.142 41.667 9.40 9.40 46.66 3.02
1733 9777 7.566760 TCAGTTTTCTTGCTGATTCAGTTTA 57.433 32.000 14.90 0.11 36.89 2.01
1735 9779 8.632679 TCAGTTTTCTTGCTGATTCAGTTTATT 58.367 29.630 14.90 0.00 36.89 1.40
1737 9781 9.468532 AGTTTTCTTGCTGATTCAGTTTATTTC 57.531 29.630 14.90 0.00 33.43 2.17
1739 9783 9.683069 TTTTCTTGCTGATTCAGTTTATTTCTC 57.317 29.630 14.90 0.00 33.43 2.87
1740 9784 7.984422 TCTTGCTGATTCAGTTTATTTCTCA 57.016 32.000 14.90 0.00 33.43 3.27
1742 9786 9.017509 TCTTGCTGATTCAGTTTATTTCTCATT 57.982 29.630 14.90 0.00 33.43 2.57
1745 9789 9.453572 TGCTGATTCAGTTTATTTCTCATTAGT 57.546 29.630 14.90 0.00 33.43 2.24
1798 9842 1.867363 TCTCTAGTTTCAGGCCCTCC 58.133 55.000 0.00 0.00 0.00 4.30
1819 9863 6.665248 CCTCCTTTTCTTTTCACCTGGATAAT 59.335 38.462 0.00 0.00 0.00 1.28
1850 9894 2.434428 CTTCTGGCTCTTGCTGATTGT 58.566 47.619 0.00 0.00 39.59 2.71
1852 9896 2.156917 TCTGGCTCTTGCTGATTGTTG 58.843 47.619 0.00 0.00 39.59 3.33
1860 9904 2.823924 TGCTGATTGTTGCAAATGCT 57.176 40.000 0.00 0.00 42.66 3.79
1878 9922 5.909621 ATGCTGCATACATTTCAAGTTCT 57.090 34.783 14.52 0.00 0.00 3.01
1887 9931 0.825840 TTTCAAGTTCTTGGCCGGGG 60.826 55.000 2.18 0.00 0.00 5.73
1909 9953 5.299949 GGAAAATGGCATTGAACTTCTGTT 58.700 37.500 14.47 0.31 39.42 3.16
1931 9976 3.577848 TGCACATACCTGCAGGAAAATTT 59.422 39.130 39.19 18.08 42.36 1.82
1977 10022 0.683504 GTAGACCCGGCTGGAGAGAA 60.684 60.000 15.09 0.00 37.49 2.87
1985 10030 0.907230 GGCTGGAGAGAACTCAGGGT 60.907 60.000 4.64 0.00 44.22 4.34
2129 10176 0.322816 ATTCTCGGTGGCTGCAATGT 60.323 50.000 0.50 0.00 0.00 2.71
2143 10191 1.670967 GCAATGTGCCAAGAAAGCTCC 60.671 52.381 0.00 0.00 37.42 4.70
2239 10287 4.756642 CACTTGTCCTGTCTGCTTGAAATA 59.243 41.667 0.00 0.00 0.00 1.40
2266 10314 2.041620 TGTAAAGGGGATCTTGCTTGCT 59.958 45.455 0.00 0.00 35.55 3.91
2267 10315 2.315720 AAAGGGGATCTTGCTTGCTT 57.684 45.000 0.00 0.00 35.55 3.91
2268 10316 1.553706 AAGGGGATCTTGCTTGCTTG 58.446 50.000 0.00 0.00 33.76 4.01
2269 10317 0.969409 AGGGGATCTTGCTTGCTTGC 60.969 55.000 0.00 0.00 0.00 4.01
2402 10451 0.392336 GTGGTTCTTGCCCATTTGCA 59.608 50.000 0.00 0.00 40.07 4.08
2405 10454 1.337167 GGTTCTTGCCCATTTGCACTC 60.337 52.381 0.00 0.00 41.88 3.51
2447 10496 7.283127 TCAGGTTTCACTCATTTATTATCTGCC 59.717 37.037 0.00 0.00 0.00 4.85
2460 10509 8.593945 TTTATTATCTGCCTCCTTTTTCATGT 57.406 30.769 0.00 0.00 0.00 3.21
2461 10510 6.705863 ATTATCTGCCTCCTTTTTCATGTC 57.294 37.500 0.00 0.00 0.00 3.06
2463 10512 3.679389 TCTGCCTCCTTTTTCATGTCTC 58.321 45.455 0.00 0.00 0.00 3.36
2502 10556 2.800250 AGCTTGATCTTTTCTGGGGTG 58.200 47.619 0.00 0.00 0.00 4.61
2528 10583 3.598019 TTTAGGACGGCGATTTACTGT 57.402 42.857 16.62 0.00 0.00 3.55
2543 10598 5.794726 TTTACTGTAGGTTAGCACTGTCA 57.205 39.130 0.00 0.00 0.00 3.58
2544 10599 3.944055 ACTGTAGGTTAGCACTGTCAG 57.056 47.619 0.00 0.00 0.00 3.51
2552 10607 2.699251 TAGCACTGTCAGTACACACG 57.301 50.000 4.85 0.00 0.00 4.49
2588 10643 7.399245 TGCTATTTTTGTAGGGGTATTGTTC 57.601 36.000 0.00 0.00 0.00 3.18
2594 10649 8.999905 TTTTTGTAGGGGTATTGTTCTTACTT 57.000 30.769 0.00 0.00 0.00 2.24
2601 10656 6.958192 AGGGGTATTGTTCTTACTTAGAGTCA 59.042 38.462 0.00 0.00 33.51 3.41
2605 10660 7.703197 GGTATTGTTCTTACTTAGAGTCAGCTC 59.297 40.741 0.00 0.00 41.94 4.09
2836 11288 8.831715 ATGGTTTCTTTTCATGGAAATTGTAC 57.168 30.769 0.00 0.00 34.60 2.90
2895 11347 6.652481 CCTCCATTTAGTGCAGTATTAGATGG 59.348 42.308 18.47 18.47 35.67 3.51
2954 11406 9.367444 GTACTTTTAGTATGCTTCAAGCTCTTA 57.633 33.333 11.57 0.00 42.97 2.10
2983 11435 8.637986 GGCCAATAAAATGAGATTTGGTACATA 58.362 33.333 0.00 0.00 39.30 2.29
3041 11493 0.037303 ACAAGCATGGACAGGACAGG 59.963 55.000 0.00 0.00 0.00 4.00
3064 11516 7.720957 CAGGAAATGTGGTATTGGATATTGAGA 59.279 37.037 0.00 0.00 0.00 3.27
3081 11533 1.973812 GAGCCTGCCTCAACAACCC 60.974 63.158 0.00 0.00 40.45 4.11
3208 11664 2.183811 CTGCAGAGAGCCCTGTCG 59.816 66.667 8.42 0.00 44.83 4.35
3417 11875 7.092716 GTGACACATAATTGCAAGATCCTTTT 58.907 34.615 4.94 0.00 0.00 2.27
3654 12118 5.220970 GCAAACAAACCTGTCTACTGCTTTA 60.221 40.000 0.00 0.00 33.45 1.85
3700 12166 1.970917 GATTCGGAACACTGCTGCCG 61.971 60.000 0.00 0.00 44.83 5.69
3743 12240 9.030452 ACCACTGGTGCTTATATTTATTTGAAA 57.970 29.630 0.00 0.00 32.98 2.69
3763 12260 6.397272 TGAAATTTTCTTCACTGCAGTTGTT 58.603 32.000 18.94 0.71 30.31 2.83
3973 12470 5.745294 CCTTGTTGAGTTTGTCATTCTGTTG 59.255 40.000 0.00 0.00 34.17 3.33
3977 12474 3.066621 TGAGTTTGTCATTCTGTTGTGCC 59.933 43.478 0.00 0.00 0.00 5.01
3978 12475 2.362077 AGTTTGTCATTCTGTTGTGCCC 59.638 45.455 0.00 0.00 0.00 5.36
3979 12476 0.950836 TTGTCATTCTGTTGTGCCCG 59.049 50.000 0.00 0.00 0.00 6.13
3980 12477 1.210155 GTCATTCTGTTGTGCCCGC 59.790 57.895 0.00 0.00 0.00 6.13
3981 12478 1.971167 TCATTCTGTTGTGCCCGCC 60.971 57.895 0.00 0.00 0.00 6.13
3982 12479 1.973281 CATTCTGTTGTGCCCGCCT 60.973 57.895 0.00 0.00 0.00 5.52
3985 12482 1.452145 TTCTGTTGTGCCCGCCTTTC 61.452 55.000 0.00 0.00 0.00 2.62
3988 12485 2.282180 TTGTGCCCGCCTTTCTCC 60.282 61.111 0.00 0.00 0.00 3.71
3989 12486 2.829384 TTGTGCCCGCCTTTCTCCT 61.829 57.895 0.00 0.00 0.00 3.69
3992 12489 3.403558 GCCCGCCTTTCTCCTCCT 61.404 66.667 0.00 0.00 0.00 3.69
3993 12490 2.904131 CCCGCCTTTCTCCTCCTC 59.096 66.667 0.00 0.00 0.00 3.71
3994 12491 1.687493 CCCGCCTTTCTCCTCCTCT 60.687 63.158 0.00 0.00 0.00 3.69
3995 12492 1.268283 CCCGCCTTTCTCCTCCTCTT 61.268 60.000 0.00 0.00 0.00 2.85
3997 12494 1.831736 CCGCCTTTCTCCTCCTCTTTA 59.168 52.381 0.00 0.00 0.00 1.85
3998 12495 2.236395 CCGCCTTTCTCCTCCTCTTTAA 59.764 50.000 0.00 0.00 0.00 1.52
