Multiple sequence alignment - TraesCS2A01G532800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G532800 chr2A 100.000 5463 0 0 1 5463 748968651 748963189 0.000000e+00 10089.0
1 TraesCS2A01G532800 chr2A 93.217 575 16 14 4909 5463 193461627 193461056 0.000000e+00 824.0
2 TraesCS2A01G532800 chr2A 93.043 575 17 14 4909 5463 193460154 193459583 0.000000e+00 819.0
3 TraesCS2A01G532800 chr2A 95.349 516 19 4 4551 5063 193460369 193459856 0.000000e+00 815.0
4 TraesCS2A01G532800 chr2A 95.331 514 19 4 4552 5063 193461839 193461329 0.000000e+00 811.0
5 TraesCS2A01G532800 chr2A 91.979 187 7 4 64 247 770139968 770140149 7.020000e-64 255.0
6 TraesCS2A01G532800 chr2D 90.658 4378 255 70 237 4552 618153887 618149602 0.000000e+00 5677.0
7 TraesCS2A01G532800 chr2B 88.532 3148 233 62 458 3541 754667426 754664343 0.000000e+00 3696.0
8 TraesCS2A01G532800 chr2B 90.042 954 75 12 3541 4481 754664373 754663427 0.000000e+00 1218.0
9 TraesCS2A01G532800 chr2B 92.522 575 20 14 4909 5463 74694647 74695218 0.000000e+00 802.0
10 TraesCS2A01G532800 chr2B 98.039 51 1 0 4500 4550 754663429 754663379 7.540000e-14 89.8
11 TraesCS2A01G532800 chr3A 96.132 517 17 2 4549 5063 688923073 688922558 0.000000e+00 841.0
12 TraesCS2A01G532800 chr3A 95.146 515 21 3 4551 5063 7249661 7250173 0.000000e+00 809.0
13 TraesCS2A01G532800 chr3A 93.220 177 5 2 65 238 677843612 677843440 2.530000e-63 254.0
14 TraesCS2A01G532800 chr3A 91.444 187 7 5 66 249 370246055 370245875 1.180000e-61 248.0
15 TraesCS2A01G532800 chr4A 93.217 575 16 14 4909 5463 24611770 24612341 0.000000e+00 824.0
16 TraesCS2A01G532800 chr4A 95.543 516 18 4 4551 5063 584140082 584140595 0.000000e+00 821.0
17 TraesCS2A01G532800 chr4A 92.870 575 16 16 4909 5463 584140297 584140866 0.000000e+00 811.0
18 TraesCS2A01G532800 chr6A 95.551 517 17 4 4551 5063 55027640 55028154 0.000000e+00 822.0
19 TraesCS2A01G532800 chr6A 92.882 576 17 15 4909 5463 55027856 55028428 0.000000e+00 815.0
20 TraesCS2A01G532800 chr7A 93.056 576 16 15 4909 5463 8737243 8737815 0.000000e+00 821.0
21 TraesCS2A01G532800 chr7A 92.870 575 18 14 4909 5463 155971339 155970768 0.000000e+00 813.0
22 TraesCS2A01G532800 chr7A 95.155 516 19 4 4551 5063 48503416 48503928 0.000000e+00 809.0
23 TraesCS2A01G532800 chr7A 90.526 190 8 6 64 248 37186455 37186639 5.470000e-60 243.0
24 TraesCS2A01G532800 chr7A 95.082 61 3 0 2635 2695 567516984 567516924 4.500000e-16 97.1
25 TraesCS2A01G532800 chr5A 95.349 516 19 4 4551 5063 531559557 531560070 0.000000e+00 815.0
26 TraesCS2A01G532800 chr5A 93.820 178 4 4 66 240 703668361 703668188 1.510000e-65 261.0
27 TraesCS2A01G532800 chr5B 92.696 575 20 13 4909 5463 644953705 644953133 0.000000e+00 809.0
28 TraesCS2A01G532800 chr3B 95.155 516 20 4 4551 5063 443352057 443351544 0.000000e+00 809.0
29 TraesCS2A01G532800 chr3B 90.206 194 9 7 66 253 810265402 810265591 1.520000e-60 244.0
30 TraesCS2A01G532800 chrUn 91.979 187 7 4 64 247 345391369 345391550 7.020000e-64 255.0
31 TraesCS2A01G532800 chr6B 91.979 187 7 4 64 247 568061604 568061423 7.020000e-64 255.0
32 TraesCS2A01G532800 chr7B 92.222 180 7 4 66 242 658320050 658319875 1.180000e-61 248.0
33 TraesCS2A01G532800 chr7B 95.082 61 3 0 2635 2695 530020036 530019976 4.500000e-16 97.1
34 TraesCS2A01G532800 chr7B 85.000 80 8 4 3120 3197 530019540 530019463 1.630000e-10 78.7
35 TraesCS2A01G532800 chr7D 95.082 61 3 0 2635 2695 501007586 501007526 4.500000e-16 97.1
36 TraesCS2A01G532800 chr7D 84.524 84 9 4 3116 3197 501007094 501007013 4.540000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G532800 chr2A 748963189 748968651 5462 True 10089.000000 10089 100.000000 1 5463 1 chr2A.!!$R1 5462
1 TraesCS2A01G532800 chr2A 193459583 193461839 2256 True 817.250000 824 94.235000 4551 5463 4 chr2A.!!$R2 912
2 TraesCS2A01G532800 chr2D 618149602 618153887 4285 True 5677.000000 5677 90.658000 237 4552 1 chr2D.!!$R1 4315
3 TraesCS2A01G532800 chr2B 754663379 754667426 4047 True 1667.933333 3696 92.204333 458 4550 3 chr2B.!!$R1 4092
4 TraesCS2A01G532800 chr2B 74694647 74695218 571 False 802.000000 802 92.522000 4909 5463 1 chr2B.!!$F1 554
5 TraesCS2A01G532800 chr3A 688922558 688923073 515 True 841.000000 841 96.132000 4549 5063 1 chr3A.!!$R3 514
6 TraesCS2A01G532800 chr3A 7249661 7250173 512 False 809.000000 809 95.146000 4551 5063 1 chr3A.!!$F1 512
7 TraesCS2A01G532800 chr4A 24611770 24612341 571 False 824.000000 824 93.217000 4909 5463 1 chr4A.!!$F1 554
8 TraesCS2A01G532800 chr4A 584140082 584140866 784 False 816.000000 821 94.206500 4551 5463 2 chr4A.!!$F2 912
9 TraesCS2A01G532800 chr6A 55027640 55028428 788 False 818.500000 822 94.216500 4551 5463 2 chr6A.!!$F1 912
10 TraesCS2A01G532800 chr7A 8737243 8737815 572 False 821.000000 821 93.056000 4909 5463 1 chr7A.!!$F1 554
11 TraesCS2A01G532800 chr7A 155970768 155971339 571 True 813.000000 813 92.870000 4909 5463 1 chr7A.!!$R1 554
12 TraesCS2A01G532800 chr7A 48503416 48503928 512 False 809.000000 809 95.155000 4551 5063 1 chr7A.!!$F3 512
13 TraesCS2A01G532800 chr5A 531559557 531560070 513 False 815.000000 815 95.349000 4551 5063 1 chr5A.!!$F1 512
14 TraesCS2A01G532800 chr5B 644953133 644953705 572 True 809.000000 809 92.696000 4909 5463 1 chr5B.!!$R1 554
15 TraesCS2A01G532800 chr3B 443351544 443352057 513 True 809.000000 809 95.155000 4551 5063 1 chr3B.!!$R1 512

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
434 444 0.301987 GCGCTACTTTCCGAAGATGC 59.698 55.000 0.00 0.0 36.69 3.91 F
921 954 1.061546 TAACTTCCCCCACTCACACC 58.938 55.000 0.00 0.0 0.00 4.16 F
2284 2343 0.962356 CAGCTGTTGGCCCAGTTAGG 60.962 60.000 5.25 0.0 43.05 2.69 F
2467 2526 1.609580 GCATTCCACCGTGTAACTGGA 60.610 52.381 0.00 0.0 39.17 3.86 F
4082 4190 0.245539 CCATTCGGTACACGGACTGT 59.754 55.000 0.00 0.0 44.45 3.55 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1948 1998 0.178301 TTGCACCGTACACAGACCAA 59.822 50.000 0.00 0.0 0.00 3.67 R
2389 2448 0.401738 CACATGGACCTTCCTGTGGT 59.598 55.000 13.04 0.0 39.65 4.16 R
4001 4109 0.106015 GTCCATTAGGGGCCAGCAAT 60.106 55.000 4.39 0.0 34.11 3.56 R
4372 4492 0.612174 CCTCCTTCCACTCGTCCTCA 60.612 60.000 0.00 0.0 0.00 3.86 R
4907 5032 4.534500 TCTGTTGATTTGGCTAAGGTAGGA 59.466 41.667 0.00 0.0 0.00 2.94 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 5.452777 GTTTTTCCGAAGAAGATGAACTGG 58.547 41.667 0.00 0.00 32.35 4.00
24 25 4.351874 TTTCCGAAGAAGATGAACTGGT 57.648 40.909 0.00 0.00 32.35 4.00
25 26 5.477607 TTTCCGAAGAAGATGAACTGGTA 57.522 39.130 0.00 0.00 32.35 3.25
26 27 4.720649 TCCGAAGAAGATGAACTGGTAG 57.279 45.455 0.00 0.00 0.00 3.18
27 28 3.119101 TCCGAAGAAGATGAACTGGTAGC 60.119 47.826 0.00 0.00 0.00 3.58
28 29 3.368427 CCGAAGAAGATGAACTGGTAGCA 60.368 47.826 0.00 0.00 0.00 3.49
29 30 4.437239 CGAAGAAGATGAACTGGTAGCAT 58.563 43.478 0.00 0.00 0.00 3.79
30 31 4.505922 CGAAGAAGATGAACTGGTAGCATC 59.494 45.833 0.00 0.00 38.89 3.91
31 32 4.052159 AGAAGATGAACTGGTAGCATCG 57.948 45.455 0.00 0.00 42.36 3.84
32 33 3.449018 AGAAGATGAACTGGTAGCATCGT 59.551 43.478 0.00 0.00 42.36 3.73
33 34 3.444703 AGATGAACTGGTAGCATCGTC 57.555 47.619 8.93 8.93 42.36 4.20
34 35 2.120232 GATGAACTGGTAGCATCGTCG 58.880 52.381 0.00 0.00 30.41 5.12
35 36 0.457853 TGAACTGGTAGCATCGTCGC 60.458 55.000 0.00 0.00 0.00 5.19
36 37 1.472276 GAACTGGTAGCATCGTCGCG 61.472 60.000 0.00 0.00 36.85 5.87
37 38 2.655364 CTGGTAGCATCGTCGCGG 60.655 66.667 6.13 0.00 36.85 6.46
38 39 4.865761 TGGTAGCATCGTCGCGGC 62.866 66.667 6.13 1.93 36.85 6.53
44 45 3.261951 CATCGTCGCGGCGGAAAT 61.262 61.111 34.24 17.17 0.00 2.17
45 46 2.960129 ATCGTCGCGGCGGAAATC 60.960 61.111 34.24 7.35 0.00 2.17
46 47 3.709880 ATCGTCGCGGCGGAAATCA 62.710 57.895 34.24 13.55 0.00 2.57
47 48 4.204891 CGTCGCGGCGGAAATCAC 62.205 66.667 27.94 10.96 0.00 3.06
48 49 2.813908 GTCGCGGCGGAAATCACT 60.814 61.111 23.46 0.00 0.00 3.41
49 50 2.047655 TCGCGGCGGAAATCACTT 60.048 55.556 23.46 0.00 0.00 3.16
50 51 2.098233 TCGCGGCGGAAATCACTTC 61.098 57.895 23.46 0.00 0.00 3.01
