Multiple sequence alignment - TraesCS2A01G530000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G530000 chr2A 100.000 3157 0 0 1 3157 748087544 748090700 0.000000e+00 5830.0
1 TraesCS2A01G530000 chr2A 90.348 1150 77 22 973 2111 748078133 748079259 0.000000e+00 1478.0
2 TraesCS2A01G530000 chr2A 95.681 903 37 2 2255 3157 771313658 771312758 0.000000e+00 1450.0
3 TraesCS2A01G530000 chr2A 95.344 902 42 0 2256 3157 758344610 758343709 0.000000e+00 1434.0
4 TraesCS2A01G530000 chr2A 88.719 913 96 6 1059 1966 755335701 755336611 0.000000e+00 1109.0
5 TraesCS2A01G530000 chr2A 88.248 919 103 3 1059 1973 755177510 755176593 0.000000e+00 1094.0
6 TraesCS2A01G530000 chr2A 86.747 913 118 3 1056 1966 755251675 755250764 0.000000e+00 1013.0
7 TraesCS2A01G530000 chr2A 91.701 241 11 4 2023 2254 748165252 748165492 3.040000e-85 326.0
8 TraesCS2A01G530000 chr2A 91.322 242 11 5 2023 2255 748189612 748189852 3.930000e-84 322.0
9 TraesCS2A01G530000 chr2B 92.415 1437 63 23 769 2179 753747719 753749135 0.000000e+00 2008.0
10 TraesCS2A01G530000 chr2B 94.758 1259 57 4 1005 2254 753830045 753828787 0.000000e+00 1951.0
11 TraesCS2A01G530000 chr2B 88.359 902 98 5 1070 1966 765594804 765593905 0.000000e+00 1077.0
12 TraesCS2A01G530000 chr2B 89.583 192 12 3 2071 2254 753765356 753765547 1.460000e-58 237.0
13 TraesCS2A01G530000 chr2B 94.286 105 6 0 853 957 753830159 753830055 9.060000e-36 161.0
14 TraesCS2A01G530000 chr1A 95.676 902 37 1 2256 3157 565988274 565987375 0.000000e+00 1448.0
15 TraesCS2A01G530000 chr6A 95.470 905 36 3 2254 3157 86305646 86306546 0.000000e+00 1439.0
16 TraesCS2A01G530000 chr5A 95.565 902 34 4 2256 3157 692524327 692525222 0.000000e+00 1439.0
17 TraesCS2A01G530000 chr5A 95.460 903 34 5 2256 3157 539941258 539940362 0.000000e+00 1434.0
18 TraesCS2A01G530000 chr5A 95.455 902 36 2 2256 3157 580300976 580300080 0.000000e+00 1434.0
19 TraesCS2A01G530000 chr4A 95.354 904 37 3 2255 3155 616402594 616401693 0.000000e+00 1432.0
20 TraesCS2A01G530000 chr4A 90.642 748 25 6 1 706 11598703 11599447 0.000000e+00 952.0
21 TraesCS2A01G530000 chr4A 87.805 164 20 0 2 165 11598798 11598961 3.210000e-45 193.0
22 TraesCS2A01G530000 chr7A 95.233 902 43 0 2256 3157 709605703 709606604 0.000000e+00 1428.0
23 TraesCS2A01G530000 chr2D 89.010 919 96 5 1059 1973 623958499 623957582 0.000000e+00 1133.0
24 TraesCS2A01G530000 chr2D 86.696 917 117 4 1056 1968 623895267 623896182 0.000000e+00 1013.0
25 TraesCS2A01G530000 chr4D 90.278 72 7 0 2183 2254 261560024 261560095 9.320000e-16 95.3
26 TraesCS2A01G530000 chr5D 91.667 48 4 0 2207 2254 507773047 507773000 2.030000e-07 67.6
27 TraesCS2A01G530000 chrUn 82.432 74 9 4 2183 2254 92781397 92781326 9.450000e-06 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G530000 chr2A 748087544 748090700 3156 False 5830.0 5830 100.0000 1 3157 1 chr2A.!!$F2 3156
1 TraesCS2A01G530000 chr2A 748078133 748079259 1126 False 1478.0 1478 90.3480 973 2111 1 chr2A.!!$F1 1138
2 TraesCS2A01G530000 chr2A 771312758 771313658 900 True 1450.0 1450 95.6810 2255 3157 1 chr2A.!!$R4 902
3 TraesCS2A01G530000 chr2A 758343709 758344610 901 True 1434.0 1434 95.3440 2256 3157 1 chr2A.!!$R3 901
4 TraesCS2A01G530000 chr2A 755335701 755336611 910 False 1109.0 1109 88.7190 1059 1966 1 chr2A.!!$F5 907
5 TraesCS2A01G530000 chr2A 755176593 755177510 917 True 1094.0 1094 88.2480 1059 1973 1 chr2A.!!$R1 914
6 TraesCS2A01G530000 chr2A 755250764 755251675 911 True 1013.0 1013 86.7470 1056 1966 1 chr2A.!!$R2 910
7 TraesCS2A01G530000 chr2B 753747719 753749135 1416 False 2008.0 2008 92.4150 769 2179 1 chr2B.!!$F1 1410
8 TraesCS2A01G530000 chr2B 765593905 765594804 899 True 1077.0 1077 88.3590 1070 1966 1 chr2B.!!$R1 896