3999 12496 3.263261 CGCCTTTCTCCTCCTCTTTAAC 58.737 50.000 0.00 0.00 0.00 2.01
4000 12497 3.055747 CGCCTTTCTCCTCCTCTTTAACT 60.056 47.826 0.00 0.00 0.00 2.24
4001 12498 4.509616 GCCTTTCTCCTCCTCTTTAACTC 58.490 47.826 0.00 0.00 0.00 3.01
4002 12499 4.749976 CCTTTCTCCTCCTCTTTAACTCG 58.250 47.826 0.00 0.00 0.00 4.18
4004 12501 5.279556 CCTTTCTCCTCCTCTTTAACTCGTT 60.280 44.000 0.00 0.00 0.00 3.85
4005 12502 5.803237 TTCTCCTCCTCTTTAACTCGTTT 57.197 39.130 0.00 0.00 0.00 3.60
4006 12503 6.906157 TTCTCCTCCTCTTTAACTCGTTTA 57.094 37.500 0.00 0.00 0.00 2.01
4012 12541 8.248945 TCCTCCTCTTTAACTCGTTTATTACAG 58.751 37.037 0.00 0.00 0.00 2.74
4017 12546 8.524870 TCTTTAACTCGTTTATTACAGTCACC 57.475 34.615 0.00 0.00 0.00 4.02
4019 12548 4.510038 ACTCGTTTATTACAGTCACCGT 57.490 40.909 0.00 0.00 0.00 4.83
4037 12566 1.082690 GTTGGCTGCTGCTCTCTAAC 58.917 55.000 15.64 9.26 39.59 2.34
4040 12569 1.520342 GCTGCTGCTCTCTAACCCG 60.520 63.158 8.53 0.00 36.03 5.28
4050 12579 3.676598 GCTCTCTAACCCGTTTCCTTCTC 60.677 52.174 0.00 0.00 0.00 2.87
4051 12580 3.503365 TCTCTAACCCGTTTCCTTCTCA 58.497 45.455 0.00 0.00 0.00 3.27
4052 12581 4.094476 TCTCTAACCCGTTTCCTTCTCAT 58.906 43.478 0.00 0.00 0.00 2.90
4053 12582 4.081642 TCTCTAACCCGTTTCCTTCTCATG 60.082 45.833 0.00 0.00 0.00 3.07
4054 12583 1.534729 AACCCGTTTCCTTCTCATGC 58.465 50.000 0.00 0.00 0.00 4.06
4056 12585 1.202879 ACCCGTTTCCTTCTCATGCAA 60.203 47.619 0.00 0.00 0.00 4.08
4057 12586 2.094675 CCCGTTTCCTTCTCATGCAAT 58.905 47.619 0.00 0.00 0.00 3.56
4059 12588 2.489329 CCGTTTCCTTCTCATGCAATGT 59.511 45.455 0.00 0.00 46.80 2.71
4060 12589 3.426695 CCGTTTCCTTCTCATGCAATGTC 60.427 47.826 0.00 0.00 46.80 3.06
4062 12591 4.670992 CGTTTCCTTCTCATGCAATGTCTG 60.671 45.833 0.00 0.00 46.80 3.51
4063 12592 3.708403 TCCTTCTCATGCAATGTCTGT 57.292 42.857 0.00 0.00 46.80 3.41
4066 12595 4.216902 TCCTTCTCATGCAATGTCTGTTTG 59.783 41.667 0.00 0.00 46.80 2.93
4067 12596 4.022589 CCTTCTCATGCAATGTCTGTTTGT 60.023 41.667 0.00 0.00 46.80 2.83
4068 12597 4.492791 TCTCATGCAATGTCTGTTTGTG 57.507 40.909 0.00 0.00 46.80 3.33
4069 12598 2.984471 CTCATGCAATGTCTGTTTGTGC 59.016 45.455 0.00 0.00 46.80 4.57
4070 12599 2.063266 CATGCAATGTCTGTTTGTGCC 58.937 47.619 0.00 0.00 40.20 5.01
4071 12600 1.401761 TGCAATGTCTGTTTGTGCCT 58.598 45.000 0.00 0.00 34.25 4.75
4072 12601 1.337703 TGCAATGTCTGTTTGTGCCTC 59.662 47.619 0.00 0.00 34.25 4.70
4073 12602 1.336240 GCAATGTCTGTTTGTGCCTCC 60.336 52.381 0.00 0.00 0.00 4.30
4151 12680 2.619074 GGCAAGGTGGAAGCATAGTCTT 60.619 50.000 0.00 0.00 36.26 3.01
4227 12769 9.449550 CTTTCTTTTCAGTTTTTGCTTTGTTTT 57.550 25.926 0.00 0.00 0.00 2.43
4240 12782 3.306294 GCTTTGTTTTGGGGAGATGAAGG 60.306 47.826 0.00 0.00 0.00 3.46
4294 12839 1.270625 GGAGACGGACACCAACATTCA 60.271 52.381 0.00 0.00 0.00 2.57
4295 12840 2.489971 GAGACGGACACCAACATTCAA 58.510 47.619 0.00 0.00 0.00 2.69
4328 12873 1.134848 GGAGATGACACAGTCAGGCTC 60.135 57.143 17.42 17.42 46.04 4.70
4329 12874 1.824230 GAGATGACACAGTCAGGCTCT 59.176 52.381 17.97 11.38 46.04 4.09
4331 12876 0.529833 ATGACACAGTCAGGCTCTCG 59.470 55.000 6.01 0.00 46.04 4.04
4332 12877 0.823769 TGACACAGTCAGGCTCTCGT 60.824 55.000 0.00 0.00 37.67 4.18
4394 12944 4.432741 GGTGCTCCTTGGCCTCCC 62.433 72.222 3.32 0.00 0.00 4.30
4517 13183 2.823593 TCGACGCGGGTTCGGATA 60.824 61.111 12.47 0.00 36.79 2.59
4531 13197 2.912020 GGATACGAACCCCACTCCT 58.088 57.895 0.00 0.00 0.00 3.69
4532 13198 1.201424 GGATACGAACCCCACTCCTT 58.799 55.000 0.00 0.00 0.00 3.36
4533 13199 1.558294 GGATACGAACCCCACTCCTTT 59.442 52.381 0.00 0.00 0.00 3.11
4534 13200 2.629051 GATACGAACCCCACTCCTTTG 58.371 52.381 0.00 0.00 0.00 2.77
4535 13201 0.688487 TACGAACCCCACTCCTTTGG 59.312 55.000 0.00 0.00 36.26 3.28
4537 13203 1.460699 GAACCCCACTCCTTTGGCT 59.539 57.895 0.00 0.00 35.00 4.75
4538 13204 0.895559 GAACCCCACTCCTTTGGCTG 60.896 60.000 0.00 0.00 35.00 4.85
4539 13205 2.677875 CCCCACTCCTTTGGCTGC 60.678 66.667 0.00 0.00 35.00 5.25
4540 13206 2.437897 CCCACTCCTTTGGCTGCT 59.562 61.111 0.00 0.00 35.00 4.24
4541 13207 1.975407 CCCACTCCTTTGGCTGCTG 60.975 63.158 0.00 0.00 35.00 4.41
4542 13208 1.975407 CCACTCCTTTGGCTGCTGG 60.975 63.158 0.00 0.00 0.00 4.85
4543 13209 1.073722 CACTCCTTTGGCTGCTGGA 59.926 57.895 0.00 2.13 0.00 3.86
4544 13210 0.538057 CACTCCTTTGGCTGCTGGAA 60.538 55.000 0.00 0.00 0.00 3.53
4545 13211 0.251077 ACTCCTTTGGCTGCTGGAAG 60.251 55.000 0.00 1.71 0.00 3.46
4558 13224 0.179113 CTGGAAGCGAGAGAAGGAGC 60.179 60.000 0.00 0.00 0.00 4.70
4560 13226 1.226831 GAAGCGAGAGAAGGAGCCG 60.227 63.158 0.00 0.00 0.00 5.52
4561 13227 1.939769 GAAGCGAGAGAAGGAGCCGT 61.940 60.000 0.00 0.00 0.00 5.68
4562 13228 2.202676 GCGAGAGAAGGAGCCGTG 60.203 66.667 0.00 0.00 0.00 4.94
4564 13230 1.137825 CGAGAGAAGGAGCCGTGTC 59.862 63.158 0.00 0.00 0.00 3.67
4565 13231 1.587043 CGAGAGAAGGAGCCGTGTCA 61.587 60.000 2.79 0.00 0.00 3.58
4566 13232 0.172352 GAGAGAAGGAGCCGTGTCAG 59.828 60.000 2.79 0.00 0.00 3.51
4568 13234 0.109039 GAGAAGGAGCCGTGTCAGTC 60.109 60.000 0.00 0.00 0.00 3.51
4570 13236 2.820767 GAAGGAGCCGTGTCAGTCCG 62.821 65.000 0.00 0.00 33.99 4.79
4571 13237 3.371063 GGAGCCGTGTCAGTCCGA 61.371 66.667 0.00 0.00 0.00 4.55
4572 13238 2.711922 GGAGCCGTGTCAGTCCGAT 61.712 63.158 0.00 0.00 0.00 4.18
4573 13239 1.215647 GAGCCGTGTCAGTCCGATT 59.784 57.895 0.00 0.00 0.00 3.34
4574 13240 0.802607 GAGCCGTGTCAGTCCGATTC 60.803 60.000 0.00 0.00 0.00 2.52
4575 13241 1.080093 GCCGTGTCAGTCCGATTCA 60.080 57.895 0.00 0.00 0.00 2.57
4576 13242 0.460284 GCCGTGTCAGTCCGATTCAT 60.460 55.000 0.00 0.00 0.00 2.57
