Multiple sequence alignment - TraesCS2A01G534900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G534900 chr2A 100.000 6189 0 0 1 6189 750181545 750175357 0.000000e+00 11430.0
1 TraesCS2A01G534900 chr2A 90.962 343 29 2 5567 5907 633948842 633949184 1.570000e-125 460.0
2 TraesCS2A01G534900 chr2A 85.836 353 44 5 1713 2060 522085003 522085354 2.730000e-98 370.0
3 TraesCS2A01G534900 chr7D 92.089 3097 160 42 1 3071 498263201 498266238 0.000000e+00 4283.0
4 TraesCS2A01G534900 chr7D 93.987 1796 88 14 3060 4845 498269955 498271740 0.000000e+00 2700.0
5 TraesCS2A01G534900 chr7D 88.978 499 29 14 4833 5312 498271758 498272249 1.490000e-165 593.0
6 TraesCS2A01G534900 chr7D 87.397 365 38 7 2158 2515 611009452 611009089 4.460000e-111 412.0
7 TraesCS2A01G534900 chr7D 84.103 390 50 12 1688 2070 591481868 591482252 3.530000e-97 366.0
8 TraesCS2A01G534900 chr7D 84.167 360 47 7 2157 2507 579096345 579096703 2.140000e-89 340.0
9 TraesCS2A01G534900 chr7D 79.570 465 53 23 2067 2516 578492939 578493376 1.690000e-75 294.0
10 TraesCS2A01G534900 chr7D 86.986 146 19 0 5319 5464 40415935 40415790 1.380000e-36 165.0
11 TraesCS2A01G534900 chr7D 97.368 38 1 0 5318 5355 211636899 211636936 1.440000e-06 65.8
12 TraesCS2A01G534900 chrUn 94.058 1683 92 6 3165 4844 183186700 183185023 0.000000e+00 2547.0
13 TraesCS2A01G534900 chrUn 91.542 1135 62 16 1178 2306 183139911 183138805 0.000000e+00 1533.0
14 TraesCS2A01G534900 chrUn 91.542 1135 61 17 1178 2306 183135543 183134438 0.000000e+00 1531.0
15 TraesCS2A01G534900 chrUn 94.417 806 38 5 4042 4844 183133287 183132486 0.000000e+00 1232.0
16 TraesCS2A01G534900 chrUn 88.673 874 56 17 1 849 183136931 183136076 0.000000e+00 1026.0
17 TraesCS2A01G534900 chrUn 88.673 874 56 17 1 849 183141299 183140444 0.000000e+00 1026.0
18 TraesCS2A01G534900 chrUn 88.673 874 56 17 1 849 361021174 361020319 0.000000e+00 1026.0
19 TraesCS2A01G534900 chrUn 87.965 565 45 9 1 553 323443891 323443338 0.000000e+00 645.0
20 TraesCS2A01G534900 chrUn 92.757 428 28 3 4843 5269 183132456 183132031 3.170000e-172 616.0
21 TraesCS2A01G534900 chrUn 92.523 428 29 3 4843 5269 183184993 183184568 1.470000e-170 610.0
22 TraesCS2A01G534900 chrUn 92.523 428 29 3 4843 5269 254882756 254882331 1.470000e-170 610.0
23 TraesCS2A01G534900 chrUn 88.518 479 36 7 2379 2838 183188469 183187991 4.190000e-156 562.0
24 TraesCS2A01G534900 chrUn 88.125 480 37 7 2379 2838 183138800 183138321 2.520000e-153 553.0
25 TraesCS2A01G534900 chrUn 92.412 369 19 5 893 1254 183140300 183139934 9.200000e-143 518.0
26 TraesCS2A01G534900 chrUn 91.870 369 21 5 893 1254 183135932 183135566 1.990000e-139 507.0
27 TraesCS2A01G534900 chrUn 91.870 369 21 5 893 1254 361020175 361019809 1.990000e-139 507.0
28 TraesCS2A01G534900 chrUn 88.350 309 12 8 2838 3138 183187439 183187147 3.550000e-92 350.0
29 TraesCS2A01G534900 chrUn 88.026 309 13 10 2838 3138 183137769 183137477 1.650000e-90 344.0
30 TraesCS2A01G534900 chrUn 83.891 329 39 9 5255 5573 183184551 183184227 1.010000e-77 302.0
31 TraesCS2A01G534900 chrUn 83.841 328 40 9 5255 5573 183132014 183131691 3.630000e-77 300.0
32 TraesCS2A01G534900 chrUn 83.636 330 39 10 5255 5573 254882315 254881990 4.690000e-76 296.0
33 TraesCS2A01G534900 chrUn 85.401 274 29 6 5926 6189 183131646 183131374 2.200000e-69 274.0
34 TraesCS2A01G534900 chrUn 85.401 274 29 6 5926 6189 183184182 183183910 2.200000e-69 274.0
35 TraesCS2A01G534900 chrUn 85.401 274 29 6 5926 6189 254881945 254881673 2.200000e-69 274.0
36 TraesCS2A01G534900 chrUn 93.220 177 12 0 1178 1354 361019786 361019610 1.710000e-65 261.0
37 TraesCS2A01G534900 chr2B 90.968 1229 89 14 2948 4169 757192845 757194058 0.000000e+00 1635.0
38 TraesCS2A01G534900 chr2B 93.559 590 34 3 4251 4839 757194273 757194859 0.000000e+00 876.0
39 TraesCS2A01G534900 chr2B 91.153 373 21 5 4833 5202 757194886 757195249 4.310000e-136 496.0
40 TraesCS2A01G534900 chr2B 80.357 448 49 19 2073 2508 625495019 625495439 2.800000e-78 303.0
41 TraesCS2A01G534900 chr2B 82.186 247 36 6 1277 1520 423908377 423908136 8.130000e-49 206.0
42 TraesCS2A01G534900 chr2B 85.586 111 12 4 2669 2775 311151237 311151347 5.070000e-21 113.0
43 TraesCS2A01G534900 chr2B 85.586 111 12 4 2669 2775 315654694 315654584 5.070000e-21 113.0
44 TraesCS2A01G534900 chr2B 94.000 50 3 0 4209 4258 757194057 757194106 6.650000e-10 76.8
45 TraesCS2A01G534900 chr4D 82.406 1114 134 37 4187 5261 44423687 44424777 0.000000e+00 915.0
46 TraesCS2A01G534900 chr4D 85.677 768 86 19 3311 4061 44422845 44423605 0.000000e+00 787.0
47 TraesCS2A01G534900 chr4D 83.671 839 110 17 3237 4059 44435219 44436046 0.000000e+00 765.0
48 TraesCS2A01G534900 chr4D 80.869 967 110 45 4331 5248 44436362 44437302 0.000000e+00 691.0
49 TraesCS2A01G534900 chr4D 84.555 382 45 13 2158 2530 40758449 40758825 3.530000e-97 366.0
50 TraesCS2A01G534900 chr4D 90.452 199 17 2 1008 1205 44419160 44419357 1.710000e-65 261.0
51 TraesCS2A01G534900 chr4D 92.222 90 5 2 2067 2156 40758384 40758471 6.510000e-25 126.0
52 TraesCS2A01G534900 chr4D 100.000 31 0 0 2508 2538 52011715 52011745 2.410000e-04 58.4
53 TraesCS2A01G534900 chr4A 85.882 765 87 17 3311 4061 555561176 555560419 0.000000e+00 795.0
54 TraesCS2A01G534900 chr4A 82.479 839 120 21 3237 4059 555517723 555516896 0.000000e+00 710.0
55 TraesCS2A01G534900 chr4A 79.078 1128 149 55 4186 5264 555516813 555515724 0.000000e+00 695.0
56 TraesCS2A01G534900 chr4A 83.008 665 71 24 4187 4822 555560337 555559686 1.160000e-156 564.0
57 TraesCS2A01G534900 chr4A 90.476 189 18 0 1017 1205 555523689 555523501 3.700000e-62 250.0
58 TraesCS2A01G534900 chr4A 90.526 190 16 2 1017 1205 555564171 555563983 3.700000e-62 250.0
59 TraesCS2A01G534900 chr4B 85.473 771 97 13 3299 4059 64103536 64104301 0.000000e+00 789.0
60 TraesCS2A01G534900 chr4B 84.935 770 102 13 3302 4061 64081861 64082626 0.000000e+00 767.0
61 TraesCS2A01G534900 chr4B 79.939 982 120 48 4331 5261 64104618 64105573 0.000000e+00 651.0
62 TraesCS2A01G534900 chr4B 80.602 665 74 21 4187 4822 64082706 64083344 4.370000e-126 462.0
63 TraesCS2A01G534900 chr4B 90.955 199 16 2 1008 1205 64078186 64078383 3.680000e-67 267.0
64 TraesCS2A01G534900 chr4B 86.475 244 26 5 1279 1519 519813020 519813259 1.710000e-65 261.0
65 TraesCS2A01G534900 chr5D 91.765 340 24 3 5572 5907 141585282 141585621 2.610000e-128 470.0
66 TraesCS2A01G534900 chr5D 90.857 350 25 5 5563 5907 350873109 350873456 4.370000e-126 462.0
67 TraesCS2A01G534900 chr5D 85.242 393 47 8 1688 2070 502182743 502182352 1.620000e-105 394.0
68 TraesCS2A01G534900 chr5D 81.818 242 37 6 1282 1520 222503006 222502769 4.890000e-46 196.0
69 TraesCS2A01G534900 chr2D 91.143 350 26 4 5563 5907 425099007 425098658 2.610000e-128 470.0
70 TraesCS2A01G534900 chr2D 83.014 365 51 9 2153 2508 351288431 351288793 2.780000e-83 320.0
71 TraesCS2A01G534900 chr5A 91.496 341 25 3 5573 5909 522704362 522704022 3.380000e-127 466.0
72 TraesCS2A01G534900 chr5A 84.496 387 54 6 1688 2070 379830067 379829683 1.630000e-100 377.0
73 TraesCS2A01G534900 chr5A 80.851 235 34 9 2153 2382 699321360 699321588 2.290000e-39 174.0
74 TraesCS2A01G534900 chr1D 91.496 341 25 3 5571 5907 287299851 287300191 3.380000e-127 466.0
75 TraesCS2A01G534900 chr1D 86.076 316 39 4 2153 2465 296736212 296736525 9.940000e-88 335.0
76 TraesCS2A01G534900 chr1D 83.333 222 31 5 1282 1499 323916556 323916775 3.780000e-47 200.0
77 TraesCS2A01G534900 chr1D 85.586 111 12 4 2669 2775 450545144 450545034 5.070000e-21 113.0
78 TraesCS2A01G534900 chr6D 91.040 346 27 4 5573 5914 17098972 17099317 1.220000e-126 464.0
79 TraesCS2A01G534900 chr6D 90.857 350 27 4 5563 5907 293593311 293593660 1.220000e-126 464.0
80 TraesCS2A01G534900 chr3A 90.857 350 27 4 5563 5907 440992148 440991799 1.220000e-126 464.0
81 TraesCS2A01G534900 chr3A 84.254 362 47 9 2156 2508 345579231 345579591 1.650000e-90 344.0
82 TraesCS2A01G534900 chr3A 76.661 557 125 4 3322 3874 24004828 24004273 2.800000e-78 303.0
83 TraesCS2A01G534900 chr5B 87.179 390 42 7 1688 2070 626066087 626065699 2.650000e-118 436.0
84 TraesCS2A01G534900 chr5B 83.425 362 43 11 2159 2508 618468153 618467797 2.780000e-83 320.0
85 TraesCS2A01G534900 chr5B 78.300 447 46 24 2072 2509 509195487 509195083 2.230000e-59 241.0
86 TraesCS2A01G534900 chr7A 84.103 390 53 8 1688 2070 644771649 644772036 9.800000e-98 368.0