60 61 4.143986 GGAAATCACTTCCGATCCTTCT 57.856 45.455 0.00 0.00 44.38 2.85
61 62 4.518249 GGAAATCACTTCCGATCCTTCTT 58.482 43.478 0.00 0.00 44.38 2.52
62 63 4.572795 GGAAATCACTTCCGATCCTTCTTC 59.427 45.833 0.00 0.00 44.38 2.87
63 64 5.423886 GAAATCACTTCCGATCCTTCTTCT 58.576 41.667 0.00 0.00 0.00 2.85
64 65 3.876274 TCACTTCCGATCCTTCTTCTG 57.124 47.619 0.00 0.00 0.00 3.02
65 66 3.165875 TCACTTCCGATCCTTCTTCTGT 58.834 45.455 0.00 0.00 0.00 3.41
66 67 4.341487 TCACTTCCGATCCTTCTTCTGTA 58.659 43.478 0.00 0.00 0.00 2.74
67 68 4.158025 TCACTTCCGATCCTTCTTCTGTAC 59.842 45.833 0.00 0.00 0.00 2.90
68 69 4.158764 CACTTCCGATCCTTCTTCTGTACT 59.841 45.833 0.00 0.00 0.00 2.73
69 70 4.399934 ACTTCCGATCCTTCTTCTGTACTC 59.600 45.833 0.00 0.00 0.00 2.59
70 71 3.288964 TCCGATCCTTCTTCTGTACTCC 58.711 50.000 0.00 0.00 0.00 3.85
71 72 2.362717 CCGATCCTTCTTCTGTACTCCC 59.637 54.545 0.00 0.00 0.00 4.30
72 73 3.292460 CGATCCTTCTTCTGTACTCCCT 58.708 50.000 0.00 0.00 0.00 4.20
73 74 3.316868 CGATCCTTCTTCTGTACTCCCTC 59.683 52.174 0.00 0.00 0.00 4.30
74 75 3.103080 TCCTTCTTCTGTACTCCCTCC 57.897 52.381 0.00 0.00 0.00 4.30
75 76 1.751924 CCTTCTTCTGTACTCCCTCCG 59.248 57.143 0.00 0.00 0.00 4.63
76 77 2.448453 CTTCTTCTGTACTCCCTCCGT 58.552 52.381 0.00 0.00 0.00 4.69
77 78 2.599408 TCTTCTGTACTCCCTCCGTT 57.401 50.000 0.00 0.00 0.00 4.44
78 79 2.444421 TCTTCTGTACTCCCTCCGTTC 58.556 52.381 0.00 0.00 0.00 3.95
79 80 1.477295 CTTCTGTACTCCCTCCGTTCC 59.523 57.143 0.00 0.00 0.00 3.62
80 81 0.702902 TCTGTACTCCCTCCGTTCCT 59.297 55.000 0.00 0.00 0.00 3.36
81 82 1.918262 TCTGTACTCCCTCCGTTCCTA 59.082 52.381 0.00 0.00 0.00 2.94
82 83 2.309755 TCTGTACTCCCTCCGTTCCTAA 59.690 50.000 0.00 0.00 0.00 2.69
83 84 3.094572 CTGTACTCCCTCCGTTCCTAAA 58.905 50.000 0.00 0.00 0.00 1.85
84 85 3.705072 CTGTACTCCCTCCGTTCCTAAAT 59.295 47.826 0.00 0.00 0.00 1.40
85 86 4.870636 TGTACTCCCTCCGTTCCTAAATA 58.129 43.478 0.00 0.00 0.00 1.40
86 87 4.646492 TGTACTCCCTCCGTTCCTAAATAC 59.354 45.833 0.00 0.00 0.00 1.89
87 88 3.991683 ACTCCCTCCGTTCCTAAATACT 58.008 45.455 0.00 0.00 0.00 2.12
88 89 4.359996 ACTCCCTCCGTTCCTAAATACTT 58.640 43.478 0.00 0.00 0.00 2.24
89 90 4.161754 ACTCCCTCCGTTCCTAAATACTTG 59.838 45.833 0.00 0.00 0.00 3.16
90 91 4.098894 TCCCTCCGTTCCTAAATACTTGT 58.901 43.478 0.00 0.00 0.00 3.16
91 92 4.161001 TCCCTCCGTTCCTAAATACTTGTC 59.839 45.833 0.00 0.00 0.00 3.18
92 93 4.161754 CCCTCCGTTCCTAAATACTTGTCT 59.838 45.833 0.00 0.00 0.00 3.41
93 94 5.338137 CCCTCCGTTCCTAAATACTTGTCTT 60.338 44.000 0.00 0.00 0.00 3.01
94 95 6.171213 CCTCCGTTCCTAAATACTTGTCTTT 58.829 40.000 0.00 0.00 0.00 2.52
95 96 6.313164 CCTCCGTTCCTAAATACTTGTCTTTC 59.687 42.308 0.00 0.00 0.00 2.62
96 97 7.001099 TCCGTTCCTAAATACTTGTCTTTCT 57.999 36.000 0.00 0.00 0.00 2.52
97 98 8.125978 TCCGTTCCTAAATACTTGTCTTTCTA 57.874 34.615 0.00 0.00 0.00 2.10
98 99 8.248945 TCCGTTCCTAAATACTTGTCTTTCTAG 58.751 37.037 0.00 0.00 0.00 2.43
99 100 7.491696 CCGTTCCTAAATACTTGTCTTTCTAGG 59.508 40.741 0.00 0.00 0.00 3.02
100 101 7.010275 CGTTCCTAAATACTTGTCTTTCTAGGC 59.990 40.741 0.00 0.00 0.00 3.93
101 102 7.490657 TCCTAAATACTTGTCTTTCTAGGCA 57.509 36.000 0.00 0.00 33.22 4.75
102 103 8.090788 TCCTAAATACTTGTCTTTCTAGGCAT 57.909 34.615 0.00 0.00 35.56 4.40
103 104 8.548877 TCCTAAATACTTGTCTTTCTAGGCATT 58.451 33.333 0.00 0.00 35.56 3.56
104 105 9.178758 CCTAAATACTTGTCTTTCTAGGCATTT 57.821 33.333 0.00 0.00 35.56 2.32
106 107 8.635765 AAATACTTGTCTTTCTAGGCATTTCA 57.364 30.769 0.00 0.00 35.56 2.69
107 108 8.635765 AATACTTGTCTTTCTAGGCATTTCAA 57.364 30.769 0.00 0.00 35.56 2.69
108 109 6.319141 ACTTGTCTTTCTAGGCATTTCAAC 57.681 37.500 0.00 0.00 35.56 3.18
109 110 5.827797 ACTTGTCTTTCTAGGCATTTCAACA 59.172 36.000 0.00 0.00 35.56 3.33
110 111 6.321181 ACTTGTCTTTCTAGGCATTTCAACAA 59.679 34.615 0.00 0.00 35.56 2.83
111 112 6.317789 TGTCTTTCTAGGCATTTCAACAAG 57.682 37.500 0.00 0.00 29.10 3.16
112 113 5.827797 TGTCTTTCTAGGCATTTCAACAAGT 59.172 36.000 0.00 0.00 29.10 3.16
113 114 6.145535 GTCTTTCTAGGCATTTCAACAAGTG 58.854 40.000 0.00 0.00 0.00 3.16
114 115 6.017109 GTCTTTCTAGGCATTTCAACAAGTGA 60.017 38.462 0.00 0.00 0.00 3.41
115 116 5.689383 TTCTAGGCATTTCAACAAGTGAC 57.311 39.130 0.00 0.00 35.39 3.67
116 117 4.973168 TCTAGGCATTTCAACAAGTGACT 58.027 39.130 0.00 0.00 40.60 3.41
117 118 6.109156 TCTAGGCATTTCAACAAGTGACTA 57.891 37.500 0.00 0.00 38.51 2.59
118 119 5.932303 TCTAGGCATTTCAACAAGTGACTAC 59.068 40.000 0.00 0.00 38.51 2.73
119 120 4.460263 AGGCATTTCAACAAGTGACTACA 58.540 39.130 0.00 0.00 35.84 2.74
120 121 5.072741 AGGCATTTCAACAAGTGACTACAT 58.927 37.500 0.00 0.00 35.84 2.29
121 122 6.237901 AGGCATTTCAACAAGTGACTACATA 58.762 36.000 0.00 0.00 35.84 2.29
122 123 6.149474 AGGCATTTCAACAAGTGACTACATAC 59.851 38.462 0.00 0.00 35.84 2.39
123 124 6.015504 GCATTTCAACAAGTGACTACATACG 58.984 40.000 0.00 0.00 35.39 3.06
124 125 5.585500 TTTCAACAAGTGACTACATACGC 57.415 39.130 0.00 0.00 35.39 4.42
125 126 4.245845 TCAACAAGTGACTACATACGCA 57.754 40.909 0.00 0.00 0.00 5.24
126 127 4.623002 TCAACAAGTGACTACATACGCAA 58.377 39.130 0.00 0.00 0.00 4.85
127 128 5.051153 TCAACAAGTGACTACATACGCAAA 58.949 37.500 0.00 0.00 0.00 3.68
128 129 5.524281 TCAACAAGTGACTACATACGCAAAA 59.476 36.000 0.00 0.00 0.00 2.44
129 130 6.203915 TCAACAAGTGACTACATACGCAAAAT 59.796 34.615 0.00 0.00 0.00 1.82
130 131 5.927030 ACAAGTGACTACATACGCAAAATG 58.073 37.500 0.00 0.00 0.00 2.32
131 132 5.699001 ACAAGTGACTACATACGCAAAATGA 59.301 36.000 0.00 0.00 0.00 2.57
132 133 6.128553 ACAAGTGACTACATACGCAAAATGAG 60.129 38.462 0.00 0.00 0.00 2.90
133 134 5.479306 AGTGACTACATACGCAAAATGAGT 58.521 37.500 0.00 0.00 34.10 3.41
134 135 5.348724 AGTGACTACATACGCAAAATGAGTG 59.651 40.000 0.00 0.00 31.51 3.51
135 136 5.347635 GTGACTACATACGCAAAATGAGTGA 59.652 40.000 0.00 0.00 31.51 3.41
136 137 5.929415 TGACTACATACGCAAAATGAGTGAA 59.071 36.000 0.00 0.00 31.51 3.18
137 138 6.593770 TGACTACATACGCAAAATGAGTGAAT 59.406 34.615 0.00 0.00 31.51 2.57
138 139 7.005062 ACTACATACGCAAAATGAGTGAATC 57.995 36.000 0.00 0.00 31.51 2.52
139 140 6.818644 ACTACATACGCAAAATGAGTGAATCT 59.181 34.615 0.00 0.00 31.51 2.40
140 141 7.979537 ACTACATACGCAAAATGAGTGAATCTA 59.020 33.333 0.00 0.00 31.51 1.98
141 142 7.005062 ACATACGCAAAATGAGTGAATCTAC 57.995 36.000 0.00 0.00 31.51 2.59
142 143 4.584029 ACGCAAAATGAGTGAATCTACG 57.416 40.909 0.00 0.00 0.00 3.51
143 144 3.181520 ACGCAAAATGAGTGAATCTACGC 60.182 43.478 0.00 0.00 0.00 4.42
144 145 3.062639 CGCAAAATGAGTGAATCTACGCT 59.937 43.478 0.00 0.00 0.00 5.07
145 146 4.582459 GCAAAATGAGTGAATCTACGCTC 58.418 43.478 0.00 0.00 44.55 5.03
146 147 4.331168 GCAAAATGAGTGAATCTACGCTCT 59.669 41.667 0.00 0.00 44.58 4.09
147 148 5.520288 GCAAAATGAGTGAATCTACGCTCTA 59.480 40.000 0.00 0.00 44.58 2.43
148 149 6.036083 GCAAAATGAGTGAATCTACGCTCTAA 59.964 38.462 0.00 0.00 44.58 2.10
149 150 7.413000 GCAAAATGAGTGAATCTACGCTCTAAA 60.413 37.037 0.00 0.00 44.58 1.85
150 151 8.443160 CAAAATGAGTGAATCTACGCTCTAAAA 58.557 33.333 0.00 0.00 44.58 1.52
151 152 8.723942 AAATGAGTGAATCTACGCTCTAAAAT 57.276 30.769 0.00 0.00 44.58 1.82
152 153 9.817809 AAATGAGTGAATCTACGCTCTAAAATA 57.182 29.630 0.00 0.00 44.58 1.40
153 154 9.988815 AATGAGTGAATCTACGCTCTAAAATAT 57.011 29.630 0.00 0.00 44.58 1.28
154 155 8.803201 TGAGTGAATCTACGCTCTAAAATATG 57.197 34.615 0.00 0.00 44.58 1.78
155 156 8.414003 TGAGTGAATCTACGCTCTAAAATATGT 58.586 33.333 0.00 0.00 44.58 2.29
156 157 8.804688 AGTGAATCTACGCTCTAAAATATGTC 57.195 34.615 0.00 0.00 0.00 3.06
157 158 8.634444 AGTGAATCTACGCTCTAAAATATGTCT 58.366 33.333 0.00 0.00 0.00 3.41
158 159 9.894783 GTGAATCTACGCTCTAAAATATGTCTA 57.105 33.333 0.00 0.00 0.00 2.59
159 160 9.894783 TGAATCTACGCTCTAAAATATGTCTAC 57.105 33.333 0.00 0.00 0.00 2.59
160 161 9.894783 GAATCTACGCTCTAAAATATGTCTACA 57.105 33.333 0.00 0.00 0.00 2.74
224 225 9.780186 AGAAAGATAAATATTTAGGAACGGAGG 57.220 33.333 13.15 0.00 0.00 4.30
225 226 8.919777 AAAGATAAATATTTAGGAACGGAGGG 57.080 34.615 13.15 0.00 0.00 4.30