4577 13243 2.007049 GCCGTGTCAGTCCGATTCATT 61.007 52.381 0.00 0.00 0.00 2.57
4578 13244 2.737359 GCCGTGTCAGTCCGATTCATTA 60.737 50.000 0.00 0.00 0.00 1.90
4579 13245 3.717707 CCGTGTCAGTCCGATTCATTAT 58.282 45.455 0.00 0.00 0.00 1.28
4580 13246 4.119862 CCGTGTCAGTCCGATTCATTATT 58.880 43.478 0.00 0.00 0.00 1.40
4581 13247 5.286438 CCGTGTCAGTCCGATTCATTATTA 58.714 41.667 0.00 0.00 0.00 0.98
4582 13248 5.175126 CCGTGTCAGTCCGATTCATTATTAC 59.825 44.000 0.00 0.00 0.00 1.89
4584 13250 4.743151 TGTCAGTCCGATTCATTATTACGC 59.257 41.667 0.00 0.00 0.00 4.42
4585 13251 4.150098 GTCAGTCCGATTCATTATTACGCC 59.850 45.833 0.00 0.00 0.00 5.68
4586 13252 3.432252 CAGTCCGATTCATTATTACGCCC 59.568 47.826 0.00 0.00 0.00 6.13
4587 13253 2.740447 GTCCGATTCATTATTACGCCCC 59.260 50.000 0.00 0.00 0.00 5.80
4591 13257 2.351706 TTCATTATTACGCCCCCACC 57.648 50.000 0.00 0.00 0.00 4.61
4592 13258 1.214217 TCATTATTACGCCCCCACCA 58.786 50.000 0.00 0.00 0.00 4.17
4594 13260 0.184211 ATTATTACGCCCCCACCACC 59.816 55.000 0.00 0.00 0.00 4.61
4595 13261 0.915387 TTATTACGCCCCCACCACCT 60.915 55.000 0.00 0.00 0.00 4.00
4596 13262 1.339644 TATTACGCCCCCACCACCTC 61.340 60.000 0.00 0.00 0.00 3.85
4631 13297 4.038080 CTTTGGCGTCCCCGTTGC 62.038 66.667 0.00 0.00 35.87 4.17
4878 13559 3.511934 GTCTGCTAGTTCTTCTTCCCAGA 59.488 47.826 0.00 0.00 0.00 3.86
4879 13560 3.511934 TCTGCTAGTTCTTCTTCCCAGAC 59.488 47.826 0.00 0.00 0.00 3.51
4880 13561 3.511477 TGCTAGTTCTTCTTCCCAGACT 58.489 45.455 0.00 0.00 0.00 3.24
4881 13562 3.511934 TGCTAGTTCTTCTTCCCAGACTC 59.488 47.826 0.00 0.00 0.00 3.36
4883 13564 4.381505 GCTAGTTCTTCTTCCCAGACTCAG 60.382 50.000 0.00 0.00 0.00 3.35
4885 13566 4.227197 AGTTCTTCTTCCCAGACTCAGAA 58.773 43.478 0.00 0.00 0.00 3.02
4886 13567 4.656112 AGTTCTTCTTCCCAGACTCAGAAA 59.344 41.667 0.00 0.00 29.13 2.52
4888 13569 5.413309 TCTTCTTCCCAGACTCAGAAATC 57.587 43.478 0.00 0.00 0.00 2.17
4889 13570 5.090139 TCTTCTTCCCAGACTCAGAAATCT 58.910 41.667 0.00 0.00 0.00 2.40
4890 13571 4.815533 TCTTCCCAGACTCAGAAATCTG 57.184 45.455 3.99 3.99 45.08 2.90
4892 13573 1.556911 TCCCAGACTCAGAAATCTGCC 59.443 52.381 5.53 0.00 43.46 4.85
4893 13574 1.407989 CCCAGACTCAGAAATCTGCCC 60.408 57.143 5.53 0.00 43.46 5.36
4895 13576 0.539051 AGACTCAGAAATCTGCCCCG 59.461 55.000 5.53 0.00 43.46 5.73
4896 13577 1.078143 ACTCAGAAATCTGCCCCGC 60.078 57.895 5.53 0.00 43.46 6.13
4897 13578 1.222936 CTCAGAAATCTGCCCCGCT 59.777 57.895 5.53 0.00 43.46 5.52
4900 13581 3.880846 GAAATCTGCCCCGCTGCG 61.881 66.667 16.34 16.34 0.00 5.18
4980 13661 2.912025 AAAAGCACCTGCCCGTGG 60.912 61.111 2.79 0.00 43.38 4.94
5012 13693 1.849097 CCAACGATTCTACGCTACCC 58.151 55.000 0.00 0.00 36.70 3.69
5027 13708 2.878526 GCTACCCCAAACTGACGGATTT 60.879 50.000 0.00 0.00 0.00 2.17
5068 13890 9.406828 GCCTCTTTTAAATAGTTTTACAACCAG 57.593 33.333 0.00 0.00 32.70 4.00
5167 13989 6.086222 ACATCGAAAAGAAAATGAACGGATG 58.914 36.000 0.00 0.00 0.00 3.51
5175 13997 5.431765 AGAAAATGAACGGATGCATCTACT 58.568 37.500 25.28 10.29 0.00 2.57
5178 14011 1.831106 TGAACGGATGCATCTACTGGT 59.169 47.619 25.28 12.14 0.00 4.00
5202 14048 0.041312 ACATGTGCTCGTTTTGACGC 60.041 50.000 0.00 0.00 0.00 5.19
5206 14052 2.497628 GCTCGTTTTGACGCTGCG 60.498 61.111 21.91 21.91 0.00 5.18
5212 14058 1.524986 CGTTTTGACGCTGCGTATGAG 60.525 52.381 29.03 13.31 41.37 2.90
5225 14071 4.226761 TGCGTATGAGTATGCTAATCACG 58.773 43.478 1.88 6.08 42.21 4.35
5237 14083 8.232513 AGTATGCTAATCACGCATTTTATGATG 58.767 33.333 2.64 0.00 45.18 3.07
5239 14085 7.205737 TGCTAATCACGCATTTTATGATGAT 57.794 32.000 0.00 0.00 38.50 2.45
5254 14100 4.406648 TGATGATATTGGTGAACTCGCT 57.593 40.909 0.00 0.00 0.00 4.93
5261 14107 0.541063 TGGTGAACTCGCTCCCACTA 60.541 55.000 0.00 0.00 0.00 2.74
5268 14114 1.332195 CTCGCTCCCACTATCCATGA 58.668 55.000 0.00 0.00 0.00 3.07
5271 14117 3.703556 CTCGCTCCCACTATCCATGATAT 59.296 47.826 0.00 0.00 0.00 1.63
5276 14122 5.046014 GCTCCCACTATCCATGATATCTTGT 60.046 44.000 15.33 3.24 0.00 3.16
5288 14134 4.820897 TGATATCTTGTGAGCGAAGTGTT 58.179 39.130 3.98 0.00 0.00 3.32
5303 14149 0.454196 GTGTTGAACACCTTGCGGTT 59.546 50.000 17.24 0.00 42.13 4.44
5315 14161 3.041940 GCGGTTGTGGTGGAGACG 61.042 66.667 0.00 0.00 0.00 4.18
5346 14192 3.792736 GCACCACGGCCTCCCATA 61.793 66.667 0.00 0.00 0.00 2.74
5351 14197 2.040606 ACGGCCTCCCATACAGGT 59.959 61.111 0.00 0.00 34.66 4.00
5391 14237 2.206182 GACAAGGGCGGTATGGGGTT 62.206 60.000 0.00 0.00 0.00 4.11
5404 14250 2.264794 GGGTTGATGGACGTCGCT 59.735 61.111 9.92 0.00 0.00 4.93
5430 14276 3.532542 GCCATGGTTTCTCTAGTACCAC 58.467 50.000 14.67 0.00 44.16 4.16
5459 14305 2.517402 AAAGCCCACAAACGCCGA 60.517 55.556 0.00 0.00 0.00 5.54
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.325472 CGTACAAGTGTCTATTTTCCGTCC 59.675 45.833 0.00 0.00 0.00 4.79
1 2 4.919754 ACGTACAAGTGTCTATTTTCCGTC 59.080 41.667 0.00 0.00 0.00 4.79
3 4 5.834239 AACGTACAAGTGTCTATTTTCCG 57.166 39.130 0.00 0.00 0.00 4.30
4 5 8.524870 TCTAAACGTACAAGTGTCTATTTTCC 57.475 34.615 0.00 0.00 0.00 3.13
5 6 9.953825 CATCTAAACGTACAAGTGTCTATTTTC 57.046 33.333 0.00 0.00 0.00 2.29
6 7 8.932791 CCATCTAAACGTACAAGTGTCTATTTT 58.067 33.333 0.00 0.00 0.00 1.82
7 8 8.308931 TCCATCTAAACGTACAAGTGTCTATTT 58.691 33.333 0.00 0.00 0.00 1.40
8 9 7.758528 GTCCATCTAAACGTACAAGTGTCTATT 59.241 37.037 0.00 0.00 0.00 1.73
9 10 7.256286 GTCCATCTAAACGTACAAGTGTCTAT 58.744 38.462 0.00 0.00 0.00 1.98
10 11 6.615088 GTCCATCTAAACGTACAAGTGTCTA 58.385 40.000 0.00 0.00 0.00 2.59
11 12 5.467705 GTCCATCTAAACGTACAAGTGTCT 58.532 41.667 0.00 0.00 0.00 3.41
12 13 4.322804 CGTCCATCTAAACGTACAAGTGTC 59.677 45.833 0.00 0.00 34.30 3.67
