Multiple sequence alignment - TraesCS2A01G546400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G546400 chr2A 100.000 2096 0 0 2197 4292 755175923 755173828 0.000000e+00 3871.0
1 TraesCS2A01G546400 chr2A 100.000 1949 0 0 1 1949 755178119 755176171 0.000000e+00 3600.0
2 TraesCS2A01G546400 chr2A 91.600 1738 92 21 2315 4042 755337149 755338842 0.000000e+00 2351.0
3 TraesCS2A01G546400 chr2A 94.050 958 55 2 589 1544 755335680 755336637 0.000000e+00 1452.0
4 TraesCS2A01G546400 chr2A 89.978 928 88 3 599 1524 748078205 748079129 0.000000e+00 1194.0
5 TraesCS2A01G546400 chr2A 88.319 916 102 3 610 1524 748088602 748089513 0.000000e+00 1094.0
6 TraesCS2A01G546400 chr2A 81.536 1094 167 27 2328 3393 755087282 755088368 0.000000e+00 869.0
7 TraesCS2A01G546400 chr2A 80.122 1152 183 34 2301 3425 748079909 748081041 0.000000e+00 817.0
8 TraesCS2A01G546400 chr2A 86.145 166 21 2 1645 1810 523457889 523457726 1.230000e-40 178.0
9 TraesCS2A01G546400 chr2B 91.746 1999 128 20 2301 4292 765592362 765590394 0.000000e+00 2743.0
10 TraesCS2A01G546400 chr2B 90.273 1172 76 20 389 1547 765595022 765593876 0.000000e+00 1498.0
11 TraesCS2A01G546400 chr2B 89.336 919 91 5 610 1525 753829991 753829077 0.000000e+00 1147.0
12 TraesCS2A01G546400 chr2B 88.717 904 95 3 610 1511 753748002 753748900 0.000000e+00 1098.0
13 TraesCS2A01G546400 chr2B 88.197 915 100 4 598 1511 765572192 765573099 0.000000e+00 1085.0
14 TraesCS2A01G546400 chr2B 85.882 170 19 2 1645 1810 361634598 361634766 4.410000e-40 176.0
15 TraesCS2A01G546400 chr2B 96.970 99 3 0 1851 1949 765593687 765593589 2.650000e-37 167.0
16 TraesCS2A01G546400 chr2B 90.741 108 8 2 1544 1650 765593790 765593684 4.470000e-30 143.0
17 TraesCS2A01G546400 chr2D 93.745 1279 76 2 2301 3575 623956874 623955596 0.000000e+00 1916.0
18 TraesCS2A01G546400 chr2D 91.840 1299 60 19 389 1652 623958743 623957456 0.000000e+00 1770.0
19 TraesCS2A01G546400 chr2D 88.372 903 100 3 610 1511 623895270 623896168 0.000000e+00 1081.0
20 TraesCS2A01G546400 chr2D 89.969 648 51 5 3602 4240 623955597 623954955 0.000000e+00 824.0
21 TraesCS2A01G546400 chr2D 85.842 784 98 11 2516 3292 623896425 623897202 0.000000e+00 821.0
22 TraesCS2A01G546400 chr2D 79.492 1180 185 40 2309 3459 617511346 617512497 0.000000e+00 785.0
23 TraesCS2A01G546400 chr2D 98.039 51 1 0 164 214 623958965 623958915 5.910000e-14 89.8
24 TraesCS2A01G546400 chr2D 93.878 49 3 0 1802 1850 575230333 575230285 1.660000e-09 75.0
25 TraesCS2A01G546400 chr7D 91.946 1192 88 6 2893 4080 534442978 534444165 0.000000e+00 1663.0
26 TraesCS2A01G546400 chr7D 83.962 848 118 12 2460 3292 534620884 534620040 0.000000e+00 797.0
27 TraesCS2A01G546400 chr7D 93.056 216 13 2 4078 4292 534444280 534444494 8.960000e-82 315.0
28 TraesCS2A01G546400 chr7D 87.019 208 20 3 1647 1850 51544245 51544449 1.200000e-55 228.0
29 TraesCS2A01G546400 chr7D 86.316 95 8 2 164 253 534440448 534440542 9.820000e-17 99.0
30 TraesCS2A01G546400 chr7A 90.411 146 14 0 1655 1800 602236452 602236597 4.380000e-45 193.0
31 TraesCS2A01G546400 chr7A 86.228 167 15 6 1650 1810 224300353 224300189 1.590000e-39 174.0
32 TraesCS2A01G546400 chr1A 88.272 162 18 1 1649 1810 525024587 525024747 4.380000e-45 193.0
33 TraesCS2A01G546400 chr7B 87.975 158 19 0 1649 1806 134222323 134222480 2.040000e-43 187.0
34 TraesCS2A01G546400 chr6B 85.965 171 16 5 1646 1810 712471079 712471247 4.410000e-40 176.0
35 TraesCS2A01G546400 chr6B 95.918 49 2 0 1802 1850 554659416 554659368 3.560000e-11 80.5
36 TraesCS2A01G546400 chr6A 86.061 165 20 3 1648 1810 504938818 504938981 1.590000e-39 174.0
37 TraesCS2A01G546400 chr6A 93.878 49 3 0 1802 1850 115953233 115953185 1.660000e-09 75.0
38 TraesCS2A01G546400 chr4D 96.000 50 2 0 1801 1850 394371173 394371124 9.890000e-12 82.4
39 TraesCS2A01G546400 chr4D 93.878 49 3 0 1802 1850 285748680 285748632 1.660000e-09 75.0
40 TraesCS2A01G546400 chr4A 95.918 49 2 0 1802 1850 234138097 234138145 3.560000e-11 80.5
41 TraesCS2A01G546400 chr3A 94.000 50 3 0 1801 1850 383083333 383083284 4.600000e-10 76.8
42 TraesCS2A01G546400 chr1B 93.878 49 3 0 1802 1850 415871058 415871010 1.660000e-09 75.0
43 TraesCS2A01G546400 chr5B 93.023 43 3 0 1906 1948 643672285 643672243 3.580000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G546400 chr2A 755173828 755178119 4291 True 3735.500000 3871 100.000000 1 4292 2 chr2A.!!$R2 4291
1 TraesCS2A01G546400 chr2A 755335680 755338842 3162 False 1901.500000 2351 92.825000 589 4042 2 chr2A.!!$F4 3453
2 TraesCS2A01G546400 chr2A 748088602 748089513 911 False 1094.000000 1094 88.319000 610 1524 1 chr2A.!!$F1 914
3 TraesCS2A01G546400 chr2A 748078205 748081041 2836 False 1005.500000 1194 85.050000 599 3425 2 chr2A.!!$F3 2826
4 TraesCS2A01G546400 chr2A 755087282 755088368 1086 False 869.000000 869 81.536000 2328 3393 1 chr2A.!!$F2 1065
5 TraesCS2A01G546400 chr2B 753829077 753829991 914 True 1147.000000 1147 89.336000 610 1525 1 chr2B.!!$R1 915
6 TraesCS2A01G546400 chr2B 765590394 765595022 4628 True 1137.750000 2743 92.432500 389 4292 4 chr2B.!!$R2 3903
7 TraesCS2A01G546400 chr2B 753748002 753748900 898 False 1098.000000 1098 88.717000 610 1511 1 chr2B.!!$F2 901
8 TraesCS2A01G546400 chr2B 765572192 765573099 907 False 1085.000000 1085 88.197000 598 1511 1 chr2B.!!$F3 913
9 TraesCS2A01G546400 chr2D 623954955 623958965 4010 True 1149.950000 1916 93.398250 164 4240 4 chr2D.!!$R2 4076
10 TraesCS2A01G546400 chr2D 623895270 623897202 1932 False 951.000000 1081 87.107000 610 3292 2 chr2D.!!$F2 2682
11 TraesCS2A01G546400 chr2D 617511346 617512497 1151 False 785.000000 785 79.492000 2309 3459 1 chr2D.!!$F1 1150
12 TraesCS2A01G546400 chr7D 534620040 534620884 844 True 797.000000 797 83.962000 2460 3292 1 chr7D.!!$R1 832
13 TraesCS2A01G546400 chr7D 534440448 534444494 4046 False 692.333333 1663 90.439333 164 4292 3 chr7D.!!$F2 4128

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
123 124 0.034616 CCAAAATTTTCCAGCCGCCA 59.965 50.0 0.00 0.00 0.00 5.69 F
144 145 0.179200 CAACGGCGTTGCAGTAATCC 60.179 55.0 35.80 0.00 35.69 3.01 F
1759 2892 0.036732 TTGAAAGACTGAGCCGGCAT 59.963 50.0 31.54 14.28 0.00 4.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1740 2873 0.036732 ATGCCGGCTCAGTCTTTCAA 59.963 50.000 29.70 1.81 0.0 2.69 R
1786 2919 0.179108 GTCCATGACGAGGTGCCTAC 60.179 60.000 0.00 0.00 0.0 3.18 R
3407 5923 4.474113 TCGCTAGAAAGTCGAGTTTTCTC 58.526 43.478 21.64 10.54 42.3 2.87 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 40 5.443185 TTTCTCTATCCCGTACGTTATGG 57.557 43.478 15.21 8.25 34.52 2.74
40 41 4.090761 TCTCTATCCCGTACGTTATGGT 57.909 45.455 15.21 0.00 32.79 3.55
41 42 4.067896 TCTCTATCCCGTACGTTATGGTC 58.932 47.826 15.21 0.00 32.79 4.02
42 43 3.817084 CTCTATCCCGTACGTTATGGTCA 59.183 47.826 15.21 0.33 32.79 4.02
43 44 4.401022 TCTATCCCGTACGTTATGGTCAT 58.599 43.478 15.21 1.62 32.79 3.06
44 45 5.559770 TCTATCCCGTACGTTATGGTCATA 58.440 41.667 15.21 2.67 32.79 2.15
45 46 6.182627 TCTATCCCGTACGTTATGGTCATAT 58.817 40.000 15.21 0.61 32.79 1.78
46 47 7.337938 TCTATCCCGTACGTTATGGTCATATA 58.662 38.462 15.21 1.71 32.79 0.86
47 48 7.994911 TCTATCCCGTACGTTATGGTCATATAT 59.005 37.037 15.21 0.00 32.79 0.86
48 49 6.839124 TCCCGTACGTTATGGTCATATATT 57.161 37.500 15.21 0.00 32.79 1.28
49 50 6.855836 TCCCGTACGTTATGGTCATATATTC 58.144 40.000 15.21 0.00 32.79 1.75
50 51 6.660521 TCCCGTACGTTATGGTCATATATTCT 59.339 38.462 15.21 0.00 32.79 2.40
51 52 7.828717 TCCCGTACGTTATGGTCATATATTCTA 59.171 37.037 15.21 0.00 32.79 2.10
52 53 8.627403 CCCGTACGTTATGGTCATATATTCTAT 58.373 37.037 15.21 0.00 32.79 1.98
62 63 9.965902 ATGGTCATATATTCTATTCCAAAGACC 57.034 33.333 0.00 0.00 40.65 3.85
63 64 8.944138 TGGTCATATATTCTATTCCAAAGACCA 58.056 33.333 0.00 0.00 45.76 4.02