87 TraesCS2A01G534900 chr7A 97.368 38 1 0 5318 5355 223526780 223526817 1.440000e-06 65.8
88 TraesCS2A01G534900 chr3D 83.799 358 43 12 2164 2508 430130578 430130933 5.980000e-85 326.0
89 TraesCS2A01G534900 chr3D 77.117 555 118 8 3322 3870 13190536 13191087 4.660000e-81 313.0
90 TraesCS2A01G534900 chr3D 82.065 184 31 2 1019 1201 13190280 13190462 8.310000e-34 156.0
91 TraesCS2A01G534900 chr7B 84.400 250 31 6 1282 1527 41291848 41291603 8.020000e-59 239.0
92 TraesCS2A01G534900 chr7B 83.471 242 34 5 1282 1520 102232189 102231951 2.900000e-53 220.0
93 TraesCS2A01G534900 chr7B 86.486 111 11 4 2669 2775 54198567 54198457 1.090000e-22 119.0
94 TraesCS2A01G534900 chr7B 85.586 111 12 4 2669 2775 696014712 696014602 5.070000e-21 113.0
95 TraesCS2A01G534900 chr7B 91.837 49 4 0 2509 2557 374554309 374554261 1.110000e-07 69.4
96 TraesCS2A01G534900 chr7B 91.489 47 4 0 5318 5364 189900820 189900774 1.440000e-06 65.8
97 TraesCS2A01G534900 chr3B 79.661 236 22 12 2073 2307 784464660 784464870 5.000000e-31 147.0
98 TraesCS2A01G534900 chr3B 79.325 237 22 14 2073 2307 784534046 784534257 2.330000e-29 141.0
99 TraesCS2A01G534900 chr1B 86.486 111 11 4 2669 2775 281035119 281035009 1.090000e-22 119.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G534900 chr2A 750175357 750181545 6188 True 11430.000000 11430 100.000000 1 6189 1 chr2A.!!$R1 6188
1 TraesCS2A01G534900 chr7D 498263201 498272249 9048 False 2525.333333 4283 91.684667 1 5312 3 chr7D.!!$F5 5311
2 TraesCS2A01G534900 chrUn 183131374 183141299 9925 True 788.333333 1533 89.773250 1 6189 12 chrUn.!!$R2 6188
3 TraesCS2A01G534900 chrUn 183183910 183188469 4559 True 774.166667 2547 88.790167 2379 6189 6 chrUn.!!$R3 3810
4 TraesCS2A01G534900 chrUn 323443338 323443891 553 True 645.000000 645 87.965000 1 553 1 chrUn.!!$R1 552
5 TraesCS2A01G534900 chrUn 361019610 361021174 1564 True 598.000000 1026 91.254333 1 1354 3 chrUn.!!$R5 1353
6 TraesCS2A01G534900 chrUn 254881673 254882756 1083 True 393.333333 610 87.186667 4843 6189 3 chrUn.!!$R4 1346
7 TraesCS2A01G534900 chr2B 757192845 757195249 2404 False 770.950000 1635 92.420000 2948 5202 4 chr2B.!!$F3 2254
8 TraesCS2A01G534900 chr4D 44435219 44437302 2083 False 728.000000 765 82.270000 3237 5248 2 chr4D.!!$F4 2011
9 TraesCS2A01G534900 chr4D 44419160 44424777 5617 False 654.333333 915 86.178333 1008 5261 3 chr4D.!!$F3 4253
10 TraesCS2A01G534900 chr4A 555515724 555517723 1999 True 702.500000 710 80.778500 3237 5264 2 chr4A.!!$R2 2027
11 TraesCS2A01G534900 chr4A 555559686 555564171 4485 True 536.333333 795 86.472000 1017 4822 3 chr4A.!!$R3 3805
12 TraesCS2A01G534900 chr4B 64103536 64105573 2037 False 720.000000 789 82.706000 3299 5261 2 chr4B.!!$F3 1962
13 TraesCS2A01G534900 chr4B 64078186 64083344 5158 False 498.666667 767 85.497333 1008 4822 3 chr4B.!!$F2 3814
14 TraesCS2A01G534900 chr3A 24004273 24004828 555 True 303.000000 303 76.661000 3322 3874 1 chr3A.!!$R1 552
15 TraesCS2A01G534900 chr3D 13190280 13191087 807 False 234.500000 313 79.591000 1019 3870 2 chr3D.!!$F2 2851

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
485 502 0.037326 AGGCTATCACCACACACACG 60.037 55.000 0.00 0.0 0.00 4.49 F
1224 1468 0.037326 TGAAGAACGTAGGCAGGCAG 60.037 55.000 0.00 0.0 0.00 4.85 F
3041 6258 0.751643 GGGTTAGCATTGGCCATCGT 60.752 55.000 6.09 0.0 42.56 3.73 F
3119 10064 1.359474 AGAGGAGTGGCTAGAGTGGAA 59.641 52.381 0.00 0.0 0.00 3.53 F
4533 16282 0.179067 GACAACGACAGGGTGGTGAA 60.179 55.000 0.00 0.0 0.00 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2466 5039 1.411501 GGCCTCCATTGATGCCCTTTA 60.412 52.381 0.0 0.0 44.09 1.85 R
3142 10136 0.973632 ACTATGTGGAAGGCGTGACA 59.026 50.000 0.0 0.0 0.00 3.58 R
4366 16113 0.038892 GCTCGTTCGACACCCTAACA 60.039 55.000 0.0 0.0 0.00 2.41 R
4579 16328 0.242017 GCACAGGTTGGATGCTGTTC 59.758 55.000 0.0 0.0 36.40 3.18 R
5805 17695 0.036164 TGCGAGGTAAGTTGTGGCAT 59.964 50.000 0.0 0.0 0.00 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
51 52 4.750098 TCACATCGAGTTTCCAAGAAAGTC 59.250 41.667 12.78 12.78 0.00 3.01
53 54 5.180117 CACATCGAGTTTCCAAGAAAGTCAT 59.820 40.000 19.58 11.88 31.61 3.06
54 55 5.765182 ACATCGAGTTTCCAAGAAAGTCATT 59.235 36.000 19.58 7.75 31.61 2.57
55 56 5.924475 TCGAGTTTCCAAGAAAGTCATTC 57.076 39.130 19.58 0.47 38.39 2.67
59 60 5.200483 AGTTTCCAAGAAAGTCATTCCACA 58.800 37.500 0.00 0.00 38.94 4.17
62 63 5.964958 TCCAAGAAAGTCATTCCACATTC 57.035 39.130 0.00 0.00 38.94 2.67
63 64 4.766891 TCCAAGAAAGTCATTCCACATTCC 59.233 41.667 0.00 0.00 38.94 3.01
66 67 6.377996 CCAAGAAAGTCATTCCACATTCCATA 59.622 38.462 0.00 0.00 38.94 2.74
109 110 8.273780 AGCTGATAGTTTTGTCTAAATCCTTG 57.726 34.615 0.00 0.00 0.00 3.61
143 144 4.270245 TGTCAGAGACATGCATTGTACA 57.730 40.909 0.00 0.00 39.18 2.90
197 209 5.464030 TCAAGTTACCTAACAGACTGTCC 57.536 43.478 8.93 0.00 38.62 4.02
258 271 5.325239 AGTACAAGAATTTGGAAAGAGGGG 58.675 41.667 0.00 0.00 38.66 4.79
292 309 3.244770 TGTGAGAATAAAGGTGGGTGGAC 60.245 47.826 0.00 0.00 0.00 4.02
317 334 6.241645 GGAGGGGGTGAATAGAAATAAGATG 58.758 44.000 0.00 0.00 0.00 2.90
422 439 8.767478 TCAACTTAGTTTTTATAGAAGACGGG 57.233 34.615 0.00 0.00 0.00 5.28
450 467 4.695455 TGTACAAGAATAGCAGGAAAGCAC 59.305 41.667 0.00 0.00 36.85 4.40
476 493 3.265791 GCATATGCTACAGGCTATCACC 58.734 50.000 20.64 0.00 42.39 4.02
477 494 3.306989 GCATATGCTACAGGCTATCACCA 60.307 47.826 20.64 0.00 42.39 4.17
478 495 2.918712 ATGCTACAGGCTATCACCAC 57.081 50.000 0.00 0.00 42.39 4.16
479 496 1.567357 TGCTACAGGCTATCACCACA 58.433 50.000 0.00 0.00 42.39 4.17
485 502 0.037326 AGGCTATCACCACACACACG 60.037 55.000 0.00 0.00 0.00 4.49
533 550 2.507992 CACCTCGCTTCGGCAGAG 60.508 66.667 0.00 0.00 41.88 3.35
548 565 3.567164 CGGCAGAGCAATGATAAATTCCT 59.433 43.478 0.00 0.00 0.00 3.36
595 612 3.273434 TGAAATCAGAGGAAATCCGCAG 58.727 45.455 5.97 0.00 42.08 5.18
678 706 1.341679 GGGTTTCAATCCCACCTACCC 60.342 57.143 0.00 0.00 44.05 3.69
865 897 1.364626 CTAGCTGCGACCAGGCTTTG 61.365 60.000 0.00 0.00 39.54 2.77
883 927 4.531332 CTTTGTACAGAAACAGCAAGCTC 58.469 43.478 0.00 0.00 0.00 4.09
884 928 3.475566 TGTACAGAAACAGCAAGCTCT 57.524 42.857 0.00 0.00 0.00 4.09
885 929 4.600692 TGTACAGAAACAGCAAGCTCTA 57.399 40.909 0.00 0.00 0.00 2.43
886 930 4.560128 TGTACAGAAACAGCAAGCTCTAG 58.440 43.478 0.00 0.00 0.00 2.43
887 931 2.421619 ACAGAAACAGCAAGCTCTAGC 58.578 47.619 0.00 0.00 42.49 3.42
888 932 1.736681 CAGAAACAGCAAGCTCTAGCC 59.263 52.381 0.00 0.00 43.38 3.93
984 1122 5.251764 AGCTACTTCATATATACCGTCGGT 58.748 41.667 22.66 22.66 40.16 4.69
1205 1343 0.818938 TACGGTGTCATGGTACGCAT 59.181 50.000 0.00 0.00 0.00 4.73
1224 1468 0.037326 TGAAGAACGTAGGCAGGCAG 60.037 55.000 0.00 0.00 0.00 4.85
1305 1549 4.529377 ACTACCTCGGTTCTGGTTTATTGA 59.471 41.667 0.00 0.00 37.74 2.57
1330 2087 5.533528 TCCCCTTACTTTTGTGCTAAACTTC 59.466 40.000 0.00 0.00 0.00 3.01
1401 3660 9.598517 TTTTATTGCTGAATTCATATTTGGACC 57.401 29.630 8.96 0.00 0.00 4.46
1502 3761 9.730420 CAAAATACGAAGGGGACAAATAATAAG 57.270 33.333 0.00 0.00 0.00 1.73
1513 3772 6.036844 GGGACAAATAATAAGTCAGGACGAAC 59.963 42.308 0.00 0.00 36.20 3.95
1592 3859 8.432013 TGTTTATGTCATGCCAAGTCTATAGAT 58.568 33.333 5.57 0.00 0.00 1.98
1873 4146 8.511604 AATATTGGACAGAAGTGTTATCTTGG 57.488 34.615 0.00 0.00 36.88 3.61
1877 4150 5.163248 TGGACAGAAGTGTTATCTTGGTTCA 60.163 40.000 0.00 0.00 36.88 3.18
1892 4165 2.262211 GGTTCATTGCCTTTGAATCGC 58.738 47.619 0.00 0.00 35.68 4.58
1902 4175 3.313526 GCCTTTGAATCGCTGTACATGAT 59.686 43.478 0.00 0.03 0.00 2.45
1917 4190 7.209471 TGTACATGATAAACAAAACAGGACC 57.791 36.000 0.00 0.00 0.00 4.46
1936 4209 8.890472 ACAGGACCACCATACATATTACATAAT 58.110 33.333 0.00 0.00 38.94 1.28
2047 4320 3.186909 TGTCAGAGCAATAAATCGGTCG 58.813 45.455 0.00 0.00 34.85 4.79
2070 4599 8.096707 GTCGAAACGATAAATGATGACGATATC 58.903 37.037 0.00 0.00 38.42 1.63
2123 4662 4.712337 TGGAGGCCAGTTTTTGAAAAGTTA 59.288 37.500 5.01 0.00 29.44 2.24
2249 4818 8.455682 ACATATGTGTGTAAATTTTTAGGACGG 58.544 33.333 7.78 0.00 37.14 4.79
2530 5109 8.917088 TCTCGATGATATGGCATAATCTTATCA 58.083 33.333 11.86 10.76 36.43 2.15
2541 5120 3.933861 AATCTTATCAGTCACCCACCC 57.066 47.619 0.00 0.00 0.00 4.61
2559 5150 5.008613 CCCACCCATTAACGATAAATCACTG 59.991 44.000 0.00 0.00 0.00 3.66
3024 6240 3.779738 AGAAAGGGAGAATCAAGAGAGGG 59.220 47.826 0.00 0.00 36.25 4.30