13 14 4.232221 CGTCCATCTAAACGTACAAGTGT 58.768 43.478 0.00 0.00 34.30 3.55
14 15 3.060363 GCGTCCATCTAAACGTACAAGTG 59.940 47.826 0.00 0.00 40.87 3.16
15 16 3.248266 GCGTCCATCTAAACGTACAAGT 58.752 45.455 0.00 0.00 40.87 3.16
16 17 3.247442 TGCGTCCATCTAAACGTACAAG 58.753 45.455 0.00 0.00 40.87 3.16
17 18 3.300852 TGCGTCCATCTAAACGTACAA 57.699 42.857 0.00 0.00 40.87 2.41
18 19 3.513680 ATGCGTCCATCTAAACGTACA 57.486 42.857 0.00 0.00 40.87 2.90
19 20 3.000925 CCAATGCGTCCATCTAAACGTAC 59.999 47.826 0.00 0.00 40.87 3.67
20 21 3.191669 CCAATGCGTCCATCTAAACGTA 58.808 45.455 0.00 0.00 40.87 3.57
21 22 2.006888 CCAATGCGTCCATCTAAACGT 58.993 47.619 0.00 0.00 40.87 3.99
22 23 1.330521 CCCAATGCGTCCATCTAAACG 59.669 52.381 0.00 0.00 41.68 3.60
23 24 2.354821 GACCCAATGCGTCCATCTAAAC 59.645 50.000 0.00 0.00 0.00 2.01
24 25 2.026729 TGACCCAATGCGTCCATCTAAA 60.027 45.455 0.00 0.00 0.00 1.85
25 26 1.557371 TGACCCAATGCGTCCATCTAA 59.443 47.619 0.00 0.00 0.00 2.10
26 27 1.134521 GTGACCCAATGCGTCCATCTA 60.135 52.381 0.00 0.00 0.00 1.98
27 28 0.392998 GTGACCCAATGCGTCCATCT 60.393 55.000 0.00 0.00 0.00 2.90
28 29 1.705337 CGTGACCCAATGCGTCCATC 61.705 60.000 0.00 0.00 0.00 3.51
29 30 1.745115 CGTGACCCAATGCGTCCAT 60.745 57.895 0.00 0.00 0.00 3.41
30 31 2.178876 ATCGTGACCCAATGCGTCCA 62.179 55.000 0.00 0.00 0.00 4.02
31 32 1.024579 AATCGTGACCCAATGCGTCC 61.025 55.000 0.00 0.00 0.00 4.79
32 33 0.373716 GAATCGTGACCCAATGCGTC 59.626 55.000 0.00 0.00 0.00 5.19
33 34 1.024579 GGAATCGTGACCCAATGCGT 61.025 55.000 0.00 0.00 0.00 5.24
34 35 1.721487 GGAATCGTGACCCAATGCG 59.279 57.895 0.00 0.00 0.00 4.73
35 36 1.721487 CGGAATCGTGACCCAATGC 59.279 57.895 0.00 0.00 0.00 3.56
36 37 1.024046 TGCGGAATCGTGACCCAATG 61.024 55.000 0.00 0.00 38.89 2.82
37 38 1.024579 GTGCGGAATCGTGACCCAAT 61.025 55.000 0.00 0.00 38.89 3.16
38 39 1.669760 GTGCGGAATCGTGACCCAA 60.670 57.895 0.00 0.00 38.89 4.12
39 40 2.047655 GTGCGGAATCGTGACCCA 60.048 61.111 0.00 0.00 38.89 4.51
40 41 2.546645 TACGTGCGGAATCGTGACCC 62.547 60.000 0.00 0.00 40.50 4.46
41 42 1.153978 TACGTGCGGAATCGTGACC 60.154 57.895 0.00 0.00 40.50 4.02
42 43 0.730155 TGTACGTGCGGAATCGTGAC 60.730 55.000 0.00 0.00 40.50 3.67
43 44 0.455464 CTGTACGTGCGGAATCGTGA 60.455 55.000 6.63 0.00 40.50 4.35
44 45 0.731514 ACTGTACGTGCGGAATCGTG 60.732 55.000 19.93 0.00 40.50 4.35
45 46 0.455633 GACTGTACGTGCGGAATCGT 60.456 55.000 19.93 0.00 42.82 3.73
46 47 0.455464 TGACTGTACGTGCGGAATCG 60.455 55.000 19.93 0.00 39.81 3.34
47 48 1.135489 TCTGACTGTACGTGCGGAATC 60.135 52.381 19.93 7.75 0.00 2.52
48 49 0.885879 TCTGACTGTACGTGCGGAAT 59.114 50.000 19.93 0.00 0.00 3.01
49 50 0.039798 GTCTGACTGTACGTGCGGAA 60.040 55.000 19.93 6.00 0.00 4.30
50 51 1.577922 GTCTGACTGTACGTGCGGA 59.422 57.895 19.93 0.00 0.00 5.54
51 52 1.796355 CGTCTGACTGTACGTGCGG 60.796 63.158 11.24 11.24 34.48 5.69
52 53 2.426183 GCGTCTGACTGTACGTGCG 61.426 63.158 6.21 0.00 41.10 5.34
53 54 2.426183 CGCGTCTGACTGTACGTGC 61.426 63.158 6.21 0.00 41.90 5.34
54 55 3.737182 CGCGTCTGACTGTACGTG 58.263 61.111 6.21 2.64 42.34 4.49
55 56 0.659417 CAACGCGTCTGACTGTACGT 60.659 55.000 14.44 7.58 41.10 3.57
56 57 1.334992 CCAACGCGTCTGACTGTACG 61.335 60.000 14.44 6.98 41.92 3.67
57 58 0.039798 TCCAACGCGTCTGACTGTAC 60.040 55.000 14.44 0.00 0.00 2.90
58 59 0.240145 CTCCAACGCGTCTGACTGTA 59.760 55.000 14.44 0.00 0.00 2.74
59 60 1.007271 CTCCAACGCGTCTGACTGT 60.007 57.895 14.44 1.58 0.00 3.55
60 61 0.597637 AACTCCAACGCGTCTGACTG 60.598 55.000 14.44 6.55 0.00 3.51
61 62 0.956633 TAACTCCAACGCGTCTGACT 59.043 50.000 14.44 0.00 0.00 3.41
62 63 1.058404 GTAACTCCAACGCGTCTGAC 58.942 55.000 14.44 3.58 0.00 3.51
63 64 0.956633 AGTAACTCCAACGCGTCTGA 59.043 50.000 14.44 11.58 0.00 3.27
64 65 1.060713 CAGTAACTCCAACGCGTCTG 58.939 55.000 14.44 13.20 0.00 3.51
65 66 0.672342 ACAGTAACTCCAACGCGTCT 59.328 50.000 14.44 0.00 0.00 4.18
79 80 2.490903 GCGGGTCACTCTCTTTACAGTA 59.509 50.000 0.00 0.00 0.00 2.74
80 81 1.272769 GCGGGTCACTCTCTTTACAGT 59.727 52.381 0.00 0.00 0.00 3.55
81 82 1.272490 TGCGGGTCACTCTCTTTACAG 59.728 52.381 0.00 0.00 0.00 2.74
83 84 2.271800 CATGCGGGTCACTCTCTTTAC 58.728 52.381 0.00 0.00 0.00 2.01
121 122 3.521529 GATCGATCACAGCCCCCGG 62.522 68.421 20.52 0.00 0.00 5.73
142 146 0.528466 TCCATCTCATCAAGCGCGAC 60.528 55.000 12.10 0.04 0.00 5.19
151 159 2.611292 CGCCAGTTTTCTCCATCTCATC 59.389 50.000 0.00 0.00 0.00 2.92
154 162 2.100605 ACGCCAGTTTTCTCCATCTC 57.899 50.000 0.00 0.00 0.00 2.75
216 224 1.675641 AAATGCCGCTCCAGACACC 60.676 57.895 0.00 0.00 0.00 4.16
281 289 3.630148 CCACGATCGCCGCATCAC 61.630 66.667 16.60 0.00 43.32 3.06
320 2446 4.189188 GCATGCAGGAGCGCCAAG 62.189 66.667 14.21 1.38 46.23 3.61
348 2474 6.126940 TGGTAGGGTAGTACTGTACAGTAGAG 60.127 46.154 31.32 6.74 43.84 2.43
350 2476 5.994250 TGGTAGGGTAGTACTGTACAGTAG 58.006 45.833 31.32 7.50 43.84 2.57
354 2480 4.539726 CCATGGTAGGGTAGTACTGTACA 58.460 47.826 19.27 0.00 0.00 2.90
365 2491 0.839946 GAGATGTGCCATGGTAGGGT 59.160 55.000 14.67 0.00 0.00 4.34
372 2498 1.227764 CGAGGGGAGATGTGCCATG 60.228 63.158 1.98 0.00 35.30 3.66
377 2503 3.083349 TGGGCGAGGGGAGATGTG 61.083 66.667 0.00 0.00 0.00 3.21
378 2504 3.083997 GTGGGCGAGGGGAGATGT 61.084 66.667 0.00 0.00 0.00 3.06
387 2513 3.770040 TCCGGTGATGTGGGCGAG 61.770 66.667 0.00 0.00 0.00 5.03
400 2526 2.656069 ATCCCACGTTGGAGTCCGG 61.656 63.158 14.41 0.00 40.96 5.14
411 2537 0.887836 CAGCCATGATCCATCCCACG 60.888 60.000 0.00 0.00 0.00 4.94
442 2568 3.934391 GACTTCACTCACGGGCGGG 62.934 68.421 0.00 0.00 0.00 6.13