64 65 9.793259 GGTCATATATTCTATTCCAAAGACCAA 57.207 33.333 0.00 0.00 40.15 3.67
72 73 8.477419 TTCTATTCCAAAGACCAAACAATTCT 57.523 30.769 0.00 0.00 0.00 2.40
73 74 8.477419 TCTATTCCAAAGACCAAACAATTCTT 57.523 30.769 0.00 0.00 0.00 2.52
74 75 8.359642 TCTATTCCAAAGACCAAACAATTCTTG 58.640 33.333 0.00 0.00 29.89 3.02
75 76 6.537453 TTCCAAAGACCAAACAATTCTTGA 57.463 33.333 0.00 0.00 29.89 3.02
76 77 6.729690 TCCAAAGACCAAACAATTCTTGAT 57.270 33.333 0.00 0.00 29.89 2.57
77 78 6.748132 TCCAAAGACCAAACAATTCTTGATC 58.252 36.000 0.00 0.00 29.89 2.92
78 79 5.928264 CCAAAGACCAAACAATTCTTGATCC 59.072 40.000 0.00 0.00 29.89 3.36
79 80 6.462768 CCAAAGACCAAACAATTCTTGATCCA 60.463 38.462 0.00 0.00 29.89 3.41
80 81 6.729690 AAGACCAAACAATTCTTGATCCAA 57.270 33.333 0.00 0.00 0.00 3.53
81 82 6.729690 AGACCAAACAATTCTTGATCCAAA 57.270 33.333 0.00 0.00 0.00 3.28
82 83 7.307131 AGACCAAACAATTCTTGATCCAAAT 57.693 32.000 0.00 0.00 0.00 2.32
83 84 7.156673 AGACCAAACAATTCTTGATCCAAATG 58.843 34.615 0.00 0.00 0.00 2.32
84 85 6.829849 ACCAAACAATTCTTGATCCAAATGT 58.170 32.000 0.00 0.00 0.00 2.71
85 86 6.707161 ACCAAACAATTCTTGATCCAAATGTG 59.293 34.615 0.00 0.00 0.00 3.21
86 87 6.930164 CCAAACAATTCTTGATCCAAATGTGA 59.070 34.615 0.00 0.00 0.00 3.58
87 88 7.441760 CCAAACAATTCTTGATCCAAATGTGAA 59.558 33.333 0.00 0.00 0.00 3.18
88 89 7.951530 AACAATTCTTGATCCAAATGTGAAC 57.048 32.000 0.00 0.00 0.00 3.18
89 90 7.294017 ACAATTCTTGATCCAAATGTGAACT 57.706 32.000 0.00 0.00 0.00 3.01
90 91 7.729116 ACAATTCTTGATCCAAATGTGAACTT 58.271 30.769 0.00 0.00 0.00 2.66
91 92 8.206189 ACAATTCTTGATCCAAATGTGAACTTT 58.794 29.630 0.00 0.00 0.00 2.66
92 93 8.492748 CAATTCTTGATCCAAATGTGAACTTTG 58.507 33.333 0.00 0.00 34.17 2.77
93 94 5.531634 TCTTGATCCAAATGTGAACTTTGC 58.468 37.500 0.00 0.00 33.27 3.68
94 95 4.255833 TGATCCAAATGTGAACTTTGCC 57.744 40.909 0.00 0.00 33.27 4.52
95 96 3.640498 TGATCCAAATGTGAACTTTGCCA 59.360 39.130 0.00 0.00 33.27 4.92
96 97 3.451141 TCCAAATGTGAACTTTGCCAC 57.549 42.857 0.00 0.00 33.27 5.01
97 98 2.126467 CCAAATGTGAACTTTGCCACG 58.874 47.619 0.00 0.00 36.15 4.94
98 99 1.522258 CAAATGTGAACTTTGCCACGC 59.478 47.619 0.00 0.00 36.15 5.34
99 100 1.032014 AATGTGAACTTTGCCACGCT 58.968 45.000 0.00 0.00 36.15 5.07
100 101 0.593128 ATGTGAACTTTGCCACGCTC 59.407 50.000 0.00 0.00 36.15 5.03
101 102 1.282875 GTGAACTTTGCCACGCTCC 59.717 57.895 0.00 0.00 0.00 4.70
102 103 1.153066 TGAACTTTGCCACGCTCCA 60.153 52.632 0.00 0.00 0.00 3.86
103 104 1.165907 TGAACTTTGCCACGCTCCAG 61.166 55.000 0.00 0.00 0.00 3.86
104 105 2.463675 GAACTTTGCCACGCTCCAGC 62.464 60.000 0.00 0.00 37.78 4.85
105 106 3.741476 CTTTGCCACGCTCCAGCC 61.741 66.667 0.00 0.00 37.91 4.85
106 107 4.577677 TTTGCCACGCTCCAGCCA 62.578 61.111 0.00 0.00 37.91 4.75
107 108 4.577677 TTGCCACGCTCCAGCCAA 62.578 61.111 0.00 0.00 37.91 4.52
108 109 4.577677 TGCCACGCTCCAGCCAAA 62.578 61.111 0.00 0.00 37.91 3.28
109 110 3.294493 GCCACGCTCCAGCCAAAA 61.294 61.111 0.00 0.00 37.91 2.44
110 111 2.639327 GCCACGCTCCAGCCAAAAT 61.639 57.895 0.00 0.00 37.91 1.82
111 112 1.966762 CCACGCTCCAGCCAAAATT 59.033 52.632 0.00 0.00 37.91 1.82
112 113 0.318120 CCACGCTCCAGCCAAAATTT 59.682 50.000 0.00 0.00 37.91 1.82
113 114 1.270252 CCACGCTCCAGCCAAAATTTT 60.270 47.619 0.00 0.00 37.91 1.82
114 115 2.061028 CACGCTCCAGCCAAAATTTTC 58.939 47.619 0.00 0.00 37.91 2.29
115 116 1.000843 ACGCTCCAGCCAAAATTTTCC 59.999 47.619 0.00 0.00 37.91 3.13
116 117 1.000731 CGCTCCAGCCAAAATTTTCCA 59.999 47.619 0.00 0.00 37.91 3.53
117 118 2.691927 GCTCCAGCCAAAATTTTCCAG 58.308 47.619 0.00 0.00 34.31 3.86
118 119 2.691927 CTCCAGCCAAAATTTTCCAGC 58.308 47.619 0.00 4.84 0.00 4.85
119 120 1.347378 TCCAGCCAAAATTTTCCAGCC 59.653 47.619 0.00 0.00 0.00 4.85
120 121 1.431496 CAGCCAAAATTTTCCAGCCG 58.569 50.000 0.00 0.00 0.00 5.52
121 122 0.320683 AGCCAAAATTTTCCAGCCGC 60.321 50.000 0.00 0.00 0.00 6.53
122 123 1.298157 GCCAAAATTTTCCAGCCGCC 61.298 55.000 0.00 0.00 0.00 6.13
123 124 0.034616 CCAAAATTTTCCAGCCGCCA 59.965 50.000 0.00 0.00 0.00 5.69
124 125 1.431496 CAAAATTTTCCAGCCGCCAG 58.569 50.000 0.00 0.00 0.00 4.85
125 126 0.320683 AAAATTTTCCAGCCGCCAGC 60.321 50.000 0.00 0.00 44.25 4.85
143 144 3.290098 CAACGGCGTTGCAGTAATC 57.710 52.632 35.80 0.00 35.69 1.75
144 145 0.179200 CAACGGCGTTGCAGTAATCC 60.179 55.000 35.80 0.00 35.69 3.01
145 146 0.321298 AACGGCGTTGCAGTAATCCT 60.321 50.000 26.22 0.00 35.69 3.24
146 147 0.533491 ACGGCGTTGCAGTAATCCTA 59.467 50.000 6.77 0.00 34.87 2.94
147 148 1.138266 ACGGCGTTGCAGTAATCCTAT 59.862 47.619 6.77 0.00 34.87 2.57
148 149 1.792949 CGGCGTTGCAGTAATCCTATC 59.207 52.381 0.00 0.00 0.00 2.08
149 150 2.545952 CGGCGTTGCAGTAATCCTATCT 60.546 50.000 0.00 0.00 0.00 1.98
150 151 2.802816 GGCGTTGCAGTAATCCTATCTG 59.197 50.000 0.00 0.00 0.00 2.90
151 152 2.802816 GCGTTGCAGTAATCCTATCTGG 59.197 50.000 0.00 0.00 37.10 3.86
152 153 3.741388 GCGTTGCAGTAATCCTATCTGGT 60.741 47.826 0.00 0.00 37.07 4.00
153 154 3.804325 CGTTGCAGTAATCCTATCTGGTG 59.196 47.826 0.00 0.00 37.07 4.17
154 155 4.130118 GTTGCAGTAATCCTATCTGGTGG 58.870 47.826 0.00 0.00 37.07 4.61
155 156 3.653164 TGCAGTAATCCTATCTGGTGGA 58.347 45.455 0.00 0.00 37.07 4.02
156 157 4.234550 TGCAGTAATCCTATCTGGTGGAT 58.765 43.478 0.00 0.00 44.21 3.41
157 158 4.284490 TGCAGTAATCCTATCTGGTGGATC 59.716 45.833 0.00 0.00 41.76 3.36
158 159 4.284490 GCAGTAATCCTATCTGGTGGATCA 59.716 45.833 0.00 0.00 41.76 2.92
159 160 5.046014 GCAGTAATCCTATCTGGTGGATCAT 60.046 44.000 0.00 0.00 41.76 2.45
160 161 6.638610 CAGTAATCCTATCTGGTGGATCATC 58.361 44.000 0.00 0.00 41.76 2.92
161 162 4.815533 AATCCTATCTGGTGGATCATCG 57.184 45.455 0.00 0.00 41.76 3.84
162 163 3.525800 TCCTATCTGGTGGATCATCGA 57.474 47.619 0.00 0.00 35.98 3.59
208 209 2.459934 CAAACGAAAACAAGGAGGCAC 58.540 47.619 0.00 0.00 0.00 5.01
214 215 2.452600 AAACAAGGAGGCACCAAGAA 57.547 45.000 3.18 0.00 42.04 2.52
219 220 1.439543 AGGAGGCACCAAGAAAGAGT 58.560 50.000 3.18 0.00 42.04 3.24
225 226 4.336280 AGGCACCAAGAAAGAGTAAATCC 58.664 43.478 0.00 0.00 0.00 3.01
227 228 4.767409 GGCACCAAGAAAGAGTAAATCCTT 59.233 41.667 0.00 0.00 0.00 3.36
236 237 6.427242 AGAAAGAGTAAATCCTTTCCGTTGTC 59.573 38.462 0.00 0.00 45.60 3.18
237 238 5.223449 AGAGTAAATCCTTTCCGTTGTCA 57.777 39.130 0.00 0.00 0.00 3.58
247 252 2.831685 TCCGTTGTCATGCTACACTT 57.168 45.000 0.00 0.00 0.00 3.16
250 255 2.805671 CCGTTGTCATGCTACACTTGAA 59.194 45.455 0.00 0.00 34.50 2.69
252 257 4.457810 CGTTGTCATGCTACACTTGAAAG 58.542 43.478 0.00 0.00 34.50 2.62
253 258 4.211164 CGTTGTCATGCTACACTTGAAAGA 59.789 41.667 0.00 0.00 34.50 2.52
254 259 5.277297 CGTTGTCATGCTACACTTGAAAGAA 60.277 40.000 0.00 0.00 34.50 2.52
255 260 6.494842 GTTGTCATGCTACACTTGAAAGAAA 58.505 36.000 0.00 0.00 34.50 2.52
256 261 6.691754 TGTCATGCTACACTTGAAAGAAAA 57.308 33.333 0.00 0.00 34.50 2.29
257 262 7.094508 TGTCATGCTACACTTGAAAGAAAAA 57.905 32.000 0.00 0.00 34.50 1.94
258 263 7.195646 TGTCATGCTACACTTGAAAGAAAAAG 58.804 34.615 0.00 0.00 34.50 2.27
259 264 7.066887 TGTCATGCTACACTTGAAAGAAAAAGA 59.933 33.333 0.00 0.00 34.50 2.52
260 265 7.915397 GTCATGCTACACTTGAAAGAAAAAGAA 59.085 33.333 0.00 0.00 34.50 2.52
261 266 8.465999 TCATGCTACACTTGAAAGAAAAAGAAA 58.534 29.630 0.00 0.00 30.00 2.52
262 267 8.749499 CATGCTACACTTGAAAGAAAAAGAAAG 58.251 33.333 0.00 0.00 0.00 2.62
263 268 7.826690 TGCTACACTTGAAAGAAAAAGAAAGT 58.173 30.769 0.00 0.00 0.00 2.66
264 269 8.952278 TGCTACACTTGAAAGAAAAAGAAAGTA 58.048 29.630 0.00 0.00 0.00 2.24
267 272 8.349568 ACACTTGAAAGAAAAAGAAAGTACCT 57.650 30.769 0.00 0.00 0.00 3.08
269 274 9.076596 CACTTGAAAGAAAAAGAAAGTACCTTG 57.923 33.333 0.00 0.00 0.00 3.61
270 275 8.251026 ACTTGAAAGAAAAAGAAAGTACCTTGG 58.749 33.333 0.00 0.00 0.00 3.61