226 227 7.867160 AGATAAATATTTAGGAACGGAGGGA 57.133 36.000 13.15 0.00 0.00 4.20
227 228 7.908453 AGATAAATATTTAGGAACGGAGGGAG 58.092 38.462 13.15 0.00 0.00 4.30
228 229 5.970501 AAATATTTAGGAACGGAGGGAGT 57.029 39.130 0.00 0.00 0.00 3.85
229 230 8.731591 ATAAATATTTAGGAACGGAGGGAGTA 57.268 34.615 13.15 0.00 0.00 2.59
230 231 6.667558 AATATTTAGGAACGGAGGGAGTAG 57.332 41.667 0.00 0.00 0.00 2.57
231 232 3.463048 TTTAGGAACGGAGGGAGTAGT 57.537 47.619 0.00 0.00 0.00 2.73
232 233 4.591321 TTTAGGAACGGAGGGAGTAGTA 57.409 45.455 0.00 0.00 0.00 1.82
233 234 4.591321 TTAGGAACGGAGGGAGTAGTAA 57.409 45.455 0.00 0.00 0.00 2.24
234 235 3.463048 AGGAACGGAGGGAGTAGTAAA 57.537 47.619 0.00 0.00 0.00 2.01
235 236 3.991683 AGGAACGGAGGGAGTAGTAAAT 58.008 45.455 0.00 0.00 0.00 1.40
236 237 5.134725 AGGAACGGAGGGAGTAGTAAATA 57.865 43.478 0.00 0.00 0.00 1.40
237 238 5.522641 AGGAACGGAGGGAGTAGTAAATAA 58.477 41.667 0.00 0.00 0.00 1.40
238 239 6.141790 AGGAACGGAGGGAGTAGTAAATAAT 58.858 40.000 0.00 0.00 0.00 1.28
239 240 7.300658 AGGAACGGAGGGAGTAGTAAATAATA 58.699 38.462 0.00 0.00 0.00 0.98
240 241 7.232330 AGGAACGGAGGGAGTAGTAAATAATAC 59.768 40.741 0.00 0.00 0.00 1.89
241 242 7.014615 GGAACGGAGGGAGTAGTAAATAATACA 59.985 40.741 1.50 0.00 0.00 2.29
242 243 7.521871 ACGGAGGGAGTAGTAAATAATACAG 57.478 40.000 1.50 0.00 0.00 2.74
258 259 9.687210 AAATAATACAGTTTTTCTTTTCGGGAC 57.313 29.630 0.00 0.00 0.00 4.46
259 260 6.954487 AATACAGTTTTTCTTTTCGGGACT 57.046 33.333 0.00 0.00 0.00 3.85
278 279 5.954150 GGGACTAGTATAATATCGTTGGGGA 59.046 44.000 0.00 0.00 0.00 4.81
286 287 1.459450 TATCGTTGGGGAAAAGCAGC 58.541 50.000 0.00 0.00 0.00 5.25
287 288 1.586154 ATCGTTGGGGAAAAGCAGCG 61.586 55.000 0.00 0.00 0.00 5.18
288 289 2.049156 GTTGGGGAAAAGCAGCGC 60.049 61.111 0.00 0.00 0.00 5.92
307 308 0.879090 CGCCCCCTGTTTAGTTGTTC 59.121 55.000 0.00 0.00 0.00 3.18
321 322 1.067060 GTTGTTCCCAAGTTCTGCACC 59.933 52.381 0.00 0.00 0.00 5.01
347 348 4.318021 GTGCATGCGCGCCCTATG 62.318 66.667 30.77 25.47 43.09 2.23
361 362 4.072131 CGCCCTATGTGCCATACTTTATT 58.928 43.478 0.00 0.00 0.00 1.40
362 363 4.154195 CGCCCTATGTGCCATACTTTATTC 59.846 45.833 0.00 0.00 0.00 1.75
383 391 3.876914 TCTGCTTCTTGTTACTTGGTGTG 59.123 43.478 0.00 0.00 0.00 3.82
388 396 1.001378 CTTGTTACTTGGTGTGCTGCC 60.001 52.381 0.00 0.00 0.00 4.85
410 418 0.904649 ACTGTGCTGGCATAGTGCTA 59.095 50.000 20.78 0.00 44.65 3.49
416 424 2.668085 GCTGGCATAGTGCTACACAGC 61.668 57.143 12.64 12.64 43.62 4.40
426 434 1.000145 GCTACACAGCGCTACTTTCC 59.000 55.000 10.99 0.00 38.22 3.13
434 444 0.301987 GCGCTACTTTCCGAAGATGC 59.698 55.000 0.00 0.00 36.69 3.91
441 451 4.954092 ACTTTCCGAAGATGCTGAATTC 57.046 40.909 0.00 0.00 36.69 2.17
452 462 4.867047 AGATGCTGAATTCGTGAACTGTAG 59.133 41.667 0.04 0.00 0.00 2.74
493 503 2.831366 GCAGTCATGGGATGCGCAG 61.831 63.158 18.32 0.00 0.00 5.18
530 544 6.531240 TGAATTTCTTTTGCCGATATTGCTTC 59.469 34.615 0.00 0.00 0.00 3.86
536 550 7.168219 TCTTTTGCCGATATTGCTTCCTATAT 58.832 34.615 0.00 0.00 0.00 0.86
537 551 6.985188 TTTGCCGATATTGCTTCCTATATC 57.015 37.500 0.00 0.00 34.73 1.63
554 568 5.573282 CCTATATCGTTGTAAAGATCGCTGG 59.427 44.000 0.00 0.00 0.00 4.85
615 643 3.873361 TGTCATCCTCGCTTTGAATGATC 59.127 43.478 0.00 0.00 0.00 2.92
623 651 5.084818 TCGCTTTGAATGATCTTCCAGTA 57.915 39.130 0.00 0.00 0.00 2.74
625 653 6.115446 TCGCTTTGAATGATCTTCCAGTATT 58.885 36.000 0.00 0.00 0.00 1.89
637 665 9.534565 TGATCTTCCAGTATTAATCTTTTCGAG 57.465 33.333 0.00 0.00 0.00 4.04
676 705 4.782019 TTTCTATCAAATGTGCCCACAC 57.218 40.909 2.82 0.00 45.05 3.82
695 725 2.034053 CACTTTGTGGTTGGTAATGCGT 59.966 45.455 0.00 0.00 0.00 5.24
711 741 4.946784 ATGCGTTATGAACTCTGTTTCC 57.053 40.909 0.00 0.00 0.00 3.13
721 751 7.830099 ATGAACTCTGTTTCCTTCATTTTCT 57.170 32.000 0.00 0.00 30.73 2.52
729 762 6.970484 TGTTTCCTTCATTTTCTGTTCTAGC 58.030 36.000 0.00 0.00 0.00 3.42
746 779 6.070251 TGTTCTAGCAATATTTCCTGTCAGGA 60.070 38.462 18.15 18.15 44.10 3.86
851 884 3.569491 AGTTCATTAATGGGGATGGCTG 58.431 45.455 15.36 0.00 0.00 4.85
853 886 3.228188 TCATTAATGGGGATGGCTGTC 57.772 47.619 15.36 0.00 0.00 3.51
854 887 2.513317 TCATTAATGGGGATGGCTGTCA 59.487 45.455 15.36 0.00 0.00 3.58
902 935 9.508642 TTCAAACCACCACTTCTTTAAATTTTT 57.491 25.926 0.00 0.00 0.00 1.94
921 954 1.061546 TAACTTCCCCCACTCACACC 58.938 55.000 0.00 0.00 0.00 4.16
982 1018 8.659925 TCGTAAGGTGTGTAAACTAAAATTGA 57.340 30.769 0.00 0.00 38.47 2.57
1023 1059 1.890979 CTGCAGGATGGACGGATGC 60.891 63.158 5.57 0.00 35.86 3.91
1123 1159 1.134965 CGGACTCTGAACCAGTCATCC 60.135 57.143 2.46 0.00 41.94 3.51
1287 1324 3.581755 CTGAAACAGTGCATTCCATTGG 58.418 45.455 0.00 0.00 35.64 3.16
1297 1334 3.053019 TGCATTCCATTGGTCCCTTGATA 60.053 43.478 1.86 0.00 0.00 2.15
1335 1373 2.886913 TCATGTTTGATTGCTGGGGAA 58.113 42.857 0.00 0.00 0.00 3.97
1363 1401 4.520492 ACATCATTCACCTTTTCACAGGTC 59.480 41.667 0.00 0.00 44.63 3.85
1372 1410 4.823989 ACCTTTTCACAGGTCTTTGATCTG 59.176 41.667 6.32 6.32 44.63 2.90
1438 1476 2.978156 TCCAAAGGCTCAAGTCCAAT 57.022 45.000 0.00 0.00 0.00 3.16
1769 1818 9.538508 TCTTAATGTGTGATGAATATGTCTCTG 57.461 33.333 0.00 0.00 0.00 3.35
1770 1819 8.667076 TTAATGTGTGATGAATATGTCTCTGG 57.333 34.615 0.00 0.00 0.00 3.86
1800 1849 3.249799 TCATGTTTGCTGTTACTGGAACG 59.750 43.478 0.00 0.00 41.35 3.95
1808 1857 4.449743 TGCTGTTACTGGAACGTTTATGTC 59.550 41.667 0.46 0.00 41.35 3.06
1816 1865 5.160607 TGGAACGTTTATGTCTTCCTGAT 57.839 39.130 0.46 0.00 34.38 2.90
1851 1900 9.439500 GAACATACCAGTACCACAAGTTAATTA 57.561 33.333 0.00 0.00 0.00 1.40
1940 1990 7.826260 TTTTCAGTTTCCTTTGACATGTTTC 57.174 32.000 0.00 0.00 0.00 2.78
1941 1991 5.514274 TCAGTTTCCTTTGACATGTTTCC 57.486 39.130 0.00 0.00 0.00 3.13
1948 1998 7.654022 TTCCTTTGACATGTTTCCTTTTACT 57.346 32.000 0.00 0.00 0.00 2.24
1961 2011 4.624015 TCCTTTTACTTGGTCTGTGTACG 58.376 43.478 0.00 0.00 0.00 3.67
1990 2040 6.079712 AGGCCTGAATTTTCTATACCTTGT 57.920 37.500 3.11 0.00 0.00 3.16
1996 2046 9.025041 CCTGAATTTTCTATACCTTGTTTCCTT 57.975 33.333 0.00 0.00 0.00 3.36
2003 2053 7.979444 TCTATACCTTGTTTCCTTTGTTCAG 57.021 36.000 0.00 0.00 0.00 3.02
2011 2061 4.112634 GTTTCCTTTGTTCAGCAAGGAAC 58.887 43.478 11.99 10.19 45.75 3.62
2014 2064 4.134563 TCCTTTGTTCAGCAAGGAACTAC 58.865 43.478 14.36 0.00 45.74 2.73
2021 2071 5.585445 TGTTCAGCAAGGAACTACGTTTTTA 59.415 36.000 14.36 0.00 45.74 1.52
2088 2138 2.106338 TGACCAAGAGGCAGTGAAATCA 59.894 45.455 0.00 0.00 39.06 2.57
2103 2153 5.191722 AGTGAAATCATTCCTTGGGCTAGTA 59.808 40.000 0.00 0.00 34.49 1.82
2108 2158 4.855340 TCATTCCTTGGGCTAGTAAAAGG 58.145 43.478 11.24 11.24 40.52 3.11
2122 2172 5.635417 AGTAAAAGGAGCAAGAGAAATGC 57.365 39.130 0.00 0.00 44.15 3.56
2169 2220 7.227910 ACCTATAACGTGCTTCTGAAAAGAAAA 59.772 33.333 0.00 0.00 0.00 2.29
2170 2221 8.073768 CCTATAACGTGCTTCTGAAAAGAAAAA 58.926 33.333 0.00 0.00 0.00 1.94
2210 2261 6.183360 CCACTATTCTGATTAACGTGCACATT 60.183 38.462 18.64 11.08 0.00 2.71
2235 2286 3.440872 GGCACCAACGGTTATTTCACATA 59.559 43.478 0.00 0.00 31.02 2.29
2236 2287 4.408694 GCACCAACGGTTATTTCACATAC 58.591 43.478 0.00 0.00 31.02 2.39
2237 2288 4.673320 GCACCAACGGTTATTTCACATACC 60.673 45.833 0.00 0.00 31.02 2.73
2238 2289 4.698304 CACCAACGGTTATTTCACATACCT 59.302 41.667 0.00 0.00 31.02 3.08
2239 2290 4.939439 ACCAACGGTTATTTCACATACCTC 59.061 41.667 0.00 0.00 27.29 3.85
2240 2291 4.938832 CCAACGGTTATTTCACATACCTCA 59.061 41.667 0.00 0.00 0.00 3.86
2241 2292 5.588648 CCAACGGTTATTTCACATACCTCAT 59.411 40.000 0.00 0.00 0.00 2.90
2242 2293 6.094881 CCAACGGTTATTTCACATACCTCATT 59.905 38.462 0.00 0.00 0.00 2.57
2243 2294 6.920569 ACGGTTATTTCACATACCTCATTC 57.079 37.500 0.00 0.00 0.00 2.67
2244 2295 5.820947 ACGGTTATTTCACATACCTCATTCC 59.179 40.000 0.00 0.00 0.00 3.01
2245 2296 5.820423 CGGTTATTTCACATACCTCATTCCA 59.180 40.000 0.00 0.00 0.00 3.53
2246 2297 6.317642 CGGTTATTTCACATACCTCATTCCAA 59.682 38.462 0.00 0.00 0.00 3.53
2247 2298 7.013274 CGGTTATTTCACATACCTCATTCCAAT 59.987 37.037 0.00 0.00 0.00 3.16