443 2569 2.432628 GACTTCACTCACGGGCGG 60.433 66.667 0.00 0.00 0.00 6.13
504 3893 5.568392 TGTATCACCATGCATGCCAATATA 58.432 37.500 21.69 12.11 0.00 0.86
505 3894 4.409187 TGTATCACCATGCATGCCAATAT 58.591 39.130 21.69 11.35 0.00 1.28
506 3895 3.822167 CTGTATCACCATGCATGCCAATA 59.178 43.478 21.69 13.67 0.00 1.90
507 3896 2.626266 CTGTATCACCATGCATGCCAAT 59.374 45.455 21.69 14.61 0.00 3.16
508 3897 2.025898 CTGTATCACCATGCATGCCAA 58.974 47.619 21.69 8.29 0.00 4.52
509 3898 1.682740 CTGTATCACCATGCATGCCA 58.317 50.000 21.69 7.03 0.00 4.92
510 3899 0.313043 GCTGTATCACCATGCATGCC 59.687 55.000 21.69 4.72 0.00 4.40
511 3900 0.313043 GGCTGTATCACCATGCATGC 59.687 55.000 21.69 11.82 0.00 4.06
537 3941 1.179174 TAGGATGATGCGACGGGGAG 61.179 60.000 0.00 0.00 0.00 4.30
546 3950 2.681706 CATCTGGTCGTAGGATGATGC 58.318 52.381 10.68 0.00 39.12 3.91
608 6995 1.736645 GTTGGCTCTTGCGACGCTA 60.737 57.895 22.08 13.01 40.82 4.26
618 7005 2.032681 GCCTCGTTGGTTGGCTCT 59.967 61.111 0.00 0.00 43.05 4.09
621 7008 3.056328 GGAGCCTCGTTGGTTGGC 61.056 66.667 0.00 0.00 46.42 4.52
638 7025 3.656045 GGCGTGGTTGGACCGTTG 61.656 66.667 0.00 0.00 42.58 4.10
1046 8622 1.299976 GGGGGACTGGTAACTGCTG 59.700 63.158 0.00 0.00 39.52 4.41
1103 8680 4.179599 GGAGAGGAGGGGAGGGGG 62.180 77.778 0.00 0.00 0.00 5.40
1104 8681 3.039526 AGGAGAGGAGGGGAGGGG 61.040 72.222 0.00 0.00 0.00 4.79
1105 8682 2.018086 AGAGGAGAGGAGGGGAGGG 61.018 68.421 0.00 0.00 0.00 4.30
1116 8693 0.996762 GGGGAGGGAGAGAGAGGAGA 60.997 65.000 0.00 0.00 0.00 3.71
1159 8742 1.675415 GGAGAAGAAGCTGCAGGAGTG 60.675 57.143 17.12 0.00 0.00 3.51
1168 8751 0.620121 CTGGGGGAGGAGAAGAAGCT 60.620 60.000 0.00 0.00 0.00 3.74
1196 9190 2.845550 CGATGGATCGGAGGACGCA 61.846 63.158 0.88 0.00 45.93 5.24
1206 9200 2.208431 CTGCTTCTGTTCCGATGGATC 58.792 52.381 0.00 0.00 0.00 3.36
1207 9201 1.134280 CCTGCTTCTGTTCCGATGGAT 60.134 52.381 0.00 0.00 0.00 3.41
1208 9202 0.250234 CCTGCTTCTGTTCCGATGGA 59.750 55.000 0.00 0.00 0.00 3.41
1209 9203 0.745845 CCCTGCTTCTGTTCCGATGG 60.746 60.000 0.00 0.00 0.00 3.51
1210 9204 1.372087 GCCCTGCTTCTGTTCCGATG 61.372 60.000 0.00 0.00 0.00 3.84
1211 9205 1.078143 GCCCTGCTTCTGTTCCGAT 60.078 57.895 0.00 0.00 0.00 4.18
1212 9206 2.347490 GCCCTGCTTCTGTTCCGA 59.653 61.111 0.00 0.00 0.00 4.55
1213 9207 2.747855 GGCCCTGCTTCTGTTCCG 60.748 66.667 0.00 0.00 0.00 4.30
1214 9208 2.747855 CGGCCCTGCTTCTGTTCC 60.748 66.667 0.00 0.00 0.00 3.62
1215 9209 2.032681 ACGGCCCTGCTTCTGTTC 59.967 61.111 0.00 0.00 0.00 3.18
1216 9210 2.032681 GACGGCCCTGCTTCTGTT 59.967 61.111 0.00 0.00 0.00 3.16
1217 9211 2.527951 GATGACGGCCCTGCTTCTGT 62.528 60.000 0.00 0.00 0.00 3.41
1218 9212 1.817099 GATGACGGCCCTGCTTCTG 60.817 63.158 0.00 0.00 0.00 3.02
1219 9213 2.586792 GATGACGGCCCTGCTTCT 59.413 61.111 0.00 0.00 0.00 2.85
1220 9214 2.514824 GGATGACGGCCCTGCTTC 60.515 66.667 0.00 0.00 0.00 3.86
1221 9215 4.473520 CGGATGACGGCCCTGCTT 62.474 66.667 0.00 0.00 39.42 3.91
1260 9254 2.279784 CTCCTCGGATTGCTCGGC 60.280 66.667 0.00 0.00 0.00 5.54
1284 9278 1.348036 GCACCTGGTTCTGGTTCTAGT 59.652 52.381 0.00 0.00 33.44 2.57
1286 9280 0.320374 CGCACCTGGTTCTGGTTCTA 59.680 55.000 0.00 0.00 33.44 2.10
1303 9303 2.192624 GAGAAGATGAAGAGAGCACGC 58.807 52.381 0.00 0.00 0.00 5.34
1315 9315 2.190578 GGCGGTGGGGAGAAGATG 59.809 66.667 0.00 0.00 0.00 2.90
1327 9327 1.819632 GGAATGAGATTGCGGCGGT 60.820 57.895 9.78 0.00 0.00 5.68
1356 9364 0.824759 CAGTCCGGGGAGAGTTTAGG 59.175 60.000 0.00 0.00 0.00 2.69
1360 9368 1.609794 GTCCAGTCCGGGGAGAGTT 60.610 63.158 0.00 0.00 34.44 3.01
1361 9369 2.037527 GTCCAGTCCGGGGAGAGT 59.962 66.667 0.00 0.00 34.44 3.24
1374 9384 4.424711 GGGCAGGAATGGCGTCCA 62.425 66.667 9.46 1.01 40.48 4.02
1478 9501 3.446516 CACCAACCACCTACTACTACTCC 59.553 52.174 0.00 0.00 0.00 3.85
1479 9502 4.085009 ACACCAACCACCTACTACTACTC 58.915 47.826 0.00 0.00 0.00 2.59
1482 9505 4.744237 AGAACACCAACCACCTACTACTA 58.256 43.478 0.00 0.00 0.00 1.82
1483 9506 3.584294 AGAACACCAACCACCTACTACT 58.416 45.455 0.00 0.00 0.00 2.57
1496 9521 2.231964 ACGGCGACTAATAAGAACACCA 59.768 45.455 16.62 0.00 0.00 4.17
1497 9522 2.884827 ACGGCGACTAATAAGAACACC 58.115 47.619 16.62 0.00 0.00 4.16
1510 9535 2.167861 GGCTCTGATCAACGGCGAC 61.168 63.158 16.62 0.00 0.00 5.19
1511 9536 2.184322 GGCTCTGATCAACGGCGA 59.816 61.111 16.62 0.00 0.00 5.54
1561 9594 7.805071 GGAAAACACATGTCTCAACTAATCTTG 59.195 37.037 0.00 0.00 0.00 3.02
1575 9608 3.807622 CGTGTACAGAGGAAAACACATGT 59.192 43.478 0.00 0.00 41.79 3.21
1609 9648 2.610859 AATCCCACCCCGCTGTCT 60.611 61.111 0.00 0.00 0.00 3.41
1641 9680 3.062234 CCTTATTTTCTCGCGGACAGAAC 59.938 47.826 6.13 0.00 29.30 3.01
1644 9683 2.888594 TCCTTATTTTCTCGCGGACAG 58.111 47.619 6.13 0.00 0.00 3.51
1657 9696 8.314021 GGAGGAACACAAAATTTGATCCTTATT 58.686 33.333 22.64 9.70 39.76 1.40
1659 9698 6.780031 TGGAGGAACACAAAATTTGATCCTTA 59.220 34.615 22.64 16.19 39.76 2.69
1667 9707 4.099419 GTGGAGTGGAGGAACACAAAATTT 59.901 41.667 0.00 0.00 43.72 1.82
1714 9754 8.849168 TGAGAAATAAACTGAATCAGCAAGAAA 58.151 29.630 10.62 0.00 34.37 2.52
1752 9796 7.031226 TCTTTTTGATCCAGTTCACTGAAAG 57.969 36.000 8.61 8.84 46.59 2.62
1860 9904 4.321899 GGCCAAGAACTTGAAATGTATGCA 60.322 41.667 14.99 0.00 42.93 3.96
1878 9922 3.000233 GCCATTTTCCCCGGCCAA 61.000 61.111 2.24 0.00 40.07 4.52
1887 9931 5.333568 GCAACAGAAGTTCAATGCCATTTTC 60.334 40.000 5.50 0.00 35.28 2.29
1931 9976 2.803956 GCTTTGTAGTACTTGCGTTCCA 59.196 45.455 0.00 0.00 0.00 3.53
1977 10022 1.207791 GATGTGGATGGACCCTGAGT 58.792 55.000 0.00 0.00 38.00 3.41
1985 10030 1.688735 GTCGAGATGGATGTGGATGGA 59.311 52.381 0.00 0.00 0.00 3.41