272 277 8.533569 TGAAAGAAAAAGAAAGTACCTTGGAT 57.466 30.769 0.00 0.00 0.00 3.41
286 291 4.950205 CCTTGGATAAGGTGGTACGTAT 57.050 45.455 0.00 0.00 46.92 3.06
288 293 6.022163 CCTTGGATAAGGTGGTACGTATAG 57.978 45.833 0.00 0.00 46.92 1.31
289 294 5.537674 CCTTGGATAAGGTGGTACGTATAGT 59.462 44.000 0.00 0.00 46.92 2.12
306 368 8.862550 ACGTATAGTATATGTCATGCATGATG 57.137 34.615 30.89 12.52 39.30 3.07
313 375 3.337694 TGTCATGCATGATGTCTGTGA 57.662 42.857 30.89 4.60 39.30 3.58
315 377 3.268330 GTCATGCATGATGTCTGTGACT 58.732 45.455 30.89 0.00 39.30 3.41
316 378 3.309138 GTCATGCATGATGTCTGTGACTC 59.691 47.826 30.89 10.81 39.30 3.36
317 379 3.197116 TCATGCATGATGTCTGTGACTCT 59.803 43.478 25.42 0.00 33.15 3.24
318 380 2.968675 TGCATGATGTCTGTGACTCTG 58.031 47.619 0.00 0.00 33.15 3.35
319 381 2.301009 TGCATGATGTCTGTGACTCTGT 59.699 45.455 0.00 0.00 33.15 3.41
320 382 2.671888 GCATGATGTCTGTGACTCTGTG 59.328 50.000 0.00 0.00 33.15 3.66
326 426 2.499693 TGTCTGTGACTCTGTGGTTCAA 59.500 45.455 0.00 0.00 33.15 2.69
328 428 3.938963 GTCTGTGACTCTGTGGTTCAAAA 59.061 43.478 0.00 0.00 0.00 2.44
355 455 0.984230 CTGCTACTCCCTTGGTTCCA 59.016 55.000 0.00 0.00 0.00 3.53
359 459 3.227614 GCTACTCCCTTGGTTCCAAAAA 58.772 45.455 5.76 0.00 0.00 1.94
382 482 4.868450 TTGTGTCGTGGTTTTAGTTCAG 57.132 40.909 0.00 0.00 0.00 3.02
383 483 4.126208 TGTGTCGTGGTTTTAGTTCAGA 57.874 40.909 0.00 0.00 0.00 3.27
384 484 4.116961 TGTGTCGTGGTTTTAGTTCAGAG 58.883 43.478 0.00 0.00 0.00 3.35
385 485 3.493503 GTGTCGTGGTTTTAGTTCAGAGG 59.506 47.826 0.00 0.00 0.00 3.69
386 486 3.385433 TGTCGTGGTTTTAGTTCAGAGGA 59.615 43.478 0.00 0.00 0.00 3.71
387 487 4.141892 TGTCGTGGTTTTAGTTCAGAGGAA 60.142 41.667 0.00 0.00 0.00 3.36
406 650 3.251004 GGAAGAAGATGTTGTGCTCGTTT 59.749 43.478 0.00 0.00 0.00 3.60
407 651 4.261197 GGAAGAAGATGTTGTGCTCGTTTT 60.261 41.667 0.00 0.00 0.00 2.43
415 659 1.522668 TGTGCTCGTTTTCCATCCTG 58.477 50.000 0.00 0.00 0.00 3.86
443 693 1.544246 GTTAGGCATCACCAACCAACC 59.456 52.381 0.00 0.00 43.14 3.77
444 694 1.072266 TAGGCATCACCAACCAACCT 58.928 50.000 0.00 0.00 43.14 3.50
445 695 0.251341 AGGCATCACCAACCAACCTC 60.251 55.000 0.00 0.00 43.14 3.85
446 696 1.250840 GGCATCACCAACCAACCTCC 61.251 60.000 0.00 0.00 38.86 4.30
447 697 0.251341 GCATCACCAACCAACCTCCT 60.251 55.000 0.00 0.00 0.00 3.69
448 698 1.826385 CATCACCAACCAACCTCCTC 58.174 55.000 0.00 0.00 0.00 3.71
451 701 2.359975 CCAACCAACCTCCTCGCC 60.360 66.667 0.00 0.00 0.00 5.54
452 702 2.359975 CAACCAACCTCCTCGCCC 60.360 66.667 0.00 0.00 0.00 6.13
453 703 2.852075 AACCAACCTCCTCGCCCA 60.852 61.111 0.00 0.00 0.00 5.36
454 704 3.192103 AACCAACCTCCTCGCCCAC 62.192 63.158 0.00 0.00 0.00 4.61
455 705 4.760047 CCAACCTCCTCGCCCACG 62.760 72.222 0.00 0.00 42.01 4.94
510 890 5.907207 TCTAGATTTGGTCTTCATTCCTCG 58.093 41.667 0.00 0.00 38.42 4.63
511 891 3.878778 AGATTTGGTCTTCATTCCTCGG 58.121 45.455 0.00 0.00 31.47 4.63
512 892 3.519510 AGATTTGGTCTTCATTCCTCGGA 59.480 43.478 0.00 0.00 31.47 4.55
514 894 1.938585 TGGTCTTCATTCCTCGGACT 58.061 50.000 0.00 0.00 0.00 3.85
516 896 3.643237 TGGTCTTCATTCCTCGGACTAT 58.357 45.455 0.00 0.00 0.00 2.12
517 897 4.800023 TGGTCTTCATTCCTCGGACTATA 58.200 43.478 0.00 0.00 0.00 1.31
518 898 4.583489 TGGTCTTCATTCCTCGGACTATAC 59.417 45.833 0.00 0.00 0.00 1.47
524 910 5.068636 TCATTCCTCGGACTATACTACCAC 58.931 45.833 0.00 0.00 0.00 4.16
527 913 2.805099 CCTCGGACTATACTACCACGAC 59.195 54.545 0.00 0.00 0.00 4.34
557 949 0.796312 AAATAGCGTTGCGTGACTGG 59.204 50.000 0.00 0.00 0.00 4.00
582 974 3.389221 GCTAGCAGCTTTATCAGAGACC 58.611 50.000 10.63 0.00 38.45 3.85
583 975 3.069443 GCTAGCAGCTTTATCAGAGACCT 59.931 47.826 10.63 0.00 38.45 3.85
584 976 4.279671 GCTAGCAGCTTTATCAGAGACCTA 59.720 45.833 10.63 0.00 38.45 3.08
585 977 4.935352 AGCAGCTTTATCAGAGACCTAG 57.065 45.455 0.00 0.00 0.00 3.02
586 978 3.069443 AGCAGCTTTATCAGAGACCTAGC 59.931 47.826 0.00 0.00 0.00 3.42
587 979 3.181471 GCAGCTTTATCAGAGACCTAGCA 60.181 47.826 0.00 0.00 0.00 3.49
596 1008 0.898320 GAGACCTAGCAGCACAAGGA 59.102 55.000 13.82 0.00 34.34 3.36
652 1066 2.112718 CCTGGCTAGCATGGCTCC 59.887 66.667 18.24 0.00 44.74 4.70
692 1106 2.382305 TCTACCTCCTCAACCTCCTCAA 59.618 50.000 0.00 0.00 0.00 3.02
861 1275 4.680537 ACGGTGGTCGCCTCCTCT 62.681 66.667 12.88 0.00 43.89 3.69
1058 2030 3.083997 GCTCCACCACCTCCGGAT 61.084 66.667 3.57 0.00 0.00 4.18
1389 2363 4.008933 GTGGACCAGAGGCTGCGT 62.009 66.667 0.00 0.00 0.00 5.24
1512 2486 2.132762 CGCTCACTTTTCACGGTAACT 58.867 47.619 0.00 0.00 0.00 2.24
1520 2494 7.411274 TCACTTTTCACGGTAACTACATTTTG 58.589 34.615 0.00 0.00 0.00 2.44
1537 2513 4.458951 TTTTGTGTGTGTGTTTTGCAAC 57.541 36.364 0.00 0.00 0.00 4.17
1650 2783 9.574516 ACATCACCTAGAAAAGTTTACAGATTT 57.425 29.630 0.00 0.00 0.00 2.17
1669 2802 8.902806 ACAGATTTTTCTTTGAACATCAGTACA 58.097 29.630 0.00 0.00 0.00 2.90
1670 2803 9.390795 CAGATTTTTCTTTGAACATCAGTACAG 57.609 33.333 0.00 0.00 0.00 2.74
1671 2804 9.342308 AGATTTTTCTTTGAACATCAGTACAGA 57.658 29.630 0.00 0.00 0.00 3.41
1672 2805 9.387123 GATTTTTCTTTGAACATCAGTACAGAC 57.613 33.333 0.00 0.00 0.00 3.51
1673 2806 7.857734 TTTTCTTTGAACATCAGTACAGACA 57.142 32.000 0.00 0.00 0.00 3.41
1674 2807 6.844696 TTCTTTGAACATCAGTACAGACAC 57.155 37.500 0.00 0.00 0.00 3.67
1675 2808 5.912892 TCTTTGAACATCAGTACAGACACA 58.087 37.500 0.00 0.00 0.00 3.72
1676 2809 6.345298 TCTTTGAACATCAGTACAGACACAA 58.655 36.000 0.00 0.00 0.00 3.33
1677 2810 6.479990 TCTTTGAACATCAGTACAGACACAAG 59.520 38.462 0.00 0.00 0.00 3.16
1678 2811 4.058124 TGAACATCAGTACAGACACAAGC 58.942 43.478 0.00 0.00 0.00 4.01
1679 2812 2.677199 ACATCAGTACAGACACAAGCG 58.323 47.619 0.00 0.00 0.00 4.68
1680 2813 1.391485 CATCAGTACAGACACAAGCGC 59.609 52.381 0.00 0.00 0.00 5.92
1681 2814 0.673985 TCAGTACAGACACAAGCGCT 59.326 50.000 2.64 2.64 0.00 5.92
1682 2815 1.063806 CAGTACAGACACAAGCGCTC 58.936 55.000 12.06 0.00 0.00 5.03
1683 2816 0.673985 AGTACAGACACAAGCGCTCA 59.326 50.000 12.06 0.00 0.00 4.26
1684 2817 1.273606 AGTACAGACACAAGCGCTCAT 59.726 47.619 12.06 0.00 0.00 2.90
1685 2818 2.492088 AGTACAGACACAAGCGCTCATA 59.508 45.455 12.06 0.00 0.00 2.15
1686 2819 2.680312 ACAGACACAAGCGCTCATAT 57.320 45.000 12.06 0.00 0.00 1.78
1687 2820 3.801114 ACAGACACAAGCGCTCATATA 57.199 42.857 12.06 0.00 0.00 0.86
1688 2821 3.448686 ACAGACACAAGCGCTCATATAC 58.551 45.455 12.06 1.00 0.00 1.47
1689 2822 3.119137 ACAGACACAAGCGCTCATATACA 60.119 43.478 12.06 0.00 0.00 2.29
1690 2823 3.243877 CAGACACAAGCGCTCATATACAC 59.756 47.826 12.06 0.00 0.00 2.90
1691 2824 3.119137 AGACACAAGCGCTCATATACACA 60.119 43.478 12.06 0.00 0.00 3.72
1692 2825 3.797039 ACACAAGCGCTCATATACACAT 58.203 40.909 12.06 0.00 0.00 3.21
1693 2826 3.557185 ACACAAGCGCTCATATACACATG 59.443 43.478 12.06 3.16 0.00 3.21
1694 2827 3.557185 CACAAGCGCTCATATACACATGT 59.443 43.478 12.06 3.94 0.00 3.21
1695 2828 4.744631 CACAAGCGCTCATATACACATGTA 59.255 41.667 12.06 0.00 34.67 2.29
1696 2829 5.406477 CACAAGCGCTCATATACACATGTAT 59.594 40.000 12.06 9.40 43.15 2.29
1697 2830 6.586082 CACAAGCGCTCATATACACATGTATA 59.414 38.462 12.06 12.88 44.66 1.47
1698 2831 6.586463 ACAAGCGCTCATATACACATGTATAC 59.414 38.462 12.06 0.00 43.74 1.47
1699 2832 6.267496 AGCGCTCATATACACATGTATACA 57.733 37.500 2.64 8.27 43.74 2.29
1700 2833 6.093404 AGCGCTCATATACACATGTATACAC 58.907 40.000 2.64 4.05 43.74 2.90
1701 2834 6.071896 AGCGCTCATATACACATGTATACACT 60.072 38.462 2.64 0.00 43.74 3.55
1702 2835 6.251589 GCGCTCATATACACATGTATACACTC 59.748 42.308 7.96 4.37 43.74 3.51
1703 2836 7.305474 CGCTCATATACACATGTATACACTCA 58.695 38.462 7.96 0.00 43.74 3.41
1704 2837 7.970614 CGCTCATATACACATGTATACACTCAT 59.029 37.037 7.96 0.68 43.74 2.90
1705 2838 9.295214 GCTCATATACACATGTATACACTCATC 57.705 37.037 7.96 0.00 43.74 2.92
