Multiple sequence alignment - TraesCS2A01G546800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G546800 chr2A 100.000 5717 0 0 526 6242 755361378 755355662 0.000000e+00 10558.0
1 TraesCS2A01G546800 chr2A 95.655 1749 67 4 1429 3170 56515346 56517092 0.000000e+00 2800.0
2 TraesCS2A01G546800 chr2A 99.448 543 2 1 5700 6242 755347589 755347048 0.000000e+00 985.0
3 TraesCS2A01G546800 chr2A 100.000 287 0 0 1 287 755361903 755361617 1.190000e-146 531.0
4 TraesCS2A01G546800 chr2A 82.677 254 37 7 27 275 549672009 549671758 1.050000e-52 219.0
5 TraesCS2A01G546800 chr3B 96.845 2314 67 5 3170 5481 782021775 782024084 0.000000e+00 3864.0
6 TraesCS2A01G546800 chr3B 95.060 911 38 5 526 1432 782020875 782021782 0.000000e+00 1426.0
7 TraesCS2A01G546800 chr3B 82.522 452 65 4 994 1432 16673721 16673271 9.820000e-103 385.0
8 TraesCS2A01G546800 chr2D 95.506 2314 93 7 3170 5480 355481480 355483785 0.000000e+00 3687.0
9 TraesCS2A01G546800 chr2D 92.174 920 58 10 526 1432 355480569 355481487 0.000000e+00 1288.0
10 TraesCS2A01G546800 chr2D 90.792 467 31 5 5014 5480 193993453 193993907 1.150000e-171 614.0
11 TraesCS2A01G546800 chr2D 84.171 398 30 15 526 911 193993031 193993407 7.700000e-94 355.0
12 TraesCS2A01G546800 chr2D 94.000 50 3 0 1117 1166 193993403 193993452 6.710000e-10 76.8
13 TraesCS2A01G546800 chr5A 95.205 2315 101 8 3170 5480 315534713 315537021 0.000000e+00 3651.0
14 TraesCS2A01G546800 chr5A 95.660 1751 66 3 1430 3170 600147326 600145576 0.000000e+00 2804.0
15 TraesCS2A01G546800 chr5A 89.946 925 74 14 526 1432 315533797 315534720 0.000000e+00 1175.0
16 TraesCS2A01G546800 chr7D 89.569 2320 224 12 3170 5482 23562318 23564626 0.000000e+00 2928.0
17 TraesCS2A01G546800 chr7D 89.483 2320 226 12 3170 5482 14171775 14169467 0.000000e+00 2916.0
18 TraesCS2A01G546800 chr7D 89.435 2319 227 12 3170 5481 135768329 135770636 0.000000e+00 2909.0
19 TraesCS2A01G546800 chr7D 89.315 2321 224 16 3170 5480 135764726 135762420 0.000000e+00 2891.0
20 TraesCS2A01G546800 chr7D 94.305 439 23 2 741 1177 59901217 59901655 0.000000e+00 671.0
21 TraesCS2A01G546800 chr7D 95.349 258 11 1 1175 1432 59901760 59902016 5.820000e-110 409.0
22 TraesCS2A01G546800 chr7D 79.015 467 65 11 996 1429 14172236 14171770 7.920000e-74 289.0
23 TraesCS2A01G546800 chr7D 79.015 467 65 11 996 1429 23561857 23562323 7.920000e-74 289.0
24 TraesCS2A01G546800 chr7D 79.015 467 65 11 996 1429 135765187 135764721 7.920000e-74 289.0
25 TraesCS2A01G546800 chr7D 78.632 468 65 13 996 1429 8079569 8080035 1.710000e-70 278.0
26 TraesCS2A01G546800 chr7A 96.798 1749 48 2 1429 3171 710586791 710588537 0.000000e+00 2913.0
27 TraesCS2A01G546800 chr7A 96.512 1749 53 2 1429 3171 707717540 707715794 0.000000e+00 2885.0
28 TraesCS2A01G546800 chr7A 96.305 1759 55 4 1423 3175 707723240 707721486 0.000000e+00 2880.0
29 TraesCS2A01G546800 chr7A 96.178 1753 57 7 1430 3175 728438215 728439964 0.000000e+00 2857.0
30 TraesCS2A01G546800 chr7A 95.968 1761 61 4 1423 3175 710581082 710582840 0.000000e+00 2850.0
31 TraesCS2A01G546800 chr7A 95.831 1751 58 8 1429 3170 13289857 13291601 0.000000e+00 2815.0
32 TraesCS2A01G546800 chr7A 95.556 1755 66 6 1429 3175 16584280 16582530 0.000000e+00 2798.0
33 TraesCS2A01G546800 chr7A 98.346 544 7 2 5700 6242 275683271 275682729 0.000000e+00 953.0
34 TraesCS2A01G546800 chr7A 98.343 543 7 2 5700 6242 616913442 616913982 0.000000e+00 952.0
35 TraesCS2A01G546800 chr5D 89.301 2318 230 12 3170 5480 460677227 460679533 0.000000e+00 2891.0
36 TraesCS2A01G546800 chr5D 90.011 911 69 10 526 1432 7882399 7883291 0.000000e+00 1158.0
37 TraesCS2A01G546800 chr5D 90.327 734 50 6 526 1255 7909270 7908554 0.000000e+00 942.0
38 TraesCS2A01G546800 chr5D 87.160 662 43 16 526 1166 450668458 450667818 0.000000e+00 713.0
39 TraesCS2A01G546800 chr5D 92.291 467 26 4 5014 5480 450667817 450667361 0.000000e+00 654.0
40 TraesCS2A01G546800 chr5D 79.229 467 64 11 996 1429 460676766 460677232 1.700000e-75 294.0
41 TraesCS2A01G546800 chr5D 82.677 254 35 9 27 274 420453541 420453291 3.790000e-52 217.0
42 TraesCS2A01G546800 chr6D 89.258 2318 229 14 3170 5479 402531971 402529666 0.000000e+00 2883.0
43 TraesCS2A01G546800 chr6D 78.587 467 67 11 996 1429 402532432 402531966 1.710000e-70 278.0
44 TraesCS2A01G546800 chr1B 98.527 543 7 1 5700 6242 390329539 390330080 0.000000e+00 957.0
45 TraesCS2A01G546800 chr1B 91.346 104 6 3 928 1031 9590762 9590862 8.440000e-29 139.0
46 TraesCS2A01G546800 chrUn 98.343 543 7 2 5700 6242 277724406 277723866 0.000000e+00 952.0
47 TraesCS2A01G546800 chrUn 98.343 543 8 1 5700 6242 384757399 384757940 0.000000e+00 952.0
48 TraesCS2A01G546800 chrUn 79.015 467 65 11 996 1429 95717487 95717953 7.920000e-74 289.0
49 TraesCS2A01G546800 chr7B 98.346 544 6 3 5700 6242 254312830 254312289 0.000000e+00 952.0
50 TraesCS2A01G546800 chr7B 83.019 212 31 5 67 275 428044814 428045023 2.970000e-43 187.0
51 TraesCS2A01G546800 chr6B 98.343 543 7 2 5700 6242 498401164 498400624 0.000000e+00 952.0
52 TraesCS2A01G546800 chr3A 98.343 543 8 1 5700 6242 127612095 127611554 0.000000e+00 952.0
53 TraesCS2A01G546800 chr4D 86.707 662 46 15 526 1166 483639809 483639169 0.000000e+00 697.0
54 TraesCS2A01G546800 chr4D 91.435 467 29 5 5014 5480 483639168 483638713 1.140000e-176 630.0
55 TraesCS2A01G546800 chr6A 78.678 469 63 15 996 1429 108919104 108918638 1.710000e-70 278.0
56 TraesCS2A01G546800 chr1D 87.500 72 8 1 204 275 311928825 311928895 1.440000e-11 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G546800 chr2A 755355662 755361903 6241 True 5544.5 10558 100.000000 1 6242 2 chr2A.!!$R3 6241
1 TraesCS2A01G546800 chr2A 56515346 56517092 1746 False 2800.0 2800 95.655000 1429 3170 1 chr2A.!!$F1 1741
2 TraesCS2A01G546800 chr2A 755347048 755347589 541 True 985.0 985 99.448000 5700 6242 1 chr2A.!!$R2 542
3 TraesCS2A01G546800 chr3B 782020875 782024084 3209 False 2645.0 3864 95.952500 526 5481 2 chr3B.!!$F1 4955
4 TraesCS2A01G546800 chr2D 355480569 355483785 3216 False 2487.5 3687 93.840000 526 5480 2 chr2D.!!$F2 4954
5 TraesCS2A01G546800 chr2D 193993031 193993907 876 False 348.6 614 89.654333 526 5480 3 chr2D.!!$F1 4954
6 TraesCS2A01G546800 chr5A 600145576 600147326 1750 True 2804.0 2804 95.660000 1430 3170 1 chr5A.!!$R1 1740
7 TraesCS2A01G546800 chr5A 315533797 315537021 3224 False 2413.0 3651 92.575500 526 5480 2 chr5A.!!$F1 4954
8 TraesCS2A01G546800 chr7D 135768329 135770636 2307 False 2909.0 2909 89.435000 3170 5481 1 chr7D.!!$F2 2311
9 TraesCS2A01G546800 chr7D 23561857 23564626 2769 False 1608.5 2928 84.292000 996 5482 2 chr7D.!!$F3 4486
10 TraesCS2A01G546800 chr7D 14169467 14172236 2769 True 1602.5 2916 84.249000 996 5482 2 chr7D.!!$R1 4486
11 TraesCS2A01G546800 chr7D 135762420 135765187 2767 True 1590.0 2891 84.165000 996 5480 2 chr7D.!!$R2 4484
12 TraesCS2A01G546800 chr7D 59901217 59902016 799 False 540.0 671 94.827000 741 1432 2 chr7D.!!$F4 691
13 TraesCS2A01G546800 chr7A 707715794 707723240 7446 True 2882.5 2885 96.408500 1423 3175 2 chr7A.!!$R3 1752
14 TraesCS2A01G546800 chr7A 710581082 710588537 7455 False 2881.5 2913 96.383000 1423 3175 2 chr7A.!!$F4 1752
15 TraesCS2A01G546800 chr7A 728438215 728439964 1749 False 2857.0 2857 96.178000 1430 3175 1 chr7A.!!$F3 1745
16 TraesCS2A01G546800 chr7A 13289857 13291601 1744 False 2815.0 2815 95.831000 1429 3170 1 chr7A.!!$F1 1741
17 TraesCS2A01G546800 chr7A 16582530 16584280 1750 True 2798.0 2798 95.556000 1429 3175 1 chr7A.!!$R1 1746
18 TraesCS2A01G546800 chr7A 275682729 275683271 542 True 953.0 953 98.346000 5700 6242 1 chr7A.!!$R2 542
19 TraesCS2A01G546800 chr7A 616913442 616913982 540 False 952.0 952 98.343000 5700 6242 1 chr7A.!!$F2 542
20 TraesCS2A01G546800 chr5D 460676766 460679533 2767 False 1592.5 2891 84.265000 996 5480 2 chr5D.!!$F2 4484
21 TraesCS2A01G546800 chr5D 7882399 7883291 892 False 1158.0 1158 90.011000 526 1432 1 chr5D.!!$F1 906
22 TraesCS2A01G546800 chr5D 7908554 7909270 716 True 942.0 942 90.327000 526 1255 1 chr5D.!!$R1 729