9 TraesCS2A01G530000 chr2B 753828787 753830159 1372 True 1056.0 1951 94.5220 853 2254 2 chr2B.!!$R2 1401
10 TraesCS2A01G530000 chr1A 565987375 565988274 899 True 1448.0 1448 95.6760 2256 3157 1 chr1A.!!$R1 901
11 TraesCS2A01G530000 chr6A 86305646 86306546 900 False 1439.0 1439 95.4700 2254 3157 1 chr6A.!!$F1 903
12 TraesCS2A01G530000 chr5A 692524327 692525222 895 False 1439.0 1439 95.5650 2256 3157 1 chr5A.!!$F1 901
13 TraesCS2A01G530000 chr5A 539940362 539941258 896 True 1434.0 1434 95.4600 2256 3157 1 chr5A.!!$R1 901
14 TraesCS2A01G530000 chr5A 580300080 580300976 896 True 1434.0 1434 95.4550 2256 3157 1 chr5A.!!$R2 901
15 TraesCS2A01G530000 chr4A 616401693 616402594 901 True 1432.0 1432 95.3540 2255 3155 1 chr4A.!!$R1 900
16 TraesCS2A01G530000 chr4A 11598703 11599447 744 False 572.5 952 89.2235 1 706 2 chr4A.!!$F1 705
17 TraesCS2A01G530000 chr7A 709605703 709606604 901 False 1428.0 1428 95.2330 2256 3157 1 chr7A.!!$F1 901
18 TraesCS2A01G530000 chr2D 623957582 623958499 917 True 1133.0 1133 89.0100 1059 1973 1 chr2D.!!$R1 914
19 TraesCS2A01G530000 chr2D 623895267 623896182 915 False 1013.0 1013 86.6960 1056 1968 1 chr2D.!!$F1 912

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
505 543 0.034477 CCCTGCCCCTCGTTTATGTT 60.034 55.0 0.0 0.0 0.00 2.71 F
596 634 0.037590 ATAAGGCCCAAGCGTGACAA 59.962 50.0 0.0 0.0 41.24 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2038 2103 1.377202 GTGCTTTGATCCCGGCAGA 60.377 57.895 0.0 0.0 35.29 4.26 R
2575 2661 3.024547 AGCAGTAGCACGGAGATAAGAA 58.975 45.455 0.0 0.0 45.49 2.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
41 42 9.706691 TTTCTATTCTCGTTCACTGTAATTTCT 57.293 29.630 0.00 0.00 0.00 2.52
147 148 9.567776 TTCACTGTAATTTCTATTCTGGTTCAA 57.432 29.630 0.00 0.00 0.00 2.69
150 151 8.462016 ACTGTAATTTCTATTCTGGTTCAATGC 58.538 33.333 0.00 0.00 0.00 3.56
155 156 8.937634 ATTTCTATTCTGGTTCAATGCAATTC 57.062 30.769 0.00 0.00 31.22 2.17
285 323 7.364522 TGTTACAGTGTGATTTCTATTCTGC 57.635 36.000 5.88 0.00 0.00 4.26
286 324 7.161404 TGTTACAGTGTGATTTCTATTCTGCT 58.839 34.615 5.88 0.00 0.00 4.24
287 325 7.118245 TGTTACAGTGTGATTTCTATTCTGCTG 59.882 37.037 5.88 0.00 0.00 4.41
288 326 5.555017 ACAGTGTGATTTCTATTCTGCTGT 58.445 37.500 0.00 0.00 0.00 4.40
289 327 6.000219 ACAGTGTGATTTCTATTCTGCTGTT 59.000 36.000 0.00 0.00 30.50 3.16
290 328 6.148480 ACAGTGTGATTTCTATTCTGCTGTTC 59.852 38.462 0.00 0.00 30.50 3.18
291 329 6.370994 CAGTGTGATTTCTATTCTGCTGTTCT 59.629 38.462 0.00 0.00 0.00 3.01
292 330 6.939163 AGTGTGATTTCTATTCTGCTGTTCTT 59.061 34.615 0.00 0.00 0.00 2.52
293 331 7.020010 GTGTGATTTCTATTCTGCTGTTCTTG 58.980 38.462 0.00 0.00 0.00 3.02
294 332 6.026513 GTGATTTCTATTCTGCTGTTCTTGC 58.973 40.000 0.00 0.00 0.00 4.01
295 333 5.706833 TGATTTCTATTCTGCTGTTCTTGCA 59.293 36.000 0.00 0.00 38.81 4.08
302 340 2.556144 TGCTGTTCTTGCAGTGAGAT 57.444 45.000 0.00 0.00 38.65 2.75
303 341 2.420642 TGCTGTTCTTGCAGTGAGATC 58.579 47.619 0.00 0.00 38.65 2.75
304 342 2.038164 TGCTGTTCTTGCAGTGAGATCT 59.962 45.455 0.00 0.00 38.65 2.75
305 343 2.672381 GCTGTTCTTGCAGTGAGATCTC 59.328 50.000 16.21 16.21 38.65 2.75
306 344 3.617045 GCTGTTCTTGCAGTGAGATCTCT 60.617 47.826 22.95 1.16 38.65 3.10
307 345 4.567971 CTGTTCTTGCAGTGAGATCTCTT 58.432 43.478 22.95 9.16 0.00 2.85
308 346 4.965814 TGTTCTTGCAGTGAGATCTCTTT 58.034 39.130 22.95 8.81 0.00 2.52
309 347 5.371526 TGTTCTTGCAGTGAGATCTCTTTT 58.628 37.500 22.95 6.36 0.00 2.27
310 348 5.237996 TGTTCTTGCAGTGAGATCTCTTTTG 59.762 40.000 22.95 17.63 0.00 2.44
311 349 5.219343 TCTTGCAGTGAGATCTCTTTTGA 57.781 39.130 22.95 9.51 0.00 2.69
312 350 4.993584 TCTTGCAGTGAGATCTCTTTTGAC 59.006 41.667 22.95 12.46 0.00 3.18