2248 2299 8.137437 GGTTATTTCACATACCTCATTCCAATG 58.863 37.037 0.00 0.00 37.75 2.82
2249 2300 8.902806 GTTATTTCACATACCTCATTCCAATGA 58.097 33.333 2.07 2.07 42.78 2.57
2268 2327 7.716998 TCCAATGAACTATTTCTCTATTCCAGC 59.283 37.037 0.00 0.00 32.36 4.85
2281 2340 2.203538 CCAGCTGTTGGCCCAGTT 60.204 61.111 13.81 1.99 40.87 3.16
2284 2343 0.962356 CAGCTGTTGGCCCAGTTAGG 60.962 60.000 5.25 0.00 43.05 2.69
2288 2347 2.711542 CTGTTGGCCCAGTTAGGTTAG 58.288 52.381 0.00 0.00 34.66 2.34
2290 2349 2.444010 TGTTGGCCCAGTTAGGTTAGTT 59.556 45.455 0.00 0.00 34.66 2.24
2294 2353 3.332485 TGGCCCAGTTAGGTTAGTTCATT 59.668 43.478 0.00 0.00 34.66 2.57
2443 2502 3.370315 CCTTAGAGCTGCCTCATTCACTT 60.370 47.826 0.00 0.00 40.68 3.16
2449 2508 2.089201 CTGCCTCATTCACTTCATGCA 58.911 47.619 0.00 0.00 0.00 3.96
2467 2526 1.609580 GCATTCCACCGTGTAACTGGA 60.610 52.381 0.00 0.00 39.17 3.86
2516 2575 8.103948 ACATATTTCTGCTGCTACCATTTATC 57.896 34.615 0.00 0.00 0.00 1.75
2527 2586 7.255139 GCTGCTACCATTTATCGTTAATCCTTT 60.255 37.037 0.00 0.00 0.00 3.11
2697 2756 6.368779 ACTTTAGTATGGGTAAGAGTTGCA 57.631 37.500 0.00 0.00 0.00 4.08
2726 2785 8.707839 GCTTACTGCTTAGCTTATATTTCAGAG 58.292 37.037 5.60 0.00 38.95 3.35
2731 2790 9.539825 CTGCTTAGCTTATATTTCAGAGAAAGA 57.460 33.333 5.60 0.00 0.00 2.52
2875 2962 7.435203 TTTGAATCATGCGAAATTATGAACG 57.565 32.000 0.00 0.00 36.93 3.95
2919 3006 2.306805 AGGAATGGATGCTCAAGTGTCA 59.693 45.455 0.00 0.00 0.00 3.58
3044 3137 6.904463 TTATCCTTTCCTTTGGTTGGTAAC 57.096 37.500 0.00 0.00 0.00 2.50
3067 3160 5.108187 TCAGAAATCAGAATTGCTAGCCT 57.892 39.130 13.29 0.00 28.89 4.58
3169 3262 1.821136 CAAGGATGGTTTGCTCCTTCC 59.179 52.381 15.04 15.04 46.58 3.46
3200 3293 7.041098 CCCATTCCTCTTCAAGGTAATTTATCG 60.041 40.741 0.00 0.00 46.32 2.92
3330 3429 7.130775 TCTGTAGGTAGAGCCCTAATAACTTT 58.869 38.462 0.00 0.00 38.79 2.66
3394 3494 3.712187 TGTATATGACATTTCGCGCTCA 58.288 40.909 5.56 0.58 31.20 4.26
3442 3542 6.349243 TGCAAAGGTGAAGATCATGAAAAT 57.651 33.333 0.00 0.00 0.00 1.82
3557 3660 5.572896 GGCAATTTCAGCAGTATTTGTGTAC 59.427 40.000 0.00 0.00 0.00 2.90
3558 3661 5.283717 GCAATTTCAGCAGTATTTGTGTACG 59.716 40.000 0.00 0.00 0.00 3.67
3601 3704 2.679837 ACATCTTAAATGTCTGCGCCTG 59.320 45.455 4.18 0.00 0.00 4.85
3605 3708 2.394930 TAAATGTCTGCGCCTGCTTA 57.605 45.000 4.18 0.00 43.34 3.09
3707 3810 2.489938 TTGGATTACAGCCAGTGACC 57.510 50.000 0.00 0.00 36.64 4.02
3778 3881 3.134442 TCTGCCTCAATTTGCCAAGTTTT 59.866 39.130 0.00 0.00 0.00 2.43
3849 3952 2.076863 CGTAAGTTCCCCTTCTTGCAG 58.923 52.381 0.00 0.00 34.46 4.41
3862 3967 2.867624 TCTTGCAGAGATGCCTTGTTT 58.132 42.857 0.00 0.00 0.00 2.83
4074 4182 3.404899 GGTTCTTTCACCATTCGGTACA 58.595 45.455 0.00 0.00 46.94 2.90
4075 4183 3.187842 GGTTCTTTCACCATTCGGTACAC 59.812 47.826 0.00 0.00 46.94 2.90
4076 4184 2.679450 TCTTTCACCATTCGGTACACG 58.321 47.619 0.00 0.00 46.94 4.49
4077 4185 1.730064 CTTTCACCATTCGGTACACGG 59.270 52.381 0.00 0.00 46.94 4.94
4082 4190 0.245539 CCATTCGGTACACGGACTGT 59.754 55.000 0.00 0.00 44.45 3.55
4090 4198 3.487042 CGGTACACGGACTGTAGATTCAG 60.487 52.174 0.00 0.00 35.93 3.02
4092 4200 4.637534 GGTACACGGACTGTAGATTCAGTA 59.362 45.833 0.00 0.00 46.81 2.74
4093 4201 5.124457 GGTACACGGACTGTAGATTCAGTAA 59.876 44.000 0.00 0.00 46.81 2.24
4109 4217 1.080772 TAACGCTGGCTGACTGACG 60.081 57.895 0.00 0.00 0.00 4.35
4141 4261 2.532250 TCACTGTCCAGGCTCATAGA 57.468 50.000 0.00 0.00 0.00 1.98
4315 4435 3.487417 TCGAAGAGCGTCGAGGAG 58.513 61.111 9.75 0.00 44.76 3.69
4336 4456 1.522355 CGCGACTCCATCAAGCCAT 60.522 57.895 0.00 0.00 0.00 4.40
4372 4492 2.364842 AGCGACAGCCTGGAGGAT 60.365 61.111 0.00 0.00 46.67 3.24
4481 4601 4.381079 GCTGAGTGATTAGTCGAGGTTTCT 60.381 45.833 0.00 0.00 0.00 2.52
4501 4621 3.932710 TCTGCGACTTGTTGATATGGTTC 59.067 43.478 0.00 0.00 0.00 3.62
4582 4702 0.039911 AGGGAGCAGTCGGTAGTCTT 59.960 55.000 0.00 0.00 0.00 3.01
4596 4716 4.648651 GGTAGTCTTGCTTCCAGGTTTTA 58.351 43.478 0.00 0.00 35.06 1.52
4853 4978 9.911788 AGATTCTTTTCTATCTTAGCCAAATCA 57.088 29.630 0.00 0.00 0.00 2.57
4856 4981 7.974675 TCTTTTCTATCTTAGCCAAATCAACG 58.025 34.615 0.00 0.00 0.00 4.10
4857 4982 6.677781 TTTCTATCTTAGCCAAATCAACGG 57.322 37.500 0.00 0.00 0.00 4.44
4858 4983 5.607939 TCTATCTTAGCCAAATCAACGGA 57.392 39.130 0.00 0.00 0.00 4.69
4859 4984 6.174720 TCTATCTTAGCCAAATCAACGGAT 57.825 37.500 0.00 0.00 34.43 4.18
4860 4985 6.223852 TCTATCTTAGCCAAATCAACGGATC 58.776 40.000 0.00 0.00 31.88 3.36
4861 4986 4.487714 TCTTAGCCAAATCAACGGATCT 57.512 40.909 0.00 0.00 31.88 2.75
4862 4987 4.442706 TCTTAGCCAAATCAACGGATCTC 58.557 43.478 0.00 0.00 31.88 2.75
4863 4988 4.162320 TCTTAGCCAAATCAACGGATCTCT 59.838 41.667 0.00 0.00 31.88 3.10
4864 4989 3.356529 AGCCAAATCAACGGATCTCTT 57.643 42.857 0.00 0.00 31.88 2.85
4865 4990 3.274288 AGCCAAATCAACGGATCTCTTC 58.726 45.455 0.00 0.00 31.88 2.87
4866 4991 3.054802 AGCCAAATCAACGGATCTCTTCT 60.055 43.478 0.00 0.00 31.88 2.85
4867 4992 4.162320 AGCCAAATCAACGGATCTCTTCTA 59.838 41.667 0.00 0.00 31.88 2.10
4868 4993 5.059833 GCCAAATCAACGGATCTCTTCTAT 58.940 41.667 0.00 0.00 31.88 1.98
4869 4994 5.529060 GCCAAATCAACGGATCTCTTCTATT 59.471 40.000 0.00 0.00 31.88 1.73
4870 4995 6.706270 GCCAAATCAACGGATCTCTTCTATTA 59.294 38.462 0.00 0.00 31.88 0.98
4871 4996 7.226720 GCCAAATCAACGGATCTCTTCTATTAA 59.773 37.037 0.00 0.00 31.88 1.40
4872 4997 9.277783 CCAAATCAACGGATCTCTTCTATTAAT 57.722 33.333 0.00 0.00 31.88 1.40
4874 4999 7.897575 ATCAACGGATCTCTTCTATTAATGC 57.102 36.000 0.00 0.00 0.00 3.56
4875 5000 6.816136 TCAACGGATCTCTTCTATTAATGCA 58.184 36.000 0.00 0.00 0.00 3.96
4876 5001 7.272244 TCAACGGATCTCTTCTATTAATGCAA 58.728 34.615 0.00 0.00 0.00 4.08
4877 5002 7.933577 TCAACGGATCTCTTCTATTAATGCAAT 59.066 33.333 0.00 0.00 0.00 3.56
4878 5003 8.562892 CAACGGATCTCTTCTATTAATGCAATT 58.437 33.333 0.00 0.00 41.28 2.32
4879 5004 8.682936 ACGGATCTCTTCTATTAATGCAATTT 57.317 30.769 0.00 0.00 37.87 1.82
4880 5005 8.562892 ACGGATCTCTTCTATTAATGCAATTTG 58.437 33.333 0.00 0.00 37.87 2.32
4881 5006 7.536622 CGGATCTCTTCTATTAATGCAATTTGC 59.463 37.037 14.49 14.49 45.29 3.68
4882 5007 8.574737 GGATCTCTTCTATTAATGCAATTTGCT 58.425 33.333 21.19 5.71 45.31 3.91
4883 5008 9.962783 GATCTCTTCTATTAATGCAATTTGCTT 57.037 29.630 21.19 12.91 45.31 3.91
4887 5012 9.520204 TCTTCTATTAATGCAATTTGCTTTAGC 57.480 29.630 21.19 0.00 45.31 3.09
4929 5054 4.843728 TCCTACCTTAGCCAAATCAACAG 58.156 43.478 0.00 0.00 0.00 3.16
4937 5062 3.883669 AGCCAAATCAACAGATCTCTCC 58.116 45.455 0.00 0.00 0.00 3.71
5070 6812 9.859152 AAATTTTCAGGAAACAAATCCCATTAA 57.141 25.926 0.00 0.00 40.59 1.40
5072 6814 8.845413 TTTTCAGGAAACAAATCCCATTAATG 57.155 30.769 8.58 8.58 40.59 1.90
5073 6815 5.976458 TCAGGAAACAAATCCCATTAATGC 58.024 37.500 10.11 0.00 40.59 3.56
5074 6816 5.483231 TCAGGAAACAAATCCCATTAATGCA 59.517 36.000 10.11 0.00 40.59 3.96
5075 6817 6.013898 TCAGGAAACAAATCCCATTAATGCAA 60.014 34.615 10.11 0.34 40.59 4.08
5076 6818 6.824704 CAGGAAACAAATCCCATTAATGCAAT 59.175 34.615 10.11 2.76 40.59 3.56
5077 6819 7.337436 CAGGAAACAAATCCCATTAATGCAATT 59.663 33.333 10.11 8.49 40.59 2.32
5078 6820 7.889600 AGGAAACAAATCCCATTAATGCAATTT 59.110 29.630 10.11 13.34 40.59 1.82
5079 6821 7.969508 GGAAACAAATCCCATTAATGCAATTTG 59.030 33.333 29.38 29.38 40.32 2.32
5080 6822 6.439675 ACAAATCCCATTAATGCAATTTGC 57.560 33.333 30.10 14.49 45.29 3.68
5081 6823 6.181908 ACAAATCCCATTAATGCAATTTGCT 58.818 32.000 30.10 22.06 45.31 3.91
5082 6824 6.660094 ACAAATCCCATTAATGCAATTTGCTT 59.340 30.769 30.10 20.06 45.31 3.91
5083 6825 7.177041 ACAAATCCCATTAATGCAATTTGCTTT 59.823 29.630 30.10 21.41 45.31 3.51
5084 6826 8.675504 CAAATCCCATTAATGCAATTTGCTTTA 58.324 29.630 25.02 20.48 45.31 1.85
5085 6827 8.441312 AATCCCATTAATGCAATTTGCTTTAG 57.559 30.769 21.19 13.55 45.31 1.85
5086 6828 5.816777 TCCCATTAATGCAATTTGCTTTAGC 59.183 36.000 21.19 0.00 45.31 3.09
5119 6861 7.691993 AATAGATTCTTTCCTACCTTAGCCA 57.308 36.000 0.00 0.00 0.00 4.75
5120 6862 7.691993 ATAGATTCTTTCCTACCTTAGCCAA 57.308 36.000 0.00 0.00 0.00 4.52