1706 2839 9.794685 CTCATATACACATGTATACACTCATCC 57.205 37.037 7.96 0.00 43.74 3.51
1707 2840 8.749354 TCATATACACATGTATACACTCATCCC 58.251 37.037 7.96 0.00 43.74 3.85
1708 2841 8.753133 CATATACACATGTATACACTCATCCCT 58.247 37.037 7.96 0.00 43.74 4.20
1709 2842 9.990868 ATATACACATGTATACACTCATCCCTA 57.009 33.333 7.96 0.00 43.74 3.53
1710 2843 8.901472 ATACACATGTATACACTCATCCCTAT 57.099 34.615 7.96 0.00 39.29 2.57
1711 2844 6.997655 ACACATGTATACACTCATCCCTATG 58.002 40.000 7.96 1.01 0.00 2.23
1712 2845 6.782494 ACACATGTATACACTCATCCCTATGA 59.218 38.462 7.96 0.00 39.87 2.15
1713 2846 7.290014 ACACATGTATACACTCATCCCTATGAA 59.710 37.037 7.96 0.00 41.57 2.57
1714 2847 7.600375 CACATGTATACACTCATCCCTATGAAC 59.400 40.741 7.96 0.00 41.57 3.18
1715 2848 6.327279 TGTATACACTCATCCCTATGAACG 57.673 41.667 0.08 0.00 41.57 3.95
1716 2849 2.604046 ACACTCATCCCTATGAACGC 57.396 50.000 0.00 0.00 41.57 4.84
1717 2850 1.831106 ACACTCATCCCTATGAACGCA 59.169 47.619 0.00 0.00 41.57 5.24
1718 2851 2.205074 CACTCATCCCTATGAACGCAC 58.795 52.381 0.00 0.00 41.57 5.34
1719 2852 1.831106 ACTCATCCCTATGAACGCACA 59.169 47.619 0.00 0.00 41.57 4.57
1720 2853 2.205074 CTCATCCCTATGAACGCACAC 58.795 52.381 0.00 0.00 41.57 3.82
1721 2854 1.552792 TCATCCCTATGAACGCACACA 59.447 47.619 0.00 0.00 39.20 3.72
1722 2855 1.665679 CATCCCTATGAACGCACACAC 59.334 52.381 0.00 0.00 34.84 3.82
1723 2856 0.973632 TCCCTATGAACGCACACACT 59.026 50.000 0.00 0.00 0.00 3.55
1724 2857 2.172679 TCCCTATGAACGCACACACTA 58.827 47.619 0.00 0.00 0.00 2.74
1725 2858 2.094390 TCCCTATGAACGCACACACTAC 60.094 50.000 0.00 0.00 0.00 2.73
1726 2859 2.268298 CCTATGAACGCACACACTACC 58.732 52.381 0.00 0.00 0.00 3.18
1727 2860 2.268298 CTATGAACGCACACACTACCC 58.732 52.381 0.00 0.00 0.00 3.69
1728 2861 0.321298 ATGAACGCACACACTACCCC 60.321 55.000 0.00 0.00 0.00 4.95
1729 2862 1.370064 GAACGCACACACTACCCCT 59.630 57.895 0.00 0.00 0.00 4.79
1730 2863 0.604578 GAACGCACACACTACCCCTA 59.395 55.000 0.00 0.00 0.00 3.53
1731 2864 1.206371 GAACGCACACACTACCCCTAT 59.794 52.381 0.00 0.00 0.00 2.57
1732 2865 0.535335 ACGCACACACTACCCCTATG 59.465 55.000 0.00 0.00 0.00 2.23
1733 2866 0.821517 CGCACACACTACCCCTATGA 59.178 55.000 0.00 0.00 0.00 2.15
1734 2867 1.206132 CGCACACACTACCCCTATGAA 59.794 52.381 0.00 0.00 0.00 2.57
1735 2868 2.629051 GCACACACTACCCCTATGAAC 58.371 52.381 0.00 0.00 0.00 3.18
1736 2869 2.027561 GCACACACTACCCCTATGAACA 60.028 50.000 0.00 0.00 0.00 3.18
1737 2870 3.596214 CACACACTACCCCTATGAACAC 58.404 50.000 0.00 0.00 0.00 3.32
1738 2871 2.570302 ACACACTACCCCTATGAACACC 59.430 50.000 0.00 0.00 0.00 4.16
1739 2872 2.838202 CACACTACCCCTATGAACACCT 59.162 50.000 0.00 0.00 0.00 4.00
1740 2873 3.263425 CACACTACCCCTATGAACACCTT 59.737 47.826 0.00 0.00 0.00 3.50
1741 2874 3.914435 ACACTACCCCTATGAACACCTTT 59.086 43.478 0.00 0.00 0.00 3.11
1742 2875 4.261801 CACTACCCCTATGAACACCTTTG 58.738 47.826 0.00 0.00 0.00 2.77
1743 2876 4.019681 CACTACCCCTATGAACACCTTTGA 60.020 45.833 0.00 0.00 0.00 2.69
1744 2877 4.600111 ACTACCCCTATGAACACCTTTGAA 59.400 41.667 0.00 0.00 0.00 2.69
1745 2878 4.463050 ACCCCTATGAACACCTTTGAAA 57.537 40.909 0.00 0.00 0.00 2.69
1746 2879 4.407365 ACCCCTATGAACACCTTTGAAAG 58.593 43.478 0.00 0.00 0.00 2.62
1747 2880 4.105697 ACCCCTATGAACACCTTTGAAAGA 59.894 41.667 6.49 0.00 0.00 2.52
1748 2881 4.459337 CCCCTATGAACACCTTTGAAAGAC 59.541 45.833 6.49 0.00 0.00 3.01
1749 2882 5.316987 CCCTATGAACACCTTTGAAAGACT 58.683 41.667 6.49 0.00 0.00 3.24
1750 2883 5.182001 CCCTATGAACACCTTTGAAAGACTG 59.818 44.000 6.49 3.96 0.00 3.51
1751 2884 5.997746 CCTATGAACACCTTTGAAAGACTGA 59.002 40.000 6.49 0.00 0.00 3.41
1752 2885 6.148480 CCTATGAACACCTTTGAAAGACTGAG 59.852 42.308 6.49 0.00 0.00 3.35
1753 2886 3.627577 TGAACACCTTTGAAAGACTGAGC 59.372 43.478 6.49 0.93 0.00 4.26
1754 2887 2.576615 ACACCTTTGAAAGACTGAGCC 58.423 47.619 6.49 0.00 0.00 4.70
1755 2888 1.532868 CACCTTTGAAAGACTGAGCCG 59.467 52.381 6.49 0.00 0.00 5.52
1756 2889 1.160137 CCTTTGAAAGACTGAGCCGG 58.840 55.000 6.49 0.00 0.00 6.13
1757 2890 0.519077 CTTTGAAAGACTGAGCCGGC 59.481 55.000 21.89 21.89 0.00 6.13
1758 2891 0.179032 TTTGAAAGACTGAGCCGGCA 60.179 50.000 31.54 7.98 0.00 5.69
1759 2892 0.036732 TTGAAAGACTGAGCCGGCAT 59.963 50.000 31.54 14.28 0.00 4.40
1760 2893 0.901827 TGAAAGACTGAGCCGGCATA 59.098 50.000 31.54 16.21 0.00 3.14
1761 2894 1.486310 TGAAAGACTGAGCCGGCATAT 59.514 47.619 31.54 8.11 0.00 1.78
1762 2895 2.139118 GAAAGACTGAGCCGGCATATC 58.861 52.381 31.54 18.63 0.00 1.63
1763 2896 1.123077 AAGACTGAGCCGGCATATCA 58.877 50.000 31.54 22.44 0.00 2.15
1764 2897 1.346062 AGACTGAGCCGGCATATCAT 58.654 50.000 31.54 13.17 0.00 2.45
1765 2898 1.696336 AGACTGAGCCGGCATATCATT 59.304 47.619 31.54 17.84 0.00 2.57
1766 2899 2.105477 AGACTGAGCCGGCATATCATTT 59.895 45.455 31.54 13.22 0.00 2.32
1767 2900 2.880890 GACTGAGCCGGCATATCATTTT 59.119 45.455 31.54 10.68 0.00 1.82
1768 2901 4.065088 GACTGAGCCGGCATATCATTTTA 58.935 43.478 31.54 0.00 0.00 1.52
1769 2902 4.460263 ACTGAGCCGGCATATCATTTTAA 58.540 39.130 31.54 0.00 0.00 1.52
1770 2903 4.887071 ACTGAGCCGGCATATCATTTTAAA 59.113 37.500 31.54 0.00 0.00 1.52
1771 2904 5.359576 ACTGAGCCGGCATATCATTTTAAAA 59.640 36.000 31.54 2.51 0.00 1.52
1772 2905 6.040842 ACTGAGCCGGCATATCATTTTAAAAT 59.959 34.615 31.54 7.64 0.00 1.82
1773 2906 6.815089 TGAGCCGGCATATCATTTTAAAATT 58.185 32.000 31.54 0.00 0.00 1.82
1774 2907 7.271511 TGAGCCGGCATATCATTTTAAAATTT 58.728 30.769 31.54 0.00 0.00 1.82
1775 2908 8.417106 TGAGCCGGCATATCATTTTAAAATTTA 58.583 29.630 31.54 6.73 0.00 1.40
1776 2909 9.255304 GAGCCGGCATATCATTTTAAAATTTAA 57.745 29.630 31.54 0.88 0.00 1.52
1777 2910 9.606631 AGCCGGCATATCATTTTAAAATTTAAA 57.393 25.926 31.54 6.80 0.00 1.52
1801 2934 3.207354 CCGTAGGCACCTCGTCAT 58.793 61.111 0.00 0.00 46.14 3.06
1802 2935 1.226974 CCGTAGGCACCTCGTCATG 60.227 63.158 0.00 0.00 46.14 3.07
1803 2936 1.226974 CGTAGGCACCTCGTCATGG 60.227 63.158 0.00 0.00 0.00 3.66
1804 2937 1.663379 CGTAGGCACCTCGTCATGGA 61.663 60.000 0.00 0.00 0.00 3.41
1805 2938 0.179108 GTAGGCACCTCGTCATGGAC 60.179 60.000 0.00 0.00 0.00 4.02
1806 2939 0.324368 TAGGCACCTCGTCATGGACT 60.324 55.000 0.00 0.00 0.00 3.85
1807 2940 1.448540 GGCACCTCGTCATGGACTG 60.449 63.158 0.00 0.00 0.00 3.51
1808 2941 1.448540 GCACCTCGTCATGGACTGG 60.449 63.158 0.00 0.00 32.86 4.00
1809 2942 1.219124 CACCTCGTCATGGACTGGG 59.781 63.158 0.00 6.59 31.62 4.45
1810 2943 1.990060 ACCTCGTCATGGACTGGGG 60.990 63.158 0.00 5.85 34.58 4.96
1811 2944 1.685765 CCTCGTCATGGACTGGGGA 60.686 63.158 0.00 0.00 31.74 4.81
1812 2945 1.050988 CCTCGTCATGGACTGGGGAT 61.051 60.000 0.00 0.00 31.74 3.85
1813 2946 1.704641 CTCGTCATGGACTGGGGATA 58.295 55.000 0.00 0.00 0.00 2.59
1814 2947 1.341531 CTCGTCATGGACTGGGGATAC 59.658 57.143 0.00 0.00 0.00 2.24
1832 2965 6.936968 GGATACCACAATCCCTCTAACTAT 57.063 41.667 0.00 0.00 39.74 2.12
1833 2966 6.937392 GGATACCACAATCCCTCTAACTATC 58.063 44.000 0.00 0.00 39.74 2.08
1834 2967 6.070710 GGATACCACAATCCCTCTAACTATCC 60.071 46.154 0.00 0.00 39.74 2.59
1835 2968 4.631234 ACCACAATCCCTCTAACTATCCA 58.369 43.478 0.00 0.00 0.00 3.41
1836 2969 5.036916 ACCACAATCCCTCTAACTATCCAA 58.963 41.667 0.00 0.00 0.00 3.53
1837 2970 5.104485 ACCACAATCCCTCTAACTATCCAAC 60.104 44.000 0.00 0.00 0.00 3.77
1838 2971 5.368989 CACAATCCCTCTAACTATCCAACC 58.631 45.833 0.00 0.00 0.00 3.77
1839 2972 5.036916 ACAATCCCTCTAACTATCCAACCA 58.963 41.667 0.00 0.00 0.00 3.67
1840 2973 5.104485 ACAATCCCTCTAACTATCCAACCAC 60.104 44.000 0.00 0.00 0.00 4.16
1841 2974 4.069312 TCCCTCTAACTATCCAACCACA 57.931 45.455 0.00 0.00 0.00 4.17
1842 2975 4.030913 TCCCTCTAACTATCCAACCACAG 58.969 47.826 0.00 0.00 0.00 3.66
1843 2976 3.134804 CCCTCTAACTATCCAACCACAGG 59.865 52.174 0.00 0.00 0.00 4.00
1844 2977 3.775316 CCTCTAACTATCCAACCACAGGT 59.225 47.826 0.00 0.00 37.65 4.00