313 351 3.668447 TGCAGTGAGATCTCTTTTGACC 58.332 45.455 22.95 7.90 0.00 4.02
314 352 3.326006 TGCAGTGAGATCTCTTTTGACCT 59.674 43.478 22.95 5.39 0.00 3.85
315 353 4.202398 TGCAGTGAGATCTCTTTTGACCTT 60.202 41.667 22.95 0.00 0.00 3.50
316 354 4.153835 GCAGTGAGATCTCTTTTGACCTTG 59.846 45.833 22.95 9.05 0.00 3.61
317 355 5.303971 CAGTGAGATCTCTTTTGACCTTGT 58.696 41.667 22.95 0.00 0.00 3.16
318 356 5.178996 CAGTGAGATCTCTTTTGACCTTGTG 59.821 44.000 22.95 4.00 0.00 3.33
319 357 5.059833 GTGAGATCTCTTTTGACCTTGTGT 58.940 41.667 22.95 0.00 0.00 3.72
320 358 5.529060 GTGAGATCTCTTTTGACCTTGTGTT 59.471 40.000 22.95 0.00 0.00 3.32
321 359 6.038714 GTGAGATCTCTTTTGACCTTGTGTTT 59.961 38.462 22.95 0.00 0.00 2.83
322 360 6.603201 TGAGATCTCTTTTGACCTTGTGTTTT 59.397 34.615 22.95 0.00 0.00 2.43
323 361 7.122650 TGAGATCTCTTTTGACCTTGTGTTTTT 59.877 33.333 22.95 0.00 0.00 1.94
345 383 3.990318 AGAGCTGTTTTTACCTTGTGC 57.010 42.857 0.00 0.00 0.00 4.57
346 384 3.555966 AGAGCTGTTTTTACCTTGTGCT 58.444 40.909 0.00 0.00 0.00 4.40
347 385 3.954258 AGAGCTGTTTTTACCTTGTGCTT 59.046 39.130 0.00 0.00 0.00 3.91
348 386 4.402474 AGAGCTGTTTTTACCTTGTGCTTT 59.598 37.500 0.00 0.00 0.00 3.51
349 387 5.084818 AGCTGTTTTTACCTTGTGCTTTT 57.915 34.783 0.00 0.00 0.00 2.27
350 388 4.869861 AGCTGTTTTTACCTTGTGCTTTTG 59.130 37.500 0.00 0.00 0.00 2.44
351 389 4.629634 GCTGTTTTTACCTTGTGCTTTTGT 59.370 37.500 0.00 0.00 0.00 2.83
352 390 5.445806 GCTGTTTTTACCTTGTGCTTTTGTG 60.446 40.000 0.00 0.00 0.00 3.33
353 391 5.784177 TGTTTTTACCTTGTGCTTTTGTGA 58.216 33.333 0.00 0.00 0.00 3.58
354 392 5.866633 TGTTTTTACCTTGTGCTTTTGTGAG 59.133 36.000 0.00 0.00 0.00 3.51
355 393 5.906113 TTTTACCTTGTGCTTTTGTGAGA 57.094 34.783 0.00 0.00 0.00 3.27
356 394 5.906113 TTTACCTTGTGCTTTTGTGAGAA 57.094 34.783 0.00 0.00 0.00 2.87
357 395 5.499139 TTACCTTGTGCTTTTGTGAGAAG 57.501 39.130 0.00 0.00 0.00 2.85
358 396 3.356290 ACCTTGTGCTTTTGTGAGAAGT 58.644 40.909 0.00 0.00 0.00 3.01
359 397 4.523083 ACCTTGTGCTTTTGTGAGAAGTA 58.477 39.130 0.00 0.00 0.00 2.24
360 398 4.335594 ACCTTGTGCTTTTGTGAGAAGTAC 59.664 41.667 0.00 0.00 39.31 2.73
361 399 4.518217 CTTGTGCTTTTGTGAGAAGTACG 58.482 43.478 0.00 0.00 40.98 3.67
362 400 3.527533 TGTGCTTTTGTGAGAAGTACGT 58.472 40.909 0.00 0.00 40.98 3.57
363 401 4.684877 TGTGCTTTTGTGAGAAGTACGTA 58.315 39.130 0.00 0.00 40.98 3.57
364 402 5.110598 TGTGCTTTTGTGAGAAGTACGTAA 58.889 37.500 0.00 0.00 40.98 3.18
365 403 5.581479 TGTGCTTTTGTGAGAAGTACGTAAA 59.419 36.000 0.00 0.00 40.98 2.01
366 404 6.259167 TGTGCTTTTGTGAGAAGTACGTAAAT 59.741 34.615 0.00 0.00 40.98 1.40
367 405 6.573725 GTGCTTTTGTGAGAAGTACGTAAATG 59.426 38.462 0.00 0.00 31.77 2.32
368 406 6.259167 TGCTTTTGTGAGAAGTACGTAAATGT 59.741 34.615 0.00 0.00 0.00 2.71
369 407 7.438757 TGCTTTTGTGAGAAGTACGTAAATGTA 59.561 33.333 0.00 0.00 0.00 2.29
370 408 7.950496 GCTTTTGTGAGAAGTACGTAAATGTAG 59.050 37.037 0.00 0.00 0.00 2.74
371 409 9.188588 CTTTTGTGAGAAGTACGTAAATGTAGA 57.811 33.333 0.00 0.00 0.00 2.59
372 410 9.701098 TTTTGTGAGAAGTACGTAAATGTAGAT 57.299 29.630 0.00 0.00 0.00 1.98
373 411 8.683550 TTGTGAGAAGTACGTAAATGTAGATG 57.316 34.615 0.00 0.00 0.00 2.90
374 412 7.823665 TGTGAGAAGTACGTAAATGTAGATGT 58.176 34.615 0.00 0.00 0.00 3.06
375 413 7.966753 TGTGAGAAGTACGTAAATGTAGATGTC 59.033 37.037 0.00 0.00 0.00 3.06
376 414 8.182881 GTGAGAAGTACGTAAATGTAGATGTCT 58.817 37.037 0.00 0.00 0.00 3.41
377 415 8.737175 TGAGAAGTACGTAAATGTAGATGTCTT 58.263 33.333 0.00 0.00 0.00 3.01
378 416 9.570488 GAGAAGTACGTAAATGTAGATGTCTTT 57.430 33.333 0.00 0.00 0.00 2.52
379 417 9.924650 AGAAGTACGTAAATGTAGATGTCTTTT 57.075 29.630 0.00 0.00 0.00 2.27
398 436 4.308526 TTTTTGGTCTTTTTGCCCCTTT 57.691 36.364 0.00 0.00 0.00 3.11