5121 6863 6.388619 AGATTCTTTCCTACCTTAGCCAAA 57.611 37.500 0.00 0.00 0.00 3.28
5122 6864 6.974795 AGATTCTTTCCTACCTTAGCCAAAT 58.025 36.000 0.00 0.00 0.00 2.32
5123 6865 7.057264 AGATTCTTTCCTACCTTAGCCAAATC 58.943 38.462 0.00 0.00 0.00 2.17
5124 6866 6.388619 TTCTTTCCTACCTTAGCCAAATCT 57.611 37.500 0.00 0.00 0.00 2.40
5125 6867 7.504926 TTCTTTCCTACCTTAGCCAAATCTA 57.495 36.000 0.00 0.00 0.00 1.98
5126 6868 6.885922 TCTTTCCTACCTTAGCCAAATCTAC 58.114 40.000 0.00 0.00 0.00 2.59
5127 6869 4.931661 TCCTACCTTAGCCAAATCTACG 57.068 45.455 0.00 0.00 0.00 3.51
5128 6870 4.539726 TCCTACCTTAGCCAAATCTACGA 58.460 43.478 0.00 0.00 0.00 3.43
5129 6871 4.957954 TCCTACCTTAGCCAAATCTACGAA 59.042 41.667 0.00 0.00 0.00 3.85
5130 6872 5.422970 TCCTACCTTAGCCAAATCTACGAAA 59.577 40.000 0.00 0.00 0.00 3.46
5131 6873 6.099269 TCCTACCTTAGCCAAATCTACGAAAT 59.901 38.462 0.00 0.00 0.00 2.17
5132 6874 6.424207 CCTACCTTAGCCAAATCTACGAAATC 59.576 42.308 0.00 0.00 0.00 2.17
5133 6875 5.990668 ACCTTAGCCAAATCTACGAAATCT 58.009 37.500 0.00 0.00 0.00 2.40
5134 6876 6.049790 ACCTTAGCCAAATCTACGAAATCTC 58.950 40.000 0.00 0.00 0.00 2.75
5135 6877 6.127026 ACCTTAGCCAAATCTACGAAATCTCT 60.127 38.462 0.00 0.00 0.00 3.10
5136 6878 6.422400 CCTTAGCCAAATCTACGAAATCTCTC 59.578 42.308 0.00 0.00 0.00 3.20
5137 6879 5.606348 AGCCAAATCTACGAAATCTCTCT 57.394 39.130 0.00 0.00 0.00 3.10
5138 6880 5.596845 AGCCAAATCTACGAAATCTCTCTC 58.403 41.667 0.00 0.00 0.00 3.20
5139 6881 5.127845 AGCCAAATCTACGAAATCTCTCTCA 59.872 40.000 0.00 0.00 0.00 3.27
5140 6882 5.988561 GCCAAATCTACGAAATCTCTCTCAT 59.011 40.000 0.00 0.00 0.00 2.90
5141 6883 6.481644 GCCAAATCTACGAAATCTCTCTCATT 59.518 38.462 0.00 0.00 0.00 2.57
5142 6884 7.653713 GCCAAATCTACGAAATCTCTCTCATTA 59.346 37.037 0.00 0.00 0.00 1.90
5143 6885 9.534565 CCAAATCTACGAAATCTCTCTCATTAA 57.465 33.333 0.00 0.00 0.00 1.40
5146 6888 8.755696 ATCTACGAAATCTCTCTCATTAATGC 57.244 34.615 10.76 0.00 0.00 3.56
5147 6889 7.716612 TCTACGAAATCTCTCTCATTAATGCA 58.283 34.615 10.76 0.00 0.00 3.96
5148 6890 8.197439 TCTACGAAATCTCTCTCATTAATGCAA 58.803 33.333 10.76 0.39 0.00 4.08
5149 6891 7.798596 ACGAAATCTCTCTCATTAATGCAAT 57.201 32.000 10.76 0.00 0.00 3.56
5150 6892 8.218338 ACGAAATCTCTCTCATTAATGCAATT 57.782 30.769 10.76 1.85 41.28 2.32
5151 6893 8.680903 ACGAAATCTCTCTCATTAATGCAATTT 58.319 29.630 10.76 9.08 37.87 1.82
5152 6894 8.955002 CGAAATCTCTCTCATTAATGCAATTTG 58.045 33.333 10.76 0.00 37.87 2.32
5153 6895 8.644318 AAATCTCTCTCATTAATGCAATTTGC 57.356 30.769 14.49 14.49 45.29 3.68
5154 6896 7.584122 ATCTCTCTCATTAATGCAATTTGCT 57.416 32.000 21.19 5.71 45.31 3.91
5155 6897 7.400599 TCTCTCTCATTAATGCAATTTGCTT 57.599 32.000 21.19 12.91 45.31 3.91
5156 6898 7.833786 TCTCTCTCATTAATGCAATTTGCTTT 58.166 30.769 21.19 21.41 45.31 3.51
5157 6899 8.959548 TCTCTCTCATTAATGCAATTTGCTTTA 58.040 29.630 21.19 20.48 45.31 1.85
5158 6900 9.234384 CTCTCTCATTAATGCAATTTGCTTTAG 57.766 33.333 21.19 14.43 45.31 1.85
5159 6901 8.192774 TCTCTCATTAATGCAATTTGCTTTAGG 58.807 33.333 21.19 18.17 45.31 2.69
5160 6902 8.065473 TCTCATTAATGCAATTTGCTTTAGGA 57.935 30.769 21.19 20.45 45.31 2.94
5161 6903 8.530311 TCTCATTAATGCAATTTGCTTTAGGAA 58.470 29.630 21.19 12.73 45.31 3.36
5162 6904 9.153721 CTCATTAATGCAATTTGCTTTAGGAAA 57.846 29.630 21.19 12.43 45.31 3.13
5163 6905 8.934825 TCATTAATGCAATTTGCTTTAGGAAAC 58.065 29.630 21.19 0.00 45.31 2.78
5164 6906 8.719648 CATTAATGCAATTTGCTTTAGGAAACA 58.280 29.630 21.19 10.08 45.31 2.83
5165 6907 8.668510 TTAATGCAATTTGCTTTAGGAAACAA 57.331 26.923 21.19 8.47 45.31 2.83
5166 6908 7.565323 AATGCAATTTGCTTTAGGAAACAAA 57.435 28.000 21.19 0.00 45.31 2.83
5167 6909 7.748691 ATGCAATTTGCTTTAGGAAACAAAT 57.251 28.000 21.19 0.16 45.31 2.32
5168 6910 8.845413 ATGCAATTTGCTTTAGGAAACAAATA 57.155 26.923 21.19 0.00 45.31 1.40
5169 6911 8.668510 TGCAATTTGCTTTAGGAAACAAATAA 57.331 26.923 21.19 0.00 45.31 1.40
5170 6912 9.282569 TGCAATTTGCTTTAGGAAACAAATAAT 57.717 25.926 21.19 0.00 45.31 1.28
5401 7147 4.225942 AGATCAGAACTTTCCATACTGGCA 59.774 41.667 0.00 0.00 37.47 4.92
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.008712 ACCAGTTCATCTTCTTCGGAAAAAC 59.991 40.000 0.00 0.00 33.12 2.43
7 8 3.849911 TGCTACCAGTTCATCTTCTTCG 58.150 45.455 0.00 0.00 0.00 3.79
8 9 4.505922 CGATGCTACCAGTTCATCTTCTTC 59.494 45.833 9.52 0.00 35.64 2.87
9 10 4.081420 ACGATGCTACCAGTTCATCTTCTT 60.081 41.667 0.00 0.00 35.64 2.52
10 11 3.449018 ACGATGCTACCAGTTCATCTTCT 59.551 43.478 0.00 0.00 35.64 2.85
11 12 3.786635 ACGATGCTACCAGTTCATCTTC 58.213 45.455 0.00 0.00 35.64 2.87
12 13 3.735208 CGACGATGCTACCAGTTCATCTT 60.735 47.826 0.00 2.96 35.64 2.40
13 14 2.223595 CGACGATGCTACCAGTTCATCT 60.224 50.000 0.00 1.00 35.64 2.90
14 15 2.120232 CGACGATGCTACCAGTTCATC 58.880 52.381 0.00 0.00 34.74 2.92
15 16 1.802880 GCGACGATGCTACCAGTTCAT 60.803 52.381 0.00 0.00 0.00 2.57
16 17 0.457853 GCGACGATGCTACCAGTTCA 60.458 55.000 0.00 0.00 0.00 3.18
17 18 1.472276 CGCGACGATGCTACCAGTTC 61.472 60.000 0.00 0.00 0.00 3.01
18 19 1.516386 CGCGACGATGCTACCAGTT 60.516 57.895 0.00 0.00 0.00 3.16
19 20 2.102357 CGCGACGATGCTACCAGT 59.898 61.111 0.00 0.00 0.00 4.00
20 21 2.655364 CCGCGACGATGCTACCAG 60.655 66.667 8.23 0.00 0.00 4.00
21 22 4.865761 GCCGCGACGATGCTACCA 62.866 66.667 8.23 0.00 0.00 3.25
27 28 3.210419 GATTTCCGCCGCGACGATG 62.210 63.158 18.64 0.00 34.06 3.84
28 29 2.960129 GATTTCCGCCGCGACGAT 60.960 61.111 18.64 0.78 34.06 3.73
29 30 4.423022 TGATTTCCGCCGCGACGA 62.423 61.111 18.64 0.15 34.06 4.20
30 31 4.204891 GTGATTTCCGCCGCGACG 62.205 66.667 15.93 8.21 0.00 5.12
31 32 2.292802 GAAGTGATTTCCGCCGCGAC 62.293 60.000 15.93 2.84 0.00 5.19
32 33 2.047655 AAGTGATTTCCGCCGCGA 60.048 55.556 15.93 0.00 0.00 5.87
33 34 2.399611 GAAGTGATTTCCGCCGCG 59.600 61.111 5.59 5.59 0.00 6.46
34 35 2.791927 GGAAGTGATTTCCGCCGC 59.208 61.111 0.00 0.00 45.64 6.53
40 41 5.293079 CAGAAGAAGGATCGGAAGTGATTTC 59.707 44.000 0.00 0.00 34.93 2.17
41 42 5.181748 CAGAAGAAGGATCGGAAGTGATTT 58.818 41.667 0.00 0.00 0.00 2.17
42 43 4.223923 ACAGAAGAAGGATCGGAAGTGATT 59.776 41.667 0.00 0.00 0.00 2.57
43 44 3.772025 ACAGAAGAAGGATCGGAAGTGAT 59.228 43.478 0.00 0.00 0.00 3.06
44 45 3.165875 ACAGAAGAAGGATCGGAAGTGA 58.834 45.455 0.00 0.00 0.00 3.41
45 46 3.601443 ACAGAAGAAGGATCGGAAGTG 57.399 47.619 0.00 0.00 0.00 3.16
46 47 4.345854 AGTACAGAAGAAGGATCGGAAGT 58.654 43.478 0.00 0.00 0.00 3.01
47 48 4.202070 GGAGTACAGAAGAAGGATCGGAAG 60.202 50.000 0.00 0.00 0.00 3.46
48 49 3.700038 GGAGTACAGAAGAAGGATCGGAA 59.300 47.826 0.00 0.00 0.00 4.30
49 50 3.288964 GGAGTACAGAAGAAGGATCGGA 58.711 50.000 0.00 0.00 0.00 4.55
50 51 2.362717 GGGAGTACAGAAGAAGGATCGG 59.637 54.545 0.00 0.00 0.00 4.18
51 52 3.292460 AGGGAGTACAGAAGAAGGATCG 58.708 50.000 0.00 0.00 0.00 3.69
52 53 3.639561 GGAGGGAGTACAGAAGAAGGATC 59.360 52.174 0.00 0.00 0.00 3.36
53 54 3.648739 GGAGGGAGTACAGAAGAAGGAT 58.351 50.000 0.00 0.00 0.00 3.24
54 55 2.620886 CGGAGGGAGTACAGAAGAAGGA 60.621 54.545 0.00 0.00 0.00 3.36
55 56 1.751924 CGGAGGGAGTACAGAAGAAGG 59.248 57.143 0.00 0.00 0.00 3.46
56 57 2.448453 ACGGAGGGAGTACAGAAGAAG 58.552 52.381 0.00 0.00 0.00 2.85
57 58 2.599408 ACGGAGGGAGTACAGAAGAA 57.401 50.000 0.00 0.00 0.00 2.52
58 59 2.444421 GAACGGAGGGAGTACAGAAGA 58.556 52.381 0.00 0.00 0.00 2.87
59 60 1.477295 GGAACGGAGGGAGTACAGAAG 59.523 57.143 0.00 0.00 0.00 2.85
60 61 1.076677 AGGAACGGAGGGAGTACAGAA 59.923 52.381 0.00 0.00 0.00 3.02
61 62 0.702902 AGGAACGGAGGGAGTACAGA 59.297 55.000 0.00 0.00 0.00 3.41
62 63 2.431954 TAGGAACGGAGGGAGTACAG 57.568 55.000 0.00 0.00 0.00 2.74
63 64 2.905415 TTAGGAACGGAGGGAGTACA 57.095 50.000 0.00 0.00 0.00 2.90
64 65 4.892345 AGTATTTAGGAACGGAGGGAGTAC 59.108 45.833 0.00 0.00 0.00 2.73
65 66 5.134725 AGTATTTAGGAACGGAGGGAGTA 57.865 43.478 0.00 0.00 0.00 2.59
66 67 3.991683 AGTATTTAGGAACGGAGGGAGT 58.008 45.455 0.00 0.00 0.00 3.85
67 68 4.161754 ACAAGTATTTAGGAACGGAGGGAG 59.838 45.833 0.00 0.00 0.00 4.30
68 69 4.098894 ACAAGTATTTAGGAACGGAGGGA 58.901 43.478 0.00 0.00 0.00 4.20