23 TraesCS2A01G546800 chr5D 450667361 450668458 1097 True 683.5 713 89.725500 526 5480 2 chr5D.!!$R3 4954
24 TraesCS2A01G546800 chr6D 402529666 402532432 2766 True 1580.5 2883 83.922500 996 5479 2 chr6D.!!$R1 4483
25 TraesCS2A01G546800 chr1B 390329539 390330080 541 False 957.0 957 98.527000 5700 6242 1 chr1B.!!$F2 542
26 TraesCS2A01G546800 chrUn 277723866 277724406 540 True 952.0 952 98.343000 5700 6242 1 chrUn.!!$R1 542
27 TraesCS2A01G546800 chrUn 384757399 384757940 541 False 952.0 952 98.343000 5700 6242 1 chrUn.!!$F2 542
28 TraesCS2A01G546800 chr7B 254312289 254312830 541 True 952.0 952 98.346000 5700 6242 1 chr7B.!!$R1 542
29 TraesCS2A01G546800 chr6B 498400624 498401164 540 True 952.0 952 98.343000 5700 6242 1 chr6B.!!$R1 542
30 TraesCS2A01G546800 chr3A 127611554 127612095 541 True 952.0 952 98.343000 5700 6242 1 chr3A.!!$R1 542
31 TraesCS2A01G546800 chr4D 483638713 483639809 1096 True 663.5 697 89.071000 526 5480 2 chr4D.!!$R1 4954

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
112 113 0.035056 CCAAAGCCACCGAATCCTCT 60.035 55.000 0.00 0.0 0.00 3.69 F
281 282 0.037790 AACCGCAGCTTGACTCTCTC 60.038 55.000 0.00 0.0 0.00 3.20 F
283 284 0.179140 CCGCAGCTTGACTCTCTCTC 60.179 60.000 0.00 0.0 0.00 3.20 F
775 804 0.534427 CGATGGCCTGACTGCATCAT 60.534 55.000 3.32 0.0 36.48 2.45 F
1866 7755 0.977395 AAGGTGCTCTACAGGTGTCC 59.023 55.000 0.00 0.0 0.00 4.02 F
3071 8979 0.818296 ACGCTTCTGCTTCGGTCTAT 59.182 50.000 0.00 0.0 36.97 1.98 F
3707 9617 1.606668 TCTTGCTTGCGGTGTTAAAGG 59.393 47.619 0.00 0.0 0.00 3.11 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1996 7885 1.001378 GTAATGCATCATCCCGCAACC 60.001 52.381 0.00 0.00 42.37 3.77 R
2073 7962 3.195661 GTTACTTGCCCGAGATTCGATT 58.804 45.455 0.00 0.00 43.74 3.34 R
2260 8149 3.904571 ACTGTCATCGTAACGTTAAGCA 58.095 40.909 15.31 7.53 0.00 3.91 R
2414 8303 1.877443 CGAAATCACCCGGAACACTTT 59.123 47.619 0.73 0.00 0.00 2.66 R
3685 9595 1.669604 TTAACACCGCAAGCAAGACA 58.330 45.000 0.00 0.00 0.00 3.41 R
3942 9853 0.036306 ACCCTTGTCCACGAACATCC 59.964 55.000 0.00 0.00 0.00 3.51 R
5449 11367 0.034089 CAAGGATTTCGAAGGCCCCT 60.034 55.000 12.99 8.70 0.00 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.934068 GTACTCTCAACCCGGAATTTCA 58.066 45.455 0.73 0.00 0.00 2.69
22 23 3.502123 ACTCTCAACCCGGAATTTCAA 57.498 42.857 0.73 0.00 0.00 2.69
23 24 4.034285 ACTCTCAACCCGGAATTTCAAT 57.966 40.909 0.73 0.00 0.00 2.57
24 25 5.174037 ACTCTCAACCCGGAATTTCAATA 57.826 39.130 0.73 0.00 0.00 1.90
25 26 5.566469 ACTCTCAACCCGGAATTTCAATAA 58.434 37.500 0.73 0.00 0.00 1.40
26 27 5.414765 ACTCTCAACCCGGAATTTCAATAAC 59.585 40.000 0.73 0.00 0.00 1.89
27 28 5.317808 TCTCAACCCGGAATTTCAATAACA 58.682 37.500 0.73 0.00 0.00 2.41
28 29 5.770663 TCTCAACCCGGAATTTCAATAACAA 59.229 36.000 0.73 0.00 0.00 2.83
29 30 6.435904 TCTCAACCCGGAATTTCAATAACAAT 59.564 34.615 0.73 0.00 0.00 2.71
30 31 6.626302 TCAACCCGGAATTTCAATAACAATC 58.374 36.000 0.73 0.00 0.00 2.67
31 32 6.209589 TCAACCCGGAATTTCAATAACAATCA 59.790 34.615 0.73 0.00 0.00 2.57
32 33 6.790232 ACCCGGAATTTCAATAACAATCAT 57.210 33.333 0.73 0.00 0.00 2.45
33 34 6.805713 ACCCGGAATTTCAATAACAATCATC 58.194 36.000 0.73 0.00 0.00 2.92
34 35 6.379703 ACCCGGAATTTCAATAACAATCATCA 59.620 34.615 0.73 0.00 0.00 3.07
35 36 7.093552 ACCCGGAATTTCAATAACAATCATCAA 60.094 33.333 0.73 0.00 0.00 2.57
36 37 7.222611 CCCGGAATTTCAATAACAATCATCAAC 59.777 37.037 0.73 0.00 0.00 3.18
37 38 7.758980 CCGGAATTTCAATAACAATCATCAACA 59.241 33.333 0.00 0.00 0.00 3.33
38 39 8.586273 CGGAATTTCAATAACAATCATCAACAC 58.414 33.333 0.00 0.00 0.00 3.32
39 40 9.421806 GGAATTTCAATAACAATCATCAACACA 57.578 29.630 0.00 0.00 0.00 3.72
42 43 8.760103 TTTCAATAACAATCATCAACACATGG 57.240 30.769 0.00 0.00 0.00 3.66
43 44 7.700022 TCAATAACAATCATCAACACATGGA 57.300 32.000 0.00 0.00 0.00 3.41
44 45 7.537715 TCAATAACAATCATCAACACATGGAC 58.462 34.615 0.00 0.00 0.00 4.02
45 46 7.176340 TCAATAACAATCATCAACACATGGACA 59.824 33.333 0.00 0.00 0.00 4.02
46 47 4.771590 ACAATCATCAACACATGGACAC 57.228 40.909 0.00 0.00 0.00 3.67
47 48 3.507233 ACAATCATCAACACATGGACACC 59.493 43.478 0.00 0.00 0.00 4.16
48 49 2.947127 TCATCAACACATGGACACCA 57.053 45.000 0.00 0.00 38.19 4.17
49 50 2.781923 TCATCAACACATGGACACCAG 58.218 47.619 0.00 0.00 36.75 4.00
50 51 2.371510 TCATCAACACATGGACACCAGA 59.628 45.455 0.00 0.00 36.75 3.86
51 52 3.009363 TCATCAACACATGGACACCAGAT 59.991 43.478 0.00 0.00 36.75 2.90
52 53 3.507162 TCAACACATGGACACCAGATT 57.493 42.857 0.00 0.00 36.75 2.40
53 54 3.831323 TCAACACATGGACACCAGATTT 58.169 40.909 0.00 0.00 36.75 2.17
54 55 4.214310 TCAACACATGGACACCAGATTTT 58.786 39.130 0.00 0.00 36.75 1.82
55 56 5.380900 TCAACACATGGACACCAGATTTTA 58.619 37.500 0.00 0.00 36.75 1.52
56 57 5.240623 TCAACACATGGACACCAGATTTTAC 59.759 40.000 0.00 0.00 36.75 2.01
57 58 4.724399 ACACATGGACACCAGATTTTACA 58.276 39.130 0.00 0.00 36.75 2.41
58 59 5.324409 ACACATGGACACCAGATTTTACAT 58.676 37.500 0.00 0.00 36.75 2.29
59 60 6.480763 ACACATGGACACCAGATTTTACATA 58.519 36.000 0.00 0.00 36.75 2.29
60 61 6.945435 ACACATGGACACCAGATTTTACATAA 59.055 34.615 0.00 0.00 36.75 1.90
61 62 7.450014 ACACATGGACACCAGATTTTACATAAA 59.550 33.333 0.00 0.00 36.75 1.40
62 63 8.303156 CACATGGACACCAGATTTTACATAAAA 58.697 33.333 0.00 0.00 36.75 1.52
63 64 8.865090 ACATGGACACCAGATTTTACATAAAAA 58.135 29.630 0.00 0.00 38.00 1.94
99 100 3.723772 AAAAACCATGGGCCAAAGC 57.276 47.368 18.09 0.00 38.76 3.51
109 110 2.885113 GCCAAAGCCACCGAATCC 59.115 61.111 0.00 0.00 0.00 3.01
110 111 1.678970 GCCAAAGCCACCGAATCCT 60.679 57.895 0.00 0.00 0.00 3.24
111 112 1.657751 GCCAAAGCCACCGAATCCTC 61.658 60.000 0.00 0.00 0.00 3.71
112 113 0.035056 CCAAAGCCACCGAATCCTCT 60.035 55.000 0.00 0.00 0.00 3.69
113 114 1.614317 CCAAAGCCACCGAATCCTCTT 60.614 52.381 0.00 0.00 0.00 2.85
114 115 1.740025 CAAAGCCACCGAATCCTCTTC 59.260 52.381 0.00 0.00 0.00 2.87
115 116 0.253327 AAGCCACCGAATCCTCTTCC 59.747 55.000 0.00 0.00 0.00 3.46
116 117 0.618968 AGCCACCGAATCCTCTTCCT 60.619 55.000 0.00 0.00 0.00 3.36
117 118 0.179070 GCCACCGAATCCTCTTCCTC 60.179 60.000 0.00 0.00 0.00 3.71
118 119 1.195115 CCACCGAATCCTCTTCCTCA 58.805 55.000 0.00 0.00 0.00 3.86
119 120 1.555075 CCACCGAATCCTCTTCCTCAA 59.445 52.381 0.00 0.00 0.00 3.02
120 121 2.171448 CCACCGAATCCTCTTCCTCAAT 59.829 50.000 0.00 0.00 0.00 2.57
121 122 3.370953 CCACCGAATCCTCTTCCTCAATT 60.371 47.826 0.00 0.00 0.00 2.32
122 123 4.141711 CCACCGAATCCTCTTCCTCAATTA 60.142 45.833 0.00 0.00 0.00 1.40
123 124 5.455326 CCACCGAATCCTCTTCCTCAATTAT 60.455 44.000 0.00 0.00 0.00 1.28
124 125 6.239600 CCACCGAATCCTCTTCCTCAATTATA 60.240 42.308 0.00 0.00 0.00 0.98
125 126 7.217200 CACCGAATCCTCTTCCTCAATTATAA 58.783 38.462 0.00 0.00 0.00 0.98
126 127 7.715249 CACCGAATCCTCTTCCTCAATTATAAA 59.285 37.037 0.00 0.00 0.00 1.40
127 128 8.440771 ACCGAATCCTCTTCCTCAATTATAAAT 58.559 33.333 0.00 0.00 0.00 1.40
128 129 8.725148 CCGAATCCTCTTCCTCAATTATAAATG 58.275 37.037 0.00 0.00 0.00 2.32
129 130 9.277783 CGAATCCTCTTCCTCAATTATAAATGT 57.722 33.333 0.57 0.00 0.00 2.71
131 132 9.927081 AATCCTCTTCCTCAATTATAAATGTGT 57.073 29.630 0.57 0.00 0.00 3.72
132 133 8.737168 TCCTCTTCCTCAATTATAAATGTGTG 57.263 34.615 0.57 0.00 0.00 3.82
133 134 8.548025 TCCTCTTCCTCAATTATAAATGTGTGA 58.452 33.333 0.57 0.00 0.00 3.58
134 135 9.347240 CCTCTTCCTCAATTATAAATGTGTGAT 57.653 33.333 0.57 0.00 0.00 3.06
163 164 9.543783 AACAAGTTCTTCTTTAGGTAACACTAG 57.456 33.333 0.00 0.00 34.18 2.57
164 165 8.921205 ACAAGTTCTTCTTTAGGTAACACTAGA 58.079 33.333 0.00 0.00 34.18 2.43
165 166 9.413048 CAAGTTCTTCTTTAGGTAACACTAGAG 57.587 37.037 0.00 0.00 34.18 2.43
166 167 8.124808 AGTTCTTCTTTAGGTAACACTAGAGG 57.875 38.462 0.00 0.00 41.41 3.69
167 168 6.527057 TCTTCTTTAGGTAACACTAGAGGC 57.473 41.667 0.00 0.00 41.41 4.70
168 169 6.254522 TCTTCTTTAGGTAACACTAGAGGCT 58.745 40.000 0.00 0.00 41.41 4.58
169 170 6.377712 TCTTCTTTAGGTAACACTAGAGGCTC 59.622 42.308 6.34 6.34 41.41 4.70
170 171 5.828871 TCTTTAGGTAACACTAGAGGCTCT 58.171 41.667 22.48 22.48 41.41 4.09
171 172 5.887035 TCTTTAGGTAACACTAGAGGCTCTC 59.113 44.000 22.53 4.29 41.41 3.20