399 437 2.998316 TTGGTCTTTTTGCCCCTTTG 57.002 45.000 0.00 0.00 0.00 2.77
400 438 2.166907 TGGTCTTTTTGCCCCTTTGA 57.833 45.000 0.00 0.00 0.00 2.69
401 439 1.760029 TGGTCTTTTTGCCCCTTTGAC 59.240 47.619 0.00 0.00 0.00 3.18
402 440 2.039418 GGTCTTTTTGCCCCTTTGACT 58.961 47.619 0.00 0.00 0.00 3.41
403 441 2.035961 GGTCTTTTTGCCCCTTTGACTC 59.964 50.000 0.00 0.00 0.00 3.36
404 442 2.959030 GTCTTTTTGCCCCTTTGACTCT 59.041 45.455 0.00 0.00 0.00 3.24
405 443 2.958355 TCTTTTTGCCCCTTTGACTCTG 59.042 45.455 0.00 0.00 0.00 3.35
406 444 1.703411 TTTTGCCCCTTTGACTCTGG 58.297 50.000 0.00 0.00 0.00 3.86
407 445 0.850100 TTTGCCCCTTTGACTCTGGA 59.150 50.000 0.00 0.00 0.00 3.86
408 446 0.850100 TTGCCCCTTTGACTCTGGAA 59.150 50.000 0.00 0.00 0.00 3.53
409 447 0.850100 TGCCCCTTTGACTCTGGAAA 59.150 50.000 0.00 0.00 0.00 3.13
410 448 1.428912 TGCCCCTTTGACTCTGGAAAT 59.571 47.619 0.00 0.00 0.00 2.17
411 449 2.158325 TGCCCCTTTGACTCTGGAAATT 60.158 45.455 0.00 0.00 0.00 1.82
412 450 3.075283 TGCCCCTTTGACTCTGGAAATTA 59.925 43.478 0.00 0.00 0.00 1.40
413 451 4.264352 TGCCCCTTTGACTCTGGAAATTAT 60.264 41.667 0.00 0.00 0.00 1.28
414 452 4.098501 GCCCCTTTGACTCTGGAAATTATG 59.901 45.833 0.00 0.00 0.00 1.90
415 453 5.509498 CCCCTTTGACTCTGGAAATTATGA 58.491 41.667 0.00 0.00 0.00 2.15
416 454 5.951747 CCCCTTTGACTCTGGAAATTATGAA 59.048 40.000 0.00 0.00 0.00 2.57
417 455 6.127619 CCCCTTTGACTCTGGAAATTATGAAC 60.128 42.308 0.00 0.00 0.00 3.18
418 456 6.434028 CCCTTTGACTCTGGAAATTATGAACA 59.566 38.462 0.00 0.00 0.00 3.18
419 457 7.362401 CCCTTTGACTCTGGAAATTATGAACAG 60.362 40.741 0.00 0.00 0.00 3.16
420 458 7.362401 CCTTTGACTCTGGAAATTATGAACAGG 60.362 40.741 0.00 0.00 0.00 4.00
421 459 4.943705 TGACTCTGGAAATTATGAACAGGC 59.056 41.667 0.00 0.00 0.00 4.85
422 460 5.184892 ACTCTGGAAATTATGAACAGGCT 57.815 39.130 0.00 0.00 0.00 4.58
423 461 5.574188 ACTCTGGAAATTATGAACAGGCTT 58.426 37.500 0.00 0.00 0.00 4.35
424 462 5.416952 ACTCTGGAAATTATGAACAGGCTTG 59.583 40.000 0.00 0.00 0.00 4.01
425 463 4.158394 TCTGGAAATTATGAACAGGCTTGC 59.842 41.667 0.00 0.00 0.00 4.01
426 464 3.831333 TGGAAATTATGAACAGGCTTGCA 59.169 39.130 0.00 0.00 0.00 4.08
427 465 4.082081 TGGAAATTATGAACAGGCTTGCAG 60.082 41.667 0.00 0.00 0.00 4.41
428 466 4.427312 GAAATTATGAACAGGCTTGCAGG 58.573 43.478 0.00 0.00 0.00 4.85
429 467 1.176527 TTATGAACAGGCTTGCAGGC 58.823 50.000 13.24 13.24 41.73 4.85
452 490 1.511613 TTTTTGGCCCCATTGGTTCA 58.488 45.000 0.00 0.00 36.04 3.18
453 491 1.511613 TTTTGGCCCCATTGGTTCAA 58.488 45.000 0.00 0.70 36.04 2.69
454 492 1.055040 TTTGGCCCCATTGGTTCAAG 58.945 50.000 0.00 0.00 36.04 3.02
455 493 0.105246 TTGGCCCCATTGGTTCAAGT 60.105 50.000 0.00 0.00 36.04 3.16
456 494 0.831288 TGGCCCCATTGGTTCAAGTG 60.831 55.000 0.00 0.00 36.04 3.16
457 495 0.831711 GGCCCCATTGGTTCAAGTGT 60.832 55.000 1.20 0.00 36.04 3.55
458 496 1.047801 GCCCCATTGGTTCAAGTGTT 58.952 50.000 1.20 0.00 36.04 3.32
459 497 1.416030 GCCCCATTGGTTCAAGTGTTT 59.584 47.619 1.20 0.00 36.04 2.83
460 498 2.547855 GCCCCATTGGTTCAAGTGTTTC 60.548 50.000 1.20 0.00 36.04 2.78
461 499 2.965147 CCCCATTGGTTCAAGTGTTTCT 59.035 45.455 1.20 0.00 0.00 2.52
462 500 3.005791 CCCCATTGGTTCAAGTGTTTCTC 59.994 47.826 1.20 0.00 0.00 2.87
463 501 3.636300 CCCATTGGTTCAAGTGTTTCTCA 59.364 43.478 1.20 0.00 0.00 3.27
464 502 4.261741 CCCATTGGTTCAAGTGTTTCTCAG 60.262 45.833 1.20 0.00 0.00 3.35
465 503 4.580167 CCATTGGTTCAAGTGTTTCTCAGA 59.420 41.667 0.00 0.00 0.00 3.27
466 504 5.242393 CCATTGGTTCAAGTGTTTCTCAGAT 59.758 40.000 0.00 0.00 0.00 2.90
467 505 5.756195 TTGGTTCAAGTGTTTCTCAGATG 57.244 39.130 0.00 0.00 0.00 2.90
468 506 4.780815 TGGTTCAAGTGTTTCTCAGATGT 58.219 39.130 0.00 0.00 0.00 3.06
469 507 5.192927 TGGTTCAAGTGTTTCTCAGATGTT 58.807 37.500 0.00 0.00 0.00 2.71