69 70 4.161754 AGACAAGTATTTAGGAACGGAGGG 59.838 45.833 0.00 0.00 0.00 4.30
70 71 5.340439 AGACAAGTATTTAGGAACGGAGG 57.660 43.478 0.00 0.00 0.00 4.30
71 72 7.097834 AGAAAGACAAGTATTTAGGAACGGAG 58.902 38.462 0.00 0.00 0.00 4.63
72 73 7.001099 AGAAAGACAAGTATTTAGGAACGGA 57.999 36.000 0.00 0.00 0.00 4.69
73 74 7.491696 CCTAGAAAGACAAGTATTTAGGAACGG 59.508 40.741 4.01 0.00 26.70 4.44
74 75 7.010275 GCCTAGAAAGACAAGTATTTAGGAACG 59.990 40.741 11.40 0.00 26.70 3.95
75 76 7.822822 TGCCTAGAAAGACAAGTATTTAGGAAC 59.177 37.037 11.40 0.00 26.70 3.62
76 77 7.913789 TGCCTAGAAAGACAAGTATTTAGGAA 58.086 34.615 11.40 1.02 26.70 3.36
77 78 7.490657 TGCCTAGAAAGACAAGTATTTAGGA 57.509 36.000 11.40 0.00 26.70 2.94
78 79 8.738645 AATGCCTAGAAAGACAAGTATTTAGG 57.261 34.615 5.26 5.26 0.00 2.69
80 81 9.733556 TGAAATGCCTAGAAAGACAAGTATTTA 57.266 29.630 0.00 0.00 0.00 1.40
81 82 8.635765 TGAAATGCCTAGAAAGACAAGTATTT 57.364 30.769 0.00 0.00 0.00 1.40
82 83 8.515414 GTTGAAATGCCTAGAAAGACAAGTATT 58.485 33.333 0.00 0.00 0.00 1.89
83 84 7.665559 TGTTGAAATGCCTAGAAAGACAAGTAT 59.334 33.333 0.00 0.00 0.00 2.12
84 85 6.995686 TGTTGAAATGCCTAGAAAGACAAGTA 59.004 34.615 0.00 0.00 0.00 2.24
85 86 5.827797 TGTTGAAATGCCTAGAAAGACAAGT 59.172 36.000 0.00 0.00 0.00 3.16
86 87 6.317789 TGTTGAAATGCCTAGAAAGACAAG 57.682 37.500 0.00 0.00 0.00 3.16
87 88 6.321181 ACTTGTTGAAATGCCTAGAAAGACAA 59.679 34.615 0.00 0.00 0.00 3.18
88 89 5.827797 ACTTGTTGAAATGCCTAGAAAGACA 59.172 36.000 0.00 0.00 0.00 3.41
89 90 6.017109 TCACTTGTTGAAATGCCTAGAAAGAC 60.017 38.462 0.00 0.00 0.00 3.01
90 91 6.017109 GTCACTTGTTGAAATGCCTAGAAAGA 60.017 38.462 0.00 0.00 35.39 2.52
91 92 6.016777 AGTCACTTGTTGAAATGCCTAGAAAG 60.017 38.462 0.00 0.00 35.39 2.62
92 93 5.827797 AGTCACTTGTTGAAATGCCTAGAAA 59.172 36.000 0.00 0.00 35.39 2.52
93 94 5.376625 AGTCACTTGTTGAAATGCCTAGAA 58.623 37.500 0.00 0.00 35.39 2.10
94 95 4.973168 AGTCACTTGTTGAAATGCCTAGA 58.027 39.130 0.00 0.00 35.39 2.43
95 96 5.700832 TGTAGTCACTTGTTGAAATGCCTAG 59.299 40.000 0.00 0.00 35.39 3.02
96 97 5.616270 TGTAGTCACTTGTTGAAATGCCTA 58.384 37.500 0.00 0.00 35.39 3.93
97 98 4.460263 TGTAGTCACTTGTTGAAATGCCT 58.540 39.130 0.00 0.00 35.39 4.75
98 99 4.829064 TGTAGTCACTTGTTGAAATGCC 57.171 40.909 0.00 0.00 35.39 4.40
99 100 6.015504 CGTATGTAGTCACTTGTTGAAATGC 58.984 40.000 0.00 0.00 35.39 3.56
100 101 6.015504 GCGTATGTAGTCACTTGTTGAAATG 58.984 40.000 0.00 0.00 35.39 2.32
101 102 5.699001 TGCGTATGTAGTCACTTGTTGAAAT 59.301 36.000 0.00 0.00 35.39 2.17
102 103 5.051153 TGCGTATGTAGTCACTTGTTGAAA 58.949 37.500 0.00 0.00 35.39 2.69
103 104 4.623002 TGCGTATGTAGTCACTTGTTGAA 58.377 39.130 0.00 0.00 35.39 2.69
104 105 4.245845 TGCGTATGTAGTCACTTGTTGA 57.754 40.909 0.00 0.00 0.00 3.18
105 106 4.983215 TTGCGTATGTAGTCACTTGTTG 57.017 40.909 0.00 0.00 0.00 3.33
106 107 5.994887 TTTTGCGTATGTAGTCACTTGTT 57.005 34.783 0.00 0.00 0.00 2.83
107 108 5.699001 TCATTTTGCGTATGTAGTCACTTGT 59.301 36.000 0.00 0.00 0.00 3.16
108 109 6.128553 ACTCATTTTGCGTATGTAGTCACTTG 60.129 38.462 0.00 0.00 0.00 3.16
109 110 5.932303 ACTCATTTTGCGTATGTAGTCACTT 59.068 36.000 0.00 0.00 0.00 3.16
110 111 5.348724 CACTCATTTTGCGTATGTAGTCACT 59.651 40.000 0.00 0.00 0.00 3.41
111 112 5.347635 TCACTCATTTTGCGTATGTAGTCAC 59.652 40.000 0.00 0.00 0.00 3.67
112 113 5.474825 TCACTCATTTTGCGTATGTAGTCA 58.525 37.500 0.00 0.00 0.00 3.41
113 114 6.403333 TTCACTCATTTTGCGTATGTAGTC 57.597 37.500 0.00 0.00 0.00 2.59
114 115 6.818644 AGATTCACTCATTTTGCGTATGTAGT 59.181 34.615 0.00 0.00 0.00 2.73
115 116 7.239166 AGATTCACTCATTTTGCGTATGTAG 57.761 36.000 0.00 0.00 0.00 2.74
116 117 7.043656 CGTAGATTCACTCATTTTGCGTATGTA 60.044 37.037 0.00 0.00 0.00 2.29
117 118 6.237835 CGTAGATTCACTCATTTTGCGTATGT 60.238 38.462 0.00 0.00 0.00 2.29
118 119 6.122782 CGTAGATTCACTCATTTTGCGTATG 58.877 40.000 0.00 0.00 0.00 2.39
119 120 5.276868 GCGTAGATTCACTCATTTTGCGTAT 60.277 40.000 0.00 0.00 0.00 3.06
120 121 4.032445 GCGTAGATTCACTCATTTTGCGTA 59.968 41.667 0.00 0.00 0.00 4.42
121 122 3.181520 GCGTAGATTCACTCATTTTGCGT 60.182 43.478 0.00 0.00 0.00 5.24
122 123 3.062639 AGCGTAGATTCACTCATTTTGCG 59.937 43.478 0.00 0.00 0.00 4.85
123 124 4.331168 AGAGCGTAGATTCACTCATTTTGC 59.669 41.667 0.00 0.00 0.00 3.68
124 125 7.525688 TTAGAGCGTAGATTCACTCATTTTG 57.474 36.000 0.00 0.00 0.00 2.44
125 126 8.547967 TTTTAGAGCGTAGATTCACTCATTTT 57.452 30.769 0.00 0.00 0.00 1.82
126 127 8.723942 ATTTTAGAGCGTAGATTCACTCATTT 57.276 30.769 0.00 0.00 0.00 2.32
127 128 9.988815 ATATTTTAGAGCGTAGATTCACTCATT 57.011 29.630 0.00 0.00 0.00 2.57
128 129 9.416794 CATATTTTAGAGCGTAGATTCACTCAT 57.583 33.333 0.00 0.00 0.00 2.90
129 130 8.414003 ACATATTTTAGAGCGTAGATTCACTCA 58.586 33.333 0.00 0.00 0.00 3.41
130 131 8.804688 ACATATTTTAGAGCGTAGATTCACTC 57.195 34.615 0.00 0.00 0.00 3.51
131 132 8.634444 AGACATATTTTAGAGCGTAGATTCACT 58.366 33.333 0.00 0.00 0.00 3.41
132 133 8.804688 AGACATATTTTAGAGCGTAGATTCAC 57.195 34.615 0.00 0.00 0.00 3.18
133 134 9.894783 GTAGACATATTTTAGAGCGTAGATTCA 57.105 33.333 0.00 0.00 0.00 2.57
134 135 9.894783 TGTAGACATATTTTAGAGCGTAGATTC 57.105 33.333 0.00 0.00 0.00 2.52
198 199 9.780186 CCTCCGTTCCTAAATATTTATCTTTCT 57.220 33.333 8.34 0.00 0.00 2.52
199 200 9.000486 CCCTCCGTTCCTAAATATTTATCTTTC 58.000 37.037 8.34 0.00 0.00 2.62
200 201 8.720537 TCCCTCCGTTCCTAAATATTTATCTTT 58.279 33.333 8.34 0.00 0.00 2.52
201 202 8.271398 TCCCTCCGTTCCTAAATATTTATCTT 57.729 34.615 8.34 0.00 0.00 2.40
202 203 7.513091 ACTCCCTCCGTTCCTAAATATTTATCT 59.487 37.037 8.34 0.00 0.00 1.98
203 204 7.677892 ACTCCCTCCGTTCCTAAATATTTATC 58.322 38.462 8.34 0.61 0.00 1.75
204 205 7.628501 ACTCCCTCCGTTCCTAAATATTTAT 57.371 36.000 8.34 0.00 0.00 1.40
205 206 7.786464 ACTACTCCCTCCGTTCCTAAATATTTA 59.214 37.037 7.66 7.66 0.00 1.40
206 207 5.970501 ACTCCCTCCGTTCCTAAATATTT 57.029 39.130 5.89 5.89 0.00 1.40
207 208 6.141790 ACTACTCCCTCCGTTCCTAAATATT 58.858 40.000 0.00 0.00 0.00 1.28
208 209 5.713807 ACTACTCCCTCCGTTCCTAAATAT 58.286 41.667 0.00 0.00 0.00 1.28
209 210 5.134725 ACTACTCCCTCCGTTCCTAAATA 57.865 43.478 0.00 0.00 0.00 1.40
210 211 3.991683 ACTACTCCCTCCGTTCCTAAAT 58.008 45.455 0.00 0.00 0.00 1.40
211 212 3.463048 ACTACTCCCTCCGTTCCTAAA 57.537 47.619 0.00 0.00 0.00 1.85
212 213 4.591321 TTACTACTCCCTCCGTTCCTAA 57.409 45.455 0.00 0.00 0.00 2.69
213 214 4.591321 TTTACTACTCCCTCCGTTCCTA 57.409 45.455 0.00 0.00 0.00 2.94
214 215 3.463048 TTTACTACTCCCTCCGTTCCT 57.537 47.619 0.00 0.00 0.00 3.36
215 216 5.859205 TTATTTACTACTCCCTCCGTTCC 57.141 43.478 0.00 0.00 0.00 3.62
216 217 7.945134 TGTATTATTTACTACTCCCTCCGTTC 58.055 38.462 0.00 0.00 0.00 3.95
217 218 7.562821 ACTGTATTATTTACTACTCCCTCCGTT 59.437 37.037 0.00 0.00 0.00 4.44
218 219 7.065504 ACTGTATTATTTACTACTCCCTCCGT 58.934 38.462 0.00 0.00 0.00 4.69
219 220 7.521871 ACTGTATTATTTACTACTCCCTCCG 57.478 40.000 0.00 0.00 0.00 4.63
232 233 9.687210 GTCCCGAAAAGAAAAACTGTATTATTT 57.313 29.630 0.00 0.00 0.00 1.40
233 234 9.074576 AGTCCCGAAAAGAAAAACTGTATTATT 57.925 29.630 0.00 0.00 0.00 1.40
234 235 8.631480 AGTCCCGAAAAGAAAAACTGTATTAT 57.369 30.769 0.00 0.00 0.00 1.28
235 236 9.211485 CTAGTCCCGAAAAGAAAAACTGTATTA 57.789 33.333 0.00 0.00 0.00 0.98
236 237 6.954487 AGTCCCGAAAAGAAAAACTGTATT 57.046 33.333 0.00 0.00 0.00 1.89
237 238 7.222161 ACTAGTCCCGAAAAGAAAAACTGTAT 58.778 34.615 0.00 0.00 0.00 2.29
238 239 6.585416 ACTAGTCCCGAAAAGAAAAACTGTA 58.415 36.000 0.00 0.00 0.00 2.74
239 240 5.434408 ACTAGTCCCGAAAAGAAAAACTGT 58.566 37.500 0.00 0.00 0.00 3.55
240 241 7.668525 ATACTAGTCCCGAAAAGAAAAACTG 57.331 36.000 0.00 0.00 0.00 3.16
241 242 9.955102 ATTATACTAGTCCCGAAAAGAAAAACT 57.045 29.630 0.00 0.00 0.00 2.66
258 259 7.876068 TGCTTTTCCCCAACGATATTATACTAG 59.124 37.037 0.00 0.00 0.00 2.57
259 260 7.737869 TGCTTTTCCCCAACGATATTATACTA 58.262 34.615 0.00 0.00 0.00 1.82
286 287 2.359478 AACTAAACAGGGGGCGCG 60.359 61.111 0.00 0.00 0.00 6.86
287 288 1.176619 AACAACTAAACAGGGGGCGC 61.177 55.000 0.00 0.00 0.00 6.53
288 289 0.879090 GAACAACTAAACAGGGGGCG 59.121 55.000 0.00 0.00 0.00 6.13