1860 2993 4.706476 CCACAGGTTGGTTGATTATGATGT 59.294 41.667 0.00 0.00 41.10 3.06
2216 3350 3.715628 GCGCCACAAATTTCATATCCT 57.284 42.857 0.00 0.00 0.00 3.24
2220 3354 6.908825 GCGCCACAAATTTCATATCCTAATA 58.091 36.000 0.00 0.00 0.00 0.98
2289 3966 7.918033 TGAACGATGTTAAATTCAAAAGCTCAA 59.082 29.630 0.00 0.00 0.00 3.02
2292 3969 8.564574 ACGATGTTAAATTCAAAAGCTCAAGTA 58.435 29.630 0.00 0.00 0.00 2.24
2293 3970 8.840867 CGATGTTAAATTCAAAAGCTCAAGTAC 58.159 33.333 0.00 0.00 0.00 2.73
2305 4752 9.683069 CAAAAGCTCAAGTACATATGTTTTTCT 57.317 29.630 14.77 5.34 0.00 2.52
2481 4973 8.651389 AGTGGCTTCTTCTACTATAATGCAATA 58.349 33.333 0.00 0.00 0.00 1.90
2612 5107 7.119116 CACACTTAGCAAACTATCCATTGTACA 59.881 37.037 0.00 0.00 0.00 2.90
3187 5694 5.467399 TCGTTGTTACATCAGTTTAAGTGGG 59.533 40.000 0.00 0.00 0.00 4.61
3335 5844 3.751175 TGTATGAGTGCTTTAGGTGTTGC 59.249 43.478 0.00 0.00 0.00 4.17
3353 5865 9.243105 AGGTGTTGCTATGTAATAACTCAAATT 57.757 29.630 0.00 0.00 0.00 1.82
3376 5888 7.658525 TTTGTCATGCATGGAATTTATACCT 57.341 32.000 25.97 0.00 0.00 3.08
3536 6052 4.504132 GGTTTGTGCAAAACCGCA 57.496 50.000 20.34 0.00 40.10 5.69
3537 6053 2.755929 GGTTTGTGCAAAACCGCAA 58.244 47.368 20.34 4.79 45.14 4.85
3569 6087 8.964420 AAAATCCACGTATGACAAATACAAAG 57.036 30.769 0.00 0.00 0.00 2.77
3639 6157 4.756084 CAAAACCTTGGTTGCACAAAAA 57.244 36.364 5.74 0.00 0.00 1.94
3778 6296 8.087750 CACCTTTTTGGAAGAATAATAACAGCA 58.912 33.333 0.00 0.00 39.71 4.41
3802 6321 2.351738 CGGAGGAAGGCAACACAATTTC 60.352 50.000 0.00 0.00 41.41 2.17
3874 6393 5.605564 TCACACTTCATAATTTGTCACCG 57.394 39.130 0.00 0.00 0.00 4.94
3886 6405 8.611757 CATAATTTGTCACCGTGAGAATGATAA 58.388 33.333 11.57 0.00 29.45 1.75
3893 6412 5.817296 TCACCGTGAGAATGATAATTTCCAG 59.183 40.000 0.00 0.00 0.00 3.86
3895 6414 4.818546 CCGTGAGAATGATAATTTCCAGCT 59.181 41.667 0.00 0.00 0.00 4.24
3896 6415 5.991606 CCGTGAGAATGATAATTTCCAGCTA 59.008 40.000 0.00 0.00 0.00 3.32
3900 6419 9.060347 GTGAGAATGATAATTTCCAGCTATCAA 57.940 33.333 0.00 0.00 36.06 2.57
3960 6487 4.164796 TCTTGCACATCCCAGAGTTCATAT 59.835 41.667 0.00 0.00 0.00 1.78
4044 6571 6.942532 TGTCACCAAGAATATCAATAAGCC 57.057 37.500 0.00 0.00 0.00 4.35
4091 6735 8.519526 GTCATATCACAAACTTAAAATCCCACA 58.480 33.333 0.00 0.00 0.00 4.17
4116 6761 6.041979 AGTGGCAAACTAAAATCATTGGAAGT 59.958 34.615 0.00 0.00 37.36 3.01
4131 6776 5.585820 TTGGAAGTCAACTTTTGGGTAAC 57.414 39.130 0.00 0.00 36.11 2.50
4161 6806 6.857777 ATGAACAAAATTTCCGCATTTTCA 57.142 29.167 0.00 0.00 34.70 2.69
4229 6874 9.918630 CTGGAACAAATTTCAGATATTTGACTT 57.081 29.630 24.89 14.14 43.43 3.01
4288 6933 4.941263 TCATAATGAACTAAGCGGCAACTT 59.059 37.500 1.45 0.00 0.00 2.66
4289 6934 6.110033 TCATAATGAACTAAGCGGCAACTTA 58.890 36.000 1.45 0.00 0.00 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
15 16 6.127366 ACCATAACGTACGGGATAGAGAAAAA 60.127 38.462 21.06 0.00 0.00 1.94
16 17 5.360714 ACCATAACGTACGGGATAGAGAAAA 59.639 40.000 21.06 0.00 0.00 2.29
17 18 4.889409 ACCATAACGTACGGGATAGAGAAA 59.111 41.667 21.06 0.00 0.00 2.52
18 19 4.464008 ACCATAACGTACGGGATAGAGAA 58.536 43.478 21.06 0.00 0.00 2.87
19 20 4.067896 GACCATAACGTACGGGATAGAGA 58.932 47.826 21.06 0.00 0.00 3.10
20 21 3.817084 TGACCATAACGTACGGGATAGAG 59.183 47.826 21.06 4.44 0.00 2.43
21 22 3.819368 TGACCATAACGTACGGGATAGA 58.181 45.455 21.06 0.00 0.00 1.98
22 23 4.778534 ATGACCATAACGTACGGGATAG 57.221 45.455 21.06 7.79 0.00 2.08
23 24 8.523915 AATATATGACCATAACGTACGGGATA 57.476 34.615 21.06 9.99 0.00 2.59
24 25 7.341256 AGAATATATGACCATAACGTACGGGAT 59.659 37.037 21.06 9.28 0.00 3.85
25 26 6.660521 AGAATATATGACCATAACGTACGGGA 59.339 38.462 21.06 7.05 0.00 5.14
26 27 6.860080 AGAATATATGACCATAACGTACGGG 58.140 40.000 21.06 13.29 0.00 5.28
36 37 9.965902 GGTCTTTGGAATAGAATATATGACCAT 57.034 33.333 0.00 0.00 38.93 3.55
37 38 8.944138 TGGTCTTTGGAATAGAATATATGACCA 58.056 33.333 0.00 0.00 44.24 4.02
38 39 9.793259 TTGGTCTTTGGAATAGAATATATGACC 57.207 33.333 0.00 0.00 39.37 4.02
46 47 9.093458 AGAATTGTTTGGTCTTTGGAATAGAAT 57.907 29.630 0.00 0.00 0.00 2.40
47 48 8.477419 AGAATTGTTTGGTCTTTGGAATAGAA 57.523 30.769 0.00 0.00 0.00 2.10
48 49 8.359642 CAAGAATTGTTTGGTCTTTGGAATAGA 58.640 33.333 0.00 0.00 42.34 1.98
49 50 8.524870 CAAGAATTGTTTGGTCTTTGGAATAG 57.475 34.615 0.00 0.00 42.34 1.73
66 67 8.492748 CAAAGTTCACATTTGGATCAAGAATTG 58.507 33.333 0.00 0.00 39.41 2.32
67 68 7.172019 GCAAAGTTCACATTTGGATCAAGAATT 59.828 33.333 0.00 0.00 37.96 2.17
68 69 6.647895 GCAAAGTTCACATTTGGATCAAGAAT 59.352 34.615 0.00 0.00 37.96 2.40
69 70 5.984926 GCAAAGTTCACATTTGGATCAAGAA 59.015 36.000 0.00 0.00 37.96 2.52
70 71 5.509501 GGCAAAGTTCACATTTGGATCAAGA 60.510 40.000 0.00 0.00 37.96 3.02
71 72 4.687483 GGCAAAGTTCACATTTGGATCAAG 59.313 41.667 0.00 0.00 37.96 3.02
72 73 4.100653 TGGCAAAGTTCACATTTGGATCAA 59.899 37.500 0.00 0.00 37.96 2.57
73 74 3.640498 TGGCAAAGTTCACATTTGGATCA 59.360 39.130 0.00 0.00 37.96 2.92
74 75 3.989817 GTGGCAAAGTTCACATTTGGATC 59.010 43.478 0.00 0.00 37.96 3.36
75 76 3.552684 CGTGGCAAAGTTCACATTTGGAT 60.553 43.478 0.00 0.00 37.96 3.41
76 77 2.223688 CGTGGCAAAGTTCACATTTGGA 60.224 45.455 0.00 0.00 37.96 3.53
77 78 2.126467 CGTGGCAAAGTTCACATTTGG 58.874 47.619 0.00 0.00 37.96 3.28
78 79 1.522258 GCGTGGCAAAGTTCACATTTG 59.478 47.619 0.00 0.00 39.99 2.32
79 80 1.408702 AGCGTGGCAAAGTTCACATTT 59.591 42.857 0.00 0.00 33.83 2.32
80 81 1.001378 GAGCGTGGCAAAGTTCACATT 60.001 47.619 0.00 0.00 33.83 2.71
81 82 0.593128 GAGCGTGGCAAAGTTCACAT 59.407 50.000 0.00 0.00 33.83 3.21
82 83 1.444119 GGAGCGTGGCAAAGTTCACA 61.444 55.000 9.51 0.00 33.83 3.58
83 84 1.282875 GGAGCGTGGCAAAGTTCAC 59.717 57.895 9.51 0.00 0.00 3.18
84 85 1.153066 TGGAGCGTGGCAAAGTTCA 60.153 52.632 9.51 0.00 0.00 3.18
85 86 1.576421 CTGGAGCGTGGCAAAGTTC 59.424 57.895 0.00 0.00 0.00 3.01
86 87 2.555547 GCTGGAGCGTGGCAAAGTT 61.556 57.895 0.00 0.00 0.00 2.66
87 88 2.980233 GCTGGAGCGTGGCAAAGT 60.980 61.111 0.00 0.00 0.00 2.66
88 89 3.741476 GGCTGGAGCGTGGCAAAG 61.741 66.667 0.00 0.00 43.26 2.77
89 90 4.577677 TGGCTGGAGCGTGGCAAA 62.578 61.111 0.00 0.00 43.26 3.68
90 91 4.577677 TTGGCTGGAGCGTGGCAA 62.578 61.111 0.00 0.00 44.48 4.52
91 92 4.577677 TTTGGCTGGAGCGTGGCA 62.578 61.111 0.00 0.00 43.26 4.92
92 93 2.158561 AATTTTGGCTGGAGCGTGGC 62.159 55.000 0.00 0.00 43.26 5.01
93 94 0.318120 AAATTTTGGCTGGAGCGTGG 59.682 50.000 0.00 0.00 43.26 4.94
94 95 2.061028 GAAAATTTTGGCTGGAGCGTG 58.939 47.619 8.47 0.00 43.26 5.34
95 96 1.000843 GGAAAATTTTGGCTGGAGCGT 59.999 47.619 8.47 0.00 43.26 5.07
96 97 1.000731 TGGAAAATTTTGGCTGGAGCG 59.999 47.619 8.47 0.00 43.26 5.03
97 98 2.691927 CTGGAAAATTTTGGCTGGAGC 58.308 47.619 8.47 0.00 41.14 4.70
98 99 2.613725 GGCTGGAAAATTTTGGCTGGAG 60.614 50.000 8.47 0.00 0.00 3.86
99 100 1.347378 GGCTGGAAAATTTTGGCTGGA 59.653 47.619 8.47 0.00 0.00 3.86
100 101 1.812235 GGCTGGAAAATTTTGGCTGG 58.188 50.000 8.47 0.00 0.00 4.85
101 102 1.431496 CGGCTGGAAAATTTTGGCTG 58.569 50.000 8.47 10.62 0.00 4.85
102 103 0.320683 GCGGCTGGAAAATTTTGGCT 60.321 50.000 8.47 0.00 0.00 4.75
103 104 1.298157 GGCGGCTGGAAAATTTTGGC 61.298 55.000 8.47 9.46 0.00 4.52
104 105 0.034616 TGGCGGCTGGAAAATTTTGG 59.965 50.000 8.47 0.00 0.00 3.28
105 106 1.431496 CTGGCGGCTGGAAAATTTTG 58.569 50.000 8.47 0.00 0.00 2.44
106 107 0.320683 GCTGGCGGCTGGAAAATTTT 60.321 50.000 11.99 2.28 38.06 1.82
107 108 1.293179 GCTGGCGGCTGGAAAATTT 59.707 52.632 11.99 0.00 38.06 1.82
108 109 1.470996 TTGCTGGCGGCTGGAAAATT 61.471 50.000 20.66 0.00 42.39 1.82
109 110 1.907807 TTGCTGGCGGCTGGAAAAT 60.908 52.632 20.66 0.00 42.39 1.82
110 111 2.520500 TTGCTGGCGGCTGGAAAA 60.521 55.556 20.66 1.41 42.39 2.29
111 112 3.294493 GTTGCTGGCGGCTGGAAA 61.294 61.111 22.42 7.98 42.39 3.13