172 173 3.741245 AGGTAACACTAGAGGCTCTCA 57.259 47.619 22.53 6.89 41.41 3.27
173 174 3.358118 AGGTAACACTAGAGGCTCTCAC 58.642 50.000 22.53 10.02 41.41 3.51
174 175 3.090037 GGTAACACTAGAGGCTCTCACA 58.910 50.000 22.53 2.28 32.06 3.58
175 176 3.119424 GGTAACACTAGAGGCTCTCACAC 60.119 52.174 22.53 11.04 32.06 3.82
176 177 2.294449 ACACTAGAGGCTCTCACACA 57.706 50.000 22.53 1.42 32.06 3.72
177 178 2.813907 ACACTAGAGGCTCTCACACAT 58.186 47.619 22.53 0.00 32.06 3.21
178 179 2.757868 ACACTAGAGGCTCTCACACATC 59.242 50.000 22.53 0.00 32.06 3.06
179 180 2.757314 CACTAGAGGCTCTCACACATCA 59.243 50.000 22.53 0.00 32.06 3.07
180 181 3.194329 CACTAGAGGCTCTCACACATCAA 59.806 47.826 22.53 0.00 32.06 2.57
181 182 3.446873 ACTAGAGGCTCTCACACATCAAG 59.553 47.826 22.53 11.79 32.06 3.02
182 183 2.533916 AGAGGCTCTCACACATCAAGA 58.466 47.619 12.24 0.00 32.06 3.02
183 184 3.106054 AGAGGCTCTCACACATCAAGAT 58.894 45.455 12.24 0.00 32.06 2.40
184 185 3.518705 AGAGGCTCTCACACATCAAGATT 59.481 43.478 12.24 0.00 32.06 2.40
185 186 4.019501 AGAGGCTCTCACACATCAAGATTT 60.020 41.667 12.24 0.00 32.06 2.17
186 187 4.260170 AGGCTCTCACACATCAAGATTTC 58.740 43.478 0.00 0.00 0.00 2.17
187 188 4.019501 AGGCTCTCACACATCAAGATTTCT 60.020 41.667 0.00 0.00 0.00 2.52
188 189 5.188555 AGGCTCTCACACATCAAGATTTCTA 59.811 40.000 0.00 0.00 0.00 2.10
189 190 5.293079 GGCTCTCACACATCAAGATTTCTAC 59.707 44.000 0.00 0.00 0.00 2.59
190 191 5.871524 GCTCTCACACATCAAGATTTCTACA 59.128 40.000 0.00 0.00 0.00 2.74
191 192 6.538021 GCTCTCACACATCAAGATTTCTACAT 59.462 38.462 0.00 0.00 0.00 2.29
192 193 7.254387 GCTCTCACACATCAAGATTTCTACATC 60.254 40.741 0.00 0.00 0.00 3.06
193 194 7.614494 TCTCACACATCAAGATTTCTACATCA 58.386 34.615 0.00 0.00 0.00 3.07
194 195 8.262933 TCTCACACATCAAGATTTCTACATCAT 58.737 33.333 0.00 0.00 0.00 2.45
195 196 8.205131 TCACACATCAAGATTTCTACATCATG 57.795 34.615 0.00 0.00 0.00 3.07
196 197 8.042515 TCACACATCAAGATTTCTACATCATGA 58.957 33.333 0.00 0.00 35.82 3.07
197 198 8.671028 CACACATCAAGATTTCTACATCATGAA 58.329 33.333 0.00 0.00 35.20 2.57
198 199 9.404848 ACACATCAAGATTTCTACATCATGAAT 57.595 29.630 0.00 0.00 35.20 2.57
217 218 8.739039 TCATGAATAGTAACAACAAGATTTGGG 58.261 33.333 0.00 0.00 34.12 4.12
218 219 8.739039 CATGAATAGTAACAACAAGATTTGGGA 58.261 33.333 0.00 0.00 34.12 4.37
219 220 8.106247 TGAATAGTAACAACAAGATTTGGGAC 57.894 34.615 0.00 0.00 34.12 4.46
220 221 7.942341 TGAATAGTAACAACAAGATTTGGGACT 59.058 33.333 0.00 0.00 32.96 3.85
221 222 7.687941 ATAGTAACAACAAGATTTGGGACTG 57.312 36.000 0.00 0.00 31.57 3.51
222 223 3.733443 AACAACAAGATTTGGGACTGC 57.267 42.857 0.00 0.00 34.12 4.40
223 224 2.665165 ACAACAAGATTTGGGACTGCA 58.335 42.857 0.00 0.00 34.12 4.41
224 225 3.030291 ACAACAAGATTTGGGACTGCAA 58.970 40.909 0.00 0.00 34.12 4.08
225 226 3.068590 ACAACAAGATTTGGGACTGCAAG 59.931 43.478 0.00 0.00 35.52 4.01
226 227 3.228188 ACAAGATTTGGGACTGCAAGA 57.772 42.857 0.00 0.00 33.92 3.02
227 228 3.771216 ACAAGATTTGGGACTGCAAGAT 58.229 40.909 0.00 0.00 33.92 2.40
228 229 3.760684 ACAAGATTTGGGACTGCAAGATC 59.239 43.478 0.00 0.00 33.92 2.75
229 230 2.636830 AGATTTGGGACTGCAAGATCG 58.363 47.619 0.00 0.00 37.43 3.69
230 231 2.237143 AGATTTGGGACTGCAAGATCGA 59.763 45.455 0.00 0.00 37.43 3.59
231 232 2.099141 TTTGGGACTGCAAGATCGAG 57.901 50.000 0.00 0.00 37.43 4.04
232 233 0.250234 TTGGGACTGCAAGATCGAGG 59.750 55.000 0.00 0.00 37.43 4.63
233 234 1.144936 GGGACTGCAAGATCGAGGG 59.855 63.158 0.00 0.00 37.43 4.30
234 235 1.330655 GGGACTGCAAGATCGAGGGA 61.331 60.000 0.00 0.00 37.43 4.20
235 236 0.755686 GGACTGCAAGATCGAGGGAT 59.244 55.000 0.00 0.00 37.43 3.85
236 237 1.139853 GGACTGCAAGATCGAGGGATT 59.860 52.381 0.00 0.00 37.43 3.01
237 238 2.208431 GACTGCAAGATCGAGGGATTG 58.792 52.381 0.00 0.00 37.43 2.67
238 239 1.134280 ACTGCAAGATCGAGGGATTGG 60.134 52.381 0.00 0.00 37.43 3.16
239 240 1.139654 CTGCAAGATCGAGGGATTGGA 59.860 52.381 0.00 0.00 34.07 3.53
240 241 1.559219 TGCAAGATCGAGGGATTGGAA 59.441 47.619 0.00 0.00 31.51 3.53
241 242 1.943340 GCAAGATCGAGGGATTGGAAC 59.057 52.381 0.00 0.00 31.51 3.62
242 243 2.680805 GCAAGATCGAGGGATTGGAACA 60.681 50.000 0.00 0.00 31.51 3.18
260 261 7.337480 TGGAACAATCTCACCAAATATGATG 57.663 36.000 0.00 0.00 31.92 3.07
261 262 7.118060 TGGAACAATCTCACCAAATATGATGA 58.882 34.615 0.00 0.00 31.92 2.92
262 263 7.614974 TGGAACAATCTCACCAAATATGATGAA 59.385 33.333 0.00 0.00 31.92 2.57
263 264 8.469200 GGAACAATCTCACCAAATATGATGAAA 58.531 33.333 0.00 0.00 0.00 2.69
264 265 9.294030 GAACAATCTCACCAAATATGATGAAAC 57.706 33.333 0.00 0.00 0.00 2.78
265 266 7.775120 ACAATCTCACCAAATATGATGAAACC 58.225 34.615 0.00 0.00 0.00 3.27
266 267 6.624352 ATCTCACCAAATATGATGAAACCG 57.376 37.500 0.00 0.00 0.00 4.44
267 268 4.335315 TCTCACCAAATATGATGAAACCGC 59.665 41.667 0.00 0.00 0.00 5.68
268 269 4.013050 TCACCAAATATGATGAAACCGCA 58.987 39.130 0.00 0.00 0.00 5.69
269 270 4.096231 TCACCAAATATGATGAAACCGCAG 59.904 41.667 0.00 0.00 0.00 5.18
270 271 3.181487 ACCAAATATGATGAAACCGCAGC 60.181 43.478 0.00 0.00 0.00 5.25
271 272 3.067180 CCAAATATGATGAAACCGCAGCT 59.933 43.478 0.00 0.00 0.00 4.24
272 273 4.440525 CCAAATATGATGAAACCGCAGCTT 60.441 41.667 0.00 0.00 0.00 3.74
273 274 3.976793 ATATGATGAAACCGCAGCTTG 57.023 42.857 0.00 0.00 0.00 4.01
274 275 1.825090 ATGATGAAACCGCAGCTTGA 58.175 45.000 0.00 0.00 0.00 3.02
275 276 0.874390 TGATGAAACCGCAGCTTGAC 59.126 50.000 0.00 0.00 0.00 3.18
276 277 1.160137 GATGAAACCGCAGCTTGACT 58.840 50.000 0.00 0.00 0.00 3.41
277 278 1.129437 GATGAAACCGCAGCTTGACTC 59.871 52.381 0.00 0.00 0.00 3.36
278 279 0.106708 TGAAACCGCAGCTTGACTCT 59.893 50.000 0.00 0.00 0.00 3.24
279 280 0.793250 GAAACCGCAGCTTGACTCTC 59.207 55.000 0.00 0.00 0.00 3.20
280 281 0.394565 AAACCGCAGCTTGACTCTCT 59.605 50.000 0.00 0.00 0.00 3.10
281 282 0.037790 AACCGCAGCTTGACTCTCTC 60.038 55.000 0.00 0.00 0.00 3.20
282 283 0.897863 ACCGCAGCTTGACTCTCTCT 60.898 55.000 0.00 0.00 0.00 3.10
283 284 0.179140 CCGCAGCTTGACTCTCTCTC 60.179 60.000 0.00 0.00 0.00 3.20
284 285 0.810648 CGCAGCTTGACTCTCTCTCT 59.189 55.000 0.00 0.00 0.00 3.10
285 286 1.202177 CGCAGCTTGACTCTCTCTCTC 60.202 57.143 0.00 0.00 0.00 3.20
286 287 2.094675 GCAGCTTGACTCTCTCTCTCT 58.905 52.381 0.00 0.00 0.00 3.10
717 739 3.966026 CTGAACCGTCGCCGTCTCC 62.966 68.421 0.00 0.00 0.00 3.71
725 747 3.062466 CGCCGTCTCCTCCAGTCA 61.062 66.667 0.00 0.00 0.00 3.41
739 761 2.023598 TCCAGTCATCCTGATCCAGTCT 60.024 50.000 0.00 0.00 44.49 3.24
775 804 0.534427 CGATGGCCTGACTGCATCAT 60.534 55.000 3.32 0.00 36.48 2.45
1113 1155 6.148811 TGAATAAATTCGTGTTGAGGAAGGAC 59.851 38.462 0.00 0.00 39.62 3.85
1353 1534 5.550403 TGAAAAAGGACCTACAAGGGAGTAT 59.450 40.000 0.00 0.00 40.58 2.12
1416 1600 6.445357 TCATATGCGTACTACTCAAGACAA 57.555 37.500 0.00 0.00 0.00 3.18
1617 7506 9.840427 CTCGTTAATCAAAGATGGTTATGTTTT 57.160 29.630 0.00 0.00 32.32 2.43
1668 7557 7.643528 TGATTAACGAGATCACATCATTAGC 57.356 36.000 0.00 0.00 0.00 3.09
1730 7619 4.178540 CACCCGATCGTTTAGTATGTTGT 58.821 43.478 15.09 0.00 0.00 3.32
1866 7755 0.977395 AAGGTGCTCTACAGGTGTCC 59.023 55.000 0.00 0.00 0.00 4.02
2630 8528 3.569004 CCTCTCTTTCCTTCCCCCTCTTA 60.569 52.174 0.00 0.00 0.00 2.10
2699 8598 4.995058 TCCCCCTCCCTTTGGCGT 62.995 66.667 0.00 0.00 0.00 5.68
2743 8644 4.572978 TCCCCCTTGCTCCTTTATATACA 58.427 43.478 0.00 0.00 0.00 2.29
2799 8700 1.405821 CCTCGTGATCGTTCCTTAGCT 59.594 52.381 0.00 0.00 38.33 3.32
3071 8979 0.818296 ACGCTTCTGCTTCGGTCTAT 59.182 50.000 0.00 0.00 36.97 1.98
3359 9268 3.557595 GGTGCTGAGCATATCACTAACAC 59.442 47.826 11.58 0.00 41.91 3.32
3697 9607 2.712057 AATTTCCTGTCTTGCTTGCG 57.288 45.000 0.00 0.00 0.00 4.85
3707 9617 1.606668 TCTTGCTTGCGGTGTTAAAGG 59.393 47.619 0.00 0.00 0.00 3.11
3741 9651 8.677148 TGAAGATAATTAAGGATGCAAGGTAC 57.323 34.615 0.00 0.00 0.00 3.34
3942 9853 6.506147 TGAATCTGTTGGTTTGAATGTTCAG 58.494 36.000 0.00 0.00 38.61 3.02
4078 9989 5.009110 TGTCATAGCCTGAATCTTACTCTCG 59.991 44.000 0.00 0.00 35.07 4.04
4123 10034 7.064966 GCGGTAAAGCTATAACTTTCTTTGGTA 59.935 37.037 4.41 0.00 40.32 3.25