2143 10191 7.307455 GGAGCTAATTAAGACTATTTTGGAGCG 60.307 40.741 0.00 0.00 0.00 5.03
2239 10287 3.385755 GCAAGATCCCCTTTACATGCAAT 59.614 43.478 0.00 0.00 31.42 3.56
2267 10315 2.412525 CAACCGTGCAAGCAAGCA 59.587 55.556 0.00 0.00 43.35 3.91
2268 10316 2.348605 TTCCAACCGTGCAAGCAAGC 62.349 55.000 0.00 0.00 0.00 4.01
2269 10317 0.102120 TTTCCAACCGTGCAAGCAAG 59.898 50.000 0.00 0.00 0.00 4.01
2357 10406 1.821216 CCACCAACCGCTGAGTATTT 58.179 50.000 0.00 0.00 0.00 1.40
2366 10415 2.049248 CAACATGCCACCAACCGC 60.049 61.111 0.00 0.00 0.00 5.68
2402 10451 4.714308 CCTGAGTGAATCTAAAGGGAGAGT 59.286 45.833 0.00 0.00 0.00 3.24
2405 10454 5.428184 AACCTGAGTGAATCTAAAGGGAG 57.572 43.478 0.00 0.00 35.54 4.30
2447 10496 6.148480 CACCAACTAGAGACATGAAAAAGGAG 59.852 42.308 0.00 0.00 0.00 3.69
2460 10509 2.434336 AGCACAACACACCAACTAGAGA 59.566 45.455 0.00 0.00 0.00 3.10
2461 10510 2.838736 AGCACAACACACCAACTAGAG 58.161 47.619 0.00 0.00 0.00 2.43
2463 10512 2.480419 GCTAGCACAACACACCAACTAG 59.520 50.000 10.63 0.00 0.00 2.57
2502 10556 1.084289 ATCGCCGTCCTAAAAAGCAC 58.916 50.000 0.00 0.00 0.00 4.40
2528 10583 4.022589 GTGTGTACTGACAGTGCTAACCTA 60.023 45.833 22.03 0.61 35.82 3.08
2543 10598 0.670546 GCAGATGTGGCGTGTGTACT 60.671 55.000 0.00 0.00 0.00 2.73
2544 10599 0.670546 AGCAGATGTGGCGTGTGTAC 60.671 55.000 0.00 0.00 36.08 2.90
2552 10607 3.515330 AAAATAGCAAGCAGATGTGGC 57.485 42.857 0.00 0.00 0.00 5.01
2588 10643 5.359576 AGGTGATGAGCTGACTCTAAGTAAG 59.640 44.000 0.00 0.00 43.85 2.34
2593 10648 4.774726 AGAAAGGTGATGAGCTGACTCTAA 59.225 41.667 0.00 0.00 43.85 2.10
2594 10649 4.348486 AGAAAGGTGATGAGCTGACTCTA 58.652 43.478 0.00 0.00 43.85 2.43
2601 10656 3.795688 TTCCAAGAAAGGTGATGAGCT 57.204 42.857 0.00 0.00 0.00 4.09
2605 10660 6.276832 ACATGATTTCCAAGAAAGGTGATG 57.723 37.500 0.00 0.00 0.00 3.07
2652 11104 2.134789 ATTCATCAAGGCACCAGACC 57.865 50.000 0.00 0.00 0.00 3.85
2830 11282 5.598830 CCTGACCTACCACTATCAGTACAAT 59.401 44.000 0.00 0.00 37.47 2.71
2836 11288 2.388735 TGCCTGACCTACCACTATCAG 58.611 52.381 0.00 0.00 38.65 2.90
2895 11347 5.628193 CCGATATGATTACGGTGTTGAGTAC 59.372 44.000 0.00 0.00 41.47 2.73
2954 11406 6.961042 ACCAAATCTCATTTTATTGGCCATT 58.039 32.000 6.09 5.63 43.39 3.16
2983 11435 6.773638 ACAAAAGTCTGATCAATAGAGTGGT 58.226 36.000 0.00 0.00 0.00 4.16
2989 11441 7.137490 TCTGCAACAAAAGTCTGATCAATAG 57.863 36.000 0.00 0.00 0.00 1.73
3041 11493 7.308830 GGCTCTCAATATCCAATACCACATTTC 60.309 40.741 0.00 0.00 0.00 2.17
3064 11516 2.116125 GGGTTGTTGAGGCAGGCT 59.884 61.111 0.00 0.00 0.00 4.58
3081 11533 2.679837 ACTTCCAGTGCAGCATTTATCG 59.320 45.455 0.00 0.00 0.00 2.92
3208 11664 2.683859 GCGGTTTGGACCCTTACGC 61.684 63.158 5.23 5.23 43.42 4.42
3227 11683 4.095400 ACCGCCCCTCCTCTCCAT 62.095 66.667 0.00 0.00 0.00 3.41
3417 11875 2.636830 GAGCAAAAGCAGCTAGGATCA 58.363 47.619 0.00 0.00 43.58 2.92
3666 12130 3.310303 CGAATCGGAAATTGACTCTGC 57.690 47.619 0.00 0.00 0.00 4.26
3697 12163 3.545426 GGTTATTACTGTCGAATTGCGGC 60.545 47.826 0.00 0.00 46.88 6.53
3700 12166 5.447279 CCAGTGGTTATTACTGTCGAATTGC 60.447 44.000 0.00 0.00 43.05 3.56
3702 12168 5.642063 CACCAGTGGTTATTACTGTCGAATT 59.358 40.000 13.62 0.00 43.05 2.17
3703 12169 5.175859 CACCAGTGGTTATTACTGTCGAAT 58.824 41.667 13.62 0.00 43.05 3.34
3704 12170 4.562082 CACCAGTGGTTATTACTGTCGAA 58.438 43.478 13.62 0.00 43.05 3.71
3705 12171 3.615592 GCACCAGTGGTTATTACTGTCGA 60.616 47.826 13.62 0.00 43.05 4.20
3707 12173 3.939066 AGCACCAGTGGTTATTACTGTC 58.061 45.455 13.62 0.00 43.05 3.51
3743 12240 4.402155 TGGAACAACTGCAGTGAAGAAAAT 59.598 37.500 22.49 0.00 31.92 1.82
3748 12245 3.188048 GAGATGGAACAACTGCAGTGAAG 59.812 47.826 22.49 15.86 43.03 3.02
3751 12248 2.483106 CTGAGATGGAACAACTGCAGTG 59.517 50.000 22.49 16.62 43.03 3.66
3763 12260 1.942776 TCTGCTCCAACTGAGATGGA 58.057 50.000 11.17 11.17 44.42 3.41
3973 12470 2.436824 GAGGAGAAAGGCGGGCAC 60.437 66.667 3.78 0.00 0.00 5.01
3977 12474 0.615850 AAAGAGGAGGAGAAAGGCGG 59.384 55.000 0.00 0.00 0.00 6.13
3978 12475 3.055747 AGTTAAAGAGGAGGAGAAAGGCG 60.056 47.826 0.00 0.00 0.00 5.52
3979 12476 4.509616 GAGTTAAAGAGGAGGAGAAAGGC 58.490 47.826 0.00 0.00 0.00 4.35
3980 12477 4.221041 ACGAGTTAAAGAGGAGGAGAAAGG 59.779 45.833 0.00 0.00 0.00 3.11
3981 12478 5.394224 ACGAGTTAAAGAGGAGGAGAAAG 57.606 43.478 0.00 0.00 0.00 2.62
3982 12479 5.803237 AACGAGTTAAAGAGGAGGAGAAA 57.197 39.130 0.00 0.00 0.00 2.52
3985 12482 8.248945 TGTAATAAACGAGTTAAAGAGGAGGAG 58.751 37.037 0.00 0.00 0.00 3.69
3988 12485 8.983307 ACTGTAATAAACGAGTTAAAGAGGAG 57.017 34.615 0.00 0.00 0.00 3.69
3989 12486 8.579006 TGACTGTAATAAACGAGTTAAAGAGGA 58.421 33.333 0.00 0.00 0.00 3.71
3992 12489 7.326789 CGGTGACTGTAATAAACGAGTTAAAGA 59.673 37.037 0.00 0.00 0.00 2.52
3993 12490 7.115378 ACGGTGACTGTAATAAACGAGTTAAAG 59.885 37.037 0.00 0.00 0.00 1.85
3994 12491 6.922957 ACGGTGACTGTAATAAACGAGTTAAA 59.077 34.615 0.00 0.00 0.00 1.52
3995 12492 6.446318 ACGGTGACTGTAATAAACGAGTTAA 58.554 36.000 0.00 0.00 0.00 2.01
3997 12494 4.874970 ACGGTGACTGTAATAAACGAGTT 58.125 39.130 0.00 0.00 0.00 3.01
3998 12495 4.510038 ACGGTGACTGTAATAAACGAGT 57.490 40.909 0.00 0.00 0.00 4.18
3999 12496 4.090930 CCAACGGTGACTGTAATAAACGAG 59.909 45.833 0.00 0.00 0.00 4.18
4000 12497 3.989167 CCAACGGTGACTGTAATAAACGA 59.011 43.478 0.00 0.00 0.00 3.85
4001 12498 3.423907 GCCAACGGTGACTGTAATAAACG 60.424 47.826 0.00 0.00 0.00 3.60
4002 12499 3.749609 AGCCAACGGTGACTGTAATAAAC 59.250 43.478 0.00 0.00 0.00 2.01
4004 12501 3.331150 CAGCCAACGGTGACTGTAATAA 58.669 45.455 8.83 0.00 40.02 1.40