470 508 5.066375 TGGTTCAAGTGTTTCTCAGATGTTG 59.934 40.000 0.00 0.00 0.00 3.33
471 509 5.296780 GGTTCAAGTGTTTCTCAGATGTTGA 59.703 40.000 0.00 0.00 0.00 3.18
481 519 2.871022 CTCAGATGTTGAGCATGTAGGC 59.129 50.000 0.00 0.00 46.30 3.93
482 520 3.431905 CTCAGATGTTGAGCATGTAGGCT 60.432 47.826 0.00 0.00 46.30 4.58
483 521 3.054875 TCAGATGTTGAGCATGTAGGCTT 60.055 43.478 0.00 0.00 45.99 4.35
484 522 3.311871 CAGATGTTGAGCATGTAGGCTTC 59.688 47.826 0.00 0.00 45.99 3.86
485 523 2.113860 TGTTGAGCATGTAGGCTTCC 57.886 50.000 0.00 0.00 45.99 3.46
486 524 1.340017 TGTTGAGCATGTAGGCTTCCC 60.340 52.381 0.00 0.00 45.99 3.97
487 525 0.255890 TTGAGCATGTAGGCTTCCCC 59.744 55.000 0.00 0.00 45.99 4.81
488 526 1.149401 GAGCATGTAGGCTTCCCCC 59.851 63.158 0.00 0.00 45.99 5.40
489 527 1.308216 AGCATGTAGGCTTCCCCCT 60.308 57.895 0.00 0.00 42.71 4.79
490 528 1.152881 GCATGTAGGCTTCCCCCTG 60.153 63.158 0.00 0.00 36.41 4.45
491 529 1.152881 CATGTAGGCTTCCCCCTGC 60.153 63.158 0.00 0.00 38.01 4.85
499 537 4.995058 TTCCCCCTGCCCCTCGTT 62.995 66.667 0.00 0.00 0.00 3.85
500 538 4.995058 TCCCCCTGCCCCTCGTTT 62.995 66.667 0.00 0.00 0.00 3.60
501 539 3.012722 CCCCCTGCCCCTCGTTTA 61.013 66.667 0.00 0.00 0.00 2.01
502 540 2.383601 CCCCCTGCCCCTCGTTTAT 61.384 63.158 0.00 0.00 0.00 1.40
503 541 1.152963 CCCCTGCCCCTCGTTTATG 60.153 63.158 0.00 0.00 0.00 1.90
504 542 1.607612 CCCTGCCCCTCGTTTATGT 59.392 57.895 0.00 0.00 0.00 2.29
505 543 0.034477 CCCTGCCCCTCGTTTATGTT 60.034 55.000 0.00 0.00 0.00 2.71
506 544 1.615919 CCCTGCCCCTCGTTTATGTTT 60.616 52.381 0.00 0.00 0.00 2.83
507 545 2.167662 CCTGCCCCTCGTTTATGTTTT 58.832 47.619 0.00 0.00 0.00 2.43
508 546 2.560981 CCTGCCCCTCGTTTATGTTTTT 59.439 45.455 0.00 0.00 0.00 1.94
531 569 7.399245 TTTTTGTTTTTGTAGCTGGTCTAGT 57.601 32.000 0.00 0.00 0.00 2.57
532 570 6.613755 TTTGTTTTTGTAGCTGGTCTAGTC 57.386 37.500 0.00 0.00 0.00 2.59
533 571 5.546621 TGTTTTTGTAGCTGGTCTAGTCT 57.453 39.130 0.00 0.00 0.00 3.24
534 572 5.297547 TGTTTTTGTAGCTGGTCTAGTCTG 58.702 41.667 0.00 0.00 0.00 3.51
535 573 4.537135 TTTTGTAGCTGGTCTAGTCTGG 57.463 45.455 0.00 0.00 0.00 3.86
536 574 1.475403 TGTAGCTGGTCTAGTCTGGC 58.525 55.000 0.00 0.00 0.00 4.85
537 575 0.747852 GTAGCTGGTCTAGTCTGGCC 59.252 60.000 0.00 0.00 0.00 5.36
538 576 0.752009 TAGCTGGTCTAGTCTGGCCG 60.752 60.000 0.00 0.00 0.00 6.13
539 577 3.082579 GCTGGTCTAGTCTGGCCGG 62.083 68.421 4.71 4.71 0.00 6.13
540 578 1.682684 CTGGTCTAGTCTGGCCGGT 60.683 63.158 12.43 0.00 0.00 5.28
541 579 1.668101 CTGGTCTAGTCTGGCCGGTC 61.668 65.000 12.43 5.99 0.00 4.79
542 580 2.772691 GGTCTAGTCTGGCCGGTCG 61.773 68.421 12.43 0.00 0.00 4.79
543 581 1.748122 GTCTAGTCTGGCCGGTCGA 60.748 63.158 12.43 0.81 0.00 4.20
544 582 1.001764 TCTAGTCTGGCCGGTCGAA 60.002 57.895 12.43 0.00 0.00 3.71
545 583 0.395311 TCTAGTCTGGCCGGTCGAAT 60.395 55.000 12.43 3.66 0.00 3.34
546 584 0.460311 CTAGTCTGGCCGGTCGAATT 59.540 55.000 12.43 0.00 0.00 2.17
547 585 0.899720 TAGTCTGGCCGGTCGAATTT 59.100 50.000 12.43 0.00 0.00 1.82
548 586 0.673644 AGTCTGGCCGGTCGAATTTG 60.674 55.000 12.43 0.00 0.00 2.32
549 587 0.953960 GTCTGGCCGGTCGAATTTGT 60.954 55.000 12.43 0.00 0.00 2.83
550 588 0.250553 TCTGGCCGGTCGAATTTGTT 60.251 50.000 12.43 0.00 0.00 2.83
551 589 0.596082 CTGGCCGGTCGAATTTGTTT 59.404 50.000 2.29 0.00 0.00 2.83
552 590 0.312416 TGGCCGGTCGAATTTGTTTG 59.688 50.000 0.00 0.00 0.00 2.93
553 591 0.388006 GGCCGGTCGAATTTGTTTGG 60.388 55.000 1.90 0.00 0.00 3.28
554 592 1.006825 GCCGGTCGAATTTGTTTGGC 61.007 55.000 1.90 8.40 0.00 4.52
555 593 0.388006 CCGGTCGAATTTGTTTGGCC 60.388 55.000 0.00 0.00 0.00 5.36
556 594 0.312416 CGGTCGAATTTGTTTGGCCA 59.688 50.000 0.00 0.00 0.00 5.36
557 595 1.778334 GGTCGAATTTGTTTGGCCAC 58.222 50.000 3.88 0.00 0.00 5.01