4580 10492 1.665679 GCAATCGACATGGGTGTACAG 59.334 52.381 0.00 0.00 39.09 2.74
4612 10524 2.931325 CTGTAAAGCGGCGTATTACCAA 59.069 45.455 23.92 12.41 0.00 3.67
4731 10643 4.274978 TCTGGTGATGATTGATGTTGCAT 58.725 39.130 0.00 0.00 0.00 3.96
4853 10765 9.846248 AATGATCTAAGAAAATGTTGCACTAAC 57.154 29.630 0.00 0.00 39.80 2.34
4960 10873 1.948834 CCAAACACACTCATGTCAGCA 59.051 47.619 0.00 0.00 36.72 4.41
5036 10949 6.954487 TTGCTTATCGTATCCTCTTGACTA 57.046 37.500 0.00 0.00 0.00 2.59
5037 10950 7.526142 TTGCTTATCGTATCCTCTTGACTAT 57.474 36.000 0.00 0.00 0.00 2.12
5058 10971 0.389296 TACCGGTCACTGTTGCATCG 60.389 55.000 12.40 0.00 0.00 3.84
5124 11037 3.814504 AGGTCAACAATGTCCCAAGAT 57.185 42.857 0.00 0.00 35.60 2.40
5247 11160 6.701145 AAGTCTCGCTTCTCATGATTACTA 57.299 37.500 0.00 0.00 30.06 1.82
5285 11199 8.777413 GCATGCTATTTCTATATTCTTGTGTGA 58.223 33.333 11.37 0.00 0.00 3.58
5435 11353 5.574970 AAATTTCTTTGTTGGGCCCATTA 57.425 34.783 29.23 15.53 0.00 1.90
5449 11367 1.339631 CCCATTAGTGAAGTTCGCCCA 60.340 52.381 12.78 0.31 0.00 5.36
5488 11406 3.535962 CCGGCCCTGCTCTCTCTC 61.536 72.222 0.00 0.00 0.00 3.20
5489 11407 2.441901 CGGCCCTGCTCTCTCTCT 60.442 66.667 0.00 0.00 0.00 3.10
5490 11408 2.489275 CGGCCCTGCTCTCTCTCTC 61.489 68.421 0.00 0.00 0.00 3.20
5491 11409 1.076044 GGCCCTGCTCTCTCTCTCT 60.076 63.158 0.00 0.00 0.00 3.10
5492 11410 1.109323 GGCCCTGCTCTCTCTCTCTC 61.109 65.000 0.00 0.00 0.00 3.20
5493 11411 0.106519 GCCCTGCTCTCTCTCTCTCT 60.107 60.000 0.00 0.00 0.00 3.10
5494 11412 1.972872 CCCTGCTCTCTCTCTCTCTC 58.027 60.000 0.00 0.00 0.00 3.20
5495 11413 1.492176 CCCTGCTCTCTCTCTCTCTCT 59.508 57.143 0.00 0.00 0.00 3.10
5496 11414 2.486191 CCCTGCTCTCTCTCTCTCTCTC 60.486 59.091 0.00 0.00 0.00 3.20
5497 11415 2.437281 CCTGCTCTCTCTCTCTCTCTCT 59.563 54.545 0.00 0.00 0.00 3.10
5498 11416 3.494048 CCTGCTCTCTCTCTCTCTCTCTC 60.494 56.522 0.00 0.00 0.00 3.20
5499 11417 3.378512 TGCTCTCTCTCTCTCTCTCTCT 58.621 50.000 0.00 0.00 0.00 3.10
5500 11418 3.386078 TGCTCTCTCTCTCTCTCTCTCTC 59.614 52.174 0.00 0.00 0.00 3.20
5501 11419 3.640967 GCTCTCTCTCTCTCTCTCTCTCT 59.359 52.174 0.00 0.00 0.00 3.10
5502 11420 4.261994 GCTCTCTCTCTCTCTCTCTCTCTC 60.262 54.167 0.00 0.00 0.00 3.20
5503 11421 5.136068 TCTCTCTCTCTCTCTCTCTCTCT 57.864 47.826 0.00 0.00 0.00 3.10
5504 11422 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
5505 11423 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
5506 11424 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
5507 11425 4.219115 TCTCTCTCTCTCTCTCTCTCTCC 58.781 52.174 0.00 0.00 0.00 3.71
5508 11426 3.309296 TCTCTCTCTCTCTCTCTCTCCC 58.691 54.545 0.00 0.00 0.00 4.30
5509 11427 3.051803 TCTCTCTCTCTCTCTCTCTCCCT 60.052 52.174 0.00 0.00 0.00 4.20
5510 11428 3.309296 TCTCTCTCTCTCTCTCTCCCTC 58.691 54.545 0.00 0.00 0.00 4.30
5511 11429 3.051803 TCTCTCTCTCTCTCTCTCCCTCT 60.052 52.174 0.00 0.00 0.00 3.69
5512 11430 3.309296 TCTCTCTCTCTCTCTCCCTCTC 58.691 54.545 0.00 0.00 0.00 3.20
5513 11431 3.051803 TCTCTCTCTCTCTCTCCCTCTCT 60.052 52.174 0.00 0.00 0.00 3.10
5514 11432 3.309296 TCTCTCTCTCTCTCCCTCTCTC 58.691 54.545 0.00 0.00 0.00 3.20
5515 11433 3.051803 TCTCTCTCTCTCTCCCTCTCTCT 60.052 52.174 0.00 0.00 0.00 3.10
5516 11434 3.309296 TCTCTCTCTCTCCCTCTCTCTC 58.691 54.545 0.00 0.00 0.00 3.20
5517 11435 3.051803 TCTCTCTCTCTCCCTCTCTCTCT 60.052 52.174 0.00 0.00 0.00 3.10
5518 11436 3.713764 CTCTCTCTCTCCCTCTCTCTCTT 59.286 52.174 0.00 0.00 0.00 2.85
5519 11437 3.711704 TCTCTCTCTCCCTCTCTCTCTTC 59.288 52.174 0.00 0.00 0.00 2.87
5520 11438 3.713764 CTCTCTCTCCCTCTCTCTCTTCT 59.286 52.174 0.00 0.00 0.00 2.85
5521 11439 4.890988 TCTCTCTCCCTCTCTCTCTTCTA 58.109 47.826 0.00 0.00 0.00 2.10
5522 11440 4.654262 TCTCTCTCCCTCTCTCTCTTCTAC 59.346 50.000 0.00 0.00 0.00 2.59
5523 11441 4.367166 TCTCTCCCTCTCTCTCTTCTACA 58.633 47.826 0.00 0.00 0.00 2.74
5524 11442 4.785914 TCTCTCCCTCTCTCTCTTCTACAA 59.214 45.833 0.00 0.00 0.00 2.41
5525 11443 4.850680 TCTCCCTCTCTCTCTTCTACAAC 58.149 47.826 0.00 0.00 0.00 3.32
5526 11444 3.611970 TCCCTCTCTCTCTTCTACAACG 58.388 50.000 0.00 0.00 0.00 4.10
5527 11445 3.263681 TCCCTCTCTCTCTTCTACAACGA 59.736 47.826 0.00 0.00 0.00 3.85
5528 11446 4.011023 CCCTCTCTCTCTTCTACAACGAA 58.989 47.826 0.00 0.00 0.00 3.85
5529 11447 4.095782 CCCTCTCTCTCTTCTACAACGAAG 59.904 50.000 0.00 0.00 41.32 3.79
5530 11448 4.095782 CCTCTCTCTCTTCTACAACGAAGG 59.904 50.000 0.00 0.00 40.56 3.46
5531 11449 4.653868 TCTCTCTCTTCTACAACGAAGGT 58.346 43.478 0.00 0.00 40.56 3.50
5532 11450 5.071370 TCTCTCTCTTCTACAACGAAGGTT 58.929 41.667 0.00 0.00 40.56 3.50
5549 11467 7.095024 CGAAGGTTGATATTATCTTCGTCAC 57.905 40.000 18.64 0.00 46.44 3.67
5550 11468 6.918569 CGAAGGTTGATATTATCTTCGTCACT 59.081 38.462 18.64 0.00 46.44 3.41
5551 11469 7.113684 CGAAGGTTGATATTATCTTCGTCACTC 59.886 40.741 18.64 2.38 46.44 3.51
5552 11470 6.750148 AGGTTGATATTATCTTCGTCACTCC 58.250 40.000 5.33 0.00 0.00 3.85
5553 11471 6.551601 AGGTTGATATTATCTTCGTCACTCCT 59.448 38.462 5.33 0.00 0.00 3.69
5554 11472 6.642950 GGTTGATATTATCTTCGTCACTCCTG 59.357 42.308 5.33 0.00 0.00 3.86
5555 11473 6.332735 TGATATTATCTTCGTCACTCCTGG 57.667 41.667 5.33 0.00 0.00 4.45
5556 11474 5.833667 TGATATTATCTTCGTCACTCCTGGT 59.166 40.000 5.33 0.00 0.00 4.00
5557 11475 3.868757 TTATCTTCGTCACTCCTGGTG 57.131 47.619 0.00 0.00 46.60 4.17
5558 11476 0.898320 ATCTTCGTCACTCCTGGTGG 59.102 55.000 0.33 0.00 45.38 4.61
5559 11477 0.469331 TCTTCGTCACTCCTGGTGGT 60.469 55.000 0.33 0.00 45.38 4.16
5560 11478 0.319900 CTTCGTCACTCCTGGTGGTG 60.320 60.000 13.41 13.41 45.38 4.17
5561 11479 1.754380 TTCGTCACTCCTGGTGGTGG 61.754 60.000 17.29 7.27 45.38 4.61
5562 11480 2.032681 GTCACTCCTGGTGGTGGC 59.967 66.667 17.29 13.95 45.38 5.01
5563 11481 3.249189 TCACTCCTGGTGGTGGCC 61.249 66.667 17.29 0.00 45.38 5.36
5564 11482 4.704833 CACTCCTGGTGGTGGCCG 62.705 72.222 0.00 0.00 41.90 6.13
5575 11493 4.864334 GTGGCCGCTGGATGGGAG 62.864 72.222 9.68 0.00 0.00 4.30
5579 11497 2.445845 CCGCTGGATGGGAGGGTA 60.446 66.667 0.00 0.00 0.00 3.69
5580 11498 2.511452 CCGCTGGATGGGAGGGTAG 61.511 68.421 0.00 0.00 0.00 3.18
5581 11499 1.457643 CGCTGGATGGGAGGGTAGA 60.458 63.158 0.00 0.00 0.00 2.59
5582 11500 1.048724 CGCTGGATGGGAGGGTAGAA 61.049 60.000 0.00 0.00 0.00 2.10
5583 11501 0.470341 GCTGGATGGGAGGGTAGAAC 59.530 60.000 0.00 0.00 0.00 3.01
5584 11502 1.879575 CTGGATGGGAGGGTAGAACA 58.120 55.000 0.00 0.00 0.00 3.18
5585 11503 2.412591 CTGGATGGGAGGGTAGAACAT 58.587 52.381 0.00 0.00 0.00 2.71
5586 11504 2.370189 CTGGATGGGAGGGTAGAACATC 59.630 54.545 0.00 0.00 37.73 3.06
5588 11506 2.408565 GATGGGAGGGTAGAACATCCA 58.591 52.381 0.02 0.00 33.60 3.41
5589 11507 1.580059 TGGGAGGGTAGAACATCCAC 58.420 55.000 0.02 0.00 33.24 4.02
5590 11508 0.837940 GGGAGGGTAGAACATCCACC 59.162 60.000 0.02 0.00 33.24 4.61
5591 11509 1.625508 GGGAGGGTAGAACATCCACCT 60.626 57.143 0.02 0.00 33.24 4.00
5592 11510 2.197465 GGAGGGTAGAACATCCACCTT 58.803 52.381 0.00 0.00 32.66 3.50
5593 11511 2.170817 GGAGGGTAGAACATCCACCTTC 59.829 54.545 0.00 0.00 37.63 3.46
5594 11512 2.170817 GAGGGTAGAACATCCACCTTCC 59.829 54.545 0.00 0.00 33.52 3.46
5595 11513 1.212195 GGGTAGAACATCCACCTTCCC 59.788 57.143 0.00 0.00 31.81 3.97
5596 11514 2.197465 GGTAGAACATCCACCTTCCCT 58.803 52.381 0.00 0.00 0.00 4.20
5597 11515 2.170817 GGTAGAACATCCACCTTCCCTC 59.829 54.545 0.00 0.00 0.00 4.30
5598 11516 2.044793 AGAACATCCACCTTCCCTCA 57.955 50.000 0.00 0.00 0.00 3.86
5599 11517 2.566746 AGAACATCCACCTTCCCTCAT 58.433 47.619 0.00 0.00 0.00 2.90
5600 11518 2.240667 AGAACATCCACCTTCCCTCATG 59.759 50.000 0.00 0.00 0.00 3.07
5601 11519 1.673767 ACATCCACCTTCCCTCATGT 58.326 50.000 0.00 0.00 0.00 3.21
5602 11520 1.283029 ACATCCACCTTCCCTCATGTG 59.717 52.381 0.00 0.00 0.00 3.21
5603 11521 0.257039 ATCCACCTTCCCTCATGTGC 59.743 55.000 0.00 0.00 0.00 4.57
5604 11522 1.133181 TCCACCTTCCCTCATGTGCA 61.133 55.000 0.00 0.00 0.00 4.57
5605 11523 0.251297 CCACCTTCCCTCATGTGCAA 60.251 55.000 0.00 0.00 0.00 4.08
5606 11524 1.619654 CACCTTCCCTCATGTGCAAA 58.380 50.000 0.00 0.00 0.00 3.68