3029 6245 3.181459 GGGAGAATCAAGAGAGGGTTAGC 60.181 52.174 0.00 0.00 36.25 3.09
3030 6246 3.452627 GGAGAATCAAGAGAGGGTTAGCA 59.547 47.826 0.00 0.00 36.25 3.49
3041 6258 0.751643 GGGTTAGCATTGGCCATCGT 60.752 55.000 6.09 0.00 42.56 3.73
3108 10053 4.319177 CTCCAACAGTAAAAGAGGAGTGG 58.681 47.826 0.00 0.00 38.23 4.00
3119 10064 1.359474 AGAGGAGTGGCTAGAGTGGAA 59.641 52.381 0.00 0.00 0.00 3.53
3138 10132 4.109050 GGAATTTTGTCACGCAAACTTGA 58.891 39.130 0.00 0.00 45.70 3.02
3140 10134 5.234116 GGAATTTTGTCACGCAAACTTGATT 59.766 36.000 0.00 0.00 45.70 2.57
3142 10136 6.660887 ATTTTGTCACGCAAACTTGATTTT 57.339 29.167 0.00 0.00 45.70 1.82
3143 10137 5.447478 TTTGTCACGCAAACTTGATTTTG 57.553 34.783 0.00 0.00 41.68 2.44
3145 10139 4.101942 TGTCACGCAAACTTGATTTTGTC 58.898 39.130 0.00 0.00 38.51 3.18
3146 10140 4.101942 GTCACGCAAACTTGATTTTGTCA 58.898 39.130 0.00 0.00 38.51 3.58
3148 10142 3.061928 CACGCAAACTTGATTTTGTCACG 60.062 43.478 0.00 0.00 38.51 4.35
3149 10143 2.097925 CGCAAACTTGATTTTGTCACGC 60.098 45.455 0.00 0.00 38.51 5.34
3151 10145 3.705604 CAAACTTGATTTTGTCACGCCT 58.294 40.909 0.00 0.00 36.32 5.52
3152 10146 4.111916 CAAACTTGATTTTGTCACGCCTT 58.888 39.130 0.00 0.00 36.32 4.35
3158 10152 1.686355 TTTTGTCACGCCTTCCACAT 58.314 45.000 0.00 0.00 0.00 3.21
3236 10873 2.815211 CACCACGAGTCATGGCCG 60.815 66.667 4.84 6.64 41.31 6.13
3258 10976 5.912955 CCGCGTTTGAAATTTTACTCTTTCT 59.087 36.000 4.92 0.00 33.50 2.52
3261 10979 6.849305 GCGTTTGAAATTTTACTCTTTCTCGA 59.151 34.615 0.00 0.00 33.50 4.04
3414 11134 1.730487 CGTCTACATCCAGCGCTCT 59.270 57.895 7.13 0.00 0.00 4.09
3660 12847 2.045926 GCCCTCCACATCGTGCTT 60.046 61.111 0.00 0.00 31.34 3.91
3738 12925 3.624777 GAATGTCACCTGGTGGATCATT 58.375 45.455 27.74 27.74 35.05 2.57
3773 12960 2.188161 CCTACCTCGTCTCCGGCTC 61.188 68.421 0.00 0.00 33.95 4.70
3855 13042 2.922503 TTGTCCCTCGCCTCTGCA 60.923 61.111 0.00 0.00 37.32 4.41
4266 15892 6.253727 GTGAGGTATATAGATAATGCACGCAC 59.746 42.308 0.00 0.00 0.00 5.34
4267 15893 6.071616 TGAGGTATATAGATAATGCACGCACA 60.072 38.462 0.00 0.00 0.00 4.57
4269 15895 6.590292 AGGTATATAGATAATGCACGCACAAC 59.410 38.462 0.00 0.00 0.00 3.32
4270 15896 6.367695 GGTATATAGATAATGCACGCACAACA 59.632 38.462 0.00 0.00 0.00 3.33
4271 15897 2.900122 AGATAATGCACGCACAACAC 57.100 45.000 0.00 0.00 0.00 3.32
4272 15898 2.150390 AGATAATGCACGCACAACACA 58.850 42.857 0.00 0.00 0.00 3.72
4278 15907 1.673400 TGCACGCACAACACAAATAGT 59.327 42.857 0.00 0.00 0.00 2.12
4282 15911 4.698276 CACGCACAACACAAATAGTACTC 58.302 43.478 0.00 0.00 0.00 2.59
4366 16113 3.243873 TGTGAAAGTTCTCGAGATGCAGT 60.244 43.478 17.44 1.01 0.00 4.40
4444 16191 1.933041 CATAGCGGTGTCGACGTCG 60.933 63.158 31.30 31.30 39.00 5.12
4468 16215 3.155167 ATCGGGGCGGTCTTCCTC 61.155 66.667 0.00 0.00 0.00 3.71
4533 16282 0.179067 GACAACGACAGGGTGGTGAA 60.179 55.000 0.00 0.00 0.00 3.18
4579 16328 1.676529 CTTGCAGCATCCATCTTCCTG 59.323 52.381 0.00 0.00 0.00 3.86
4648 16400 7.504924 TCAGTTACCAAATTAAACCAGTGAG 57.495 36.000 0.00 0.00 0.00 3.51
4824 16598 7.068839 TGGTAAGAGCAAAACCAAATCAACTTA 59.931 33.333 0.00 0.00 40.28 2.24
4978 16796 0.770499 TGGGAGAATCAGGTGTGCAA 59.230 50.000 0.00 0.00 36.25 4.08
5007 16826 7.197071 ACACTAATATCACTCGATCTCAGTC 57.803 40.000 0.00 0.00 32.73 3.51
5009 16828 7.500892 ACACTAATATCACTCGATCTCAGTCTT 59.499 37.037 0.00 0.00 32.73 3.01
5011 16830 8.564574 ACTAATATCACTCGATCTCAGTCTTTC 58.435 37.037 0.00 0.00 32.73 2.62
5056 16900 6.098017 TCGATCATAGCTGAGCATATCTTTG 58.902 40.000 7.39 0.00 37.67 2.77
5135 16982 2.828480 GAAGTGGGGAGGAAGCAGCC 62.828 65.000 0.00 0.00 0.00 4.85
5139 16986 1.000866 GGGGAGGAAGCAGCCAAAT 59.999 57.895 0.00 0.00 0.00 2.32
5168 17015 3.345808 CCACACCAACGGCGACAG 61.346 66.667 16.62 3.23 0.00 3.51
5314 17194 2.778928 CGTTTCGTTTCGTTTGATTGCA 59.221 40.909 0.00 0.00 0.00 4.08
5317 17197 1.671328 TCGTTTCGTTTGATTGCACCA 59.329 42.857 0.00 0.00 0.00 4.17
5368 17248 1.407712 GGCTAGGGCAACGAATTGGTA 60.408 52.381 0.00 0.00 40.87 3.25
5371 17251 2.799126 AGGGCAACGAATTGGTATCA 57.201 45.000 0.00 0.00 36.23 2.15
5372 17252 2.365582 AGGGCAACGAATTGGTATCAC 58.634 47.619 0.00 0.00 36.23 3.06
5377 17257 5.067283 GGGCAACGAATTGGTATCACTTTAT 59.933 40.000 0.00 0.00 36.23 1.40
5408 17295 9.757227 TTTTTGTAAATCAGTATCAAGTTTGGG 57.243 29.630 0.00 0.00 0.00 4.12
5410 17297 6.548321 TGTAAATCAGTATCAAGTTTGGGGT 58.452 36.000 0.00 0.00 0.00 4.95
5445 17332 4.693566 AATCGAGCTGATCGGTGTTTAAAA 59.306 37.500 15.80 0.00 46.43 1.52
5459 17346 7.601886 TCGGTGTTTAAAACGTATTTGATAGGA 59.398 33.333 0.00 0.00 0.00 2.94
5473 17360 2.314549 TGATAGGAAAACAGGGGCCAAT 59.685 45.455 4.39 0.00 0.00 3.16
5506 17393 7.595311 TTTCTTTTGCAGAAAACTCCTTTTC 57.405 32.000 0.00 0.00 46.68 2.29
5536 17423 0.893727 ATCACACAAAAGCCCCCGTC 60.894 55.000 0.00 0.00 0.00 4.79
5539 17429 0.036306 ACACAAAAGCCCCCGTCTAG 59.964 55.000 0.00 0.00 0.00 2.43
5567 17457 7.422878 AAAAGACTACCGTGAGATTTCTTTC 57.577 36.000 0.00 0.00 32.10 2.62
5571 17461 6.647067 AGACTACCGTGAGATTTCTTTCTTTG 59.353 38.462 0.00 0.00 0.00 2.77
5572 17462 6.522054 ACTACCGTGAGATTTCTTTCTTTGA 58.478 36.000 0.00 0.00 0.00 2.69
5573 17463 5.674933 ACCGTGAGATTTCTTTCTTTGAC 57.325 39.130 0.00 0.00 0.00 3.18
5574 17464 5.368989 ACCGTGAGATTTCTTTCTTTGACT 58.631 37.500 0.00 0.00 0.00 3.41
5575 17465 6.522054 ACCGTGAGATTTCTTTCTTTGACTA 58.478 36.000 0.00 0.00 0.00 2.59
5576 17466 6.647067 ACCGTGAGATTTCTTTCTTTGACTAG 59.353 38.462 0.00 0.00 0.00 2.57
5577 17467 6.401581 CCGTGAGATTTCTTTCTTTGACTAGC 60.402 42.308 0.00 0.00 0.00 3.42
5578 17468 6.146184 CGTGAGATTTCTTTCTTTGACTAGCA 59.854 38.462 0.00 0.00 0.00 3.49
5579 17469 7.307396 CGTGAGATTTCTTTCTTTGACTAGCAA 60.307 37.037 0.00 0.00 33.88 3.91
5580 17470 8.510505 GTGAGATTTCTTTCTTTGACTAGCAAT 58.489 33.333 0.00 0.00 36.15 3.56
5581 17471 8.509690 TGAGATTTCTTTCTTTGACTAGCAATG 58.490 33.333 0.00 0.00 36.15 2.82
5582 17472 8.401490 AGATTTCTTTCTTTGACTAGCAATGT 57.599 30.769 0.00 0.00 36.15 2.71
5583 17473 8.295288 AGATTTCTTTCTTTGACTAGCAATGTG 58.705 33.333 0.00 0.00 36.15 3.21
5584 17474 5.362556 TCTTTCTTTGACTAGCAATGTGC 57.637 39.130 0.00 0.00 45.46 4.57
5585 17475 4.216257 TCTTTCTTTGACTAGCAATGTGCC 59.784 41.667 0.00 0.00 46.52 5.01
5586 17476 2.436417 TCTTTGACTAGCAATGTGCCC 58.564 47.619 0.00 0.00 46.52 5.36
5587 17477 1.131126 CTTTGACTAGCAATGTGCCCG 59.869 52.381 0.00 0.00 46.52 6.13
5588 17478 0.036164 TTGACTAGCAATGTGCCCGT 59.964 50.000 0.00 0.00 46.52 5.28
5589 17479 0.673333 TGACTAGCAATGTGCCCGTG 60.673 55.000 0.00 0.00 46.52 4.94
5590 17480 1.982073 GACTAGCAATGTGCCCGTGC 61.982 60.000 0.00 0.00 46.52 5.34
5591 17481 3.099619 CTAGCAATGTGCCCGTGCG 62.100 63.158 0.00 0.00 46.52 5.34
5592 17482 3.892740 TAGCAATGTGCCCGTGCGT 62.893 57.895 0.00 0.00 46.52 5.24
5593 17483 4.341502 GCAATGTGCCCGTGCGTT 62.342 61.111 0.00 0.00 41.78 4.84
5594 17484 2.428902 CAATGTGCCCGTGCGTTG 60.429 61.111 0.00 0.00 41.78 4.10
5595 17485 4.341502 AATGTGCCCGTGCGTTGC 62.342 61.111 0.00 0.00 41.78 4.17
5609 17499 2.112029 GTTGCAACGGACCCAAAGT 58.888 52.632 14.90 0.00 0.00 2.66
5610 17500 0.248866 GTTGCAACGGACCCAAAGTG 60.249 55.000 14.90 0.00 0.00 3.16
5611 17501 1.388065 TTGCAACGGACCCAAAGTGG 61.388 55.000 0.00 0.00 37.25 4.00
5612 17502 1.527380 GCAACGGACCCAAAGTGGA 60.527 57.895 0.00 0.00 40.96 4.02
5613 17503 1.104577 GCAACGGACCCAAAGTGGAA 61.105 55.000 0.00 0.00 40.96 3.53
5614 17504 1.616159 CAACGGACCCAAAGTGGAAT 58.384 50.000 0.00 0.00 40.96 3.01
5615 17505 2.785562 CAACGGACCCAAAGTGGAATA 58.214 47.619 0.00 0.00 40.96 1.75
5616 17506 3.150767 CAACGGACCCAAAGTGGAATAA 58.849 45.455 0.00 0.00 40.96 1.40
5617 17507 3.732048 ACGGACCCAAAGTGGAATAAT 57.268 42.857 0.00 0.00 40.96 1.28
5618 17508 3.352648 ACGGACCCAAAGTGGAATAATG 58.647 45.455 0.00 0.00 40.96 1.90
5619 17509 3.245122 ACGGACCCAAAGTGGAATAATGT 60.245 43.478 0.00 0.00 40.96 2.71
5620 17510 3.761752 CGGACCCAAAGTGGAATAATGTT 59.238 43.478 0.00 0.00 40.96 2.71
5621 17511 4.219725 CGGACCCAAAGTGGAATAATGTTT 59.780 41.667 0.00 0.00 40.96 2.83
5622 17512 5.478407 GGACCCAAAGTGGAATAATGTTTG 58.522 41.667 0.00 0.00 40.96 2.93
5623 17513 5.011635 GGACCCAAAGTGGAATAATGTTTGT 59.988 40.000 0.00 0.00 40.96 2.83
5624 17514 6.463755 GGACCCAAAGTGGAATAATGTTTGTT 60.464 38.462 0.00 0.00 40.96 2.83
5625 17515 6.521162 ACCCAAAGTGGAATAATGTTTGTTC 58.479 36.000 0.00 0.00 40.96 3.18
5626 17516 6.098982 ACCCAAAGTGGAATAATGTTTGTTCA 59.901 34.615 0.00 0.00 40.96 3.18