307 308 3.365265 GCGGGTGCAGAACTTGGG 61.365 66.667 0.00 0.00 42.15 4.12
321 322 2.202388 CGCATGCACAAGAAGCGG 60.202 61.111 19.57 0.00 44.20 5.52
347 348 6.127897 ACAAGAAGCAGAATAAAGTATGGCAC 60.128 38.462 0.00 0.00 0.00 5.01
361 362 3.876914 CACACCAAGTAACAAGAAGCAGA 59.123 43.478 0.00 0.00 0.00 4.26
362 363 3.548818 GCACACCAAGTAACAAGAAGCAG 60.549 47.826 0.00 0.00 0.00 4.24
410 418 0.032952 TTCGGAAAGTAGCGCTGTGT 59.967 50.000 22.90 1.12 0.00 3.72
416 424 1.590238 CAGCATCTTCGGAAAGTAGCG 59.410 52.381 0.00 0.00 37.95 4.26
418 426 5.276584 CGAATTCAGCATCTTCGGAAAGTAG 60.277 44.000 6.22 0.00 38.41 2.57
421 429 3.372206 ACGAATTCAGCATCTTCGGAAAG 59.628 43.478 6.22 0.00 44.44 2.62
426 434 3.369147 AGTTCACGAATTCAGCATCTTCG 59.631 43.478 6.22 8.53 45.35 3.79
434 444 3.325870 TGCCTACAGTTCACGAATTCAG 58.674 45.455 6.22 1.11 0.00 3.02
452 462 1.541379 AAATTCCCGTTACCACTGCC 58.459 50.000 0.00 0.00 0.00 4.85
456 466 2.034812 TGCACAAAATTCCCGTTACCAC 59.965 45.455 0.00 0.00 0.00 4.16
493 503 7.332678 GGCAAAAGAAATTCATATGCATATCCC 59.667 37.037 16.46 3.01 34.14 3.85
530 544 5.573282 CCAGCGATCTTTACAACGATATAGG 59.427 44.000 0.00 0.00 0.00 2.57
536 550 1.274167 ACCCAGCGATCTTTACAACGA 59.726 47.619 0.00 0.00 0.00 3.85
537 551 1.722011 ACCCAGCGATCTTTACAACG 58.278 50.000 0.00 0.00 0.00 4.10
554 568 4.664150 TGAAAATGACACCTTTCCAACC 57.336 40.909 8.61 0.00 31.75 3.77
592 619 3.002791 TCATTCAAAGCGAGGATGACAC 58.997 45.455 0.00 0.00 0.00 3.67
637 665 9.961265 TGATAGAAAAATCATCTCAATGCAATC 57.039 29.630 0.00 0.00 30.92 2.67
676 705 3.363341 AACGCATTACCAACCACAAAG 57.637 42.857 0.00 0.00 0.00 2.77
695 725 9.354673 AGAAAATGAAGGAAACAGAGTTCATAA 57.645 29.630 0.00 0.00 38.42 1.90
721 751 6.070251 TCCTGACAGGAAATATTGCTAGAACA 60.070 38.462 22.30 0.00 42.51 3.18
746 779 9.979578 TGATGCAAAGTCAATTAAGTGTAATTT 57.020 25.926 2.43 0.74 37.75 1.82
902 935 1.061546 GGTGTGAGTGGGGGAAGTTA 58.938 55.000 0.00 0.00 0.00 2.24
921 954 4.106197 GCAATCTACCACTCGTTCTACAG 58.894 47.826 0.00 0.00 0.00 2.74
982 1018 2.158711 CCATCCTGCACATCATGGTAGT 60.159 50.000 0.00 0.00 32.49 2.73
1023 1059 2.482721 AGAACCGTTAGAACCAATTGCG 59.517 45.455 0.00 0.00 0.00 4.85
1089 1125 4.951715 TCAGAGTCCGGCTTTAGTATGTAA 59.048 41.667 0.00 0.00 0.00 2.41
1123 1159 3.928727 ACAAGATGGTGCATTGTCAAG 57.071 42.857 0.00 0.00 31.72 3.02
1128 1164 0.452987 CGGGACAAGATGGTGCATTG 59.547 55.000 0.00 0.00 0.00 2.82
1257 1294 1.875514 GCACTGTTTCAGCATCACAGA 59.124 47.619 11.10 0.00 40.43 3.41
1287 1324 3.702045 AGAGCTACTGTGTATCAAGGGAC 59.298 47.826 0.00 0.00 0.00 4.46
1297 1334 7.986085 AACATGATTTAAAGAGCTACTGTGT 57.014 32.000 0.00 0.00 0.00 3.72
1335 1373 8.090214 CCTGTGAAAAGGTGAATGATGTAAATT 58.910 33.333 0.00 0.00 32.17 1.82
1363 1401 3.118811 GGGACTCCTCAGACAGATCAAAG 60.119 52.174 0.00 0.00 0.00 2.77
1372 1410 0.251832 TGTCAGGGGACTCCTCAGAC 60.252 60.000 12.62 12.62 46.12 3.51
1378 1416 4.234673 ACCTTGTCAGGGGACTCC 57.765 61.111 5.89 0.00 46.01 3.85
1438 1476 4.350368 TTGAATAGCAAGAGTGTCACCA 57.650 40.909 0.00 0.00 31.55 4.17
1445 1483 7.148272 GCTCTTCTCAATTTGAATAGCAAGAGT 60.148 37.037 19.80 0.00 40.79 3.24
1518 1556 5.351458 ACAAAGAAACAGGACATGCTTTTC 58.649 37.500 0.00 0.00 0.00 2.29
1524 1562 5.297776 AGTTCAGACAAAGAAACAGGACATG 59.702 40.000 0.00 0.00 0.00 3.21
1742 1791 9.539825 AGAGACATATTCATCACACATTAAGAC 57.460 33.333 0.00 0.00 0.00 3.01
1769 1818 5.376854 AACAGCAAACATGAAGTACATCC 57.623 39.130 0.00 0.00 37.07 3.51
1770 1819 7.017645 CAGTAACAGCAAACATGAAGTACATC 58.982 38.462 0.00 0.00 37.07 3.06
1808 1857 8.792633 TGGTATGTTCTTTTGTTTATCAGGAAG 58.207 33.333 0.00 0.00 0.00 3.46
1816 1865 7.774157 TGTGGTACTGGTATGTTCTTTTGTTTA 59.226 33.333 0.00 0.00 0.00 2.01
1915 1965 7.333174 GGAAACATGTCAAAGGAAACTGAAAAA 59.667 33.333 0.00 0.00 42.68 1.94
1916 1966 6.816140 GGAAACATGTCAAAGGAAACTGAAAA 59.184 34.615 0.00 0.00 42.68 2.29
1917 1967 6.154363 AGGAAACATGTCAAAGGAAACTGAAA 59.846 34.615 0.00 0.00 42.68 2.69
1918 1968 5.656416 AGGAAACATGTCAAAGGAAACTGAA 59.344 36.000 0.00 0.00 42.68 3.02
1939 1989 4.501915 CCGTACACAGACCAAGTAAAAGGA 60.502 45.833 0.00 0.00 0.00 3.36
1940 1990 3.744426 CCGTACACAGACCAAGTAAAAGG 59.256 47.826 0.00 0.00 0.00 3.11
1941 1991 4.210537 CACCGTACACAGACCAAGTAAAAG 59.789 45.833 0.00 0.00 0.00 2.27
1948 1998 0.178301 TTGCACCGTACACAGACCAA 59.822 50.000 0.00 0.00 0.00 3.67
1961 2011 1.620323 AGAAAATTCAGGCCTTGCACC 59.380 47.619 0.00 0.00 0.00 5.01
1990 2040 4.023291 AGTTCCTTGCTGAACAAAGGAAA 58.977 39.130 16.29 1.63 45.62 3.13
1996 2046 3.188159 ACGTAGTTCCTTGCTGAACAA 57.812 42.857 13.99 0.00 45.62 2.83
1997 2047 2.902705 ACGTAGTTCCTTGCTGAACA 57.097 45.000 13.99 0.00 45.62 3.18
2021 2071 9.643693 CCTGCAGTTCAAGTTAAAATGAATATT 57.356 29.630 13.81 0.00 37.82 1.28
2088 2138 4.628959 GCTCCTTTTACTAGCCCAAGGAAT 60.629 45.833 14.83 0.00 43.39 3.01
2103 2153 2.352127 GCGCATTTCTCTTGCTCCTTTT 60.352 45.455 0.30 0.00 37.96 2.27
2108 2158 2.159476 TCAATGCGCATTTCTCTTGCTC 60.159 45.455 32.13 0.00 37.96 4.26
2122 2172 4.449068 GGTGAGACAATACCTATCAATGCG 59.551 45.833 0.00 0.00 34.11 4.73
2179 2230 8.609176 GCACGTTAATCAGAATAGTGGAATTAA 58.391 33.333 0.00 0.00 0.00 1.40
2180 2231 7.766738 TGCACGTTAATCAGAATAGTGGAATTA 59.233 33.333 0.00 0.00 0.00 1.40
2181 2232 6.597672 TGCACGTTAATCAGAATAGTGGAATT 59.402 34.615 0.00 0.00 0.00 2.17
2182 2233 6.037172 GTGCACGTTAATCAGAATAGTGGAAT 59.963 38.462 0.00 0.00 30.91 3.01
2183 2234 5.350365 GTGCACGTTAATCAGAATAGTGGAA 59.650 40.000 0.00 0.00 30.91 3.53
2184 2235 4.868171 GTGCACGTTAATCAGAATAGTGGA 59.132 41.667 0.00 0.00 0.00 4.02
2185 2236 4.629634 TGTGCACGTTAATCAGAATAGTGG 59.370 41.667 13.13 0.00 0.00 4.00
2186 2237 5.778161 TGTGCACGTTAATCAGAATAGTG 57.222 39.130 13.13 0.00 0.00 2.74
2187 2238 6.985188 AATGTGCACGTTAATCAGAATAGT 57.015 33.333 22.61 0.00 0.00 2.12
2188 2239 7.218773 CCAAAATGTGCACGTTAATCAGAATAG 59.781 37.037 24.02 3.88 0.00 1.73
2189 2240 7.026562 CCAAAATGTGCACGTTAATCAGAATA 58.973 34.615 24.02 0.00 0.00 1.75
2210 2261 2.693591 TGAAATAACCGTTGGTGCCAAA 59.306 40.909 5.09 0.00 37.70 3.28
2235 2286 7.637511 AGAGAAATAGTTCATTGGAATGAGGT 58.362 34.615 5.62 0.00 45.35 3.85
2236 2287 9.790344 ATAGAGAAATAGTTCATTGGAATGAGG 57.210 33.333 5.62 0.00 45.35 3.86
2241 2292 9.618890 CTGGAATAGAGAAATAGTTCATTGGAA 57.381 33.333 5.62 0.00 36.09 3.53
2242 2293 7.716998 GCTGGAATAGAGAAATAGTTCATTGGA 59.283 37.037 5.62 0.00 36.09 3.53
2243 2294 7.718753 AGCTGGAATAGAGAAATAGTTCATTGG 59.281 37.037 5.62 0.00 36.09 3.16
2244 2295 8.557864 CAGCTGGAATAGAGAAATAGTTCATTG 58.442 37.037 5.57 0.00 36.09 2.82
2245 2296 8.270744 ACAGCTGGAATAGAGAAATAGTTCATT 58.729 33.333 19.93 0.00 36.09 2.57
2246 2297 7.800092 ACAGCTGGAATAGAGAAATAGTTCAT 58.200 34.615 19.93 0.00 36.09 2.57
2247 2298 7.187824 ACAGCTGGAATAGAGAAATAGTTCA 57.812 36.000 19.93 0.00 36.09 3.18
2248 2299 7.914465 CAACAGCTGGAATAGAGAAATAGTTC 58.086 38.462 19.93 0.00 0.00 3.01
2249 2300 7.856145 CAACAGCTGGAATAGAGAAATAGTT 57.144 36.000 19.93 0.00 0.00 2.24
2268 2327 2.039879 ACTAACCTAACTGGGCCAACAG 59.960 50.000 8.04 6.23 44.03 3.16
2274 2333 5.742063 ACTAATGAACTAACCTAACTGGGC 58.258 41.667 0.00 0.00 41.11 5.36
2294 2353 9.944376 AAGCAGAATAGAGAACATGTTTTACTA 57.056 29.630 13.36 15.44 0.00 1.82
2333 2392 8.621532 AAACAGTAAAGTGCATCTAGATTGAA 57.378 30.769 1.33 0.00 0.00 2.69
2389 2448 0.401738 CACATGGACCTTCCTGTGGT 59.598 55.000 13.04 0.00 39.65 4.16
2443 2502 2.080693 GTTACACGGTGGAATGCATGA 58.919 47.619 9.37 0.00 0.00 3.07
2449 2508 2.093128 GGATCCAGTTACACGGTGGAAT 60.093 50.000 9.37 0.00 43.59 3.01
2467 2526 1.487976 ACCACATTGAGCTCATCGGAT 59.512 47.619 19.04 4.86 0.00 4.18
2726 2785 3.994392 TCTGAAATGGTACGCAGTCTTTC 59.006 43.478 0.00 0.00 43.93 2.62
2839 2924 5.472148 GCATGATTCAAAATCAGGACACAA 58.528 37.500 16.06 0.00 32.17 3.33
2840 2925 4.379708 CGCATGATTCAAAATCAGGACACA 60.380 41.667 16.06 0.00 32.17 3.72
2875 2962 6.435430 TGCAGTGTATAAAATCATGGTCAC 57.565 37.500 0.00 0.00 0.00 3.67
2919 3006 4.111577 TCCTTTCAGAGTGGAACCCATAT 58.888 43.478 0.00 0.00 37.80 1.78