558 596 1.604438 GGTCGAATTTGTTTGGCCACC 60.604 52.381 3.88 0.00 0.00 4.61
559 597 0.676736 TCGAATTTGTTTGGCCACCC 59.323 50.000 3.88 0.00 0.00 4.61
560 598 0.665972 CGAATTTGTTTGGCCACCCG 60.666 55.000 3.88 0.00 0.00 5.28
561 599 0.320334 GAATTTGTTTGGCCACCCGG 60.320 55.000 3.88 0.00 0.00 5.73
562 600 1.051556 AATTTGTTTGGCCACCCGGT 61.052 50.000 3.88 0.00 33.28 5.28
563 601 1.753368 ATTTGTTTGGCCACCCGGTG 61.753 55.000 3.88 10.95 33.28 4.94
564 602 2.856039 TTTGTTTGGCCACCCGGTGA 62.856 55.000 19.81 0.00 35.23 4.02
565 603 2.519780 GTTTGGCCACCCGGTGAA 60.520 61.111 19.81 2.45 35.23 3.18
566 604 2.519780 TTTGGCCACCCGGTGAAC 60.520 61.111 19.81 11.36 35.23 3.18
567 605 4.939368 TTGGCCACCCGGTGAACG 62.939 66.667 19.81 3.48 43.80 3.95
572 610 4.289245 CACCCGGTGAACGTCCGT 62.289 66.667 12.68 0.00 45.63 4.69
573 611 2.597217 ACCCGGTGAACGTCCGTA 60.597 61.111 12.53 0.00 45.63 4.02
574 612 2.126346 CCCGGTGAACGTCCGTAC 60.126 66.667 12.53 0.00 45.63 3.67
585 623 3.860681 TCCGTACGGATAAGGCCC 58.139 61.111 32.61 0.00 39.76 5.80
586 624 1.076118 TCCGTACGGATAAGGCCCA 60.076 57.895 32.61 7.74 39.76 5.36
587 625 0.687098 TCCGTACGGATAAGGCCCAA 60.687 55.000 32.61 6.92 39.76 4.12
588 626 0.249741 CCGTACGGATAAGGCCCAAG 60.250 60.000 30.64 0.00 37.50 3.61
589 627 0.878961 CGTACGGATAAGGCCCAAGC 60.879 60.000 7.57 0.00 38.76 4.01
590 628 0.878961 GTACGGATAAGGCCCAAGCG 60.879 60.000 0.00 0.00 41.24 4.68
591 629 1.332144 TACGGATAAGGCCCAAGCGT 61.332 55.000 0.00 0.00 41.24 5.07
592 630 2.180204 CGGATAAGGCCCAAGCGTG 61.180 63.158 0.00 0.00 41.24 5.34
593 631 1.223487 GGATAAGGCCCAAGCGTGA 59.777 57.895 0.00 0.00 41.24 4.35
594 632 1.095807 GGATAAGGCCCAAGCGTGAC 61.096 60.000 0.00 0.00 41.24 3.67
595 633 0.392461 GATAAGGCCCAAGCGTGACA 60.392 55.000 0.00 0.00 41.24 3.58
596 634 0.037590 ATAAGGCCCAAGCGTGACAA 59.962 50.000 0.00 0.00 41.24 3.18
597 635 0.037590 TAAGGCCCAAGCGTGACAAT 59.962 50.000 0.00 0.00 41.24 2.71
598 636 1.526575 AAGGCCCAAGCGTGACAATG 61.527 55.000 0.00 0.00 41.24 2.82
599 637 2.568090 GCCCAAGCGTGACAATGG 59.432 61.111 0.00 0.00 0.00 3.16
600 638 1.971167 GCCCAAGCGTGACAATGGA 60.971 57.895 0.00 0.00 34.82 3.41
601 639 1.315257 GCCCAAGCGTGACAATGGAT 61.315 55.000 0.00 0.00 34.82 3.41
602 640 0.734889 CCCAAGCGTGACAATGGATC 59.265 55.000 0.00 0.00 34.82 3.36
603 641 1.452110 CCAAGCGTGACAATGGATCA 58.548 50.000 0.00 0.00 34.82 2.92
604 642 2.019249 CCAAGCGTGACAATGGATCAT 58.981 47.619 0.00 0.00 34.82 2.45
605 643 2.223409 CCAAGCGTGACAATGGATCATG 60.223 50.000 0.00 0.00 34.82 3.07
606 644 2.679336 CAAGCGTGACAATGGATCATGA 59.321 45.455 0.00 0.00 35.46 3.07
607 645 2.989909 AGCGTGACAATGGATCATGAA 58.010 42.857 0.00 0.00 35.46 2.57
608 646 2.941064 AGCGTGACAATGGATCATGAAG 59.059 45.455 0.00 0.00 35.46 3.02
609 647 2.938451 GCGTGACAATGGATCATGAAGA 59.062 45.455 0.00 0.00 35.46 2.87
610 648 3.374988 GCGTGACAATGGATCATGAAGAA 59.625 43.478 0.00 0.00 35.46 2.52
611 649 4.142622 GCGTGACAATGGATCATGAAGAAA 60.143 41.667 0.00 0.00 35.46 2.52
612 650 5.619757 GCGTGACAATGGATCATGAAGAAAA 60.620 40.000 0.00 0.00 35.46 2.29
613 651 6.025896 CGTGACAATGGATCATGAAGAAAAG 58.974 40.000 0.00 0.00 35.46 2.27
614 652 6.128200 CGTGACAATGGATCATGAAGAAAAGA 60.128 38.462 0.00 0.00 35.46 2.52
615 653 7.025963 GTGACAATGGATCATGAAGAAAAGAC 58.974 38.462 0.00 0.00 0.00 3.01
616 654 6.716173 TGACAATGGATCATGAAGAAAAGACA 59.284 34.615 0.00 0.00 0.00 3.41
617 655 6.917533 ACAATGGATCATGAAGAAAAGACAC 58.082 36.000 0.00 0.00 0.00 3.67
618 656 6.491062 ACAATGGATCATGAAGAAAAGACACA 59.509 34.615 0.00 0.00 0.00 3.72
619 657 5.947228 TGGATCATGAAGAAAAGACACAC 57.053 39.130 0.00 0.00 0.00 3.82
620 658 5.375773 TGGATCATGAAGAAAAGACACACA 58.624 37.500 0.00 0.00 0.00 3.72