4005 12502 2.933492 GCAGCCAACGGTGACTGTAATA 60.933 50.000 18.40 0.00 40.02 0.98
4006 12503 1.808411 CAGCCAACGGTGACTGTAAT 58.192 50.000 8.83 0.00 40.02 1.89
4012 12541 4.030452 GCAGCAGCCAACGGTGAC 62.030 66.667 0.00 0.00 40.02 3.67
4017 12546 0.390340 TTAGAGAGCAGCAGCCAACG 60.390 55.000 0.00 0.00 43.56 4.10
4019 12548 0.036010 GGTTAGAGAGCAGCAGCCAA 60.036 55.000 0.00 0.00 43.56 4.52
4027 12556 1.640917 AGGAAACGGGTTAGAGAGCA 58.359 50.000 0.00 0.00 0.00 4.26
4037 12566 1.533625 TTGCATGAGAAGGAAACGGG 58.466 50.000 0.00 0.00 0.00 5.28
4040 12569 4.217118 ACAGACATTGCATGAGAAGGAAAC 59.783 41.667 0.00 0.00 0.00 2.78
4050 12579 2.063266 GGCACAAACAGACATTGCATG 58.937 47.619 0.00 0.00 34.76 4.06
4051 12580 1.965643 AGGCACAAACAGACATTGCAT 59.034 42.857 0.00 0.00 34.76 3.96
4052 12581 1.337703 GAGGCACAAACAGACATTGCA 59.662 47.619 0.00 0.00 34.76 4.08
4053 12582 1.336240 GGAGGCACAAACAGACATTGC 60.336 52.381 0.00 0.00 0.00 3.56
4054 12583 1.270550 GGGAGGCACAAACAGACATTG 59.729 52.381 0.00 0.00 0.00 2.82
4056 12585 0.773644 AGGGAGGCACAAACAGACAT 59.226 50.000 0.00 0.00 0.00 3.06
4057 12586 0.179020 CAGGGAGGCACAAACAGACA 60.179 55.000 0.00 0.00 0.00 3.41
4058 12587 0.108585 TCAGGGAGGCACAAACAGAC 59.891 55.000 0.00 0.00 0.00 3.51
4059 12588 0.108585 GTCAGGGAGGCACAAACAGA 59.891 55.000 0.00 0.00 0.00 3.41
4060 12589 0.179020 TGTCAGGGAGGCACAAACAG 60.179 55.000 0.00 0.00 0.00 3.16
4062 12591 0.890996 CCTGTCAGGGAGGCACAAAC 60.891 60.000 11.46 0.00 0.00 2.93
4063 12592 1.352622 ACCTGTCAGGGAGGCACAAA 61.353 55.000 23.06 0.00 40.58 2.83
4066 12595 2.665603 GACCTGTCAGGGAGGCAC 59.334 66.667 23.06 3.72 40.58 5.01
4067 12596 2.997315 CGACCTGTCAGGGAGGCA 60.997 66.667 23.06 0.00 40.58 4.75
4068 12597 2.680352 TCGACCTGTCAGGGAGGC 60.680 66.667 23.06 8.30 40.58 4.70
4069 12598 2.716017 GCTCGACCTGTCAGGGAGG 61.716 68.421 23.06 11.22 40.58 4.30
4070 12599 2.888863 GCTCGACCTGTCAGGGAG 59.111 66.667 23.06 19.51 40.58 4.30
4071 12600 3.062466 CGCTCGACCTGTCAGGGA 61.062 66.667 23.06 10.40 40.58 4.20
4072 12601 3.374402 ACGCTCGACCTGTCAGGG 61.374 66.667 23.06 6.32 40.58 4.45
4073 12602 2.126307 CACGCTCGACCTGTCAGG 60.126 66.667 17.88 17.88 42.49 3.86
4151 12680 0.519519 CACGCCGCCAATGTAAAGAA 59.480 50.000 0.00 0.00 0.00 2.52
4227 12769 2.044492 ACAGTAGTCCTTCATCTCCCCA 59.956 50.000 0.00 0.00 0.00 4.96
4240 12782 5.513495 GCATCGCTATAATGCTACAGTAGTC 59.487 44.000 9.42 2.71 44.83 2.59
4304 12849 3.268330 CCTGACTGTGTCATCTCCATTG 58.732 50.000 0.65 0.00 41.94 2.82
4328 12873 2.202492 CCGCTTGGTCGAGACGAG 60.202 66.667 0.00 0.00 36.23 4.18
4329 12874 2.981909 ACCGCTTGGTCGAGACGA 60.982 61.111 0.00 0.00 45.05 4.20
4331 12876 3.112709 GCACCGCTTGGTCGAGAC 61.113 66.667 0.00 0.00 45.05 3.36
4332 12877 3.282745 GAGCACCGCTTGGTCGAGA 62.283 63.158 0.00 0.00 45.05 4.04
4348 12898 2.887568 GGCGGCAGTGATGACGAG 60.888 66.667 7.84 0.00 44.30 4.18
4394 12944 6.969669 GTACACAACGGAAGAAAATTTCTG 57.030 37.500 9.21 0.00 40.59 3.02
4513 13179 1.201424 AAGGAGTGGGGTTCGTATCC 58.799 55.000 0.00 0.00 0.00 2.59
4515 13181 1.280998 CCAAAGGAGTGGGGTTCGTAT 59.719 52.381 0.00 0.00 34.77 3.06
4517 13183 1.454539 CCAAAGGAGTGGGGTTCGT 59.545 57.895 0.00 0.00 34.77 3.85
4519 13185 0.895559 CAGCCAAAGGAGTGGGGTTC 60.896 60.000 0.00 0.00 39.26 3.62
4520 13186 1.153756 CAGCCAAAGGAGTGGGGTT 59.846 57.895 0.00 0.00 39.26 4.11
4521 13187 2.846532 CAGCCAAAGGAGTGGGGT 59.153 61.111 0.00 0.00 39.26 4.95
4522 13188 2.677875 GCAGCCAAAGGAGTGGGG 60.678 66.667 0.00 0.00 39.26 4.96
4523 13189 1.975407 CAGCAGCCAAAGGAGTGGG 60.975 63.158 0.00 0.00 39.26 4.61
4525 13191 0.538057 TTCCAGCAGCCAAAGGAGTG 60.538 55.000 0.00 0.00 0.00 3.51
4526 13192 0.251077 CTTCCAGCAGCCAAAGGAGT 60.251 55.000 0.00 0.00 0.00 3.85
4527 13193 1.593296 GCTTCCAGCAGCCAAAGGAG 61.593 60.000 0.00 0.00 41.89 3.69
4529 13195 2.968206 GCTTCCAGCAGCCAAAGG 59.032 61.111 0.00 0.00 41.89 3.11
4531 13197 1.968017 CTCGCTTCCAGCAGCCAAA 60.968 57.895 0.00 0.00 42.58 3.28
4532 13198 2.359107 CTCGCTTCCAGCAGCCAA 60.359 61.111 0.00 0.00 42.58 4.52
4533 13199 3.306595 CTCTCGCTTCCAGCAGCCA 62.307 63.158 0.00 0.00 42.58 4.75
4534 13200 2.511145 CTCTCGCTTCCAGCAGCC 60.511 66.667 0.00 0.00 42.58 4.85
4535 13201 1.079543 TTCTCTCGCTTCCAGCAGC 60.080 57.895 0.00 0.00 42.58 5.25
4537 13203 0.900182 TCCTTCTCTCGCTTCCAGCA 60.900 55.000 0.00 0.00 42.58 4.41
4538 13204 0.179113 CTCCTTCTCTCGCTTCCAGC 60.179 60.000 0.00 0.00 38.02 4.85
4539 13205 0.179113 GCTCCTTCTCTCGCTTCCAG 60.179 60.000 0.00 0.00 0.00 3.86
4540 13206 1.608717 GGCTCCTTCTCTCGCTTCCA 61.609 60.000 0.00 0.00 0.00 3.53
4541 13207 1.142965 GGCTCCTTCTCTCGCTTCC 59.857 63.158 0.00 0.00 0.00 3.46
4542 13208 1.226831 CGGCTCCTTCTCTCGCTTC 60.227 63.158 0.00 0.00 0.00 3.86
4543 13209 1.979693 ACGGCTCCTTCTCTCGCTT 60.980 57.895 0.00 0.00 0.00 4.68
4544 13210 2.361865 ACGGCTCCTTCTCTCGCT 60.362 61.111 0.00 0.00 0.00 4.93
4545 13211 2.202676 CACGGCTCCTTCTCTCGC 60.203 66.667 0.00 0.00 0.00 5.03
4546 13212 1.137825 GACACGGCTCCTTCTCTCG 59.862 63.158 0.00 0.00 0.00 4.04
4548 13214 0.540830 ACTGACACGGCTCCTTCTCT 60.541 55.000 0.00 0.00 0.00 3.10
4549 13215 0.109039 GACTGACACGGCTCCTTCTC 60.109 60.000 0.00 0.00 0.00 2.87
4550 13216 1.536943 GGACTGACACGGCTCCTTCT 61.537 60.000 0.00 0.00 0.00 2.85
4551 13217 1.079750 GGACTGACACGGCTCCTTC 60.080 63.158 0.00 0.00 0.00 3.46
4552 13218 2.932234 CGGACTGACACGGCTCCTT 61.932 63.158 0.00 0.00 0.00 3.36
4554 13220 2.227089 AATCGGACTGACACGGCTCC 62.227 60.000 0.00 0.00 0.00 4.70
4555 13221 0.802607 GAATCGGACTGACACGGCTC 60.803 60.000 0.00 0.00 0.00 4.70