5627 17517 6.423604 CCCAAAGTGGAATAATGTTTGTTCAC 59.576 38.462 0.00 0.00 40.96 3.18
5628 17518 6.983307 CCAAAGTGGAATAATGTTTGTTCACA 59.017 34.615 0.00 0.00 40.96 3.58
5629 17519 7.493971 CCAAAGTGGAATAATGTTTGTTCACAA 59.506 33.333 0.00 0.00 40.96 3.33
5630 17520 8.877779 CAAAGTGGAATAATGTTTGTTCACAAA 58.122 29.630 0.79 0.79 42.90 2.83
5644 17534 7.715265 TTGTTCACAAACTTAAAAGCAAACA 57.285 28.000 0.00 0.00 36.30 2.83
5645 17535 7.111353 TGTTCACAAACTTAAAAGCAAACAC 57.889 32.000 0.00 0.00 36.30 3.32
5646 17536 6.926272 TGTTCACAAACTTAAAAGCAAACACT 59.074 30.769 0.00 0.00 36.30 3.55
5647 17537 7.115663 TGTTCACAAACTTAAAAGCAAACACTC 59.884 33.333 0.00 0.00 36.30 3.51
5648 17538 6.919721 TCACAAACTTAAAAGCAAACACTCT 58.080 32.000 0.00 0.00 0.00 3.24
5649 17539 7.375053 TCACAAACTTAAAAGCAAACACTCTT 58.625 30.769 0.00 0.00 0.00 2.85
5650 17540 7.328249 TCACAAACTTAAAAGCAAACACTCTTG 59.672 33.333 0.00 0.00 0.00 3.02
5651 17541 7.116233 CACAAACTTAAAAGCAAACACTCTTGT 59.884 33.333 0.00 0.00 37.67 3.16
5711 17601 9.508567 GTTTCACTCAAAATATATTTCTCAGCC 57.491 33.333 11.08 0.00 0.00 4.85
5712 17602 9.466497 TTTCACTCAAAATATATTTCTCAGCCT 57.534 29.630 11.08 0.00 0.00 4.58
5713 17603 8.442632 TCACTCAAAATATATTTCTCAGCCTG 57.557 34.615 11.08 4.62 0.00 4.85
5714 17604 8.049117 TCACTCAAAATATATTTCTCAGCCTGT 58.951 33.333 11.08 1.01 0.00 4.00
5715 17605 8.680903 CACTCAAAATATATTTCTCAGCCTGTT 58.319 33.333 11.08 0.00 0.00 3.16
5716 17606 9.247861 ACTCAAAATATATTTCTCAGCCTGTTT 57.752 29.630 11.08 0.00 0.00 2.83
5718 17608 9.859427 TCAAAATATATTTCTCAGCCTGTTTTG 57.141 29.630 11.08 2.76 35.37 2.44
5719 17609 9.859427 CAAAATATATTTCTCAGCCTGTTTTGA 57.141 29.630 11.08 0.00 35.82 2.69
5722 17612 8.985315 ATATATTTCTCAGCCTGTTTTGATGA 57.015 30.769 0.00 0.00 0.00 2.92
5723 17613 5.640189 ATTTCTCAGCCTGTTTTGATGAG 57.360 39.130 0.00 0.00 38.97 2.90
5724 17614 3.063510 TCTCAGCCTGTTTTGATGAGG 57.936 47.619 5.78 0.00 38.32 3.86
5727 17617 1.508088 GCCTGTTTTGATGAGGCGG 59.492 57.895 0.00 0.00 42.84 6.13
5728 17618 1.937546 GCCTGTTTTGATGAGGCGGG 61.938 60.000 0.00 0.00 42.84 6.13
5729 17619 1.315257 CCTGTTTTGATGAGGCGGGG 61.315 60.000 0.00 0.00 0.00 5.73
5730 17620 0.322456 CTGTTTTGATGAGGCGGGGA 60.322 55.000 0.00 0.00 0.00 4.81
5731 17621 0.322456 TGTTTTGATGAGGCGGGGAG 60.322 55.000 0.00 0.00 0.00 4.30
5732 17622 1.032114 GTTTTGATGAGGCGGGGAGG 61.032 60.000 0.00 0.00 0.00 4.30
5733 17623 2.210144 TTTTGATGAGGCGGGGAGGG 62.210 60.000 0.00 0.00 0.00 4.30
5734 17624 3.634157 TTGATGAGGCGGGGAGGGA 62.634 63.158 0.00 0.00 0.00 4.20
5735 17625 2.527875 GATGAGGCGGGGAGGGAT 60.528 66.667 0.00 0.00 0.00 3.85
5736 17626 2.851102 ATGAGGCGGGGAGGGATG 60.851 66.667 0.00 0.00 0.00 3.51
5737 17627 3.721172 ATGAGGCGGGGAGGGATGT 62.721 63.158 0.00 0.00 0.00 3.06
5738 17628 3.866582 GAGGCGGGGAGGGATGTG 61.867 72.222 0.00 0.00 0.00 3.21
5741 17631 4.115199 GCGGGGAGGGATGTGCTT 62.115 66.667 0.00 0.00 0.00 3.91
5742 17632 2.124570 CGGGGAGGGATGTGCTTG 60.125 66.667 0.00 0.00 0.00 4.01
5743 17633 2.440980 GGGGAGGGATGTGCTTGC 60.441 66.667 0.00 0.00 0.00 4.01
5744 17634 2.679716 GGGAGGGATGTGCTTGCT 59.320 61.111 0.00 0.00 0.00 3.91
5745 17635 1.000396 GGGAGGGATGTGCTTGCTT 60.000 57.895 0.00 0.00 0.00 3.91
5746 17636 0.613012 GGGAGGGATGTGCTTGCTTT 60.613 55.000 0.00 0.00 0.00 3.51
5747 17637 0.813821 GGAGGGATGTGCTTGCTTTC 59.186 55.000 0.00 0.00 0.00 2.62
5748 17638 1.538047 GAGGGATGTGCTTGCTTTCA 58.462 50.000 0.00 0.00 0.00 2.69
5749 17639 1.888512 GAGGGATGTGCTTGCTTTCAA 59.111 47.619 0.00 0.00 0.00 2.69
5764 17654 7.790782 TTGCTTTCAAGATAATAAGGGGTTT 57.209 32.000 0.00 0.00 0.00 3.27
5765 17655 7.790782 TGCTTTCAAGATAATAAGGGGTTTT 57.209 32.000 0.00 0.00 0.00 2.43
5766 17656 7.836842 TGCTTTCAAGATAATAAGGGGTTTTC 58.163 34.615 0.00 0.00 0.00 2.29
5767 17657 7.673926 TGCTTTCAAGATAATAAGGGGTTTTCT 59.326 33.333 0.00 0.00 0.00 2.52
5768 17658 7.976175 GCTTTCAAGATAATAAGGGGTTTTCTG 59.024 37.037 0.00 0.00 0.00 3.02
5769 17659 7.404671 TTCAAGATAATAAGGGGTTTTCTGC 57.595 36.000 0.00 0.00 0.00 4.26
5770 17660 6.489603 TCAAGATAATAAGGGGTTTTCTGCA 58.510 36.000 0.00 0.00 0.00 4.41
5771 17661 6.951198 TCAAGATAATAAGGGGTTTTCTGCAA 59.049 34.615 0.00 0.00 0.00 4.08
5772 17662 7.453126 TCAAGATAATAAGGGGTTTTCTGCAAA 59.547 33.333 0.00 0.00 0.00 3.68
5773 17663 7.978099 AGATAATAAGGGGTTTTCTGCAAAT 57.022 32.000 0.00 0.00 0.00 2.32
5774 17664 8.379428 AGATAATAAGGGGTTTTCTGCAAATT 57.621 30.769 0.00 0.00 0.00 1.82
5775 17665 8.260114 AGATAATAAGGGGTTTTCTGCAAATTG 58.740 33.333 0.00 0.00 0.00 2.32
5776 17666 3.490439 AAGGGGTTTTCTGCAAATTGG 57.510 42.857 0.00 0.00 0.00 3.16
5777 17667 2.688477 AGGGGTTTTCTGCAAATTGGA 58.312 42.857 0.00 0.00 0.00 3.53
5778 17668 2.634453 AGGGGTTTTCTGCAAATTGGAG 59.366 45.455 8.26 8.26 37.15 3.86
5779 17669 2.416747 GGGTTTTCTGCAAATTGGAGC 58.583 47.619 9.74 0.00 35.65 4.70
5780 17670 2.224257 GGGTTTTCTGCAAATTGGAGCA 60.224 45.455 9.74 0.00 35.65 4.26
5787 17677 2.867624 TGCAAATTGGAGCAGAGAAGT 58.132 42.857 0.00 0.00 35.51 3.01
5788 17678 2.555325 TGCAAATTGGAGCAGAGAAGTG 59.445 45.455 0.00 0.00 35.51 3.16
5789 17679 2.816087 GCAAATTGGAGCAGAGAAGTGA 59.184 45.455 0.00 0.00 0.00 3.41
5790 17680 3.119919 GCAAATTGGAGCAGAGAAGTGAG 60.120 47.826 0.00 0.00 0.00 3.51
5791 17681 2.399916 ATTGGAGCAGAGAAGTGAGC 57.600 50.000 0.00 0.00 0.00 4.26
5792 17682 1.346062 TTGGAGCAGAGAAGTGAGCT 58.654 50.000 0.00 0.00 40.60 4.09
5793 17683 2.222227 TGGAGCAGAGAAGTGAGCTA 57.778 50.000 0.00 0.00 37.48 3.32
5794 17684 2.744760 TGGAGCAGAGAAGTGAGCTAT 58.255 47.619 0.00 0.00 37.48 2.97
5795 17685 3.102972 TGGAGCAGAGAAGTGAGCTATT 58.897 45.455 0.00 0.00 37.48 1.73
5796 17686 3.118847 TGGAGCAGAGAAGTGAGCTATTG 60.119 47.826 0.00 0.00 37.48 1.90
5797 17687 3.118811 GGAGCAGAGAAGTGAGCTATTGT 60.119 47.826 0.00 0.00 37.48 2.71
5798 17688 4.502962 GAGCAGAGAAGTGAGCTATTGTT 58.497 43.478 0.00 0.00 37.48 2.83
5799 17689 4.252073 AGCAGAGAAGTGAGCTATTGTTG 58.748 43.478 0.00 0.00 35.19 3.33
5800 17690 3.181512 GCAGAGAAGTGAGCTATTGTTGC 60.182 47.826 0.00 0.00 0.00 4.17
5801 17691 3.999001 CAGAGAAGTGAGCTATTGTTGCA 59.001 43.478 0.00 0.00 0.00 4.08
5802 17692 4.453478 CAGAGAAGTGAGCTATTGTTGCAA 59.547 41.667 0.00 0.00 0.00 4.08
5803 17693 5.049198 CAGAGAAGTGAGCTATTGTTGCAAA 60.049 40.000 0.00 0.00 0.00 3.68
5804 17694 5.532406 AGAGAAGTGAGCTATTGTTGCAAAA 59.468 36.000 0.00 0.00 0.00 2.44
5805 17695 6.039717 AGAGAAGTGAGCTATTGTTGCAAAAA 59.960 34.615 4.10 4.10 0.00 1.94
5806 17696 6.752168 AGAAGTGAGCTATTGTTGCAAAAAT 58.248 32.000 18.63 18.63 0.00 1.82
5807 17697 6.643770 AGAAGTGAGCTATTGTTGCAAAAATG 59.356 34.615 22.67 14.07 0.00 2.32
5808 17698 4.687483 AGTGAGCTATTGTTGCAAAAATGC 59.313 37.500 22.67 21.27 0.00 3.56
5809 17699 3.995705 TGAGCTATTGTTGCAAAAATGCC 59.004 39.130 22.67 13.67 0.00 4.40
5810 17700 3.995705 GAGCTATTGTTGCAAAAATGCCA 59.004 39.130 22.67 4.33 0.00 4.92
5811 17701 3.747529 AGCTATTGTTGCAAAAATGCCAC 59.252 39.130 22.67 10.36 0.00 5.01
5812 17702 3.497640 GCTATTGTTGCAAAAATGCCACA 59.502 39.130 22.67 2.22 38.43 4.17
5814 17704 3.754188 TTGTTGCAAAAATGCCACAAC 57.246 38.095 14.17 6.10 42.77 3.32
5815 17705 2.983229 TGTTGCAAAAATGCCACAACT 58.017 38.095 0.00 0.00 40.88 3.16
5816 17706 3.341823 TGTTGCAAAAATGCCACAACTT 58.658 36.364 0.00 0.00 40.88 2.66
5817 17707 4.507710 TGTTGCAAAAATGCCACAACTTA 58.492 34.783 0.00 0.00 40.88 2.24
5818 17708 4.331168 TGTTGCAAAAATGCCACAACTTAC 59.669 37.500 0.00 0.00 40.88 2.34
5819 17709 3.462021 TGCAAAAATGCCACAACTTACC 58.538 40.909 0.00 0.00 0.00 2.85
5820 17710 3.133721 TGCAAAAATGCCACAACTTACCT 59.866 39.130 0.00 0.00 0.00 3.08
5821 17711 3.740832 GCAAAAATGCCACAACTTACCTC 59.259 43.478 0.00 0.00 0.00 3.85
5822 17712 3.915437 AAAATGCCACAACTTACCTCG 57.085 42.857 0.00 0.00 0.00 4.63
5823 17713 1.165270 AATGCCACAACTTACCTCGC 58.835 50.000 0.00 0.00 0.00 5.03
5824 17714 0.036164 ATGCCACAACTTACCTCGCA 59.964 50.000 0.00 0.00 0.00 5.10
5825 17715 0.602638 TGCCACAACTTACCTCGCAG 60.603 55.000 0.00 0.00 0.00 5.18
5826 17716 1.912371 GCCACAACTTACCTCGCAGC 61.912 60.000 0.00 0.00 0.00 5.25
5827 17717 1.298859 CCACAACTTACCTCGCAGCC 61.299 60.000 0.00 0.00 0.00 4.85
5828 17718 1.374252 ACAACTTACCTCGCAGCCG 60.374 57.895 0.00 0.00 0.00 5.52
5829 17719 1.374252 CAACTTACCTCGCAGCCGT 60.374 57.895 0.00 0.00 35.54 5.68
5830 17720 0.949105 CAACTTACCTCGCAGCCGTT 60.949 55.000 0.00 0.00 35.54 4.44