621 659 5.471116 TGGATCATGAAGAAAAGACACACAG 59.529 40.000 0.00 0.00 0.00 3.66
622 660 4.818534 TCATGAAGAAAAGACACACAGC 57.181 40.909 0.00 0.00 0.00 4.40
623 661 3.248363 TCATGAAGAAAAGACACACAGCG 59.752 43.478 0.00 0.00 0.00 5.18
624 662 1.330521 TGAAGAAAAGACACACAGCGC 59.669 47.619 0.00 0.00 0.00 5.92
625 663 0.304705 AAGAAAAGACACACAGCGCG 59.695 50.000 0.00 0.00 0.00 6.86
626 664 1.082756 GAAAAGACACACAGCGCGG 60.083 57.895 8.83 5.83 0.00 6.46
627 665 3.181169 AAAAGACACACAGCGCGGC 62.181 57.895 8.83 0.00 0.00 6.53
628 666 4.908687 AAGACACACAGCGCGGCA 62.909 61.111 8.83 0.00 0.00 5.69
635 673 4.082523 ACAGCGCGGCAGGTACAT 62.083 61.111 8.83 0.00 0.00 2.29
636 674 3.566853 CAGCGCGGCAGGTACATG 61.567 66.667 8.83 2.43 0.00 3.21
637 675 4.838152 AGCGCGGCAGGTACATGG 62.838 66.667 8.83 0.00 0.00 3.66
638 676 4.830765 GCGCGGCAGGTACATGGA 62.831 66.667 8.83 0.00 0.00 3.41
639 677 2.890474 CGCGGCAGGTACATGGAC 60.890 66.667 9.91 0.00 0.00 4.02
640 678 2.267642 GCGGCAGGTACATGGACA 59.732 61.111 10.99 0.00 0.00 4.02
641 679 1.153168 GCGGCAGGTACATGGACAT 60.153 57.895 10.99 0.00 0.00 3.06
642 680 0.105964 GCGGCAGGTACATGGACATA 59.894 55.000 10.99 0.00 0.00 2.29
643 681 1.865865 CGGCAGGTACATGGACATAC 58.134 55.000 10.99 0.00 0.00 2.39
644 682 1.138069 CGGCAGGTACATGGACATACA 59.862 52.381 10.99 0.00 0.00 2.29
645 683 2.419436 CGGCAGGTACATGGACATACAA 60.419 50.000 10.99 0.00 0.00 2.41
646 684 3.616219 GGCAGGTACATGGACATACAAA 58.384 45.455 10.99 0.00 0.00 2.83
647 685 4.013728 GGCAGGTACATGGACATACAAAA 58.986 43.478 10.99 0.00 0.00 2.44
648 686 4.461081 GGCAGGTACATGGACATACAAAAA 59.539 41.667 10.99 0.00 0.00 1.94
649 687 5.127031 GGCAGGTACATGGACATACAAAAAT 59.873 40.000 10.99 0.00 0.00 1.82
650 688 6.350949 GGCAGGTACATGGACATACAAAAATT 60.351 38.462 10.99 0.00 0.00 1.82
651 689 6.751888 GCAGGTACATGGACATACAAAAATTC 59.248 38.462 10.99 0.00 0.00 2.17
652 690 6.966632 CAGGTACATGGACATACAAAAATTCG 59.033 38.462 10.99 0.00 0.00 3.34
653 691 6.882140 AGGTACATGGACATACAAAAATTCGA 59.118 34.615 10.99 0.00 0.00 3.71
654 692 6.964934 GGTACATGGACATACAAAAATTCGAC 59.035 38.462 10.99 0.00 0.00 4.20
655 693 6.817765 ACATGGACATACAAAAATTCGACT 57.182 33.333 0.00 0.00 0.00 4.18
656 694 6.611381 ACATGGACATACAAAAATTCGACTG 58.389 36.000 0.00 0.00 0.00 3.51
657 695 6.429692 ACATGGACATACAAAAATTCGACTGA 59.570 34.615 0.00 0.00 0.00 3.41
658 696 6.869315 TGGACATACAAAAATTCGACTGAA 57.131 33.333 0.00 0.00 38.76 3.02
659 697 6.898041 TGGACATACAAAAATTCGACTGAAG 58.102 36.000 0.00 0.00 37.57 3.02
660 698 5.795441 GGACATACAAAAATTCGACTGAAGC 59.205 40.000 0.00 0.00 37.57 3.86
661 699 6.348540 GGACATACAAAAATTCGACTGAAGCT 60.349 38.462 0.00 0.00 37.57 3.74
662 700 6.970484 ACATACAAAAATTCGACTGAAGCTT 58.030 32.000 0.00 0.00 37.57 3.74
663 701 8.094798 ACATACAAAAATTCGACTGAAGCTTA 57.905 30.769 0.00 0.00 37.57 3.09
664 702 8.564574 ACATACAAAAATTCGACTGAAGCTTAA 58.435 29.630 0.00 0.00 37.57 1.85
665 703 9.559958 CATACAAAAATTCGACTGAAGCTTAAT 57.440 29.630 0.00 0.00 37.57 1.40
668 706 9.959749 ACAAAAATTCGACTGAAGCTTAATTAA 57.040 25.926 0.00 0.00 37.57 1.40
675 713 9.825972 TTCGACTGAAGCTTAATTAAATTTCAG 57.174 29.630 28.59 28.59 44.23 3.02
676 714 9.214957 TCGACTGAAGCTTAATTAAATTTCAGA 57.785 29.630 32.50 20.50 42.38 3.27
677 715 9.267096 CGACTGAAGCTTAATTAAATTTCAGAC 57.733 33.333 32.50 28.33 42.38 3.51
678 716 9.267096 GACTGAAGCTTAATTAAATTTCAGACG 57.733 33.333 32.50 20.43 42.38 4.18
679 717 8.237267 ACTGAAGCTTAATTAAATTTCAGACGG 58.763 33.333 32.50 20.22 42.38 4.79
680 718 8.330466 TGAAGCTTAATTAAATTTCAGACGGA 57.670 30.769 15.06 0.00 0.00 4.69
681 719 8.956426 TGAAGCTTAATTAAATTTCAGACGGAT 58.044 29.630 15.06 0.00 0.00 4.18
682 720 9.226345 GAAGCTTAATTAAATTTCAGACGGATG 57.774 33.333 0.00 0.00 0.00 3.51