4557 13223 0.460284 ATGAATCGGACTGACACGGC 60.460 55.000 0.00 0.00 0.00 5.68
4558 13224 2.010145 AATGAATCGGACTGACACGG 57.990 50.000 0.00 0.00 0.00 4.94
4560 13226 5.332355 GCGTAATAATGAATCGGACTGACAC 60.332 44.000 0.00 0.00 0.00 3.67
4561 13227 4.743151 GCGTAATAATGAATCGGACTGACA 59.257 41.667 0.00 0.00 0.00 3.58
4562 13228 4.150098 GGCGTAATAATGAATCGGACTGAC 59.850 45.833 0.00 0.00 0.00 3.51
4564 13230 3.432252 GGGCGTAATAATGAATCGGACTG 59.568 47.826 0.00 0.00 0.00 3.51
4565 13231 3.556423 GGGGCGTAATAATGAATCGGACT 60.556 47.826 0.00 0.00 0.00 3.85
4566 13232 2.740447 GGGGCGTAATAATGAATCGGAC 59.260 50.000 0.00 0.00 0.00 4.79
4568 13234 2.081462 GGGGGCGTAATAATGAATCGG 58.919 52.381 0.00 0.00 0.00 4.18
4570 13236 2.817844 GGTGGGGGCGTAATAATGAATC 59.182 50.000 0.00 0.00 0.00 2.52
4571 13237 2.175931 TGGTGGGGGCGTAATAATGAAT 59.824 45.455 0.00 0.00 0.00 2.57
4572 13238 1.564818 TGGTGGGGGCGTAATAATGAA 59.435 47.619 0.00 0.00 0.00 2.57
4573 13239 1.134037 GTGGTGGGGGCGTAATAATGA 60.134 52.381 0.00 0.00 0.00 2.57
4574 13240 1.314730 GTGGTGGGGGCGTAATAATG 58.685 55.000 0.00 0.00 0.00 1.90
4575 13241 0.184211 GGTGGTGGGGGCGTAATAAT 59.816 55.000 0.00 0.00 0.00 1.28
4576 13242 0.915387 AGGTGGTGGGGGCGTAATAA 60.915 55.000 0.00 0.00 0.00 1.40
4577 13243 1.307170 AGGTGGTGGGGGCGTAATA 60.307 57.895 0.00 0.00 0.00 0.98
4578 13244 2.612746 AGGTGGTGGGGGCGTAAT 60.613 61.111 0.00 0.00 0.00 1.89
4579 13245 3.324108 GAGGTGGTGGGGGCGTAA 61.324 66.667 0.00 0.00 0.00 3.18
4709 13390 1.082104 GGAAAAAGTCGGCAGCGTG 60.082 57.895 0.00 0.00 0.00 5.34
4714 13395 1.028905 CCAACAGGAAAAAGTCGGCA 58.971 50.000 0.00 0.00 0.00 5.69
4716 13397 1.028905 TGCCAACAGGAAAAAGTCGG 58.971 50.000 0.00 0.00 0.00 4.79
4718 13399 2.687935 TGAGTGCCAACAGGAAAAAGTC 59.312 45.455 0.00 0.00 0.00 3.01
4818 13499 4.912395 TTGCACACCCACCCAGCC 62.912 66.667 0.00 0.00 0.00 4.85
4821 13502 2.916703 GCATTGCACACCCACCCA 60.917 61.111 3.15 0.00 0.00 4.51
4822 13503 2.506061 TTGCATTGCACACCCACCC 61.506 57.895 11.66 0.00 38.71 4.61
4823 13504 1.300853 GTTGCATTGCACACCCACC 60.301 57.895 11.66 0.00 38.71 4.61
4824 13505 1.300853 GGTTGCATTGCACACCCAC 60.301 57.895 22.16 13.98 38.71 4.61
4864 13545 4.608948 TTCTGAGTCTGGGAAGAAGAAC 57.391 45.455 0.00 0.00 0.00 3.01
4865 13546 5.545723 AGATTTCTGAGTCTGGGAAGAAGAA 59.454 40.000 0.00 0.00 30.77 2.52
4870 13551 3.269178 GCAGATTTCTGAGTCTGGGAAG 58.731 50.000 11.70 0.68 46.59 3.46
4873 13554 1.407989 GGGCAGATTTCTGAGTCTGGG 60.408 57.143 11.70 1.73 46.59 4.45
4878 13559 1.078143 GCGGGGCAGATTTCTGAGT 60.078 57.895 11.70 0.00 46.59 3.41
4879 13560 1.094073 CAGCGGGGCAGATTTCTGAG 61.094 60.000 11.70 1.07 46.59 3.35
4880 13561 1.078214 CAGCGGGGCAGATTTCTGA 60.078 57.895 11.70 0.00 46.59 3.27
4881 13562 2.768492 GCAGCGGGGCAGATTTCTG 61.768 63.158 3.13 3.13 46.40 3.02
4883 13564 3.880846 CGCAGCGGGGCAGATTTC 61.881 66.667 7.00 0.00 0.00 2.17
4885 13566 4.845580 CTCGCAGCGGGGCAGATT 62.846 66.667 16.42 0.00 0.00 2.40
4892 13573 4.514577 AACGGATCTCGCAGCGGG 62.515 66.667 16.42 12.93 43.89 6.13
4893 13574 3.257561 CAACGGATCTCGCAGCGG 61.258 66.667 16.42 5.91 43.89 5.52
4895 13576 2.456119 CCACAACGGATCTCGCAGC 61.456 63.158 3.85 0.00 43.89 5.25
4896 13577 0.389817 TTCCACAACGGATCTCGCAG 60.390 55.000 3.85 0.47 45.80 5.18
4897 13578 0.249120 ATTCCACAACGGATCTCGCA 59.751 50.000 3.85 0.00 45.80 5.10
4900 13581 3.190874 GACAGATTCCACAACGGATCTC 58.809 50.000 0.00 0.00 45.80 2.75
4951 13632 0.375803 GTGCTTTTGAACGGTCGTGT 59.624 50.000 0.00 0.00 0.00 4.49
4980 13661 1.083489 TCGTTGGCCAATCATTCGTC 58.917 50.000 23.66 4.81 0.00 4.20
4983 13664 4.552767 CGTAGAATCGTTGGCCAATCATTC 60.553 45.833 28.81 28.81 0.00 2.67
5012 13693 2.862140 GCCACAAAATCCGTCAGTTTGG 60.862 50.000 8.75 0.00 36.72 3.28
5129 13951 9.743057 TTCTTTTCGATGTATTTGTGACAATTT 57.257 25.926 0.00 0.00 0.00 1.82
5130 13952 9.743057 TTTCTTTTCGATGTATTTGTGACAATT 57.257 25.926 0.00 0.00 0.00 2.32
5131 13953 9.743057 TTTTCTTTTCGATGTATTTGTGACAAT 57.257 25.926 0.00 0.00 0.00 2.71
5132 13954 9.743057 ATTTTCTTTTCGATGTATTTGTGACAA 57.257 25.926 0.00 0.00 0.00 3.18
5133 13955 9.179552 CATTTTCTTTTCGATGTATTTGTGACA 57.820 29.630 0.00 0.00 0.00 3.58
5167 13989 2.489329 ACATGTGCAAACCAGTAGATGC 59.511 45.455 0.00 0.00 39.22 3.91
5202 14048 4.322009 CGTGATTAGCATACTCATACGCAG 59.678 45.833 0.00 0.00 32.69 5.18
5225 14071 9.403110 GAGTTCACCAATATCATCATAAAATGC 57.597 33.333 0.00 0.00 0.00 3.56
5237 14083 2.158957 TGGGAGCGAGTTCACCAATATC 60.159 50.000 0.00 0.00 0.00 1.63
5239 14085 1.066430 GTGGGAGCGAGTTCACCAATA 60.066 52.381 0.00 0.00 32.19 1.90
5254 14100 6.084060 TCACAAGATATCATGGATAGTGGGA 58.916 40.000 12.29 0.00 0.00 4.37
5261 14107 4.879197 TCGCTCACAAGATATCATGGAT 57.121 40.909 12.29 0.00 0.00 3.41
5268 14114 4.820897 TCAACACTTCGCTCACAAGATAT 58.179 39.130 0.00 0.00 0.00 1.63
5271 14117 2.595124 TCAACACTTCGCTCACAAGA 57.405 45.000 0.00 0.00 0.00 3.02
5300 14146 3.041940 CGCGTCTCCACCACAACC 61.042 66.667 0.00 0.00 0.00 3.77
5315 14161 2.486966 GTGCTCTTCATTGGCCGC 59.513 61.111 0.00 0.00 0.00 6.53
5346 14192 3.118956 GCTTCTACAGTCATGCTACCTGT 60.119 47.826 10.54 10.54 41.93 4.00
5351 14197 2.359214 CTCCGCTTCTACAGTCATGCTA 59.641 50.000 0.00 0.00 0.00 3.49
5391 14237 4.794439 CGCCAGCGACGTCCATCA 62.794 66.667 10.58 0.00 42.83 3.07
5404 14250 1.558167 TAGAGAAACCATGGCCGCCA 61.558 55.000 16.17 16.17 38.19 5.69
5430 14276 3.488090 GGCTTTCTTCGTCGCCGG 61.488 66.667 0.00 0.00 32.22 6.13
5459 14305 3.244249 CCCTCTTTCGGAGAAGTTCTTGT 60.244 47.826 6.88 0.00 45.90 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.