5831 17721 0.604578 AACTTACCTCGCAGCCGTTA 59.395 50.000 0.00 0.00 35.54 3.18
5832 17722 0.172803 ACTTACCTCGCAGCCGTTAG 59.827 55.000 0.00 0.00 35.54 2.34
5833 17723 0.454600 CTTACCTCGCAGCCGTTAGA 59.545 55.000 0.00 0.00 35.54 2.10
5834 17724 1.067212 CTTACCTCGCAGCCGTTAGAT 59.933 52.381 0.00 0.00 35.54 1.98
5835 17725 0.384309 TACCTCGCAGCCGTTAGATG 59.616 55.000 0.00 0.00 35.54 2.90
5836 17726 2.240500 CCTCGCAGCCGTTAGATGC 61.241 63.158 0.00 0.00 36.60 3.91
5837 17727 1.519234 CTCGCAGCCGTTAGATGCA 60.519 57.895 3.68 0.00 39.97 3.96
5838 17728 1.485838 CTCGCAGCCGTTAGATGCAG 61.486 60.000 3.68 0.00 39.97 4.41
5839 17729 1.519234 CGCAGCCGTTAGATGCAGA 60.519 57.895 3.68 0.00 39.97 4.26
5840 17730 0.877649 CGCAGCCGTTAGATGCAGAT 60.878 55.000 3.68 0.00 39.97 2.90
5841 17731 0.864455 GCAGCCGTTAGATGCAGATC 59.136 55.000 0.00 0.00 39.75 2.75
5842 17732 1.539929 GCAGCCGTTAGATGCAGATCT 60.540 52.381 0.00 0.00 42.03 2.75
5843 17733 2.288457 GCAGCCGTTAGATGCAGATCTA 60.288 50.000 0.00 0.00 39.76 1.98
5844 17734 3.800261 GCAGCCGTTAGATGCAGATCTAA 60.800 47.826 5.80 5.80 45.23 2.10
5857 17747 9.788889 AGATGCAGATCTAATGATTACAAATGA 57.211 29.630 0.00 0.00 37.15 2.57
5858 17748 9.823098 GATGCAGATCTAATGATTACAAATGAC 57.177 33.333 0.00 0.00 32.19 3.06
5859 17749 7.854534 TGCAGATCTAATGATTACAAATGACG 58.145 34.615 0.00 0.00 32.19 4.35
5860 17750 7.710475 TGCAGATCTAATGATTACAAATGACGA 59.290 33.333 0.00 0.00 32.19 4.20
5861 17751 8.551205 GCAGATCTAATGATTACAAATGACGAA 58.449 33.333 0.00 0.00 32.19 3.85
5866 17756 9.377312 TCTAATGATTACAAATGACGAATGACA 57.623 29.630 0.00 0.00 0.00 3.58
5867 17757 9.642312 CTAATGATTACAAATGACGAATGACAG 57.358 33.333 0.00 0.00 0.00 3.51
5868 17758 7.848223 ATGATTACAAATGACGAATGACAGA 57.152 32.000 0.00 0.00 0.00 3.41
5869 17759 7.848223 TGATTACAAATGACGAATGACAGAT 57.152 32.000 0.00 0.00 0.00 2.90
5870 17760 8.940768 TGATTACAAATGACGAATGACAGATA 57.059 30.769 0.00 0.00 0.00 1.98
5871 17761 8.817100 TGATTACAAATGACGAATGACAGATAC 58.183 33.333 0.00 0.00 0.00 2.24
5872 17762 8.716646 ATTACAAATGACGAATGACAGATACA 57.283 30.769 0.00 0.00 0.00 2.29
5873 17763 8.716646 TTACAAATGACGAATGACAGATACAT 57.283 30.769 0.00 0.00 0.00 2.29
5874 17764 7.239166 ACAAATGACGAATGACAGATACATC 57.761 36.000 0.00 0.00 0.00 3.06
5875 17765 6.818142 ACAAATGACGAATGACAGATACATCA 59.182 34.615 0.00 0.00 0.00 3.07
5876 17766 7.496920 ACAAATGACGAATGACAGATACATCAT 59.503 33.333 0.00 0.00 37.14 2.45
5877 17767 7.649370 AATGACGAATGACAGATACATCATC 57.351 36.000 0.00 0.00 34.41 2.92
5878 17768 6.147864 TGACGAATGACAGATACATCATCA 57.852 37.500 0.00 0.00 34.41 3.07
5879 17769 6.752168 TGACGAATGACAGATACATCATCAT 58.248 36.000 0.00 4.13 36.83 2.45
5880 17770 6.865205 TGACGAATGACAGATACATCATCATC 59.135 38.462 8.57 1.31 35.27 2.92
5881 17771 6.752168 ACGAATGACAGATACATCATCATCA 58.248 36.000 8.57 0.00 35.27 3.07
5882 17772 7.384477 ACGAATGACAGATACATCATCATCAT 58.616 34.615 8.57 0.00 40.68 2.45
5883 17773 7.544915 ACGAATGACAGATACATCATCATCATC 59.455 37.037 8.57 4.81 39.24 2.92
5884 17774 7.544566 CGAATGACAGATACATCATCATCATCA 59.455 37.037 8.57 0.00 39.24 3.07
5885 17775 8.549338 AATGACAGATACATCATCATCATCAC 57.451 34.615 8.57 0.00 39.24 3.06
5886 17776 7.299246 TGACAGATACATCATCATCATCACT 57.701 36.000 0.00 0.00 35.96 3.41
5887 17777 7.152645 TGACAGATACATCATCATCATCACTG 58.847 38.462 0.00 0.00 35.96 3.66
5888 17778 7.014905 TGACAGATACATCATCATCATCACTGA 59.985 37.037 0.00 0.00 35.96 3.41
5889 17779 7.379750 ACAGATACATCATCATCATCACTGAG 58.620 38.462 0.00 0.00 35.96 3.35
5890 17780 7.015389 ACAGATACATCATCATCATCACTGAGT 59.985 37.037 0.00 0.00 35.96 3.41
5891 17781 7.542824 CAGATACATCATCATCATCACTGAGTC 59.457 40.741 0.00 0.00 35.96 3.36
5892 17782 5.873146 ACATCATCATCATCACTGAGTCT 57.127 39.130 0.00 0.00 34.12 3.24
5893 17783 6.236558 ACATCATCATCATCACTGAGTCTT 57.763 37.500 0.00 0.00 34.12 3.01
5894 17784 6.651086 ACATCATCATCATCACTGAGTCTTT 58.349 36.000 0.00 0.00 34.12 2.52
5895 17785 7.110810 ACATCATCATCATCACTGAGTCTTTT 58.889 34.615 0.00 0.00 34.12 2.27
5896 17786 8.262933 ACATCATCATCATCACTGAGTCTTTTA 58.737 33.333 0.00 0.00 34.12 1.52
5897 17787 9.274206 CATCATCATCATCACTGAGTCTTTTAT 57.726 33.333 0.00 0.00 34.12 1.40
5899 17789 9.978044 TCATCATCATCACTGAGTCTTTTATAG 57.022 33.333 0.00 0.00 34.12 1.31
5900 17790 9.205719 CATCATCATCACTGAGTCTTTTATAGG 57.794 37.037 0.00 0.00 34.12 2.57
5901 17791 8.539117 TCATCATCACTGAGTCTTTTATAGGA 57.461 34.615 0.00 0.00 34.12 2.94
5902 17792 8.637099 TCATCATCACTGAGTCTTTTATAGGAG 58.363 37.037 0.00 0.00 34.12 3.69
5903 17793 7.962995 TCATCACTGAGTCTTTTATAGGAGT 57.037 36.000 0.00 0.00 0.00 3.85
5904 17794 9.647918 ATCATCACTGAGTCTTTTATAGGAGTA 57.352 33.333 0.00 0.00 34.12 2.59
5905 17795 9.126151 TCATCACTGAGTCTTTTATAGGAGTAG 57.874 37.037 0.00 0.00 0.00 2.57
5906 17796 9.126151 CATCACTGAGTCTTTTATAGGAGTAGA 57.874 37.037 0.00 0.00 0.00 2.59
5907 17797 9.875708 ATCACTGAGTCTTTTATAGGAGTAGAT 57.124 33.333 0.00 0.00 0.00 1.98
5968 17888 1.134670 ACTTAAGCTGGTCCTCGCATC 60.135 52.381 1.29 0.00 0.00 3.91
5969 17889 0.901827 TTAAGCTGGTCCTCGCATCA 59.098 50.000 6.52 0.00 0.00 3.07
5975 17895 1.227674 GGTCCTCGCATCATGGTCC 60.228 63.158 0.00 0.00 0.00 4.46
5982 17902 4.935495 CATCATGGTCCGGGCCCG 62.935 72.222 37.99 37.99 39.44 6.13
5989 17909 0.335705 TGGTCCGGGCCCGATATATA 59.664 55.000 45.44 22.33 42.83 0.86
6023 17952 2.238521 TGGGGCTGAGAAATGTGAAAC 58.761 47.619 0.00 0.00 37.35 2.78
6045 17974 0.535102 AAAGCGCTATTGGGGGATCG 60.535 55.000 12.05 0.00 0.00 3.69
6048 17977 1.228657 GCGCTATTGGGGGATCGAAC 61.229 60.000 0.00 0.00 0.00 3.95
6049 17978 0.105964 CGCTATTGGGGGATCGAACA 59.894 55.000 0.00 0.00 0.00 3.18
6054 17983 1.419720 TTGGGGGATCGAACACACCA 61.420 55.000 4.43 4.43 0.00 4.17
6065 17994 6.238211 GGATCGAACACACCATCTAAAATGAG 60.238 42.308 0.00 0.00 0.00 2.90
6072 18001 8.498054 ACACACCATCTAAAATGAGATACAAG 57.502 34.615 0.00 0.00 34.29 3.16
6135 18065 4.640855 CGTGCACGTGACCCGACT 62.641 66.667 30.50 0.00 40.70 4.18
6140 18070 1.545136 TGCACGTGACCCGACTTAATA 59.455 47.619 22.23 0.00 40.70 0.98
6154 18084 9.154847 ACCCGACTTAATACAAGTAAAATGTAC 57.845 33.333 0.00 0.00 36.19 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 5.299279 TGTGGAATGACTTTCTTGGAAACTC 59.701 40.000 1.55 0.00 34.56 3.01
96 97 8.862325 ACACACATTAATCAAGGATTTAGACA 57.138 30.769 0.00 0.00 33.95 3.41
109 110 6.785488 TGTCTCTGACAACACACATTAATC 57.215 37.500 0.00 0.00 39.78 1.75
116 117 2.212652 TGCATGTCTCTGACAACACAC 58.787 47.619 4.46 0.00 45.96 3.82
143 144 3.321111 CCTACGCCTTAGTATGTGTCCAT 59.679 47.826 0.00 0.00 34.97 3.41
197 209 1.619654 TTTCTTGAGCCATGGGTGTG 58.380 50.000 23.86 10.94 0.00 3.82
227 240 5.856156 TCCAAATTCTTGTACTTGTACCGA 58.144 37.500 8.25 3.04 0.00 4.69
258 271 7.390718 ACCTTTATTCTCACAACCATGTCTTAC 59.609 37.037 0.00 0.00 37.82 2.34
292 309 4.347000 TCTTATTTCTATTCACCCCCTCCG 59.653 45.833 0.00 0.00 0.00 4.63
317 334 7.515998 GCTCTTATTCAGAAATAGAACGACAGC 60.516 40.741 0.00 0.00 0.00 4.40
350 367 9.931210 GGAGTAACGGAAAAACATAATGATTAG 57.069 33.333 0.00 0.00 0.00 1.73
367 384 1.133598 TGTGATGCTACGGAGTAACGG 59.866 52.381 0.00 0.00 45.13 4.44
368 385 2.182825 GTGTGATGCTACGGAGTAACG 58.817 52.381 0.00 0.00 45.13 3.18
420 437 6.769512 TCCTGCTATTCTTGTACATATTCCC 58.230 40.000 0.00 0.00 0.00 3.97
422 439 8.286097 GCTTTCCTGCTATTCTTGTACATATTC 58.714 37.037 0.00 0.00 0.00 1.75
466 483 0.037326 CGTGTGTGTGGTGATAGCCT 60.037 55.000 0.00 0.00 0.00 4.58
475 492 0.598942 TCAATCGGTCGTGTGTGTGG 60.599 55.000 0.00 0.00 0.00 4.17
476 493 1.213491 TTCAATCGGTCGTGTGTGTG 58.787 50.000 0.00 0.00 0.00 3.82
477 494 1.942677 TTTCAATCGGTCGTGTGTGT 58.057 45.000 0.00 0.00 0.00 3.72
478 495 3.242608 ACTTTTTCAATCGGTCGTGTGTG 60.243 43.478 0.00 0.00 0.00 3.82
479 496 2.940410 ACTTTTTCAATCGGTCGTGTGT 59.060 40.909 0.00 0.00 0.00 3.72
533 550 9.985730 TCATTTATCCAAGGAATTTATCATTGC 57.014 29.630 0.00 0.00 45.99 3.56
548 565 7.840716 AGAGGTTTCCATCAATCATTTATCCAA 59.159 33.333 0.00 0.00 0.00 3.53
595 612 4.347453 CTTGGCGCCAACCAGTGC 62.347 66.667 37.30 2.12 41.82 4.40
623 640 0.106619 AGGTAGTAGGCGGGACTGAG 60.107 60.000 0.75 0.00 0.00 3.35
627 655 4.412796 AAATTTAGGTAGTAGGCGGGAC 57.587 45.455 0.00 0.00 0.00 4.46
678 706 4.873129 CGGCAGGTCGATCGGGTG 62.873 72.222 16.41 11.19 0.00 4.61
744 772 1.178276 CCTCGTACACAGCTCTCCTT 58.822 55.000 0.00 0.00 0.00 3.36
865 897 3.369451 GCTAGAGCTTGCTGTTTCTGTAC 59.631 47.826 0.00 0.00 38.21 2.90