125 126 0.179200 GGATTACTGCAACGCCGTTG 60.179 55.000 24.76 24.76 45.24 4.10
126 127 0.321298 AGGATTACTGCAACGCCGTT 60.321 50.000 0.00 0.00 0.00 4.44
127 128 0.533491 TAGGATTACTGCAACGCCGT 59.467 50.000 0.00 0.00 0.00 5.68
128 129 1.792949 GATAGGATTACTGCAACGCCG 59.207 52.381 0.00 0.00 0.00 6.46
129 130 2.802816 CAGATAGGATTACTGCAACGCC 59.197 50.000 0.00 0.00 0.00 5.68
130 131 2.802816 CCAGATAGGATTACTGCAACGC 59.197 50.000 0.00 0.00 41.22 4.84
131 132 3.804325 CACCAGATAGGATTACTGCAACG 59.196 47.826 0.00 0.00 41.22 4.10
132 133 4.130118 CCACCAGATAGGATTACTGCAAC 58.870 47.826 0.00 0.00 41.22 4.17
133 134 4.037222 TCCACCAGATAGGATTACTGCAA 58.963 43.478 0.00 0.00 41.22 4.08
134 135 3.653164 TCCACCAGATAGGATTACTGCA 58.347 45.455 0.00 0.00 41.22 4.41
135 136 4.284490 TGATCCACCAGATAGGATTACTGC 59.716 45.833 0.00 0.00 44.44 4.40
136 137 6.617782 ATGATCCACCAGATAGGATTACTG 57.382 41.667 0.00 0.00 44.44 2.74
137 138 5.420421 CGATGATCCACCAGATAGGATTACT 59.580 44.000 0.00 0.00 44.44 2.24
138 139 5.419155 TCGATGATCCACCAGATAGGATTAC 59.581 44.000 0.00 0.00 44.44 1.89
139 140 5.580022 TCGATGATCCACCAGATAGGATTA 58.420 41.667 0.00 0.00 44.44 1.75
140 141 4.420206 TCGATGATCCACCAGATAGGATT 58.580 43.478 0.00 0.00 44.44 3.01
141 142 4.022603 CTCGATGATCCACCAGATAGGAT 58.977 47.826 0.00 0.00 46.98 3.24
142 143 3.181428 ACTCGATGATCCACCAGATAGGA 60.181 47.826 0.00 0.00 41.22 2.94
143 144 3.056962 CACTCGATGATCCACCAGATAGG 60.057 52.174 0.00 0.00 45.67 2.57
144 145 3.823304 TCACTCGATGATCCACCAGATAG 59.177 47.826 0.00 0.00 34.42 2.08
145 146 3.832527 TCACTCGATGATCCACCAGATA 58.167 45.455 0.00 0.00 34.42 1.98
146 147 2.670939 TCACTCGATGATCCACCAGAT 58.329 47.619 0.00 0.00 38.17 2.90
147 148 2.143876 TCACTCGATGATCCACCAGA 57.856 50.000 0.00 0.00 29.99 3.86
156 157 4.217983 CCATCAGATGAGATCACTCGATGA 59.782 45.833 12.41 0.00 45.25 2.92
157 158 4.487019 CCATCAGATGAGATCACTCGATG 58.513 47.826 12.41 8.93 45.25 3.84
158 159 3.056678 GCCATCAGATGAGATCACTCGAT 60.057 47.826 12.41 0.00 45.25 3.59
159 160 2.295629 GCCATCAGATGAGATCACTCGA 59.704 50.000 12.41 0.00 45.25 4.04
160 161 2.674954 GCCATCAGATGAGATCACTCG 58.325 52.381 12.41 0.00 45.25 4.18
161 162 2.609984 CCGCCATCAGATGAGATCACTC 60.610 54.545 12.41 0.00 42.88 3.51
162 163 1.343789 CCGCCATCAGATGAGATCACT 59.656 52.381 12.41 0.00 0.00 3.41
208 209 5.705905 ACGGAAAGGATTTACTCTTTCTTGG 59.294 40.000 13.27 7.62 44.75 3.61
214 215 5.617252 TGACAACGGAAAGGATTTACTCTT 58.383 37.500 0.00 0.00 39.27 2.85
219 220 4.331968 AGCATGACAACGGAAAGGATTTA 58.668 39.130 0.00 0.00 39.27 1.40
225 226 3.067106 AGTGTAGCATGACAACGGAAAG 58.933 45.455 0.00 0.00 0.00 2.62
227 228 2.805671 CAAGTGTAGCATGACAACGGAA 59.194 45.455 0.00 0.00 0.00 4.30
236 237 8.633075 TTTCTTTTTCTTTCAAGTGTAGCATG 57.367 30.769 0.00 0.00 0.00 4.06
237 238 8.470002 ACTTTCTTTTTCTTTCAAGTGTAGCAT 58.530 29.630 0.00 0.00 0.00 3.79
267 272 9.979897 ATATACTATACGTACCACCTTATCCAA 57.020 33.333 0.00 0.00 0.00 3.53
269 274 9.401058 ACATATACTATACGTACCACCTTATCC 57.599 37.037 0.00 0.00 0.00 2.59
272 277 9.964354 ATGACATATACTATACGTACCACCTTA 57.036 33.333 0.00 0.00 0.00 2.69
275 280 6.971184 GCATGACATATACTATACGTACCACC 59.029 42.308 0.00 0.00 0.00 4.61
276 281 7.532571 TGCATGACATATACTATACGTACCAC 58.467 38.462 0.00 0.00 0.00 4.16
277 282 7.690952 TGCATGACATATACTATACGTACCA 57.309 36.000 0.00 0.00 0.00 3.25
278 283 8.403236 TCATGCATGACATATACTATACGTACC 58.597 37.037 25.42 0.00 36.64 3.34
279 284 9.952188 ATCATGCATGACATATACTATACGTAC 57.048 33.333 30.92 0.00 40.03 3.67
281 286 8.470002 ACATCATGCATGACATATACTATACGT 58.530 33.333 30.92 7.67 40.03 3.57
282 287 8.862550 ACATCATGCATGACATATACTATACG 57.137 34.615 30.92 4.84 40.03 3.06
285 290 8.537858 ACAGACATCATGCATGACATATACTAT 58.462 33.333 30.92 9.65 40.03 2.12
286 291 7.816031 CACAGACATCATGCATGACATATACTA 59.184 37.037 30.92 6.46 40.03 1.82
288 293 6.647895 TCACAGACATCATGCATGACATATAC 59.352 38.462 30.92 17.73 40.03 1.47
289 294 6.647895 GTCACAGACATCATGCATGACATATA 59.352 38.462 30.92 8.83 40.03 0.86
306 368 2.890808 TGAACCACAGAGTCACAGAC 57.109 50.000 0.00 0.00 0.00 3.51
333 433 2.224793 GGAACCAAGGGAGTAGCAGTTT 60.225 50.000 0.00 0.00 0.00 2.66
335 435 0.984995 GGAACCAAGGGAGTAGCAGT 59.015 55.000 0.00 0.00 0.00 4.40
336 436 0.984230 TGGAACCAAGGGAGTAGCAG 59.016 55.000 0.00 0.00 0.00 4.24
338 438 2.579410 TTTGGAACCAAGGGAGTAGC 57.421 50.000 6.39 0.00 37.24 3.58
359 459 5.587043 TCTGAACTAAAACCACGACACAATT 59.413 36.000 0.00 0.00 0.00 2.32
362 462 4.116961 CTCTGAACTAAAACCACGACACA 58.883 43.478 0.00 0.00 0.00 3.72
363 463 3.493503 CCTCTGAACTAAAACCACGACAC 59.506 47.826 0.00 0.00 0.00 3.67
364 464 3.385433 TCCTCTGAACTAAAACCACGACA 59.615 43.478 0.00 0.00 0.00 4.35
365 465 3.986277 TCCTCTGAACTAAAACCACGAC 58.014 45.455 0.00 0.00 0.00 4.34
366 466 4.342951 TCTTCCTCTGAACTAAAACCACGA 59.657 41.667 0.00 0.00 0.00 4.35
367 467 4.628074 TCTTCCTCTGAACTAAAACCACG 58.372 43.478 0.00 0.00 0.00 4.94
368 468 6.289064 TCTTCTTCCTCTGAACTAAAACCAC 58.711 40.000 0.00 0.00 0.00 4.16
370 470 6.937465 ACATCTTCTTCCTCTGAACTAAAACC 59.063 38.462 0.00 0.00 0.00 3.27
371 471 7.971183 ACATCTTCTTCCTCTGAACTAAAAC 57.029 36.000 0.00 0.00 0.00 2.43
372 472 7.993183 ACAACATCTTCTTCCTCTGAACTAAAA 59.007 33.333 0.00 0.00 0.00 1.52
373 473 7.442364 CACAACATCTTCTTCCTCTGAACTAAA 59.558 37.037 0.00 0.00 0.00 1.85
374 474 6.931281 CACAACATCTTCTTCCTCTGAACTAA 59.069 38.462 0.00 0.00 0.00 2.24
375 475 6.459066 CACAACATCTTCTTCCTCTGAACTA 58.541 40.000 0.00 0.00 0.00 2.24
376 476 5.303971 CACAACATCTTCTTCCTCTGAACT 58.696 41.667 0.00 0.00 0.00 3.01
377 477 4.083590 GCACAACATCTTCTTCCTCTGAAC 60.084 45.833 0.00 0.00 0.00 3.18
379 479 3.326006 AGCACAACATCTTCTTCCTCTGA 59.674 43.478 0.00 0.00 0.00 3.27
382 482 2.670414 CGAGCACAACATCTTCTTCCTC 59.330 50.000 0.00 0.00 0.00 3.71
383 483 2.037772 ACGAGCACAACATCTTCTTCCT 59.962 45.455 0.00 0.00 0.00 3.36
384 484 2.417719 ACGAGCACAACATCTTCTTCC 58.582 47.619 0.00 0.00 0.00 3.46
385 485 4.474226 AAACGAGCACAACATCTTCTTC 57.526 40.909 0.00 0.00 0.00 2.87
386 486 4.261197 GGAAAACGAGCACAACATCTTCTT 60.261 41.667 0.00 0.00 0.00 2.52
387 487 3.251004 GGAAAACGAGCACAACATCTTCT 59.749 43.478 0.00 0.00 0.00 2.85
406 650 2.270352 AACGTCAAAGCAGGATGGAA 57.730 45.000 0.00 0.00 35.86 3.53
407 651 2.354704 CCTAACGTCAAAGCAGGATGGA 60.355 50.000 0.00 0.00 35.86 3.41
415 659 1.130561 GGTGATGCCTAACGTCAAAGC 59.869 52.381 0.00 0.00 45.83 3.51
451 701 1.154225 GAAAACCTGCATCGCGTGG 60.154 57.895 5.77 4.70 0.00 4.94
452 702 1.154225 GGAAAACCTGCATCGCGTG 60.154 57.895 5.77 5.06 0.00 5.34
453 703 1.298859 GAGGAAAACCTGCATCGCGT 61.299 55.000 5.77 0.00 0.00 6.01
454 704 1.425428 GAGGAAAACCTGCATCGCG 59.575 57.895 0.00 0.00 0.00 5.87
455 705 1.019278 TCGAGGAAAACCTGCATCGC 61.019 55.000 0.00 0.00 0.00 4.58
456 706 1.328680 CATCGAGGAAAACCTGCATCG 59.671 52.381 0.00 0.00 0.00 3.84
457 707 1.064654 GCATCGAGGAAAACCTGCATC 59.935 52.381 0.00 0.00 0.00 3.91
458 708 1.098050 GCATCGAGGAAAACCTGCAT 58.902 50.000 0.00 0.00 0.00 3.96
510 890 2.805099 CTCCGTCGTGGTAGTATAGTCC 59.195 54.545 0.00 0.00 39.52 3.85
511 891 2.222911 GCTCCGTCGTGGTAGTATAGTC 59.777 54.545 0.00 0.00 39.52 2.59
512 892 2.216898 GCTCCGTCGTGGTAGTATAGT 58.783 52.381 0.00 0.00 39.52 2.12
514 894 2.216046 CTGCTCCGTCGTGGTAGTATA 58.784 52.381 0.00 0.00 39.52 1.47
516 896 1.651240 GCTGCTCCGTCGTGGTAGTA 61.651 60.000 0.00 0.00 39.52 1.82
517 897 2.991076 GCTGCTCCGTCGTGGTAGT 61.991 63.158 0.00 0.00 39.52 2.73
518 898 2.202623 GCTGCTCCGTCGTGGTAG 60.203 66.667 0.00 0.00 39.52 3.18
524 910 1.457303 GCTATTTATGCTGCTCCGTCG 59.543 52.381 0.00 0.00 0.00 5.12
527 913 1.502231 ACGCTATTTATGCTGCTCCG 58.498 50.000 0.00 0.00 0.00 4.63
569 961 4.142071 TGTGCTGCTAGGTCTCTGATAAAG 60.142 45.833 0.00 0.00 0.00 1.85