3044 3137 5.007823 CAGGCTAGCAATTCTGATTTCTGAG 59.992 44.000 18.24 0.00 0.00 3.35
3067 3160 0.469494 ATCCATACATCACGCAGGCA 59.531 50.000 0.00 0.00 0.00 4.75
3317 3415 3.243535 GCTGATGGCAAAGTTATTAGGGC 60.244 47.826 0.00 0.00 41.35 5.19
3330 3429 4.292186 AGAACTCTTAAAGCTGATGGCA 57.708 40.909 0.00 0.00 44.79 4.92
3389 3489 3.837213 ATGTTCCTGAAAATGTGAGCG 57.163 42.857 0.00 0.00 0.00 5.03
3394 3494 4.582701 TGCGAAATGTTCCTGAAAATGT 57.417 36.364 0.00 0.00 0.00 2.71
3442 3542 1.631405 CTCTTCCCATTTGCCACCAA 58.369 50.000 0.00 0.00 0.00 3.67
3473 3576 7.231519 AGGCAATAAGGATTTATTTACCTGCTC 59.768 37.037 9.12 0.00 39.50 4.26
3557 3660 4.057432 ACAAAATGAAAATTGCCTGACCG 58.943 39.130 0.00 0.00 0.00 4.79
3558 3661 5.988561 TGTACAAAATGAAAATTGCCTGACC 59.011 36.000 0.00 0.00 0.00 4.02
3626 3729 6.174049 GCCACCTCAACTAGAAGAAATTAGT 58.826 40.000 0.00 0.00 0.00 2.24
3849 3952 3.988379 TGACAACAAACAAGGCATCTC 57.012 42.857 0.00 0.00 0.00 2.75
3887 3995 6.735968 GCCAGGTAAGCTTATTAATTTCTGCC 60.736 42.308 9.88 1.98 0.00 4.85
4001 4109 0.106015 GTCCATTAGGGGCCAGCAAT 60.106 55.000 4.39 0.00 34.11 3.56
4074 4182 3.427233 GCGTTACTGAATCTACAGTCCGT 60.427 47.826 16.04 0.00 46.36 4.69
4075 4183 3.106672 GCGTTACTGAATCTACAGTCCG 58.893 50.000 4.63 9.64 46.36 4.79
4076 4184 4.373348 AGCGTTACTGAATCTACAGTCC 57.627 45.455 4.63 0.00 46.36 3.85
4090 4198 1.344942 CGTCAGTCAGCCAGCGTTAC 61.345 60.000 0.00 0.00 0.00 2.50
4092 4200 2.356313 CGTCAGTCAGCCAGCGTT 60.356 61.111 0.00 0.00 0.00 4.84
4093 4201 3.559657 GACGTCAGTCAGCCAGCGT 62.560 63.158 11.55 0.00 46.32 5.07
4109 4217 3.005684 TGGACAGTGAAATTGCCATTGAC 59.994 43.478 0.00 4.81 28.30 3.18
4141 4261 0.682852 TGTGGAACTCGAACCGGATT 59.317 50.000 9.46 0.00 38.04 3.01
4315 4435 2.892425 CTTGATGGAGTCGCGGGC 60.892 66.667 6.13 0.00 0.00 6.13
4319 4439 1.442526 CCATGGCTTGATGGAGTCGC 61.443 60.000 0.00 0.00 45.24 5.19
4336 4456 3.289062 TCGTCGTTCTCGTGCCCA 61.289 61.111 0.00 0.00 38.33 5.36
4342 4462 2.138601 GTCGCTGTCGTCGTTCTCG 61.139 63.158 0.00 0.00 36.96 4.04
4372 4492 0.612174 CCTCCTTCCACTCGTCCTCA 60.612 60.000 0.00 0.00 0.00 3.86
4481 4601 3.669536 TGAACCATATCAACAAGTCGCA 58.330 40.909 0.00 0.00 0.00 5.10
4501 4621 4.025896 CAGTAGCGAGCATTCTGAAATCTG 60.026 45.833 0.00 0.00 0.00 2.90
4573 4693 0.608640 ACCTGGAAGCAAGACTACCG 59.391 55.000 0.00 0.00 0.00 4.02
4582 4702 5.479027 GGGACTAAAATAAAACCTGGAAGCA 59.521 40.000 0.00 0.00 0.00 3.91
4596 4716 5.010708 ACCATGAAAGGTGGGACTAAAAT 57.989 39.130 0.00 0.00 41.30 1.82
4830 4955 8.450964 CGTTGATTTGGCTAAGATAGAAAAGAA 58.549 33.333 0.00 0.00 0.00 2.52
4831 4956 7.065803 CCGTTGATTTGGCTAAGATAGAAAAGA 59.934 37.037 0.00 0.00 0.00 2.52
4832 4957 7.065803 TCCGTTGATTTGGCTAAGATAGAAAAG 59.934 37.037 0.00 0.00 0.00 2.27
4833 4958 6.882140 TCCGTTGATTTGGCTAAGATAGAAAA 59.118 34.615 0.00 0.00 0.00 2.29
4834 4959 6.411376 TCCGTTGATTTGGCTAAGATAGAAA 58.589 36.000 0.00 0.00 0.00 2.52
4835 4960 5.984725 TCCGTTGATTTGGCTAAGATAGAA 58.015 37.500 0.00 0.00 0.00 2.10
4836 4961 5.607939 TCCGTTGATTTGGCTAAGATAGA 57.392 39.130 0.00 0.00 0.00 1.98
4837 4962 6.226787 AGATCCGTTGATTTGGCTAAGATAG 58.773 40.000 0.00 0.00 0.00 2.08
4838 4963 6.042093 AGAGATCCGTTGATTTGGCTAAGATA 59.958 38.462 0.00 0.00 0.00 1.98
4839 4964 5.041191 AGATCCGTTGATTTGGCTAAGAT 57.959 39.130 0.00 0.00 0.00 2.40
4840 4965 4.162320 AGAGATCCGTTGATTTGGCTAAGA 59.838 41.667 0.00 0.00 0.00 2.10
4841 4966 4.446371 AGAGATCCGTTGATTTGGCTAAG 58.554 43.478 0.00 0.00 0.00 2.18
4842 4967 4.487714 AGAGATCCGTTGATTTGGCTAA 57.512 40.909 0.00 0.00 0.00 3.09
4843 4968 4.162320 AGAAGAGATCCGTTGATTTGGCTA 59.838 41.667 0.00 0.00 0.00 3.93
4844 4969 3.054802 AGAAGAGATCCGTTGATTTGGCT 60.055 43.478 0.00 0.00 0.00 4.75
4845 4970 3.274288 AGAAGAGATCCGTTGATTTGGC 58.726 45.455 0.00 0.00 0.00 4.52
4846 4971 8.662781 TTAATAGAAGAGATCCGTTGATTTGG 57.337 34.615 0.00 0.00 0.00 3.28
4848 4973 8.778358 GCATTAATAGAAGAGATCCGTTGATTT 58.222 33.333 0.00 0.00 0.00 2.17
4849 4974 7.933577 TGCATTAATAGAAGAGATCCGTTGATT 59.066 33.333 0.00 0.00 0.00 2.57
4850 4975 7.445121 TGCATTAATAGAAGAGATCCGTTGAT 58.555 34.615 0.00 0.00 0.00 2.57
4851 4976 6.816136 TGCATTAATAGAAGAGATCCGTTGA 58.184 36.000 0.00 0.00 0.00 3.18
4852 4977 7.482654 TTGCATTAATAGAAGAGATCCGTTG 57.517 36.000 0.00 0.00 0.00 4.10
4853 4978 8.682936 AATTGCATTAATAGAAGAGATCCGTT 57.317 30.769 0.00 0.00 0.00 4.44
4854 4979 8.562892 CAAATTGCATTAATAGAAGAGATCCGT 58.437 33.333 0.00 0.00 0.00 4.69
4855 4980 7.536622 GCAAATTGCATTAATAGAAGAGATCCG 59.463 37.037 13.73 0.00 44.26 4.18
4856 4981 8.739649 GCAAATTGCATTAATAGAAGAGATCC 57.260 34.615 13.73 0.00 44.26 3.36
4903 5028 6.551601 TGTTGATTTGGCTAAGGTAGGAAAAA 59.448 34.615 0.00 0.00 0.00 1.94
4904 5029 6.071984 TGTTGATTTGGCTAAGGTAGGAAAA 58.928 36.000 0.00 0.00 0.00 2.29
4905 5030 5.636123 TGTTGATTTGGCTAAGGTAGGAAA 58.364 37.500 0.00 0.00 0.00 3.13
4906 5031 5.013704 TCTGTTGATTTGGCTAAGGTAGGAA 59.986 40.000 0.00 0.00 0.00 3.36
4907 5032 4.534500 TCTGTTGATTTGGCTAAGGTAGGA 59.466 41.667 0.00 0.00 0.00 2.94
4929 5054 5.924825 GCAAATTGCATTAATGGGAGAGATC 59.075 40.000 17.02 0.00 44.26 2.75
5093 6835 9.393786 TGGCTAAGGTAGGAAAGAATCTATTAT 57.606 33.333 0.00 0.00 0.00 1.28
5094 6836 8.792830 TGGCTAAGGTAGGAAAGAATCTATTA 57.207 34.615 0.00 0.00 0.00 0.98
5095 6837 7.691993 TGGCTAAGGTAGGAAAGAATCTATT 57.308 36.000 0.00 0.00 0.00 1.73
5096 6838 7.691993 TTGGCTAAGGTAGGAAAGAATCTAT 57.308 36.000 0.00 0.00 0.00 1.98
5097 6839 7.504926 TTTGGCTAAGGTAGGAAAGAATCTA 57.495 36.000 0.00 0.00 0.00 1.98
5098 6840 6.388619 TTTGGCTAAGGTAGGAAAGAATCT 57.611 37.500 0.00 0.00 0.00 2.40
5099 6841 7.057264 AGATTTGGCTAAGGTAGGAAAGAATC 58.943 38.462 0.00 0.00 0.00 2.52
5100 6842 6.974795 AGATTTGGCTAAGGTAGGAAAGAAT 58.025 36.000 0.00 0.00 0.00 2.40
5101 6843 6.388619 AGATTTGGCTAAGGTAGGAAAGAA 57.611 37.500 0.00 0.00 0.00 2.52
5102 6844 6.406624 CGTAGATTTGGCTAAGGTAGGAAAGA 60.407 42.308 0.00 0.00 0.00 2.52
5103 6845 5.753921 CGTAGATTTGGCTAAGGTAGGAAAG 59.246 44.000 0.00 0.00 0.00 2.62
5104 6846 5.422970 TCGTAGATTTGGCTAAGGTAGGAAA 59.577 40.000 0.00 0.00 0.00 3.13
5105 6847 4.957954 TCGTAGATTTGGCTAAGGTAGGAA 59.042 41.667 0.00 0.00 0.00 3.36
5106 6848 4.539726 TCGTAGATTTGGCTAAGGTAGGA 58.460 43.478 0.00 0.00 0.00 2.94
5107 6849 4.931661 TCGTAGATTTGGCTAAGGTAGG 57.068 45.455 0.00 0.00 0.00 3.18
5108 6850 7.210873 AGATTTCGTAGATTTGGCTAAGGTAG 58.789 38.462 0.00 0.00 35.04 3.18
5109 6851 7.069578 AGAGATTTCGTAGATTTGGCTAAGGTA 59.930 37.037 0.00 0.00 35.04 3.08
5110 6852 5.990668 AGATTTCGTAGATTTGGCTAAGGT 58.009 37.500 0.00 0.00 35.04 3.50
5111 6853 6.284459 AGAGATTTCGTAGATTTGGCTAAGG 58.716 40.000 0.00 0.00 35.04 2.69
5112 6854 7.206687 AGAGAGATTTCGTAGATTTGGCTAAG 58.793 38.462 0.00 0.00 35.04 2.18
5113 6855 7.113658 AGAGAGATTTCGTAGATTTGGCTAA 57.886 36.000 0.00 0.00 35.04 3.09
5114 6856 6.321435 TGAGAGAGATTTCGTAGATTTGGCTA 59.679 38.462 0.00 0.00 35.04 3.93
5115 6857 5.127845 TGAGAGAGATTTCGTAGATTTGGCT 59.872 40.000 0.00 0.00 35.04 4.75
5116 6858 5.352284 TGAGAGAGATTTCGTAGATTTGGC 58.648 41.667 0.00 0.00 35.04 4.52
5117 6859 9.534565 TTAATGAGAGAGATTTCGTAGATTTGG 57.465 33.333 0.00 0.00 35.04 3.28
5120 6862 9.202273 GCATTAATGAGAGAGATTTCGTAGATT 57.798 33.333 19.73 0.00 35.04 2.40
5121 6863 8.363390 TGCATTAATGAGAGAGATTTCGTAGAT 58.637 33.333 19.73 0.00 35.04 1.98
5122 6864 7.716612 TGCATTAATGAGAGAGATTTCGTAGA 58.283 34.615 19.73 0.00 0.00 2.59
5123 6865 7.936950 TGCATTAATGAGAGAGATTTCGTAG 57.063 36.000 19.73 0.00 0.00 3.51
5124 6866 8.893219 ATTGCATTAATGAGAGAGATTTCGTA 57.107 30.769 19.73 0.00 0.00 3.43
5125 6867 7.798596 ATTGCATTAATGAGAGAGATTTCGT 57.201 32.000 19.73 0.00 0.00 3.85
5126 6868 8.955002 CAAATTGCATTAATGAGAGAGATTTCG 58.045 33.333 19.73 6.63 0.00 3.46
5127 6869 8.753175 GCAAATTGCATTAATGAGAGAGATTTC 58.247 33.333 19.73 0.00 44.26 2.17
5128 6870 8.644318 GCAAATTGCATTAATGAGAGAGATTT 57.356 30.769 19.73 10.97 44.26 2.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.