883 927 0.529337 CCGACACATGCTCTGGCTAG 60.529 60.000 0.00 0.00 39.59 3.42
884 928 1.517361 CCGACACATGCTCTGGCTA 59.483 57.895 0.00 0.00 39.59 3.93
885 929 2.267006 CCGACACATGCTCTGGCT 59.733 61.111 0.00 0.00 39.59 4.75
886 930 3.503363 GCCGACACATGCTCTGGC 61.503 66.667 4.17 4.17 39.26 4.85
887 931 2.821366 GGCCGACACATGCTCTGG 60.821 66.667 0.00 0.00 0.00 3.86
888 932 3.190849 CGGCCGACACATGCTCTG 61.191 66.667 24.07 0.00 0.00 3.35
1029 1167 0.819259 GCCACAGCACCTTTGACTCA 60.819 55.000 0.00 0.00 39.53 3.41
1205 1343 0.037326 CTGCCTGCCTACGTTCTTCA 60.037 55.000 0.00 0.00 0.00 3.02
1224 1468 9.927668 AACAATATATAAGCATGTTAATTGGCC 57.072 29.630 0.00 0.00 32.81 5.36
1305 1549 5.641155 AGTTTAGCACAAAAGTAAGGGGAT 58.359 37.500 0.00 0.00 0.00 3.85
1464 3723 8.030106 CCCCTTCGTATTTTGTGCTAAATTTTA 58.970 33.333 0.00 0.00 0.00 1.52
1502 3761 2.079925 AGGTACTACGTTCGTCCTGAC 58.920 52.381 0.00 0.00 36.02 3.51
1647 3915 7.878036 ACCAAATACGCATAGTACAAAAACTT 58.122 30.769 0.00 0.00 38.29 2.66
1873 4146 2.919229 CAGCGATTCAAAGGCAATGAAC 59.081 45.455 7.06 2.42 39.43 3.18
1877 4150 3.081061 TGTACAGCGATTCAAAGGCAAT 58.919 40.909 0.00 0.00 0.00 3.56
1892 4165 7.040755 TGGTCCTGTTTTGTTTATCATGTACAG 60.041 37.037 0.33 0.00 33.22 2.74
1902 4175 5.446860 TGTATGGTGGTCCTGTTTTGTTTA 58.553 37.500 0.00 0.00 34.23 2.01
2047 4320 9.129209 TCAGATATCGTCATCATTTATCGTTTC 57.871 33.333 0.00 0.00 0.00 2.78
2192 4731 9.916360 TTCCTACATCTATGTCTCTACTGTTTA 57.084 33.333 0.00 0.00 41.97 2.01
2249 4818 4.096984 CACAGCCCTCATTTCAACCTATTC 59.903 45.833 0.00 0.00 0.00 1.75
2325 4896 5.718146 TGTGCAAAAAGAACAAACTCATGA 58.282 33.333 0.00 0.00 30.92 3.07
2462 5035 4.323409 GCCTCCATTGATGCCCTTTAAAAA 60.323 41.667 0.00 0.00 0.00 1.94
2465 5038 2.387757 GCCTCCATTGATGCCCTTTAA 58.612 47.619 0.00 0.00 0.00 1.52
2466 5039 1.411501 GGCCTCCATTGATGCCCTTTA 60.412 52.381 0.00 0.00 44.09 1.85
2530 5109 1.354101 TCGTTAATGGGTGGGTGACT 58.646 50.000 0.00 0.00 0.00 3.41
2541 5120 8.004344 GGTCGATTCAGTGATTTATCGTTAATG 58.996 37.037 19.81 0.00 40.40 1.90
2667 5260 8.867768 GTGTAACAACACCAAATGGTAGGATGT 61.868 40.741 4.46 2.69 41.77 3.06
2697 5290 7.351952 ACTACCACATGATAGTAGGTAAGACA 58.648 38.462 18.79 0.00 38.22 3.41
2781 5376 5.643379 AACCAACAAACATGTAGGCTATG 57.357 39.130 0.00 0.00 0.00 2.23
2926 6133 1.153107 CGCCATTGGATCAGCCTCA 60.153 57.895 6.95 0.00 37.63 3.86
3024 6240 1.331756 CTGACGATGGCCAATGCTAAC 59.668 52.381 10.96 0.00 37.74 2.34
3029 6245 2.251409 ATCTCTGACGATGGCCAATG 57.749 50.000 10.96 7.98 0.00 2.82
3030 6246 4.384056 CTTTATCTCTGACGATGGCCAAT 58.616 43.478 10.96 0.00 0.00 3.16
3041 6258 8.556589 TGTATTTCATTTCCCCTTTATCTCTGA 58.443 33.333 0.00 0.00 0.00 3.27
3108 10053 3.424962 GCGTGACAAAATTCCACTCTAGC 60.425 47.826 0.00 0.00 0.00 3.42
3138 10132 1.686355 TGTGGAAGGCGTGACAAAAT 58.314 45.000 0.00 0.00 0.00 1.82
3140 10134 2.224426 ACTATGTGGAAGGCGTGACAAA 60.224 45.455 0.00 0.00 0.00 2.83
3142 10136 0.973632 ACTATGTGGAAGGCGTGACA 59.026 50.000 0.00 0.00 0.00 3.58
3143 10137 2.953466 TACTATGTGGAAGGCGTGAC 57.047 50.000 0.00 0.00 0.00 3.67
3145 10139 3.179443 ACATACTATGTGGAAGGCGTG 57.821 47.619 0.58 0.00 43.01 5.34
3236 10873 6.849305 TCGAGAAAGAGTAAAATTTCAAACGC 59.151 34.615 0.00 0.00 37.78 4.84
3258 10976 2.005995 GCAACATATGCGTGCTCGA 58.994 52.632 19.71 0.00 46.87 4.04
3285 11003 2.586079 CATCACCTAGCGCGTGGG 60.586 66.667 22.04 17.73 0.00 4.61
3414 11134 2.896854 GCGCCGCAGATGATCCAA 60.897 61.111 3.15 0.00 0.00 3.53
3855 13042 3.769739 TGTACAAACCAGAGCATGACT 57.230 42.857 0.00 0.00 0.00 3.41
4067 15519 0.690762 GGTTGCAGGTTCCTCTGGTA 59.309 55.000 0.00 0.00 35.43 3.25
4069 15521 0.984230 TAGGTTGCAGGTTCCTCTGG 59.016 55.000 5.37 0.00 35.43 3.86
4071 15523 2.339769 AGTTAGGTTGCAGGTTCCTCT 58.660 47.619 5.37 0.00 33.34 3.69
4074 15526 2.683362 GCATAGTTAGGTTGCAGGTTCC 59.317 50.000 0.00 0.00 36.40 3.62
4180 15632 5.954335 AGCTGGTAATTGATGCTGTAAAAC 58.046 37.500 0.00 0.00 32.32 2.43
4266 15892 7.652300 TGTGCTAAGAGTACTATTTGTGTTG 57.348 36.000 8.25 0.00 31.77 3.33
4267 15893 8.671384 TTTGTGCTAAGAGTACTATTTGTGTT 57.329 30.769 8.25 0.00 31.77 3.32
4269 15895 8.774586 AGTTTTGTGCTAAGAGTACTATTTGTG 58.225 33.333 8.25 1.20 31.77 3.33
4270 15896 8.774586 CAGTTTTGTGCTAAGAGTACTATTTGT 58.225 33.333 8.25 0.00 31.77 2.83
4271 15897 7.746475 GCAGTTTTGTGCTAAGAGTACTATTTG 59.254 37.037 8.25 7.68 40.54 2.32
4272 15898 7.444183 TGCAGTTTTGTGCTAAGAGTACTATTT 59.556 33.333 8.25 2.81 44.32 1.40
4278 15907 5.007626 CAGTTGCAGTTTTGTGCTAAGAGTA 59.992 40.000 0.00 0.00 44.32 2.59
4282 15911 4.032703 ACAGTTGCAGTTTTGTGCTAAG 57.967 40.909 0.00 0.00 44.32 2.18
4366 16113 0.038892 GCTCGTTCGACACCCTAACA 60.039 55.000 0.00 0.00 0.00 2.41
4468 16215 1.811266 CCAGATGAGGAACACGGCG 60.811 63.158 4.80 4.80 0.00 6.46
4579 16328 0.242017 GCACAGGTTGGATGCTGTTC 59.758 55.000 0.00 0.00 36.40 3.18
4669 16443 2.949106 CCACACCTGCAAAGCGAG 59.051 61.111 0.00 0.00 0.00 5.03
4824 16598 9.205513 AGCAGGTTATGAATCCAGAAATATTTT 57.794 29.630 1.43 0.00 0.00 1.82
4833 16607 4.412796 TCAGAGCAGGTTATGAATCCAG 57.587 45.455 0.00 0.00 0.00 3.86
4839 16613 7.791029 TGTTGTATATTCAGAGCAGGTTATGA 58.209 34.615 0.00 0.00 0.00 2.15
4978 16796 9.945904 TGAGATCGAGTGATATTAGTGTAGTAT 57.054 33.333 0.00 0.00 34.09 2.12
5038 16882 9.618890 TCTTAAAACAAAGATATGCTCAGCTAT 57.381 29.630 0.00 0.00 30.54 2.97
5102 16946 3.783082 CCCCACTTCCTTATCCTCTCTTT 59.217 47.826 0.00 0.00 0.00 2.52
5156 17003 0.248907 ATATCGTCTGTCGCCGTTGG 60.249 55.000 0.00 0.00 39.67 3.77
5314 17194 8.491134 TGGTACTTATATGCAATTAACTCTGGT 58.509 33.333 0.00 0.00 0.00 4.00
5317 17197 9.899661 TTGTGGTACTTATATGCAATTAACTCT 57.100 29.630 0.00 0.00 0.00 3.24
5344 17224 1.858739 ATTCGTTGCCCTAGCCCCAA 61.859 55.000 0.00 0.00 38.69 4.12
5346 17226 1.076995 AATTCGTTGCCCTAGCCCC 60.077 57.895 0.00 0.00 38.69 5.80
5350 17230 3.560068 GTGATACCAATTCGTTGCCCTAG 59.440 47.826 0.00 0.00 0.00 3.02
5354 17234 4.434713 AAAGTGATACCAATTCGTTGCC 57.565 40.909 0.00 0.00 29.42 4.52
5388 17275 7.343357 CCTACCCCAAACTTGATACTGATTTA 58.657 38.462 0.00 0.00 0.00 1.40
5408 17295 1.664965 CGATTAGCTGCGGCCTACC 60.665 63.158 15.55 0.36 39.73 3.18
5410 17297 1.660355 CTCGATTAGCTGCGGCCTA 59.340 57.895 15.55 2.14 39.73 3.93
5431 17318 9.417284 CTATCAAATACGTTTTAAACACCGATC 57.583 33.333 8.61 0.00 0.00 3.69
5434 17321 7.741198 TCCTATCAAATACGTTTTAAACACCG 58.259 34.615 8.61 0.00 0.00 4.94
5435 17322 9.896263 TTTCCTATCAAATACGTTTTAAACACC 57.104 29.630 8.61 0.00 0.00 4.16
5445 17332 5.190677 CCCCTGTTTTCCTATCAAATACGT 58.809 41.667 0.00 0.00 0.00 3.57
5459 17346 2.450992 CCACATTGGCCCCTGTTTT 58.549 52.632 0.00 0.00 0.00 2.43
5473 17360 1.065401 CTGCAAAAGAAACTCGCCACA 59.935 47.619 0.00 0.00 0.00 4.17
5505 17392 9.267084 GGGCTTTTGTGTGATTAAATAAAAAGA 57.733 29.630 8.68 0.00 35.96 2.52
5506 17393 8.503196 GGGGCTTTTGTGTGATTAAATAAAAAG 58.497 33.333 0.00 0.00 36.63 2.27
5510 17397 5.336849 CGGGGGCTTTTGTGTGATTAAATAA 60.337 40.000 0.00 0.00 0.00 1.40
5548 17438 6.424207 GTCAAAGAAAGAAATCTCACGGTAGT 59.576 38.462 0.00 0.00 0.00 2.73
5551 17441 5.368989 AGTCAAAGAAAGAAATCTCACGGT 58.631 37.500 0.00 0.00 0.00 4.83
5553 17443 6.146184 TGCTAGTCAAAGAAAGAAATCTCACG 59.854 38.462 0.00 0.00 0.00 4.35
5556 17446 8.510505 ACATTGCTAGTCAAAGAAAGAAATCTC 58.489 33.333 8.45 0.00 38.34 2.75
5567 17457 1.131126 CGGGCACATTGCTAGTCAAAG 59.869 52.381 4.14 3.06 44.28 2.77
5571 17461 1.982073 GCACGGGCACATTGCTAGTC 61.982 60.000 3.77 0.00 44.28 2.59
5572 17462 2.040544 GCACGGGCACATTGCTAGT 61.041 57.895 3.77 0.00 44.28 2.57
5573 17463 2.793946 GCACGGGCACATTGCTAG 59.206 61.111 3.77 0.00 44.28 3.42
5574 17464 3.124270 CGCACGGGCACATTGCTA 61.124 61.111 11.77 0.00 44.28 3.49
5576 17466 4.341502 AACGCACGGGCACATTGC 62.342 61.111 11.77 0.00 44.08 3.56
5577 17467 2.428902 CAACGCACGGGCACATTG 60.429 61.111 11.77 7.23 41.24 2.82
5578 17468 4.341502 GCAACGCACGGGCACATT 62.342 61.111 11.77 0.00 41.24 2.71
5591 17481 0.248866 CACTTTGGGTCCGTTGCAAC 60.249 55.000 19.89 19.89 0.00 4.17
5592 17482 1.388065 CCACTTTGGGTCCGTTGCAA 61.388 55.000 0.00 0.00 32.67 4.08
5593 17483 1.826054 CCACTTTGGGTCCGTTGCA 60.826 57.895 0.00 0.00 32.67 4.08
5594 17484 1.104577 TTCCACTTTGGGTCCGTTGC 61.105 55.000 0.00 0.00 38.32 4.17
5595 17485 1.616159 ATTCCACTTTGGGTCCGTTG 58.384 50.000 0.00 0.00 38.32 4.10
5596 17486 3.512219 TTATTCCACTTTGGGTCCGTT 57.488 42.857 0.00 0.00 38.32 4.44