574 966 1.547820 CTTGTGCTGCTAGGTCTCTGA 59.452 52.381 0.00 0.00 0.00 3.27
582 974 2.783135 TCCTTTTCCTTGTGCTGCTAG 58.217 47.619 0.00 0.00 0.00 3.42
583 975 2.949177 TCCTTTTCCTTGTGCTGCTA 57.051 45.000 0.00 0.00 0.00 3.49
584 976 1.959282 CTTCCTTTTCCTTGTGCTGCT 59.041 47.619 0.00 0.00 0.00 4.24
585 977 1.603931 GCTTCCTTTTCCTTGTGCTGC 60.604 52.381 0.00 0.00 0.00 5.25
586 978 1.682854 TGCTTCCTTTTCCTTGTGCTG 59.317 47.619 0.00 0.00 0.00 4.41
587 979 2.071778 TGCTTCCTTTTCCTTGTGCT 57.928 45.000 0.00 0.00 0.00 4.40
596 1008 3.055167 GGCCACCATTATTGCTTCCTTTT 60.055 43.478 0.00 0.00 0.00 2.27
652 1066 0.682855 AGGGAGAGCAAGGAGACGAG 60.683 60.000 0.00 0.00 0.00 4.18
1058 2030 3.760035 GCTCGCCCACCTTCTCGA 61.760 66.667 0.00 0.00 0.00 4.04
1512 2486 5.230182 TGCAAAACACACACACAAAATGTA 58.770 33.333 0.00 0.00 40.64 2.29
1520 2494 1.389784 GCAGTTGCAAAACACACACAC 59.610 47.619 0.00 0.00 41.59 3.82
1537 2513 7.804614 TTTAATTTTAAATACGCCACTGCAG 57.195 32.000 13.48 13.48 37.32 4.41
1573 2704 9.729281 TCGATACTAACATTAAAAAGGAAAGGT 57.271 29.630 0.00 0.00 0.00 3.50
1650 2783 6.821160 TGTGTCTGTACTGATGTTCAAAGAAA 59.179 34.615 5.69 0.00 0.00 2.52
1651 2784 6.345298 TGTGTCTGTACTGATGTTCAAAGAA 58.655 36.000 5.69 0.00 0.00 2.52
1652 2785 5.912892 TGTGTCTGTACTGATGTTCAAAGA 58.087 37.500 5.69 0.00 0.00 2.52
1653 2786 6.603237 TTGTGTCTGTACTGATGTTCAAAG 57.397 37.500 5.69 0.00 0.00 2.77
1654 2787 5.007626 GCTTGTGTCTGTACTGATGTTCAAA 59.992 40.000 5.69 0.00 0.00 2.69
1655 2788 4.511454 GCTTGTGTCTGTACTGATGTTCAA 59.489 41.667 5.69 8.15 0.00 2.69
1656 2789 4.058124 GCTTGTGTCTGTACTGATGTTCA 58.942 43.478 5.69 0.00 0.00 3.18
1657 2790 3.121944 CGCTTGTGTCTGTACTGATGTTC 59.878 47.826 5.69 0.00 0.00 3.18
1658 2791 3.059884 CGCTTGTGTCTGTACTGATGTT 58.940 45.455 5.69 0.00 0.00 2.71
1659 2792 2.677199 CGCTTGTGTCTGTACTGATGT 58.323 47.619 5.69 0.00 0.00 3.06
1660 2793 1.391485 GCGCTTGTGTCTGTACTGATG 59.609 52.381 0.00 0.00 0.00 3.07
1661 2794 1.273606 AGCGCTTGTGTCTGTACTGAT 59.726 47.619 2.64 0.00 0.00 2.90
1662 2795 0.673985 AGCGCTTGTGTCTGTACTGA 59.326 50.000 2.64 0.00 0.00 3.41
1663 2796 1.063806 GAGCGCTTGTGTCTGTACTG 58.936 55.000 13.26 0.00 0.00 2.74
1664 2797 0.673985 TGAGCGCTTGTGTCTGTACT 59.326 50.000 13.26 0.00 0.00 2.73
1665 2798 1.714794 ATGAGCGCTTGTGTCTGTAC 58.285 50.000 13.26 0.00 0.00 2.90
1666 2799 3.801114 ATATGAGCGCTTGTGTCTGTA 57.199 42.857 13.26 0.00 0.00 2.74
1667 2800 2.680312 ATATGAGCGCTTGTGTCTGT 57.320 45.000 13.26 0.00 0.00 3.41
1668 2801 3.243877 GTGTATATGAGCGCTTGTGTCTG 59.756 47.826 13.26 0.00 0.00 3.51
1669 2802 3.119137 TGTGTATATGAGCGCTTGTGTCT 60.119 43.478 13.26 0.00 0.00 3.41
1670 2803 3.186909 TGTGTATATGAGCGCTTGTGTC 58.813 45.455 13.26 0.00 0.00 3.67
1671 2804 3.245518 TGTGTATATGAGCGCTTGTGT 57.754 42.857 13.26 4.27 0.00 3.72
1672 2805 3.557185 ACATGTGTATATGAGCGCTTGTG 59.443 43.478 13.26 1.44 33.99 3.33
1673 2806 3.797039 ACATGTGTATATGAGCGCTTGT 58.203 40.909 13.26 4.54 0.00 3.16
1674 2807 6.586082 TGTATACATGTGTATATGAGCGCTTG 59.414 38.462 13.26 3.77 43.11 4.01
1675 2808 6.586463 GTGTATACATGTGTATATGAGCGCTT 59.414 38.462 13.26 0.00 43.11 4.68
1676 2809 6.071896 AGTGTATACATGTGTATATGAGCGCT 60.072 38.462 11.27 11.27 43.11 5.92
1677 2810 6.093404 AGTGTATACATGTGTATATGAGCGC 58.907 40.000 9.11 0.00 43.11 5.92
1678 2811 7.305474 TGAGTGTATACATGTGTATATGAGCG 58.695 38.462 9.11 0.00 43.11 5.03
1679 2812 9.295214 GATGAGTGTATACATGTGTATATGAGC 57.705 37.037 9.11 4.56 43.11 4.26
1680 2813 9.794685 GGATGAGTGTATACATGTGTATATGAG 57.205 37.037 9.11 0.00 43.11 2.90
1681 2814 8.749354 GGGATGAGTGTATACATGTGTATATGA 58.251 37.037 9.11 4.25 43.11 2.15
1682 2815 8.753133 AGGGATGAGTGTATACATGTGTATATG 58.247 37.037 9.11 0.00 43.11 1.78
1683 2816 8.901472 AGGGATGAGTGTATACATGTGTATAT 57.099 34.615 9.11 0.00 43.11 0.86
1684 2817 9.990868 ATAGGGATGAGTGTATACATGTGTATA 57.009 33.333 9.11 8.43 41.18 1.47
1685 2818 8.753133 CATAGGGATGAGTGTATACATGTGTAT 58.247 37.037 9.11 10.25 38.75 2.29
1686 2819 7.947890 TCATAGGGATGAGTGTATACATGTGTA 59.052 37.037 9.11 2.80 37.15 2.90
1687 2820 6.782494 TCATAGGGATGAGTGTATACATGTGT 59.218 38.462 9.11 4.04 37.15 3.72
1688 2821 7.232118 TCATAGGGATGAGTGTATACATGTG 57.768 40.000 9.11 0.00 37.15 3.21
1689 2822 7.523873 CGTTCATAGGGATGAGTGTATACATGT 60.524 40.741 9.18 2.69 43.03 3.21
1690 2823 6.808704 CGTTCATAGGGATGAGTGTATACATG 59.191 42.308 9.18 0.00 43.03 3.21
1691 2824 6.572509 GCGTTCATAGGGATGAGTGTATACAT 60.573 42.308 9.18 0.00 43.03 2.29
1692 2825 5.278808 GCGTTCATAGGGATGAGTGTATACA 60.279 44.000 0.08 0.08 43.03 2.29
1693 2826 5.162075 GCGTTCATAGGGATGAGTGTATAC 58.838 45.833 0.00 0.00 43.03 1.47
1694 2827 4.830600 TGCGTTCATAGGGATGAGTGTATA 59.169 41.667 0.00 0.00 43.03 1.47
1695 2828 3.641436 TGCGTTCATAGGGATGAGTGTAT 59.359 43.478 0.00 0.00 43.03 2.29
1696 2829 3.028130 TGCGTTCATAGGGATGAGTGTA 58.972 45.455 0.00 0.00 43.03 2.90
1697 2830 1.831106 TGCGTTCATAGGGATGAGTGT 59.169 47.619 0.00 0.00 43.03 3.55
1698 2831 2.205074 GTGCGTTCATAGGGATGAGTG 58.795 52.381 0.00 0.00 43.03 3.51
1699 2832 1.831106 TGTGCGTTCATAGGGATGAGT 59.169 47.619 0.00 0.00 43.03 3.41
1700 2833 2.205074 GTGTGCGTTCATAGGGATGAG 58.795 52.381 0.00 0.00 43.03 2.90
1701 2834 1.552792 TGTGTGCGTTCATAGGGATGA 59.447 47.619 0.00 0.00 40.45 2.92
1702 2835 1.665679 GTGTGTGCGTTCATAGGGATG 59.334 52.381 0.00 0.00 0.00 3.51
1703 2836 1.555075 AGTGTGTGCGTTCATAGGGAT 59.445 47.619 0.00 0.00 0.00 3.85
1704 2837 0.973632 AGTGTGTGCGTTCATAGGGA 59.026 50.000 0.00 0.00 0.00 4.20
1705 2838 2.268298 GTAGTGTGTGCGTTCATAGGG 58.732 52.381 0.00 0.00 0.00 3.53
1706 2839 2.268298 GGTAGTGTGTGCGTTCATAGG 58.732 52.381 0.00 0.00 0.00 2.57
1707 2840 2.268298 GGGTAGTGTGTGCGTTCATAG 58.732 52.381 0.00 0.00 0.00 2.23
1708 2841 1.066716 GGGGTAGTGTGTGCGTTCATA 60.067 52.381 0.00 0.00 0.00 2.15
1709 2842 0.321298 GGGGTAGTGTGTGCGTTCAT 60.321 55.000 0.00 0.00 0.00 2.57
1710 2843 1.070105 GGGGTAGTGTGTGCGTTCA 59.930 57.895 0.00 0.00 0.00 3.18
1711 2844 0.604578 TAGGGGTAGTGTGTGCGTTC 59.395 55.000 0.00 0.00 0.00 3.95
1712 2845 1.066430 CATAGGGGTAGTGTGTGCGTT 60.066 52.381 0.00 0.00 0.00 4.84
1713 2846 0.535335 CATAGGGGTAGTGTGTGCGT 59.465 55.000 0.00 0.00 0.00 5.24
1714 2847 0.821517 TCATAGGGGTAGTGTGTGCG 59.178 55.000 0.00 0.00 0.00 5.34
1715 2848 2.027561 TGTTCATAGGGGTAGTGTGTGC 60.028 50.000 0.00 0.00 0.00 4.57
1716 2849 3.596214 GTGTTCATAGGGGTAGTGTGTG 58.404 50.000 0.00 0.00 0.00 3.82
1717 2850 2.570302 GGTGTTCATAGGGGTAGTGTGT 59.430 50.000 0.00 0.00 0.00 3.72
1718 2851 2.838202 AGGTGTTCATAGGGGTAGTGTG 59.162 50.000 0.00 0.00 0.00 3.82
1719 2852 3.200958 AGGTGTTCATAGGGGTAGTGT 57.799 47.619 0.00 0.00 0.00 3.55
1720 2853 4.019681 TCAAAGGTGTTCATAGGGGTAGTG 60.020 45.833 0.00 0.00 0.00 2.74
1721 2854 4.172807 TCAAAGGTGTTCATAGGGGTAGT 58.827 43.478 0.00 0.00 0.00 2.73
1722 2855 4.837093 TCAAAGGTGTTCATAGGGGTAG 57.163 45.455 0.00 0.00 0.00 3.18
1723 2856 5.311121 TCTTTCAAAGGTGTTCATAGGGGTA 59.689 40.000 0.00 0.00 0.00 3.69
1724 2857 4.105697 TCTTTCAAAGGTGTTCATAGGGGT 59.894 41.667 0.00 0.00 0.00 4.95
1725 2858 4.459337 GTCTTTCAAAGGTGTTCATAGGGG 59.541 45.833 0.00 0.00 0.00 4.79
1726 2859 5.182001 CAGTCTTTCAAAGGTGTTCATAGGG 59.818 44.000 0.00 0.00 0.00 3.53
1727 2860 5.997746 TCAGTCTTTCAAAGGTGTTCATAGG 59.002 40.000 0.00 0.00 0.00 2.57
1728 2861 6.348050 GCTCAGTCTTTCAAAGGTGTTCATAG 60.348 42.308 0.00 0.00 0.00 2.23
1729 2862 5.470098 GCTCAGTCTTTCAAAGGTGTTCATA 59.530 40.000 0.00 0.00 0.00 2.15
1730 2863 4.276926 GCTCAGTCTTTCAAAGGTGTTCAT 59.723 41.667 0.00 0.00 0.00 2.57
1731 2864 3.627577 GCTCAGTCTTTCAAAGGTGTTCA 59.372 43.478 0.00 0.00 0.00 3.18
1732 2865 3.003793 GGCTCAGTCTTTCAAAGGTGTTC 59.996 47.826 0.00 0.00 0.00 3.18
1733 2866 2.952310 GGCTCAGTCTTTCAAAGGTGTT 59.048 45.455 0.00 0.00 0.00 3.32