5607 11525 1.270550 CACCTTCCCTCATGTGCAAAC 59.729 52.381 0.00 0.00 0.00 2.93
5608 11526 1.145738 ACCTTCCCTCATGTGCAAACT 59.854 47.619 0.00 0.00 0.00 2.66
5609 11527 1.815003 CCTTCCCTCATGTGCAAACTC 59.185 52.381 0.00 0.00 0.00 3.01
5610 11528 2.553904 CCTTCCCTCATGTGCAAACTCT 60.554 50.000 0.00 0.00 0.00 3.24
5611 11529 3.307691 CCTTCCCTCATGTGCAAACTCTA 60.308 47.826 0.00 0.00 0.00 2.43
5612 11530 4.326826 CTTCCCTCATGTGCAAACTCTAA 58.673 43.478 0.00 0.00 0.00 2.10
5613 11531 4.365514 TCCCTCATGTGCAAACTCTAAA 57.634 40.909 0.00 0.00 0.00 1.85
5614 11532 4.724399 TCCCTCATGTGCAAACTCTAAAA 58.276 39.130 0.00 0.00 0.00 1.52
5615 11533 5.324409 TCCCTCATGTGCAAACTCTAAAAT 58.676 37.500 0.00 0.00 0.00 1.82
5616 11534 5.183713 TCCCTCATGTGCAAACTCTAAAATG 59.816 40.000 0.00 0.00 0.00 2.32
5617 11535 5.183713 CCCTCATGTGCAAACTCTAAAATGA 59.816 40.000 0.00 0.00 0.00 2.57
5618 11536 6.088824 CCTCATGTGCAAACTCTAAAATGAC 58.911 40.000 0.00 0.00 0.00 3.06
5619 11537 6.012658 TCATGTGCAAACTCTAAAATGACC 57.987 37.500 0.00 0.00 0.00 4.02
5620 11538 5.769662 TCATGTGCAAACTCTAAAATGACCT 59.230 36.000 0.00 0.00 0.00 3.85
5621 11539 6.265196 TCATGTGCAAACTCTAAAATGACCTT 59.735 34.615 0.00 0.00 0.00 3.50
5622 11540 7.446931 TCATGTGCAAACTCTAAAATGACCTTA 59.553 33.333 0.00 0.00 0.00 2.69
5623 11541 7.202016 TGTGCAAACTCTAAAATGACCTTAG 57.798 36.000 0.00 0.00 0.00 2.18
5624 11542 6.206634 TGTGCAAACTCTAAAATGACCTTAGG 59.793 38.462 0.00 0.00 0.00 2.69
5625 11543 6.206829 GTGCAAACTCTAAAATGACCTTAGGT 59.793 38.462 2.34 2.34 39.44 3.08
5654 11572 3.883489 CCTAATGGGTAGTAGGCTTTTGC 59.117 47.826 0.00 0.00 37.77 3.68
5667 11585 2.076100 GCTTTTGCATACCTTTTGGGC 58.924 47.619 0.00 0.00 46.58 5.36
5668 11586 2.289631 GCTTTTGCATACCTTTTGGGCT 60.290 45.455 0.00 0.00 46.58 5.19
5669 11587 3.328505 CTTTTGCATACCTTTTGGGCTG 58.671 45.455 0.00 0.00 46.08 4.85
5670 11588 0.607620 TTGCATACCTTTTGGGCTGC 59.392 50.000 0.00 0.00 45.51 5.25
5671 11589 1.257055 TGCATACCTTTTGGGCTGCC 61.257 55.000 11.05 11.05 45.03 4.85
5672 11590 0.972471 GCATACCTTTTGGGCTGCCT 60.972 55.000 19.68 0.00 46.08 4.75
5673 11591 1.684869 GCATACCTTTTGGGCTGCCTA 60.685 52.381 19.68 10.28 46.08 3.93
5674 11592 2.733956 CATACCTTTTGGGCTGCCTAA 58.266 47.619 19.68 16.80 46.08 2.69
5675 11593 2.982339 TACCTTTTGGGCTGCCTAAA 57.018 45.000 24.06 24.06 46.08 1.85
5676 11594 2.095604 ACCTTTTGGGCTGCCTAAAA 57.904 45.000 32.05 32.05 46.08 1.52
5677 11595 2.403561 ACCTTTTGGGCTGCCTAAAAA 58.596 42.857 33.02 27.38 41.93 1.94
5678 11596 2.368548 ACCTTTTGGGCTGCCTAAAAAG 59.631 45.455 33.02 32.08 41.93 2.27
5679 11597 2.416747 CTTTTGGGCTGCCTAAAAAGC 58.583 47.619 33.02 12.16 41.93 3.51
5680 11598 1.715785 TTTGGGCTGCCTAAAAAGCT 58.284 45.000 25.36 0.00 39.46 3.74
5681 11599 1.715785 TTGGGCTGCCTAAAAAGCTT 58.284 45.000 19.68 0.00 39.46 3.74
5682 11600 1.256812 TGGGCTGCCTAAAAAGCTTC 58.743 50.000 19.68 0.00 39.46 3.86
5683 11601 1.256812 GGGCTGCCTAAAAAGCTTCA 58.743 50.000 19.68 0.00 39.46 3.02
5684 11602 1.618343 GGGCTGCCTAAAAAGCTTCAA 59.382 47.619 19.68 0.00 39.46 2.69
5685 11603 2.037121 GGGCTGCCTAAAAAGCTTCAAA 59.963 45.455 19.68 0.00 39.46 2.69
5686 11604 3.306989 GGGCTGCCTAAAAAGCTTCAAAT 60.307 43.478 19.68 0.00 39.46 2.32
5687 11605 3.681417 GGCTGCCTAAAAAGCTTCAAATG 59.319 43.478 12.43 0.00 39.46 2.32
5688 11606 4.559153 GCTGCCTAAAAAGCTTCAAATGA 58.441 39.130 0.00 0.00 36.47 2.57
5689 11607 4.386954 GCTGCCTAAAAAGCTTCAAATGAC 59.613 41.667 0.00 0.00 36.47 3.06
5690 11608 5.776744 CTGCCTAAAAAGCTTCAAATGACT 58.223 37.500 0.00 0.00 0.00 3.41
5691 11609 6.570378 GCTGCCTAAAAAGCTTCAAATGACTA 60.570 38.462 0.00 0.00 36.47 2.59
5692 11610 7.466746 TGCCTAAAAAGCTTCAAATGACTAT 57.533 32.000 0.00 0.00 0.00 2.12
5693 11611 7.538575 TGCCTAAAAAGCTTCAAATGACTATC 58.461 34.615 0.00 0.00 0.00 2.08
5694 11612 7.394359 TGCCTAAAAAGCTTCAAATGACTATCT 59.606 33.333 0.00 0.00 0.00 1.98
5695 11613 7.912773 GCCTAAAAAGCTTCAAATGACTATCTC 59.087 37.037 0.00 0.00 0.00 2.75
5696 11614 9.171877 CCTAAAAAGCTTCAAATGACTATCTCT 57.828 33.333 0.00 0.00 0.00 3.10
5699 11617 8.627208 AAAAGCTTCAAATGACTATCTCTTCA 57.373 30.769 0.00 0.00 0.00 3.02
5700 11618 8.804912 AAAGCTTCAAATGACTATCTCTTCAT 57.195 30.769 0.00 0.00 33.74 2.57
5701 11619 9.896645 AAAGCTTCAAATGACTATCTCTTCATA 57.103 29.630 0.00 0.00 31.99 2.15
5702 11620 9.545105 AAGCTTCAAATGACTATCTCTTCATAG 57.455 33.333 0.00 0.00 31.99 2.23
5703 11621 7.656948 AGCTTCAAATGACTATCTCTTCATAGC 59.343 37.037 0.00 0.00 33.25 2.97
5704 11622 7.095271 GCTTCAAATGACTATCTCTTCATAGCC 60.095 40.741 0.00 0.00 31.99 3.93
5708 11626 6.737720 ATGACTATCTCTTCATAGCCAACA 57.262 37.500 0.00 0.00 30.41 3.33
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 5.317808 TGTTATTGAAATTCCGGGTTGAGA 58.682 37.500 0.00 0.00 0.00 3.27
5 6 5.637006 TGTTATTGAAATTCCGGGTTGAG 57.363 39.130 0.00 0.00 0.00 3.02
6 7 6.209589 TGATTGTTATTGAAATTCCGGGTTGA 59.790 34.615 0.00 0.00 0.00 3.18
7 8 6.393990 TGATTGTTATTGAAATTCCGGGTTG 58.606 36.000 0.00 0.00 0.00 3.77
8 9 6.597832 TGATTGTTATTGAAATTCCGGGTT 57.402 33.333 0.00 0.00 0.00 4.11
9 10 6.379703 TGATGATTGTTATTGAAATTCCGGGT 59.620 34.615 0.00 0.00 0.00 5.28
10 11 6.804677 TGATGATTGTTATTGAAATTCCGGG 58.195 36.000 0.00 0.00 0.00 5.73
11 12 7.758980 TGTTGATGATTGTTATTGAAATTCCGG 59.241 33.333 0.00 0.00 0.00 5.14
12 13 8.586273 GTGTTGATGATTGTTATTGAAATTCCG 58.414 33.333 0.00 0.00 0.00 4.30
13 14 9.421806 TGTGTTGATGATTGTTATTGAAATTCC 57.578 29.630 0.00 0.00 0.00 3.01
16 17 9.373603 CCATGTGTTGATGATTGTTATTGAAAT 57.626 29.630 0.00 0.00 0.00 2.17
17 18 8.583296 TCCATGTGTTGATGATTGTTATTGAAA 58.417 29.630 0.00 0.00 0.00 2.69
18 19 8.028354 GTCCATGTGTTGATGATTGTTATTGAA 58.972 33.333 0.00 0.00 0.00 2.69
19 20 7.176340 TGTCCATGTGTTGATGATTGTTATTGA 59.824 33.333 0.00 0.00 0.00 2.57
20 21 7.274033 GTGTCCATGTGTTGATGATTGTTATTG 59.726 37.037 0.00 0.00 0.00 1.90
21 22 7.315142 GTGTCCATGTGTTGATGATTGTTATT 58.685 34.615 0.00 0.00 0.00 1.40
22 23 6.127647 GGTGTCCATGTGTTGATGATTGTTAT 60.128 38.462 0.00 0.00 0.00 1.89
23 24 5.182950 GGTGTCCATGTGTTGATGATTGTTA 59.817 40.000 0.00 0.00 0.00 2.41
24 25 4.022068 GGTGTCCATGTGTTGATGATTGTT 60.022 41.667 0.00 0.00 0.00 2.83
25 26 3.507233 GGTGTCCATGTGTTGATGATTGT 59.493 43.478 0.00 0.00 0.00 2.71
26 27 3.506844 TGGTGTCCATGTGTTGATGATTG 59.493 43.478 0.00 0.00 0.00 2.67
27 28 3.760151 CTGGTGTCCATGTGTTGATGATT 59.240 43.478 0.00 0.00 30.82 2.57
28 29 3.009363 TCTGGTGTCCATGTGTTGATGAT 59.991 43.478 0.00 0.00 30.82 2.45
29 30 2.371510 TCTGGTGTCCATGTGTTGATGA 59.628 45.455 0.00 0.00 30.82 2.92
30 31 2.781923 TCTGGTGTCCATGTGTTGATG 58.218 47.619 0.00 0.00 30.82 3.07
31 32 3.726557 ATCTGGTGTCCATGTGTTGAT 57.273 42.857 0.00 0.00 30.82 2.57
32 33 3.507162 AATCTGGTGTCCATGTGTTGA 57.493 42.857 0.00 0.00 30.82 3.18
33 34 4.589216 AAAATCTGGTGTCCATGTGTTG 57.411 40.909 0.00 0.00 30.82 3.33
34 35 5.136828 TGTAAAATCTGGTGTCCATGTGTT 58.863 37.500 0.00 0.00 30.82 3.32
35 36 4.724399 TGTAAAATCTGGTGTCCATGTGT 58.276 39.130 0.00 0.00 30.82 3.72
36 37 5.902613 ATGTAAAATCTGGTGTCCATGTG 57.097 39.130 0.00 0.00 30.82 3.21
37 38 8.415950 TTTTATGTAAAATCTGGTGTCCATGT 57.584 30.769 0.00 0.00 29.40 3.21
81 82 3.723772 GCTTTGGCCCATGGTTTTT 57.276 47.368 11.73 0.00 0.00 1.94
92 93 1.657751 GAGGATTCGGTGGCTTTGGC 61.658 60.000 0.00 0.00 37.82 4.52
93 94 0.035056 AGAGGATTCGGTGGCTTTGG 60.035 55.000 0.00 0.00 0.00 3.28
94 95 1.740025 GAAGAGGATTCGGTGGCTTTG 59.260 52.381 0.00 0.00 0.00 2.77
95 96 1.340114 GGAAGAGGATTCGGTGGCTTT 60.340 52.381 0.00 0.00 0.00 3.51
96 97 0.253327 GGAAGAGGATTCGGTGGCTT 59.747 55.000 0.00 0.00 0.00 4.35
97 98 0.618968 AGGAAGAGGATTCGGTGGCT 60.619 55.000 0.00 0.00 0.00 4.75
98 99 0.179070 GAGGAAGAGGATTCGGTGGC 60.179 60.000 0.00 0.00 0.00 5.01
99 100 1.195115 TGAGGAAGAGGATTCGGTGG 58.805 55.000 0.00 0.00 0.00 4.61
100 101 3.550437 ATTGAGGAAGAGGATTCGGTG 57.450 47.619 0.00 0.00 0.00 4.94
101 102 5.896073 ATAATTGAGGAAGAGGATTCGGT 57.104 39.130 0.00 0.00 0.00 4.69
102 103 8.725148 CATTTATAATTGAGGAAGAGGATTCGG 58.275 37.037 1.83 0.00 0.00 4.30
103 104 9.277783 ACATTTATAATTGAGGAAGAGGATTCG 57.722 33.333 13.01 0.00 0.00 3.34