5597 17487 3.245122 ACATTATTCCACTTTGGGTCCGT 60.245 43.478 0.00 0.00 38.32 4.69
5598 17488 3.352648 ACATTATTCCACTTTGGGTCCG 58.647 45.455 0.00 0.00 38.32 4.79
5599 17489 5.011635 ACAAACATTATTCCACTTTGGGTCC 59.988 40.000 0.00 0.00 38.32 4.46
5600 17490 6.096673 ACAAACATTATTCCACTTTGGGTC 57.903 37.500 0.00 0.00 38.32 4.46
5601 17491 6.098982 TGAACAAACATTATTCCACTTTGGGT 59.901 34.615 0.00 0.00 38.32 4.51
5602 17492 6.423604 GTGAACAAACATTATTCCACTTTGGG 59.576 38.462 0.00 0.00 38.32 4.12
5603 17493 6.983307 TGTGAACAAACATTATTCCACTTTGG 59.017 34.615 0.00 0.00 39.43 3.28
5604 17494 8.417780 TTGTGAACAAACATTATTCCACTTTG 57.582 30.769 0.00 0.00 32.11 2.77
5619 17509 8.064814 GTGTTTGCTTTTAAGTTTGTGAACAAA 58.935 29.630 4.52 4.52 42.90 2.83
5620 17510 7.439655 AGTGTTTGCTTTTAAGTTTGTGAACAA 59.560 29.630 0.00 0.00 38.26 2.83
5621 17511 6.926272 AGTGTTTGCTTTTAAGTTTGTGAACA 59.074 30.769 0.00 0.00 38.26 3.18
5622 17512 7.328493 AGAGTGTTTGCTTTTAAGTTTGTGAAC 59.672 33.333 0.00 0.00 35.97 3.18
5623 17513 7.375053 AGAGTGTTTGCTTTTAAGTTTGTGAA 58.625 30.769 0.00 0.00 0.00 3.18
5624 17514 6.919721 AGAGTGTTTGCTTTTAAGTTTGTGA 58.080 32.000 0.00 0.00 0.00 3.58
5625 17515 7.116233 ACAAGAGTGTTTGCTTTTAAGTTTGTG 59.884 33.333 0.00 0.00 32.58 3.33
5626 17516 7.151976 ACAAGAGTGTTTGCTTTTAAGTTTGT 58.848 30.769 0.00 0.00 32.58 2.83
5627 17517 7.581011 ACAAGAGTGTTTGCTTTTAAGTTTG 57.419 32.000 0.00 0.00 32.58 2.93
5685 17575 9.508567 GGCTGAGAAATATATTTTGAGTGAAAC 57.491 33.333 11.92 0.00 0.00 2.78
5686 17576 9.466497 AGGCTGAGAAATATATTTTGAGTGAAA 57.534 29.630 11.92 0.00 0.00 2.69
5687 17577 8.896744 CAGGCTGAGAAATATATTTTGAGTGAA 58.103 33.333 9.42 0.00 0.00 3.18
5688 17578 8.049117 ACAGGCTGAGAAATATATTTTGAGTGA 58.951 33.333 23.66 0.00 0.00 3.41
5689 17579 8.218338 ACAGGCTGAGAAATATATTTTGAGTG 57.782 34.615 23.66 6.68 0.00 3.51
5690 17580 8.814038 AACAGGCTGAGAAATATATTTTGAGT 57.186 30.769 23.66 0.00 0.00 3.41
5692 17582 9.859427 CAAAACAGGCTGAGAAATATATTTTGA 57.141 29.630 23.66 0.00 36.08 2.69
5693 17583 9.859427 TCAAAACAGGCTGAGAAATATATTTTG 57.141 29.630 23.66 21.06 35.60 2.44
5696 17586 9.412460 TCATCAAAACAGGCTGAGAAATATATT 57.588 29.630 23.66 0.00 0.00 1.28
5697 17587 8.985315 TCATCAAAACAGGCTGAGAAATATAT 57.015 30.769 23.66 1.29 0.00 0.86
5698 17588 7.500227 CCTCATCAAAACAGGCTGAGAAATATA 59.500 37.037 23.66 0.00 36.32 0.86
5699 17589 6.320672 CCTCATCAAAACAGGCTGAGAAATAT 59.679 38.462 23.66 4.44 36.32 1.28
5700 17590 5.649395 CCTCATCAAAACAGGCTGAGAAATA 59.351 40.000 23.66 2.02 36.32 1.40
5701 17591 4.461781 CCTCATCAAAACAGGCTGAGAAAT 59.538 41.667 23.66 4.99 36.32 2.17
5702 17592 3.822735 CCTCATCAAAACAGGCTGAGAAA 59.177 43.478 23.66 2.61 36.32 2.52
5703 17593 3.415212 CCTCATCAAAACAGGCTGAGAA 58.585 45.455 23.66 1.84 36.32 2.87
5704 17594 3.063510 CCTCATCAAAACAGGCTGAGA 57.936 47.619 23.66 13.21 36.32 3.27
5710 17600 1.315257 CCCCGCCTCATCAAAACAGG 61.315 60.000 0.00 0.00 0.00 4.00
5711 17601 0.322456 TCCCCGCCTCATCAAAACAG 60.322 55.000 0.00 0.00 0.00 3.16
5712 17602 0.322456 CTCCCCGCCTCATCAAAACA 60.322 55.000 0.00 0.00 0.00 2.83
5713 17603 1.032114 CCTCCCCGCCTCATCAAAAC 61.032 60.000 0.00 0.00 0.00 2.43
5714 17604 1.302949 CCTCCCCGCCTCATCAAAA 59.697 57.895 0.00 0.00 0.00 2.44
5715 17605 2.679342 CCCTCCCCGCCTCATCAAA 61.679 63.158 0.00 0.00 0.00 2.69
5716 17606 2.914734 ATCCCTCCCCGCCTCATCAA 62.915 60.000 0.00 0.00 0.00 2.57
5717 17607 3.410788 ATCCCTCCCCGCCTCATCA 62.411 63.158 0.00 0.00 0.00 3.07
5718 17608 2.527875 ATCCCTCCCCGCCTCATC 60.528 66.667 0.00 0.00 0.00 2.92
5719 17609 2.851102 CATCCCTCCCCGCCTCAT 60.851 66.667 0.00 0.00 0.00 2.90
5720 17610 4.414956 ACATCCCTCCCCGCCTCA 62.415 66.667 0.00 0.00 0.00 3.86
5721 17611 3.866582 CACATCCCTCCCCGCCTC 61.867 72.222 0.00 0.00 0.00 4.70
5724 17614 4.115199 AAGCACATCCCTCCCCGC 62.115 66.667 0.00 0.00 0.00 6.13
5725 17615 2.124570 CAAGCACATCCCTCCCCG 60.125 66.667 0.00 0.00 0.00 5.73
5726 17616 2.440980 GCAAGCACATCCCTCCCC 60.441 66.667 0.00 0.00 0.00 4.81
5727 17617 0.613012 AAAGCAAGCACATCCCTCCC 60.613 55.000 0.00 0.00 0.00 4.30
5728 17618 0.813821 GAAAGCAAGCACATCCCTCC 59.186 55.000 0.00 0.00 0.00 4.30
5729 17619 1.538047 TGAAAGCAAGCACATCCCTC 58.462 50.000 0.00 0.00 0.00 4.30
5730 17620 1.891150 CTTGAAAGCAAGCACATCCCT 59.109 47.619 0.00 0.00 44.41 4.20
5731 17621 2.358939 CTTGAAAGCAAGCACATCCC 57.641 50.000 0.00 0.00 44.41 3.85
5740 17630 7.790782 AAACCCCTTATTATCTTGAAAGCAA 57.209 32.000 0.00 0.00 0.00 3.91
5741 17631 7.673926 AGAAAACCCCTTATTATCTTGAAAGCA 59.326 33.333 0.00 0.00 0.00 3.91
5742 17632 7.976175 CAGAAAACCCCTTATTATCTTGAAAGC 59.024 37.037 0.00 0.00 0.00 3.51
5743 17633 7.976175 GCAGAAAACCCCTTATTATCTTGAAAG 59.024 37.037 0.00 0.00 0.00 2.62
5744 17634 7.453126 TGCAGAAAACCCCTTATTATCTTGAAA 59.547 33.333 0.00 0.00 0.00 2.69
5745 17635 6.951198 TGCAGAAAACCCCTTATTATCTTGAA 59.049 34.615 0.00 0.00 0.00 2.69
5746 17636 6.489603 TGCAGAAAACCCCTTATTATCTTGA 58.510 36.000 0.00 0.00 0.00 3.02
5747 17637 6.773976 TGCAGAAAACCCCTTATTATCTTG 57.226 37.500 0.00 0.00 0.00 3.02
5748 17638 7.790782 TTTGCAGAAAACCCCTTATTATCTT 57.209 32.000 0.00 0.00 0.00 2.40
5749 17639 7.978099 ATTTGCAGAAAACCCCTTATTATCT 57.022 32.000 0.00 0.00 0.00 1.98
5750 17640 7.495606 CCAATTTGCAGAAAACCCCTTATTATC 59.504 37.037 0.00 0.00 0.00 1.75
5751 17641 7.181845 TCCAATTTGCAGAAAACCCCTTATTAT 59.818 33.333 0.00 0.00 0.00 1.28
5752 17642 6.498651 TCCAATTTGCAGAAAACCCCTTATTA 59.501 34.615 0.00 0.00 0.00 0.98
5753 17643 5.309282 TCCAATTTGCAGAAAACCCCTTATT 59.691 36.000 0.00 0.00 0.00 1.40
5754 17644 4.843516 TCCAATTTGCAGAAAACCCCTTAT 59.156 37.500 0.00 0.00 0.00 1.73
5755 17645 4.227197 TCCAATTTGCAGAAAACCCCTTA 58.773 39.130 0.00 0.00 0.00 2.69
5756 17646 3.044894 TCCAATTTGCAGAAAACCCCTT 58.955 40.909 0.00 0.00 0.00 3.95
5757 17647 2.634453 CTCCAATTTGCAGAAAACCCCT 59.366 45.455 0.00 0.00 0.00 4.79
5758 17648 2.871637 GCTCCAATTTGCAGAAAACCCC 60.872 50.000 0.00 0.00 0.00 4.95
5759 17649 2.224257 TGCTCCAATTTGCAGAAAACCC 60.224 45.455 0.00 0.00 34.84 4.11
5760 17650 3.110447 TGCTCCAATTTGCAGAAAACC 57.890 42.857 0.00 0.00 34.84 3.27
5767 17657 2.555325 CACTTCTCTGCTCCAATTTGCA 59.445 45.455 0.00 0.00 37.63 4.08
5768 17658 2.816087 TCACTTCTCTGCTCCAATTTGC 59.184 45.455 0.00 0.00 0.00 3.68
5769 17659 3.119919 GCTCACTTCTCTGCTCCAATTTG 60.120 47.826 0.00 0.00 0.00 2.32
5770 17660 3.080319 GCTCACTTCTCTGCTCCAATTT 58.920 45.455 0.00 0.00 0.00 1.82
5771 17661 2.305343 AGCTCACTTCTCTGCTCCAATT 59.695 45.455 0.00 0.00 0.00 2.32
5772 17662 1.907936 AGCTCACTTCTCTGCTCCAAT 59.092 47.619 0.00 0.00 0.00 3.16
5773 17663 1.346062 AGCTCACTTCTCTGCTCCAA 58.654 50.000 0.00 0.00 0.00 3.53
5774 17664 2.222227 TAGCTCACTTCTCTGCTCCA 57.778 50.000 0.00 0.00 37.02 3.86
5775 17665 3.118811 ACAATAGCTCACTTCTCTGCTCC 60.119 47.826 0.00 0.00 37.02 4.70
5776 17666 4.122143 ACAATAGCTCACTTCTCTGCTC 57.878 45.455 0.00 0.00 37.02 4.26
5777 17667 4.252073 CAACAATAGCTCACTTCTCTGCT 58.748 43.478 0.00 0.00 39.30 4.24
5778 17668 3.181512 GCAACAATAGCTCACTTCTCTGC 60.182 47.826 0.00 0.00 0.00 4.26
5779 17669 3.999001 TGCAACAATAGCTCACTTCTCTG 59.001 43.478 0.00 0.00 0.00 3.35
5780 17670 4.277515 TGCAACAATAGCTCACTTCTCT 57.722 40.909 0.00 0.00 0.00 3.10
5781 17671 5.362556 TTTGCAACAATAGCTCACTTCTC 57.637 39.130 0.00 0.00 0.00 2.87
5782 17672 5.772825 TTTTGCAACAATAGCTCACTTCT 57.227 34.783 0.00 0.00 0.00 2.85
5783 17673 6.617105 GCATTTTTGCAACAATAGCTCACTTC 60.617 38.462 10.36 0.00 34.41 3.01
5784 17674 5.178067 GCATTTTTGCAACAATAGCTCACTT 59.822 36.000 10.36 0.00 34.41 3.16
5785 17675 4.687483 GCATTTTTGCAACAATAGCTCACT 59.313 37.500 10.36 0.00 34.41 3.41
5786 17676 4.143052 GGCATTTTTGCAACAATAGCTCAC 60.143 41.667 21.23 9.87 36.33 3.51
5787 17677 3.995705 GGCATTTTTGCAACAATAGCTCA 59.004 39.130 21.23 0.00 36.33 4.26
5788 17678 3.995705 TGGCATTTTTGCAACAATAGCTC 59.004 39.130 21.23 15.61 36.33 4.09
5789 17679 3.747529 GTGGCATTTTTGCAACAATAGCT 59.252 39.130 21.23 0.00 38.55 3.32
5790 17680 3.497640 TGTGGCATTTTTGCAACAATAGC 59.502 39.130 10.36 14.58 44.85 2.97
5795 17685 2.983229 AGTTGTGGCATTTTTGCAACA 58.017 38.095 15.80 4.10 46.00 3.33
5796 17686 4.260579 GGTAAGTTGTGGCATTTTTGCAAC 60.261 41.667 0.00 7.98 39.13 4.17
5797 17687 3.873952 GGTAAGTTGTGGCATTTTTGCAA 59.126 39.130 0.00 0.00 36.33 4.08
5798 17688 3.133721 AGGTAAGTTGTGGCATTTTTGCA 59.866 39.130 0.00 0.00 36.33 4.08