1734 2867 2.576615 GGCTCAGTCTTTCAAAGGTGT 58.423 47.619 0.00 0.00 0.00 4.16
1735 2868 1.532868 CGGCTCAGTCTTTCAAAGGTG 59.467 52.381 0.00 0.00 0.00 4.00
1736 2869 1.543429 CCGGCTCAGTCTTTCAAAGGT 60.543 52.381 0.00 0.00 0.00 3.50
1737 2870 1.160137 CCGGCTCAGTCTTTCAAAGG 58.840 55.000 0.00 0.00 0.00 3.11
1738 2871 0.519077 GCCGGCTCAGTCTTTCAAAG 59.481 55.000 22.15 0.00 0.00 2.77
1739 2872 0.179032 TGCCGGCTCAGTCTTTCAAA 60.179 50.000 29.70 0.00 0.00 2.69
1740 2873 0.036732 ATGCCGGCTCAGTCTTTCAA 59.963 50.000 29.70 1.81 0.00 2.69
1741 2874 0.901827 TATGCCGGCTCAGTCTTTCA 59.098 50.000 29.70 2.45 0.00 2.69
1742 2875 2.139118 GATATGCCGGCTCAGTCTTTC 58.861 52.381 29.70 9.22 0.00 2.62
1743 2876 1.486310 TGATATGCCGGCTCAGTCTTT 59.514 47.619 29.70 3.35 0.00 2.52
1744 2877 1.123077 TGATATGCCGGCTCAGTCTT 58.877 50.000 29.70 5.10 0.00 3.01
1745 2878 1.346062 ATGATATGCCGGCTCAGTCT 58.654 50.000 29.70 5.43 0.00 3.24
1746 2879 2.175878 AATGATATGCCGGCTCAGTC 57.824 50.000 29.70 19.55 0.00 3.51
1747 2880 2.645838 AAATGATATGCCGGCTCAGT 57.354 45.000 29.70 19.53 0.00 3.41
1748 2881 5.437289 TTTAAAATGATATGCCGGCTCAG 57.563 39.130 29.70 0.00 0.00 3.35
1749 2882 5.843673 TTTTAAAATGATATGCCGGCTCA 57.156 34.783 29.70 23.34 0.00 4.26
1750 2883 7.713764 AAATTTTAAAATGATATGCCGGCTC 57.286 32.000 29.70 17.89 0.00 4.70
1751 2884 9.606631 TTTAAATTTTAAAATGATATGCCGGCT 57.393 25.926 29.70 15.76 0.00 5.52
1765 2898 9.247126 GCCTACGGTGACTTTTTAAATTTTAAA 57.753 29.630 9.69 9.69 0.00 1.52
1766 2899 8.411683 TGCCTACGGTGACTTTTTAAATTTTAA 58.588 29.630 0.00 0.00 0.00 1.52
1767 2900 7.861872 GTGCCTACGGTGACTTTTTAAATTTTA 59.138 33.333 0.00 0.00 0.00 1.52
1768 2901 6.698329 GTGCCTACGGTGACTTTTTAAATTTT 59.302 34.615 0.00 0.00 0.00 1.82
1769 2902 6.210796 GTGCCTACGGTGACTTTTTAAATTT 58.789 36.000 0.00 0.00 0.00 1.82
1770 2903 5.278610 GGTGCCTACGGTGACTTTTTAAATT 60.279 40.000 0.00 0.00 0.00 1.82
1771 2904 4.216902 GGTGCCTACGGTGACTTTTTAAAT 59.783 41.667 0.00 0.00 0.00 1.40
1772 2905 3.565063 GGTGCCTACGGTGACTTTTTAAA 59.435 43.478 0.00 0.00 0.00 1.52
1773 2906 3.140623 GGTGCCTACGGTGACTTTTTAA 58.859 45.455 0.00 0.00 0.00 1.52
1774 2907 2.369532 AGGTGCCTACGGTGACTTTTTA 59.630 45.455 0.00 0.00 0.00 1.52
1775 2908 1.142262 AGGTGCCTACGGTGACTTTTT 59.858 47.619 0.00 0.00 0.00 1.94
1776 2909 0.763035 AGGTGCCTACGGTGACTTTT 59.237 50.000 0.00 0.00 0.00 2.27
1777 2910 0.320697 GAGGTGCCTACGGTGACTTT 59.679 55.000 0.00 0.00 0.00 2.66
1778 2911 1.874345 CGAGGTGCCTACGGTGACTT 61.874 60.000 0.00 0.00 0.00 3.01
1779 2912 2.341101 CGAGGTGCCTACGGTGACT 61.341 63.158 0.00 0.00 0.00 3.41
1780 2913 2.181021 CGAGGTGCCTACGGTGAC 59.819 66.667 0.00 0.00 0.00 3.67
1781 2914 2.282674 ACGAGGTGCCTACGGTGA 60.283 61.111 12.22 0.00 0.00 4.02
1782 2915 1.945354 ATGACGAGGTGCCTACGGTG 61.945 60.000 12.22 0.00 0.00 4.94
1783 2916 1.681327 ATGACGAGGTGCCTACGGT 60.681 57.895 12.22 3.01 0.00 4.83
1784 2917 1.226974 CATGACGAGGTGCCTACGG 60.227 63.158 12.22 0.36 0.00 4.02
1785 2918 1.226974 CCATGACGAGGTGCCTACG 60.227 63.158 0.00 0.00 0.00 3.51
1786 2919 0.179108 GTCCATGACGAGGTGCCTAC 60.179 60.000 0.00 0.00 0.00 3.18
1787 2920 0.324368 AGTCCATGACGAGGTGCCTA 60.324 55.000 0.00 0.00 37.67 3.93
1788 2921 1.610673 AGTCCATGACGAGGTGCCT 60.611 57.895 0.00 0.00 37.67 4.75
1789 2922 1.448540 CAGTCCATGACGAGGTGCC 60.449 63.158 0.00 0.00 37.67 5.01
1790 2923 1.448540 CCAGTCCATGACGAGGTGC 60.449 63.158 0.00 0.00 37.67 5.01
1791 2924 1.219124 CCCAGTCCATGACGAGGTG 59.781 63.158 0.00 0.00 37.67 4.00
1792 2925 1.990060 CCCCAGTCCATGACGAGGT 60.990 63.158 0.00 0.00 37.67 3.85
1793 2926 1.050988 ATCCCCAGTCCATGACGAGG 61.051 60.000 0.00 0.00 37.67 4.63
1794 2927 1.341531 GTATCCCCAGTCCATGACGAG 59.658 57.143 0.00 0.00 37.67 4.18
1795 2928 1.410004 GTATCCCCAGTCCATGACGA 58.590 55.000 0.00 0.00 37.67 4.20
1796 2929 0.393077 GGTATCCCCAGTCCATGACG 59.607 60.000 0.00 0.00 37.67 4.35
1797 2930 1.141053 GTGGTATCCCCAGTCCATGAC 59.859 57.143 0.00 0.00 46.45 3.06
1798 2931 1.274126 TGTGGTATCCCCAGTCCATGA 60.274 52.381 0.00 0.00 46.45 3.07
1799 2932 1.212375 TGTGGTATCCCCAGTCCATG 58.788 55.000 0.00 0.00 46.45 3.66
1800 2933 1.979809 TTGTGGTATCCCCAGTCCAT 58.020 50.000 0.00 0.00 46.45 3.41
1801 2934 1.843851 GATTGTGGTATCCCCAGTCCA 59.156 52.381 0.00 0.00 46.45 4.02
1802 2935 1.143073 GGATTGTGGTATCCCCAGTCC 59.857 57.143 0.00 0.00 46.45 3.85
1803 2936 2.640316 GGATTGTGGTATCCCCAGTC 57.360 55.000 0.00 0.00 46.45 3.51
1809 2942 6.070710 GGATAGTTAGAGGGATTGTGGTATCC 60.071 46.154 0.00 0.00 42.84 2.59
1810 2943 6.497259 TGGATAGTTAGAGGGATTGTGGTATC 59.503 42.308 0.00 0.00 0.00 2.24
1811 2944 6.390504 TGGATAGTTAGAGGGATTGTGGTAT 58.609 40.000 0.00 0.00 0.00 2.73
1812 2945 5.784023 TGGATAGTTAGAGGGATTGTGGTA 58.216 41.667 0.00 0.00 0.00 3.25
1813 2946 4.631234 TGGATAGTTAGAGGGATTGTGGT 58.369 43.478 0.00 0.00 0.00 4.16
1814 2947 5.368989 GTTGGATAGTTAGAGGGATTGTGG 58.631 45.833 0.00 0.00 0.00 4.17
1815 2948 5.104527 TGGTTGGATAGTTAGAGGGATTGTG 60.105 44.000 0.00 0.00 0.00 3.33
1816 2949 5.036916 TGGTTGGATAGTTAGAGGGATTGT 58.963 41.667 0.00 0.00 0.00 2.71
1817 2950 5.104527 TGTGGTTGGATAGTTAGAGGGATTG 60.105 44.000 0.00 0.00 0.00 2.67
1818 2951 5.036916 TGTGGTTGGATAGTTAGAGGGATT 58.963 41.667 0.00 0.00 0.00 3.01
1819 2952 4.631234 TGTGGTTGGATAGTTAGAGGGAT 58.369 43.478 0.00 0.00 0.00 3.85
1820 2953 4.030913 CTGTGGTTGGATAGTTAGAGGGA 58.969 47.826 0.00 0.00 0.00 4.20
1821 2954 3.134804 CCTGTGGTTGGATAGTTAGAGGG 59.865 52.174 0.00 0.00 0.00 4.30
1822 2955 3.775316 ACCTGTGGTTGGATAGTTAGAGG 59.225 47.826 0.00 0.00 27.29 3.69
1823 2956 5.422214 AACCTGTGGTTGGATAGTTAGAG 57.578 43.478 0.71 0.00 45.07 2.43
1838 2971 5.902613 ACATCATAATCAACCAACCTGTG 57.097 39.130 0.00 0.00 0.00 3.66
1839 2972 6.957631 TCTACATCATAATCAACCAACCTGT 58.042 36.000 0.00 0.00 0.00 4.00
1840 2973 8.455903 AATCTACATCATAATCAACCAACCTG 57.544 34.615 0.00 0.00 0.00 4.00
2196 3330 3.715628 AGGATATGAAATTTGTGGCGC 57.284 42.857 0.00 0.00 0.00 6.53
2197 3331 8.950210 AGATATTAGGATATGAAATTTGTGGCG 58.050 33.333 0.00 0.00 0.00 5.69
2338 4820 9.533253 CAGGTTGAAAGAAAGAAAAACATATGT 57.467 29.630 1.41 1.41 0.00 2.29
3353 5865 7.658525 AAGGTATAAATTCCATGCATGACAA 57.341 32.000 28.31 19.10 0.00 3.18
3397 5913 7.736447 AAGTCGAGTTTTCTCAAAGATTGAT 57.264 32.000 0.00 0.00 46.47 2.57
3399 5915 7.634522 AGAAAGTCGAGTTTTCTCAAAGATTG 58.365 34.615 18.85 0.00 46.47 2.67
3407 5923 4.474113 TCGCTAGAAAGTCGAGTTTTCTC 58.526 43.478 21.64 10.54 42.30 2.87
3543 6059 9.405587 CTTTGTATTTGTCATACGTGGATTTTT 57.594 29.630 0.00 0.00 0.00 1.94
3569 6087 8.877779 GTGGCTAGAATGACATGTATGAATATC 58.122 37.037 0.00 0.00 0.00 1.63
3778 6296 0.400213 TGTGTTGCCTTCCTCCGATT 59.600 50.000 0.00 0.00 0.00 3.34
3874 6393 8.613060 TGATAGCTGGAAATTATCATTCTCAC 57.387 34.615 0.00 0.00 30.93 3.51
3903 6422 8.667987 TGCGAAATATTCAGACAACAAAATAC 57.332 30.769 0.00 0.00 0.00 1.89
3905 6424 8.761575 AATGCGAAATATTCAGACAACAAAAT 57.238 26.923 0.00 0.00 0.00 1.82
3960 6487 9.639563 TGTTGGAATATTTGGATTATGCTAGAA 57.360 29.630 0.00 0.00 0.00 2.10
4065 6592 8.519526 TGTGGGATTTTAAGTTTGTGATATGAC 58.480 33.333 0.00 0.00 0.00 3.06
4076 6720 3.571590 TGCCACTGTGGGATTTTAAGTT 58.428 40.909 27.02 0.00 38.19 2.66
4091 6735 6.041979 ACTTCCAATGATTTTAGTTTGCCACT 59.958 34.615 0.00 0.00 39.87 4.00
4116 6761 3.278668 TGGTCGTTACCCAAAAGTTGA 57.721 42.857 0.00 0.00 46.16 3.18
4131 6776 4.499040 GCGGAAATTTTGTTCATATGGTCG 59.501 41.667 2.13 0.00 0.00 4.79
4161 6806 2.800629 GCTTTGCTTGTTCTGTGCACAT 60.801 45.455 22.00 0.00 36.37 3.21
4240 6885 9.897744 GATGTAGAACTGAAATTTGATTGTTCA 57.102 29.630 16.98 5.44 37.03 3.18
4241 6886 9.897744 TGATGTAGAACTGAAATTTGATTGTTC 57.102 29.630 0.00 4.97 35.44 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.