105 106 9.927081 ACACATTTATAATTGAGGAAGAGGATT 57.073 29.630 13.01 0.00 0.00 3.01
106 107 9.347240 CACACATTTATAATTGAGGAAGAGGAT 57.653 33.333 13.01 0.00 0.00 3.24
107 108 8.548025 TCACACATTTATAATTGAGGAAGAGGA 58.452 33.333 13.01 0.00 0.00 3.71
108 109 8.737168 TCACACATTTATAATTGAGGAAGAGG 57.263 34.615 13.01 0.00 0.00 3.69
137 138 9.543783 CTAGTGTTACCTAAAGAAGAACTTGTT 57.456 33.333 0.00 0.00 38.98 2.83
138 139 8.921205 TCTAGTGTTACCTAAAGAAGAACTTGT 58.079 33.333 0.00 0.00 38.98 3.16
139 140 9.413048 CTCTAGTGTTACCTAAAGAAGAACTTG 57.587 37.037 0.00 0.00 38.98 3.16
140 141 8.586744 CCTCTAGTGTTACCTAAAGAAGAACTT 58.413 37.037 0.00 0.00 40.98 2.66
141 142 7.309928 GCCTCTAGTGTTACCTAAAGAAGAACT 60.310 40.741 0.00 0.00 0.00 3.01
142 143 6.812656 GCCTCTAGTGTTACCTAAAGAAGAAC 59.187 42.308 0.00 0.00 0.00 3.01
143 144 6.724905 AGCCTCTAGTGTTACCTAAAGAAGAA 59.275 38.462 0.00 0.00 0.00 2.52
144 145 6.254522 AGCCTCTAGTGTTACCTAAAGAAGA 58.745 40.000 0.00 0.00 0.00 2.87
145 146 6.378848 AGAGCCTCTAGTGTTACCTAAAGAAG 59.621 42.308 0.00 0.00 0.00 2.85
146 147 6.254522 AGAGCCTCTAGTGTTACCTAAAGAA 58.745 40.000 0.00 0.00 0.00 2.52
147 148 5.828871 AGAGCCTCTAGTGTTACCTAAAGA 58.171 41.667 0.00 0.00 0.00 2.52
148 149 5.652891 TGAGAGCCTCTAGTGTTACCTAAAG 59.347 44.000 0.00 0.00 0.00 1.85
149 150 5.418209 GTGAGAGCCTCTAGTGTTACCTAAA 59.582 44.000 0.00 0.00 0.00 1.85
150 151 4.948621 GTGAGAGCCTCTAGTGTTACCTAA 59.051 45.833 0.00 0.00 0.00 2.69
151 152 4.018688 TGTGAGAGCCTCTAGTGTTACCTA 60.019 45.833 0.00 0.00 0.00 3.08
152 153 3.245300 TGTGAGAGCCTCTAGTGTTACCT 60.245 47.826 0.00 0.00 0.00 3.08
153 154 3.090037 TGTGAGAGCCTCTAGTGTTACC 58.910 50.000 0.00 0.00 0.00 2.85
154 155 3.506455 TGTGTGAGAGCCTCTAGTGTTAC 59.494 47.826 0.00 0.00 0.00 2.50
155 156 3.763057 TGTGTGAGAGCCTCTAGTGTTA 58.237 45.455 0.00 0.00 0.00 2.41
156 157 2.598565 TGTGTGAGAGCCTCTAGTGTT 58.401 47.619 0.00 0.00 0.00 3.32
157 158 2.294449 TGTGTGAGAGCCTCTAGTGT 57.706 50.000 0.00 0.00 0.00 3.55
158 159 2.757314 TGATGTGTGAGAGCCTCTAGTG 59.243 50.000 0.00 0.00 0.00 2.74
159 160 3.093057 TGATGTGTGAGAGCCTCTAGT 57.907 47.619 0.00 0.00 0.00 2.57
160 161 3.698539 TCTTGATGTGTGAGAGCCTCTAG 59.301 47.826 0.00 0.00 0.00 2.43
161 162 3.701664 TCTTGATGTGTGAGAGCCTCTA 58.298 45.455 0.00 0.00 0.00 2.43
162 163 2.533916 TCTTGATGTGTGAGAGCCTCT 58.466 47.619 0.00 0.00 0.00 3.69
163 164 3.540314 ATCTTGATGTGTGAGAGCCTC 57.460 47.619 0.00 0.00 0.00 4.70
164 165 3.996921 AATCTTGATGTGTGAGAGCCT 57.003 42.857 0.00 0.00 0.00 4.58
165 166 4.260170 AGAAATCTTGATGTGTGAGAGCC 58.740 43.478 0.00 0.00 0.00 4.70
166 167 5.871524 TGTAGAAATCTTGATGTGTGAGAGC 59.128 40.000 0.00 0.00 0.00 4.09
167 168 7.763071 TGATGTAGAAATCTTGATGTGTGAGAG 59.237 37.037 0.00 0.00 0.00 3.20
168 169 7.614494 TGATGTAGAAATCTTGATGTGTGAGA 58.386 34.615 0.00 0.00 0.00 3.27
169 170 7.838771 TGATGTAGAAATCTTGATGTGTGAG 57.161 36.000 0.00 0.00 0.00 3.51
170 171 8.042515 TCATGATGTAGAAATCTTGATGTGTGA 58.957 33.333 0.00 0.00 36.40 3.58
171 172 8.205131 TCATGATGTAGAAATCTTGATGTGTG 57.795 34.615 0.00 0.00 36.40 3.82
172 173 8.797350 TTCATGATGTAGAAATCTTGATGTGT 57.203 30.769 0.00 0.00 39.26 3.72
191 192 8.739039 CCCAAATCTTGTTGTTACTATTCATGA 58.261 33.333 0.00 0.00 0.00 3.07
192 193 8.739039 TCCCAAATCTTGTTGTTACTATTCATG 58.261 33.333 0.00 0.00 0.00 3.07
193 194 8.739972 GTCCCAAATCTTGTTGTTACTATTCAT 58.260 33.333 0.00 0.00 0.00 2.57
194 195 7.942341 AGTCCCAAATCTTGTTGTTACTATTCA 59.058 33.333 0.00 0.00 0.00 2.57
195 196 8.237267 CAGTCCCAAATCTTGTTGTTACTATTC 58.763 37.037 0.00 0.00 0.00 1.75
196 197 7.309194 GCAGTCCCAAATCTTGTTGTTACTATT 60.309 37.037 0.00 0.00 0.00 1.73
197 198 6.151144 GCAGTCCCAAATCTTGTTGTTACTAT 59.849 38.462 0.00 0.00 0.00 2.12
198 199 5.472137 GCAGTCCCAAATCTTGTTGTTACTA 59.528 40.000 0.00 0.00 0.00 1.82
199 200 4.278419 GCAGTCCCAAATCTTGTTGTTACT 59.722 41.667 0.00 0.00 0.00 2.24
200 201 4.037446 TGCAGTCCCAAATCTTGTTGTTAC 59.963 41.667 0.00 0.00 0.00 2.50
201 202 4.211125 TGCAGTCCCAAATCTTGTTGTTA 58.789 39.130 0.00 0.00 0.00 2.41
202 203 3.030291 TGCAGTCCCAAATCTTGTTGTT 58.970 40.909 0.00 0.00 0.00 2.83
203 204 2.665165 TGCAGTCCCAAATCTTGTTGT 58.335 42.857 0.00 0.00 0.00 3.32
204 205 3.318839 TCTTGCAGTCCCAAATCTTGTTG 59.681 43.478 0.00 0.00 0.00 3.33
205 206 3.565307 TCTTGCAGTCCCAAATCTTGTT 58.435 40.909 0.00 0.00 0.00 2.83
206 207 3.228188 TCTTGCAGTCCCAAATCTTGT 57.772 42.857 0.00 0.00 0.00 3.16
207 208 3.181503 CGATCTTGCAGTCCCAAATCTTG 60.182 47.826 0.00 0.00 0.00 3.02
208 209 3.012518 CGATCTTGCAGTCCCAAATCTT 58.987 45.455 0.00 0.00 0.00 2.40
209 210 2.237143 TCGATCTTGCAGTCCCAAATCT 59.763 45.455 0.00 0.00 0.00 2.40
210 211 2.611292 CTCGATCTTGCAGTCCCAAATC 59.389 50.000 0.00 0.00 0.00 2.17
211 212 2.636830 CTCGATCTTGCAGTCCCAAAT 58.363 47.619 0.00 0.00 0.00 2.32
212 213 1.339055 CCTCGATCTTGCAGTCCCAAA 60.339 52.381 0.00 0.00 0.00 3.28
213 214 0.250234 CCTCGATCTTGCAGTCCCAA 59.750 55.000 0.00 0.00 0.00 4.12
214 215 1.617018 CCCTCGATCTTGCAGTCCCA 61.617 60.000 0.00 0.00 0.00 4.37
215 216 1.144936 CCCTCGATCTTGCAGTCCC 59.855 63.158 0.00 0.00 0.00 4.46
216 217 0.755686 ATCCCTCGATCTTGCAGTCC 59.244 55.000 0.00 0.00 0.00 3.85
217 218 2.208431 CAATCCCTCGATCTTGCAGTC 58.792 52.381 0.00 0.00 0.00 3.51
218 219 1.134280 CCAATCCCTCGATCTTGCAGT 60.134 52.381 0.00 0.00 0.00 4.40
219 220 1.139654 TCCAATCCCTCGATCTTGCAG 59.860 52.381 0.00 0.00 0.00 4.41
220 221 1.203237 TCCAATCCCTCGATCTTGCA 58.797 50.000 0.00 0.00 0.00 4.08
221 222 1.943340 GTTCCAATCCCTCGATCTTGC 59.057 52.381 0.00 0.00 0.00 4.01
222 223 3.266510 TGTTCCAATCCCTCGATCTTG 57.733 47.619 0.00 0.00 0.00 3.02
223 224 4.164988 AGATTGTTCCAATCCCTCGATCTT 59.835 41.667 12.13 0.00 0.00 2.40
224 225 3.713764 AGATTGTTCCAATCCCTCGATCT 59.286 43.478 12.13 0.00 0.00 2.75
225 226 4.061596 GAGATTGTTCCAATCCCTCGATC 58.938 47.826 12.13 1.06 0.00 3.69
226 227 3.455910 TGAGATTGTTCCAATCCCTCGAT 59.544 43.478 12.13 0.00 0.00 3.59
227 228 2.837591 TGAGATTGTTCCAATCCCTCGA 59.162 45.455 12.13 0.00 0.00 4.04
228 229 2.939103 GTGAGATTGTTCCAATCCCTCG 59.061 50.000 12.13 0.00 0.00 4.63
229 230 3.282885 GGTGAGATTGTTCCAATCCCTC 58.717 50.000 12.13 6.37 0.00 4.30
230 231 2.649312 TGGTGAGATTGTTCCAATCCCT 59.351 45.455 12.13 0.00 0.00 4.20
231 232 3.085952 TGGTGAGATTGTTCCAATCCC 57.914 47.619 12.13 8.07 0.00 3.85
232 233 5.665916 ATTTGGTGAGATTGTTCCAATCC 57.334 39.130 12.13 6.09 39.27 3.01
233 234 7.999679 TCATATTTGGTGAGATTGTTCCAATC 58.000 34.615 8.55 8.55 39.27 2.67
234 235 7.959658 TCATATTTGGTGAGATTGTTCCAAT 57.040 32.000 0.00 0.00 39.27 3.16
235 236 7.614974 TCATCATATTTGGTGAGATTGTTCCAA 59.385 33.333 0.00 0.00 38.07 3.53
236 237 7.118060 TCATCATATTTGGTGAGATTGTTCCA 58.882 34.615 0.00 0.00 38.07 3.53
237 238 7.572523 TCATCATATTTGGTGAGATTGTTCC 57.427 36.000 0.00 0.00 38.07 3.62
238 239 9.294030 GTTTCATCATATTTGGTGAGATTGTTC 57.706 33.333 0.00 0.00 43.69 3.18
239 240 8.253113 GGTTTCATCATATTTGGTGAGATTGTT 58.747 33.333 0.00 0.00 43.69 2.83
240 241 7.415541 CGGTTTCATCATATTTGGTGAGATTGT 60.416 37.037 0.00 0.00 43.69 2.71
241 242 6.914215 CGGTTTCATCATATTTGGTGAGATTG 59.086 38.462 0.00 0.00 43.69 2.67
242 243 6.460123 GCGGTTTCATCATATTTGGTGAGATT 60.460 38.462 0.00 0.00 43.69 2.40
243 244 5.009010 GCGGTTTCATCATATTTGGTGAGAT 59.991 40.000 0.00 0.00 43.69 2.75
244 245 4.335315 GCGGTTTCATCATATTTGGTGAGA 59.665 41.667 0.00 0.00 43.69 3.27
245 246 4.096231 TGCGGTTTCATCATATTTGGTGAG 59.904 41.667 0.00 0.00 43.69 3.51
246 247 4.013050 TGCGGTTTCATCATATTTGGTGA 58.987 39.130 0.00 0.00 41.26 4.02
247 248 4.353737 CTGCGGTTTCATCATATTTGGTG 58.646 43.478 0.00 0.00 35.12 4.17
248 249 3.181487 GCTGCGGTTTCATCATATTTGGT 60.181 43.478 0.00 0.00 0.00 3.67
249 250 3.067180 AGCTGCGGTTTCATCATATTTGG 59.933 43.478 0.00 0.00 0.00 3.28
250 251 4.297299 AGCTGCGGTTTCATCATATTTG 57.703 40.909 0.00 0.00 0.00 2.32
251 252 4.398988 TCAAGCTGCGGTTTCATCATATTT 59.601 37.500 0.00 0.00 0.00 1.40
252 253 3.947196 TCAAGCTGCGGTTTCATCATATT 59.053 39.130 0.00 0.00 0.00 1.28
253 254 3.313526 GTCAAGCTGCGGTTTCATCATAT 59.686 43.478 0.00 0.00 0.00 1.78