5799 17689 3.727726 AGGTAAGTTGTGGCATTTTTGC 58.272 40.909 0.00 0.00 0.00 3.68
5800 17690 3.980775 CGAGGTAAGTTGTGGCATTTTTG 59.019 43.478 0.00 0.00 0.00 2.44
5801 17691 3.552068 GCGAGGTAAGTTGTGGCATTTTT 60.552 43.478 0.00 0.00 0.00 1.94
5802 17692 2.030274 GCGAGGTAAGTTGTGGCATTTT 60.030 45.455 0.00 0.00 0.00 1.82
5803 17693 1.539827 GCGAGGTAAGTTGTGGCATTT 59.460 47.619 0.00 0.00 0.00 2.32
5804 17694 1.165270 GCGAGGTAAGTTGTGGCATT 58.835 50.000 0.00 0.00 0.00 3.56
5805 17695 0.036164 TGCGAGGTAAGTTGTGGCAT 59.964 50.000 0.00 0.00 0.00 4.40
5806 17696 0.602638 CTGCGAGGTAAGTTGTGGCA 60.603 55.000 0.00 0.00 0.00 4.92
5807 17697 1.912371 GCTGCGAGGTAAGTTGTGGC 61.912 60.000 0.00 0.00 0.00 5.01
5808 17698 1.298859 GGCTGCGAGGTAAGTTGTGG 61.299 60.000 0.00 0.00 0.00 4.17
5809 17699 1.626654 CGGCTGCGAGGTAAGTTGTG 61.627 60.000 0.00 0.00 0.00 3.33
5810 17700 1.374252 CGGCTGCGAGGTAAGTTGT 60.374 57.895 0.00 0.00 0.00 3.32
5811 17701 0.949105 AACGGCTGCGAGGTAAGTTG 60.949 55.000 0.00 0.00 0.00 3.16
5812 17702 0.604578 TAACGGCTGCGAGGTAAGTT 59.395 50.000 0.00 0.00 0.00 2.66
5813 17703 0.172803 CTAACGGCTGCGAGGTAAGT 59.827 55.000 0.00 0.00 0.00 2.24
5814 17704 0.454600 TCTAACGGCTGCGAGGTAAG 59.545 55.000 0.00 0.00 0.00 2.34
5815 17705 1.108776 ATCTAACGGCTGCGAGGTAA 58.891 50.000 0.00 0.00 0.00 2.85
5816 17706 0.384309 CATCTAACGGCTGCGAGGTA 59.616 55.000 0.00 0.00 0.00 3.08
5817 17707 1.141881 CATCTAACGGCTGCGAGGT 59.858 57.895 0.00 0.00 0.00 3.85
5818 17708 2.240500 GCATCTAACGGCTGCGAGG 61.241 63.158 0.00 0.00 0.00 4.63
5819 17709 1.485838 CTGCATCTAACGGCTGCGAG 61.486 60.000 0.00 0.00 38.75 5.03
5820 17710 1.519234 CTGCATCTAACGGCTGCGA 60.519 57.895 0.00 0.00 38.75 5.10
5821 17711 0.877649 ATCTGCATCTAACGGCTGCG 60.878 55.000 0.00 0.00 38.75 5.18
5822 17712 0.864455 GATCTGCATCTAACGGCTGC 59.136 55.000 0.00 0.00 36.45 5.25
5823 17713 2.522836 AGATCTGCATCTAACGGCTG 57.477 50.000 0.00 0.00 37.63 4.85
5831 17721 9.788889 TCATTTGTAATCATTAGATCTGCATCT 57.211 29.630 5.18 0.00 42.48 2.90
5832 17722 9.823098 GTCATTTGTAATCATTAGATCTGCATC 57.177 33.333 5.18 0.00 31.90 3.91
5833 17723 8.501580 CGTCATTTGTAATCATTAGATCTGCAT 58.498 33.333 5.18 0.00 31.90 3.96
5834 17724 7.710475 TCGTCATTTGTAATCATTAGATCTGCA 59.290 33.333 5.18 0.00 31.90 4.41
5835 17725 8.076714 TCGTCATTTGTAATCATTAGATCTGC 57.923 34.615 5.18 0.00 31.90 4.26
5840 17730 9.377312 TGTCATTCGTCATTTGTAATCATTAGA 57.623 29.630 0.00 0.00 0.00 2.10
5841 17731 9.642312 CTGTCATTCGTCATTTGTAATCATTAG 57.358 33.333 0.00 0.00 0.00 1.73
5842 17732 9.377312 TCTGTCATTCGTCATTTGTAATCATTA 57.623 29.630 0.00 0.00 0.00 1.90
5843 17733 8.267620 TCTGTCATTCGTCATTTGTAATCATT 57.732 30.769 0.00 0.00 0.00 2.57
5844 17734 7.848223 TCTGTCATTCGTCATTTGTAATCAT 57.152 32.000 0.00 0.00 0.00 2.45
5845 17735 7.848223 ATCTGTCATTCGTCATTTGTAATCA 57.152 32.000 0.00 0.00 0.00 2.57
5846 17736 8.817100 TGTATCTGTCATTCGTCATTTGTAATC 58.183 33.333 0.00 0.00 0.00 1.75
5847 17737 8.716646 TGTATCTGTCATTCGTCATTTGTAAT 57.283 30.769 0.00 0.00 0.00 1.89
5848 17738 8.716646 ATGTATCTGTCATTCGTCATTTGTAA 57.283 30.769 0.00 0.00 0.00 2.41
5849 17739 7.978975 TGATGTATCTGTCATTCGTCATTTGTA 59.021 33.333 0.00 0.00 0.00 2.41
5850 17740 6.818142 TGATGTATCTGTCATTCGTCATTTGT 59.182 34.615 0.00 0.00 0.00 2.83
5851 17741 7.237920 TGATGTATCTGTCATTCGTCATTTG 57.762 36.000 0.00 0.00 0.00 2.32
5852 17742 7.712205 TGATGATGTATCTGTCATTCGTCATTT 59.288 33.333 0.00 0.00 35.70 2.32
5853 17743 7.212274 TGATGATGTATCTGTCATTCGTCATT 58.788 34.615 0.00 0.00 35.70 2.57
5854 17744 6.752168 TGATGATGTATCTGTCATTCGTCAT 58.248 36.000 0.00 0.00 37.43 3.06
5855 17745 6.147864 TGATGATGTATCTGTCATTCGTCA 57.852 37.500 0.00 0.00 35.33 4.35
5856 17746 6.865205 TGATGATGATGTATCTGTCATTCGTC 59.135 38.462 11.68 0.00 35.33 4.20
5857 17747 6.752168 TGATGATGATGTATCTGTCATTCGT 58.248 36.000 11.68 0.00 35.33 3.85
5858 17748 7.544566 TGATGATGATGATGTATCTGTCATTCG 59.455 37.037 11.68 0.00 39.59 3.34
5859 17749 8.657729 GTGATGATGATGATGTATCTGTCATTC 58.342 37.037 11.68 8.66 39.59 2.67
5860 17750 8.376270 AGTGATGATGATGATGTATCTGTCATT 58.624 33.333 11.68 2.21 39.59 2.57
5861 17751 7.819900 CAGTGATGATGATGATGTATCTGTCAT 59.180 37.037 10.78 10.78 40.86 3.06
5862 17752 7.014905 TCAGTGATGATGATGATGTATCTGTCA 59.985 37.037 0.00 0.00 36.38 3.58
5863 17753 7.376615 TCAGTGATGATGATGATGTATCTGTC 58.623 38.462 0.00 0.00 36.71 3.51
5864 17754 7.015389 ACTCAGTGATGATGATGATGTATCTGT 59.985 37.037 0.00 0.00 36.71 3.41
5865 17755 7.379750 ACTCAGTGATGATGATGATGTATCTG 58.620 38.462 0.00 0.00 36.71 2.90
5866 17756 7.452189 AGACTCAGTGATGATGATGATGTATCT 59.548 37.037 0.00 0.00 36.71 1.98
5867 17757 7.604549 AGACTCAGTGATGATGATGATGTATC 58.395 38.462 0.00 0.00 36.29 2.24
5868 17758 7.541916 AGACTCAGTGATGATGATGATGTAT 57.458 36.000 0.00 0.00 0.00 2.29
5869 17759 6.973460 AGACTCAGTGATGATGATGATGTA 57.027 37.500 0.00 0.00 0.00 2.29
5870 17760 5.873146 AGACTCAGTGATGATGATGATGT 57.127 39.130 0.00 0.00 0.00 3.06
5871 17761 7.555306 AAAAGACTCAGTGATGATGATGATG 57.445 36.000 0.00 0.00 0.00 3.07
5873 17763 9.978044 CTATAAAAGACTCAGTGATGATGATGA 57.022 33.333 0.00 0.00 0.00 2.92
5874 17764 9.205719 CCTATAAAAGACTCAGTGATGATGATG 57.794 37.037 0.00 0.00 0.00 3.07
5875 17765 9.152327 TCCTATAAAAGACTCAGTGATGATGAT 57.848 33.333 0.00 0.00 0.00 2.45
5876 17766 8.539117 TCCTATAAAAGACTCAGTGATGATGA 57.461 34.615 0.00 0.00 0.00 2.92
5877 17767 8.420222 ACTCCTATAAAAGACTCAGTGATGATG 58.580 37.037 0.00 0.00 0.00 3.07
5878 17768 8.546083 ACTCCTATAAAAGACTCAGTGATGAT 57.454 34.615 0.00 0.00 0.00 2.45
5879 17769 7.962995 ACTCCTATAAAAGACTCAGTGATGA 57.037 36.000 0.00 0.00 0.00 2.92
5880 17770 9.126151 TCTACTCCTATAAAAGACTCAGTGATG 57.874 37.037 0.00 0.00 0.00 3.07
5881 17771 9.875708 ATCTACTCCTATAAAAGACTCAGTGAT 57.124 33.333 0.00 0.00 0.00 3.06
5898 17788 7.663493 GCATTGCCTTTTTATCTATCTACTCCT 59.337 37.037 0.00 0.00 0.00 3.69
5899 17789 7.445402 TGCATTGCCTTTTTATCTATCTACTCC 59.555 37.037 6.12 0.00 0.00 3.85
5900 17790 8.383318 TGCATTGCCTTTTTATCTATCTACTC 57.617 34.615 6.12 0.00 0.00 2.59
5901 17791 7.446625 CCTGCATTGCCTTTTTATCTATCTACT 59.553 37.037 6.12 0.00 0.00 2.57
5902 17792 7.229506 ACCTGCATTGCCTTTTTATCTATCTAC 59.770 37.037 6.12 0.00 0.00 2.59
5903 17793 7.229306 CACCTGCATTGCCTTTTTATCTATCTA 59.771 37.037 6.12 0.00 0.00 1.98
5904 17794 6.040166 CACCTGCATTGCCTTTTTATCTATCT 59.960 38.462 6.12 0.00 0.00 1.98
5905 17795 6.183360 ACACCTGCATTGCCTTTTTATCTATC 60.183 38.462 6.12 0.00 0.00 2.08
5906 17796 5.658190 ACACCTGCATTGCCTTTTTATCTAT 59.342 36.000 6.12 0.00 0.00 1.98
5907 17797 5.016173 ACACCTGCATTGCCTTTTTATCTA 58.984 37.500 6.12 0.00 0.00 1.98
5908 17798 3.834231 ACACCTGCATTGCCTTTTTATCT 59.166 39.130 6.12 0.00 0.00 1.98
5916 17806 1.368579 GCAAACACCTGCATTGCCT 59.631 52.632 10.24 0.00 42.70 4.75
5968 17888 1.261938 TATATCGGGCCCGGACCATG 61.262 60.000 42.36 14.76 40.25 3.66
5969 17889 0.326238 ATATATCGGGCCCGGACCAT 60.326 55.000 42.36 29.95 40.25 3.55
5975 17895 1.112113 AGTGCTATATATCGGGCCCG 58.888 55.000 39.13 39.13 41.35 6.13
5982 17902 8.043710 GCCCCAATATATCCAGTGCTATATATC 58.956 40.741 12.86 2.64 32.55 1.63
5989 17909 2.040813 CAGCCCCAATATATCCAGTGCT 59.959 50.000 0.00 0.00 0.00 4.40
6023 17952 1.181786 TCCCCCAATAGCGCTTTTTG 58.818 50.000 18.68 19.63 0.00 2.44
6045 17974 8.492673 TGTATCTCATTTTAGATGGTGTGTTC 57.507 34.615 0.00 0.00 36.85 3.18
6048 17977 8.498054 ACTTGTATCTCATTTTAGATGGTGTG 57.502 34.615 0.00 0.00 36.85 3.82
6092 18021 9.084533 GGCACATATTTAGGTTATAATCCCAAA 57.915 33.333 0.00 0.00 0.00 3.28
6093 18022 7.392113 CGGCACATATTTAGGTTATAATCCCAA 59.608 37.037 0.00 0.00 0.00 4.12
6094 18023 6.882140 CGGCACATATTTAGGTTATAATCCCA 59.118 38.462 0.00 0.00 0.00 4.37
6095 18024 6.882678 ACGGCACATATTTAGGTTATAATCCC 59.117 38.462 0.00 0.00 0.00 3.85
6097 18026 7.094975 TGCACGGCACATATTTAGGTTATAATC 60.095 37.037 0.00 0.00 31.71 1.75
6098 18027 6.712998 TGCACGGCACATATTTAGGTTATAAT 59.287 34.615 0.00 0.00 31.71 1.28
6099 18028 6.056236 TGCACGGCACATATTTAGGTTATAA 58.944 36.000 0.00 0.00 31.71 0.98
6101 18030 4.456535 TGCACGGCACATATTTAGGTTAT 58.543 39.130 0.00 0.00 31.71 1.89
6102 18031 3.875125 TGCACGGCACATATTTAGGTTA 58.125 40.909 0.00 0.00 31.71 2.85
6103 18032 2.717390 TGCACGGCACATATTTAGGTT 58.283 42.857 0.00 0.00 31.71 3.50
6104 18033 2.411628 TGCACGGCACATATTTAGGT 57.588 45.000 0.00 0.00 31.71 3.08


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.