254 255 2.677836 GTCAAGCTGCGGTTTCATCATA 59.322 45.455 0.00 0.00 0.00 2.15
255 256 1.470098 GTCAAGCTGCGGTTTCATCAT 59.530 47.619 0.00 0.00 0.00 2.45
256 257 0.874390 GTCAAGCTGCGGTTTCATCA 59.126 50.000 0.00 0.00 0.00 3.07
257 258 1.129437 GAGTCAAGCTGCGGTTTCATC 59.871 52.381 0.00 0.00 0.00 2.92
258 259 1.160137 GAGTCAAGCTGCGGTTTCAT 58.840 50.000 0.00 0.00 0.00 2.57
259 260 0.106708 AGAGTCAAGCTGCGGTTTCA 59.893 50.000 0.00 0.00 0.00 2.69
260 261 0.793250 GAGAGTCAAGCTGCGGTTTC 59.207 55.000 0.00 0.00 0.00 2.78
261 262 0.394565 AGAGAGTCAAGCTGCGGTTT 59.605 50.000 0.00 0.00 0.00 3.27
262 263 0.037790 GAGAGAGTCAAGCTGCGGTT 60.038 55.000 0.00 0.00 0.00 4.44
263 264 0.897863 AGAGAGAGTCAAGCTGCGGT 60.898 55.000 0.00 0.00 0.00 5.68
264 265 0.179140 GAGAGAGAGTCAAGCTGCGG 60.179 60.000 0.00 0.00 0.00 5.69
265 266 0.810648 AGAGAGAGAGTCAAGCTGCG 59.189 55.000 0.00 0.00 0.00 5.18
266 267 2.094675 AGAGAGAGAGAGTCAAGCTGC 58.905 52.381 0.00 0.00 0.00 5.25
528 529 7.228906 CGTACATACTCTATACCAGATATGGGG 59.771 44.444 11.86 0.00 33.52 4.96
593 601 3.849951 GGCTAGCTGTGCGCCCTA 61.850 66.667 15.72 0.00 40.39 3.53
739 761 2.686106 GGCCGGTTAGGGACTCCA 60.686 66.667 1.90 0.00 41.75 3.86
775 804 4.788075 TGATCAGGGAACTAGGGATTTCAA 59.212 41.667 0.00 0.00 40.21 2.69
1040 1078 8.192774 TCAACTTCTCTACTCGTTTCTTGTTAA 58.807 33.333 0.00 0.00 0.00 2.01
1113 1155 2.526077 TGCGTAGAATTCGTAGCAGTG 58.474 47.619 16.69 0.00 0.00 3.66
1353 1534 7.638444 TCTTATCCATGGGAAACACAAGATTA 58.362 34.615 13.02 0.00 34.34 1.75
1401 1585 7.760340 CCATTCCTTAGTTGTCTTGAGTAGTAC 59.240 40.741 0.00 0.00 0.00 2.73
1416 1600 4.657814 TTTCCTTCAGCCATTCCTTAGT 57.342 40.909 0.00 0.00 0.00 2.24
1558 1742 5.375283 AGAGGCATACTAGTGACACTCTA 57.625 43.478 12.39 3.40 32.75 2.43
1668 7557 5.238868 GGGTCATGTCAATCAGATCATTCAG 59.761 44.000 0.00 0.00 0.00 3.02
1996 7885 1.001378 GTAATGCATCATCCCGCAACC 60.001 52.381 0.00 0.00 42.37 3.77
2073 7962 3.195661 GTTACTTGCCCGAGATTCGATT 58.804 45.455 0.00 0.00 43.74 3.34
2260 8149 3.904571 ACTGTCATCGTAACGTTAAGCA 58.095 40.909 15.31 7.53 0.00 3.91
2414 8303 1.877443 CGAAATCACCCGGAACACTTT 59.123 47.619 0.73 0.00 0.00 2.66
2756 8657 2.775384 TCAACTTGTGTGTCCTAGGGTT 59.225 45.455 9.46 0.00 0.00 4.11
3016 8923 3.006247 GGAAGTAGTCGTACGTCTTCCT 58.994 50.000 30.94 21.69 42.95 3.36
3059 8966 2.029623 GTACCCTCATAGACCGAAGCA 58.970 52.381 0.00 0.00 0.00 3.91
3071 8979 2.816087 GAGTGTTGTCTACGTACCCTCA 59.184 50.000 0.00 0.00 0.00 3.86
3187 9095 3.537795 AGAGTACACTAACCACCTCCA 57.462 47.619 0.00 0.00 0.00 3.86
3359 9268 5.671493 ACCTTACCTCATTCCAAGTATTCG 58.329 41.667 0.00 0.00 0.00 3.34
3548 9458 3.653164 ACTCCCAAAAAGTTCCCATTGT 58.347 40.909 0.00 0.00 0.00 2.71
3685 9595 1.669604 TTAACACCGCAAGCAAGACA 58.330 45.000 0.00 0.00 0.00 3.41
3697 9607 6.289064 TCTTCAAGAGAGAACCTTTAACACC 58.711 40.000 0.00 0.00 0.00 4.16
3741 9651 6.814146 GGGTACAGTCTAAAATGACAGAGAAG 59.186 42.308 0.00 0.00 39.27 2.85
3942 9853 0.036306 ACCCTTGTCCACGAACATCC 59.964 55.000 0.00 0.00 0.00 3.51
3994 9905 2.619074 GCAATCTGCTCTGTACCCCTTT 60.619 50.000 0.00 0.00 40.96 3.11
4323 10234 0.109272 CGTCGCTCTTAGTCTTGGCA 60.109 55.000 0.00 0.00 0.00 4.92
4382 10293 0.750546 CCAGATGACCATGCCCAGTG 60.751 60.000 0.00 0.00 0.00 3.66
4514 10426 5.875359 GCTAGTAGCAAAGCCTTCTTTTCTA 59.125 40.000 17.47 0.00 41.89 2.10
4520 10432 3.604582 CAAGCTAGTAGCAAAGCCTTCT 58.395 45.455 23.77 0.00 45.56 2.85
4580 10492 3.733988 GCCGCTTTACAGGAAATAAAGGC 60.734 47.826 6.63 0.85 39.19 4.35
4731 10643 7.450074 TCAAATCTACTAGTCAAGGAAGCAAA 58.550 34.615 0.00 0.00 0.00 3.68
4853 10765 5.163622 ACCATGAGTGAAAGTGTTGACAAAG 60.164 40.000 0.00 0.00 0.00 2.77
4915 10828 6.197842 GCAATGTCATCTGCAATACTTTTAGC 59.802 38.462 12.35 0.00 38.48 3.09
4960 10873 9.323985 GCTCTAACAAACTCAAATATCTGATCT 57.676 33.333 0.00 0.00 0.00 2.75
5036 10949 0.394938 TGCAACAGTGACCGGTACAT 59.605 50.000 7.34 0.00 0.00 2.29
5037 10950 0.394938 ATGCAACAGTGACCGGTACA 59.605 50.000 7.34 4.61 0.00 2.90
5058 10971 4.918810 TTTTGAGAAACTCCTTTCAGCC 57.081 40.909 0.00 0.00 38.67 4.85
5103 11016 3.593442 TCTTGGGACATTGTTGACCTT 57.407 42.857 0.00 0.00 39.30 3.50
5247 11160 3.853355 ATAGCATGCTAGCAAACCTCT 57.147 42.857 29.78 15.48 36.85 3.69
5417 11335 2.896685 CACTAATGGGCCCAACAAAGAA 59.103 45.455 32.58 1.39 0.00 2.52
5418 11336 2.109128 TCACTAATGGGCCCAACAAAGA 59.891 45.455 32.58 21.25 0.00 2.52
5421 11339 2.158385 ACTTCACTAATGGGCCCAACAA 60.158 45.455 32.58 16.38 0.00 2.83
5435 11353 2.750350 CCCTGGGCGAACTTCACT 59.250 61.111 0.00 0.00 0.00 3.41
5449 11367 0.034089 CAAGGATTTCGAAGGCCCCT 60.034 55.000 12.99 8.70 0.00 4.79
5482 11400 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
5483 11401 5.136068 AGAGAGAGAGAGAGAGAGAGAGA 57.864 47.826 0.00 0.00 0.00 3.10
5484 11402 4.280677 GGAGAGAGAGAGAGAGAGAGAGAG 59.719 54.167 0.00 0.00 0.00 3.20
5485 11403 4.219115 GGAGAGAGAGAGAGAGAGAGAGA 58.781 52.174 0.00 0.00 0.00 3.10
5486 11404 3.323403 GGGAGAGAGAGAGAGAGAGAGAG 59.677 56.522 0.00 0.00 0.00 3.20
5487 11405 3.051803 AGGGAGAGAGAGAGAGAGAGAGA 60.052 52.174 0.00 0.00 0.00 3.10
5488 11406 3.312890 AGGGAGAGAGAGAGAGAGAGAG 58.687 54.545 0.00 0.00 0.00 3.20
5489 11407 3.051803 AGAGGGAGAGAGAGAGAGAGAGA 60.052 52.174 0.00 0.00 0.00 3.10
5490 11408 3.312890 AGAGGGAGAGAGAGAGAGAGAG 58.687 54.545 0.00 0.00 0.00 3.20
5491 11409 3.051803 AGAGAGGGAGAGAGAGAGAGAGA 60.052 52.174 0.00 0.00 0.00 3.10
5492 11410 3.312890 AGAGAGGGAGAGAGAGAGAGAG 58.687 54.545 0.00 0.00 0.00 3.20
5493 11411 3.051803 AGAGAGAGGGAGAGAGAGAGAGA 60.052 52.174 0.00 0.00 0.00 3.10
5494 11412 3.312890 AGAGAGAGGGAGAGAGAGAGAG 58.687 54.545 0.00 0.00 0.00 3.20
5495 11413 3.051803 AGAGAGAGAGGGAGAGAGAGAGA 60.052 52.174 0.00 0.00 0.00 3.10
5496 11414 3.312890 AGAGAGAGAGGGAGAGAGAGAG 58.687 54.545 0.00 0.00 0.00 3.20
5497 11415 3.421394 AGAGAGAGAGGGAGAGAGAGA 57.579 52.381 0.00 0.00 0.00 3.10
5498 11416 3.713764 AGAAGAGAGAGAGGGAGAGAGAG 59.286 52.174 0.00 0.00 0.00 3.20
5499 11417 3.736094 AGAAGAGAGAGAGGGAGAGAGA 58.264 50.000 0.00 0.00 0.00 3.10
5500 11418 4.408921 TGTAGAAGAGAGAGAGGGAGAGAG 59.591 50.000 0.00 0.00 0.00 3.20
5501 11419 4.367166 TGTAGAAGAGAGAGAGGGAGAGA 58.633 47.826 0.00 0.00 0.00 3.10
5502 11420 4.771114 TGTAGAAGAGAGAGAGGGAGAG 57.229 50.000 0.00 0.00 0.00 3.20
5503 11421 4.624364 CGTTGTAGAAGAGAGAGAGGGAGA 60.624 50.000 0.00 0.00 0.00 3.71
5504 11422 3.625764 CGTTGTAGAAGAGAGAGAGGGAG 59.374 52.174 0.00 0.00 0.00 4.30
5505 11423 3.263681 TCGTTGTAGAAGAGAGAGAGGGA 59.736 47.826 0.00 0.00 0.00 4.20
5506 11424 3.611970 TCGTTGTAGAAGAGAGAGAGGG 58.388 50.000 0.00 0.00 0.00 4.30
5526 11444 7.382759 GGAGTGACGAAGATAATATCAACCTTC 59.617 40.741 2.84 0.00 0.00 3.46
5527 11445 7.070074 AGGAGTGACGAAGATAATATCAACCTT 59.930 37.037 2.84 0.00 29.73 3.50
5528 11446 6.551601 AGGAGTGACGAAGATAATATCAACCT 59.448 38.462 2.84 0.00 0.00 3.50
5529 11447 6.642950 CAGGAGTGACGAAGATAATATCAACC 59.357 42.308 2.84 0.00 0.00 3.77
5530 11448 6.642950 CCAGGAGTGACGAAGATAATATCAAC 59.357 42.308 2.84 0.00 0.00 3.18
5531 11449 6.323996 ACCAGGAGTGACGAAGATAATATCAA 59.676 38.462 2.84 0.00 0.00 2.57
5532 11450 5.833667 ACCAGGAGTGACGAAGATAATATCA 59.166 40.000 2.84 0.00 0.00 2.15
5533 11451 6.334102 ACCAGGAGTGACGAAGATAATATC 57.666 41.667 0.00 0.00 0.00 1.63
5547 11465 4.704833 CGGCCACCACCAGGAGTG 62.705 72.222 2.24 0.00 46.83 3.51
5558 11476 4.864334 CTCCCATCCAGCGGCCAC 62.864 72.222 2.24 0.00 0.00 5.01
5562 11480 2.445845 TACCCTCCCATCCAGCGG 60.446 66.667 0.00 0.00 0.00 5.52
5563 11481 1.048724 TTCTACCCTCCCATCCAGCG 61.049 60.000 0.00 0.00 0.00 5.18
5564 11482 0.470341 GTTCTACCCTCCCATCCAGC 59.530 60.000 0.00 0.00 0.00 4.85
5565 11483 1.879575 TGTTCTACCCTCCCATCCAG 58.120 55.000 0.00 0.00 0.00 3.86
5566 11484 2.408565 GATGTTCTACCCTCCCATCCA 58.591 52.381 0.00 0.00 0.00 3.41
5567 11485 1.700186 GGATGTTCTACCCTCCCATCC 59.300 57.143 0.00 0.00 43.30 3.51
5568 11486 2.104963 GTGGATGTTCTACCCTCCCATC 59.895 54.545 0.00 0.00 32.95 3.51
5569 11487 2.127708 GTGGATGTTCTACCCTCCCAT 58.872 52.381 0.00 0.00 0.00 4.00
5570 11488 1.580059 GTGGATGTTCTACCCTCCCA 58.420 55.000 0.00 0.00 0.00 4.37
5571 11489 0.837940 GGTGGATGTTCTACCCTCCC 59.162 60.000 0.00 0.00 41.60 4.30
5577 11495 2.838202 TGAGGGAAGGTGGATGTTCTAC 59.162 50.000 0.00 0.00 0.00 2.59
5578 11496 3.199442 TGAGGGAAGGTGGATGTTCTA 57.801 47.619 0.00 0.00 0.00 2.10
5579 11497 2.044793 TGAGGGAAGGTGGATGTTCT 57.955 50.000 0.00 0.00 0.00 3.01
5580 11498 2.025887 ACATGAGGGAAGGTGGATGTTC 60.026 50.000 0.00 0.00 0.00 3.18
5581 11499 1.995542 ACATGAGGGAAGGTGGATGTT 59.004 47.619 0.00 0.00 0.00 2.71
5582 11500 1.283029 CACATGAGGGAAGGTGGATGT 59.717 52.381 0.00 0.00 0.00 3.06
5583 11501 2.020694 GCACATGAGGGAAGGTGGATG 61.021 57.143 0.00 0.00 0.00 3.51
5584 11502 0.257039 GCACATGAGGGAAGGTGGAT 59.743 55.000 0.00 0.00 0.00 3.41
5585 11503 1.133181 TGCACATGAGGGAAGGTGGA 61.133 55.000 0.00 0.00 0.00 4.02
5586 11504 0.251297 TTGCACATGAGGGAAGGTGG 60.251 55.000 0.00 0.00 0.00 4.61
5587 11505 1.270550 GTTTGCACATGAGGGAAGGTG 59.729 52.381 0.00 0.00 0.00 4.00
5588 11506 1.145738 AGTTTGCACATGAGGGAAGGT 59.854 47.619 0.00 0.00 0.00 3.50
5589 11507 1.815003 GAGTTTGCACATGAGGGAAGG 59.185 52.381 0.00 0.00 0.00 3.46
5590 11508 2.787994 AGAGTTTGCACATGAGGGAAG 58.212 47.619 0.00 0.00 0.00 3.46
5591 11509 2.957402 AGAGTTTGCACATGAGGGAA 57.043 45.000 0.00 0.00 0.00 3.97
5592 11510 4.365514 TTTAGAGTTTGCACATGAGGGA 57.634 40.909 0.00 0.00 0.00 4.20
5593 11511 5.183713 TCATTTTAGAGTTTGCACATGAGGG 59.816 40.000 0.00 0.00 0.00 4.30
5594 11512 6.088824 GTCATTTTAGAGTTTGCACATGAGG 58.911 40.000 0.00 0.00 0.00 3.86
5595 11513 6.072286 AGGTCATTTTAGAGTTTGCACATGAG 60.072 38.462 0.00 0.00 0.00 2.90
5596 11514 5.769662 AGGTCATTTTAGAGTTTGCACATGA 59.230 36.000 0.00 0.00 0.00 3.07
5597 11515 6.017400 AGGTCATTTTAGAGTTTGCACATG 57.983 37.500 0.00 0.00 0.00 3.21
5598 11516 6.655078 AAGGTCATTTTAGAGTTTGCACAT 57.345 33.333 0.00 0.00 0.00 3.21
5599 11517 6.206634 CCTAAGGTCATTTTAGAGTTTGCACA 59.793 38.462 0.00 0.00 31.26 4.57
5600 11518 6.206829 ACCTAAGGTCATTTTAGAGTTTGCAC 59.793 38.462 0.00 0.00 31.26 4.57
5601 11519 6.303839 ACCTAAGGTCATTTTAGAGTTTGCA 58.696 36.000 0.00 0.00 31.26 4.08
5602 11520 6.819397 ACCTAAGGTCATTTTAGAGTTTGC 57.181 37.500 0.00 0.00 31.26 3.68
5632 11550 3.883489 GCAAAAGCCTACTACCCATTAGG 59.117 47.826 0.00 0.00 43.78 2.69
5633 11551 4.523083 TGCAAAAGCCTACTACCCATTAG 58.477 43.478 0.00 0.00 0.00 1.73
5634 11552 4.577988 TGCAAAAGCCTACTACCCATTA 57.422 40.909 0.00 0.00 0.00 1.90
5635 11553 3.449746 TGCAAAAGCCTACTACCCATT 57.550 42.857 0.00 0.00 0.00 3.16
5636 11554 3.669939 ATGCAAAAGCCTACTACCCAT 57.330 42.857 0.00 0.00 0.00 4.00
5637 11555 3.371166 GGTATGCAAAAGCCTACTACCCA 60.371 47.826 0.00 0.00 0.00 4.51
5638 11556 3.118000 AGGTATGCAAAAGCCTACTACCC 60.118 47.826 0.00 0.00 0.00 3.69
5639 11557 4.152284 AGGTATGCAAAAGCCTACTACC 57.848 45.455 0.00 0.00 0.00 3.18
5640 11558 6.322491 CAAAAGGTATGCAAAAGCCTACTAC 58.678 40.000 0.00 0.00 0.00 2.73
5641 11559 5.417580 CCAAAAGGTATGCAAAAGCCTACTA 59.582 40.000 0.00 0.00 0.00 1.82
5642 11560 4.220602 CCAAAAGGTATGCAAAAGCCTACT 59.779 41.667 0.00 0.00 0.00 2.57
5643 11561 4.494484 CCAAAAGGTATGCAAAAGCCTAC 58.506 43.478 0.00 0.00 0.00 3.18
5644 11562 3.513515 CCCAAAAGGTATGCAAAAGCCTA 59.486 43.478 0.00 0.00 0.00 3.93
5645 11563 2.302733 CCCAAAAGGTATGCAAAAGCCT 59.697 45.455 0.00 0.00 0.00 4.58
5646 11564 2.698803 CCCAAAAGGTATGCAAAAGCC 58.301 47.619 0.00 0.00 0.00 4.35
5647 11565 2.076100 GCCCAAAAGGTATGCAAAAGC 58.924 47.619 0.00 0.00 38.26 3.51
5648 11566 3.328505 CAGCCCAAAAGGTATGCAAAAG 58.671 45.455 0.00 0.00 38.26 2.27
5649 11567 2.549778 GCAGCCCAAAAGGTATGCAAAA 60.550 45.455 0.00 0.00 45.05 2.44
5650 11568 1.001860 GCAGCCCAAAAGGTATGCAAA 59.998 47.619 0.00 0.00 45.05 3.68
5651 11569 0.607620 GCAGCCCAAAAGGTATGCAA 59.392 50.000 0.00 0.00 45.05 4.08
5652 11570 1.257055 GGCAGCCCAAAAGGTATGCA 61.257 55.000 0.00 0.00 46.56 3.96
5653 11571 0.972471 AGGCAGCCCAAAAGGTATGC 60.972 55.000 8.22 0.00 45.00 3.14
5654 11572 2.435372 TAGGCAGCCCAAAAGGTATG 57.565 50.000 8.22 0.00 38.26 2.39
5655 11573 3.466395 TTTAGGCAGCCCAAAAGGTAT 57.534 42.857 8.22 0.00 38.26 2.73
5656 11574 2.982339 TTTAGGCAGCCCAAAAGGTA 57.018 45.000 8.22 0.00 38.26 3.08
5657 11575 2.095604 TTTTAGGCAGCCCAAAAGGT 57.904 45.000 13.23 0.00 38.26 3.50
5658 11576 2.871637 GCTTTTTAGGCAGCCCAAAAGG 60.872 50.000 30.69 25.66 36.03 3.11
5659 11577 2.037641 AGCTTTTTAGGCAGCCCAAAAG 59.962 45.455 28.13 28.13 37.36 2.27
5660 11578 2.046292 AGCTTTTTAGGCAGCCCAAAA 58.954 42.857 13.23 13.23 36.62 2.44
5661 11579 1.715785 AGCTTTTTAGGCAGCCCAAA 58.284 45.000 8.22 3.86 36.62 3.28
5662 11580 1.618343 GAAGCTTTTTAGGCAGCCCAA 59.382 47.619 8.22 0.00 36.62 4.12
5663 11581 1.256812 GAAGCTTTTTAGGCAGCCCA 58.743 50.000 8.22 0.00 36.62 5.36
5664 11582 1.256812 TGAAGCTTTTTAGGCAGCCC 58.743 50.000 8.22 0.00 36.62 5.19
5665 11583 3.385193 TTTGAAGCTTTTTAGGCAGCC 57.615 42.857 1.84 1.84 36.62 4.85
5666 11584 4.386954 GTCATTTGAAGCTTTTTAGGCAGC 59.613 41.667 0.00 0.00 36.16 5.25
5667 11585 5.776744 AGTCATTTGAAGCTTTTTAGGCAG 58.223 37.500 0.00 0.00 0.00 4.85
5668 11586 5.789643 AGTCATTTGAAGCTTTTTAGGCA 57.210 34.783 0.00 0.00 0.00 4.75
5669 11587 7.766283 AGATAGTCATTTGAAGCTTTTTAGGC 58.234 34.615 0.00 0.00 0.00 3.93
5670 11588 9.171877 AGAGATAGTCATTTGAAGCTTTTTAGG 57.828 33.333 0.00 0.00 0.00 2.69
5673 11591 9.071276 TGAAGAGATAGTCATTTGAAGCTTTTT 57.929 29.630 0.00 0.00 0.00 1.94
5674 11592 8.627208 TGAAGAGATAGTCATTTGAAGCTTTT 57.373 30.769 0.00 0.00 0.00 2.27
5675 11593 8.804912 ATGAAGAGATAGTCATTTGAAGCTTT 57.195 30.769 0.00 0.00 0.00 3.51
5676 11594 9.545105 CTATGAAGAGATAGTCATTTGAAGCTT 57.455 33.333 0.00 0.00 0.00 3.74
5677 11595 7.656948 GCTATGAAGAGATAGTCATTTGAAGCT 59.343 37.037 0.00 0.00 0.00 3.74
5678 11596 7.095271 GGCTATGAAGAGATAGTCATTTGAAGC 60.095 40.741 0.00 0.00 31.82 3.86
5679 11597 7.930325 TGGCTATGAAGAGATAGTCATTTGAAG 59.070 37.037 0.00 0.00 35.96 3.02
5680 11598 7.795047 TGGCTATGAAGAGATAGTCATTTGAA 58.205 34.615 0.00 0.00 35.96 2.69
5681 11599 7.365497 TGGCTATGAAGAGATAGTCATTTGA 57.635 36.000 0.00 0.00 35.96 2.69
5682 11600 7.496920 TGTTGGCTATGAAGAGATAGTCATTTG 59.503 37.037 0.00 0.00 39.65 2.32
5683 11601 7.568349 TGTTGGCTATGAAGAGATAGTCATTT 58.432 34.615 0.00 0.00 39.65 2.32
5684 11602 7.129457 TGTTGGCTATGAAGAGATAGTCATT 57.871 36.000 0.00 0.00 39.65 2.57
5685 11603 6.737720 TGTTGGCTATGAAGAGATAGTCAT 57.262 37.500 0.00 0.00 39.65 3.06
5686 11604 6.098838 ACATGTTGGCTATGAAGAGATAGTCA 59.901 38.462 0.00 0.00 38.49 3.41
5687 11605 6.423302 CACATGTTGGCTATGAAGAGATAGTC 59.577 42.308 0.00 0.00 32.10 2.59
5688 11606 6.098838 TCACATGTTGGCTATGAAGAGATAGT 59.901 38.462 0.00 0.00 0.00 2.12
5689 11607 6.423302 GTCACATGTTGGCTATGAAGAGATAG 59.577 42.308 0.00 0.00 0.00 2.08
5690 11608 6.283694 GTCACATGTTGGCTATGAAGAGATA 58.716 40.000 0.00 0.00 0.00 1.98
5691 11609 5.121811 GTCACATGTTGGCTATGAAGAGAT 58.878 41.667 0.00 0.00 0.00 2.75
5692 11610 4.507710 GTCACATGTTGGCTATGAAGAGA 58.492 43.478 0.00 0.00 0.00 3.10
5693 11611 3.308053 CGTCACATGTTGGCTATGAAGAG 59.692 47.826 0.00 0.00 0.00 2.85
5694 11612 3.261580 CGTCACATGTTGGCTATGAAGA 58.738 45.455 0.00 0.00 0.00 2.87
5695 11613 2.223112 GCGTCACATGTTGGCTATGAAG 60.223 50.000 0.00 0.00 0.00 3.02
5696 11614 1.737236 GCGTCACATGTTGGCTATGAA 59.263 47.619 0.00 0.00 0.00 2.57
5697 11615 1.368641 GCGTCACATGTTGGCTATGA 58.631 50.000 0.00 0.00 0.00 2.15
5698 11616 0.378257 GGCGTCACATGTTGGCTATG 59.622 55.000 0.00 0.00 0.00 2.23
5699 11617 0.748005 GGGCGTCACATGTTGGCTAT 60.748 55.000 13.52 0.00 0.00 2.97
5700 11618 1.376683 GGGCGTCACATGTTGGCTA 60.377 57.895 13.52 0.00 0.00 3.93
5701 11619 2.672996 GGGCGTCACATGTTGGCT 60.673 61.111 13.52 0.00 0.00 4.75
5702 11620 3.747976 GGGGCGTCACATGTTGGC 61.748 66.667 0.00 1.14 0.00 4.52
5703 11621 3.061848 GGGGGCGTCACATGTTGG 61.062 66.667 0.00 0.00 0.00 3.77
5704 11622 3.430862 CGGGGGCGTCACATGTTG 61.431 66.667 0.00 0.00 0.00 3.33
5708 11626 2.189521 GAATCGGGGGCGTCACAT 59.810 61.111 0.00 0.00 0.00 3.21


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.