683 721 7.196331 AGCTTAATTAAATTTCAGACGGATGC 58.804 34.615 0.00 0.00 0.00 3.91
684 722 7.067494 AGCTTAATTAAATTTCAGACGGATGCT 59.933 33.333 0.00 0.00 0.00 3.79
685 723 8.342634 GCTTAATTAAATTTCAGACGGATGCTA 58.657 33.333 0.00 0.00 0.00 3.49
691 729 9.607988 TTAAATTTCAGACGGATGCTAAATAGA 57.392 29.630 0.00 0.00 0.00 1.98
692 730 7.484035 AATTTCAGACGGATGCTAAATAGAC 57.516 36.000 0.00 0.00 0.00 2.59
693 731 5.592104 TTCAGACGGATGCTAAATAGACA 57.408 39.130 0.00 0.00 0.00 3.41
694 732 5.188327 TCAGACGGATGCTAAATAGACAG 57.812 43.478 0.00 0.00 0.00 3.51
695 733 4.645136 TCAGACGGATGCTAAATAGACAGT 59.355 41.667 0.00 0.00 0.00 3.55
696 734 4.979197 CAGACGGATGCTAAATAGACAGTC 59.021 45.833 0.00 0.00 0.00 3.51
697 735 4.038162 AGACGGATGCTAAATAGACAGTCC 59.962 45.833 0.00 0.00 0.00 3.85
698 736 3.961408 ACGGATGCTAAATAGACAGTCCT 59.039 43.478 0.00 0.00 0.00 3.85
699 737 4.406003 ACGGATGCTAAATAGACAGTCCTT 59.594 41.667 0.00 0.00 0.00 3.36
700 738 5.597182 ACGGATGCTAAATAGACAGTCCTTA 59.403 40.000 0.00 0.00 0.00 2.69
701 739 6.097839 ACGGATGCTAAATAGACAGTCCTTAA 59.902 38.462 0.00 0.00 0.00 1.85
702 740 6.984474 CGGATGCTAAATAGACAGTCCTTAAA 59.016 38.462 0.00 0.00 0.00 1.52
703 741 7.494625 CGGATGCTAAATAGACAGTCCTTAAAA 59.505 37.037 0.00 0.00 0.00 1.52
704 742 9.174166 GGATGCTAAATAGACAGTCCTTAAAAA 57.826 33.333 0.00 0.00 0.00 1.94
727 765 7.496529 AAAAAGATTGATCGAGTTCACAAGA 57.503 32.000 0.00 0.00 0.00 3.02
728 766 6.473397 AAAGATTGATCGAGTTCACAAGAC 57.527 37.500 0.00 0.00 0.00 3.01
729 767 4.499183 AGATTGATCGAGTTCACAAGACC 58.501 43.478 0.00 0.00 0.00 3.85
730 768 3.744238 TTGATCGAGTTCACAAGACCA 57.256 42.857 0.00 0.00 0.00 4.02
731 769 3.744238 TGATCGAGTTCACAAGACCAA 57.256 42.857 0.00 0.00 0.00 3.67
732 770 4.066646 TGATCGAGTTCACAAGACCAAA 57.933 40.909 0.00 0.00 0.00 3.28
733 771 3.807622 TGATCGAGTTCACAAGACCAAAC 59.192 43.478 0.00 0.00 0.00 2.93
734 772 3.254470 TCGAGTTCACAAGACCAAACA 57.746 42.857 0.00 0.00 0.00 2.83
735 773 3.601435 TCGAGTTCACAAGACCAAACAA 58.399 40.909 0.00 0.00 0.00 2.83
736 774 4.004314 TCGAGTTCACAAGACCAAACAAA 58.996 39.130 0.00 0.00 0.00 2.83
737 775 4.638421 TCGAGTTCACAAGACCAAACAAAT 59.362 37.500 0.00 0.00 0.00 2.32
738 776 5.818336 TCGAGTTCACAAGACCAAACAAATA 59.182 36.000 0.00 0.00 0.00 1.40
739 777 5.907391 CGAGTTCACAAGACCAAACAAATAC 59.093 40.000 0.00 0.00 0.00 1.89
740 778 6.238374 CGAGTTCACAAGACCAAACAAATACT 60.238 38.462 0.00 0.00 0.00 2.12
741 779 7.042321 CGAGTTCACAAGACCAAACAAATACTA 60.042 37.037 0.00 0.00 0.00 1.82
742 780 7.927048 AGTTCACAAGACCAAACAAATACTAC 58.073 34.615 0.00 0.00 0.00 2.73
743 781 6.870971 TCACAAGACCAAACAAATACTACC 57.129 37.500 0.00 0.00 0.00 3.18
744 782 6.358178 TCACAAGACCAAACAAATACTACCA 58.642 36.000 0.00 0.00 0.00 3.25
745 783 6.261381 TCACAAGACCAAACAAATACTACCAC 59.739 38.462 0.00 0.00 0.00 4.16
746 784 5.533528 ACAAGACCAAACAAATACTACCACC 59.466 40.000 0.00 0.00 0.00 4.61
747 785 4.659115 AGACCAAACAAATACTACCACCC 58.341 43.478 0.00 0.00 0.00 4.61
748 786 4.105057 AGACCAAACAAATACTACCACCCA 59.895 41.667 0.00 0.00 0.00 4.51
749 787 4.403734 ACCAAACAAATACTACCACCCAG 58.596 43.478 0.00 0.00 0.00 4.45
750 788 4.141111 ACCAAACAAATACTACCACCCAGT 60.141 41.667 0.00 0.00 0.00 4.00
751 789 5.073417 ACCAAACAAATACTACCACCCAGTA 59.927 40.000 0.00 0.00 33.22 2.74
752 790 6.005198 CCAAACAAATACTACCACCCAGTAA 58.995 40.000 0.00 0.00 32.47 2.24
753 791 6.150474 CCAAACAAATACTACCACCCAGTAAG 59.850 42.308 0.00 0.00 32.47 2.34
754 792 5.431179 ACAAATACTACCACCCAGTAAGG 57.569 43.478 0.00 0.00 32.47 2.69
755 793 4.848086 ACAAATACTACCACCCAGTAAGGT 59.152 41.667 0.00 0.00 42.40 3.50
761 799 4.350562 ACCCAGTAAGGTGGCCTT 57.649 55.556 3.32 5.69 46.63 4.35
762 800 2.564179 ACCCAGTAAGGTGGCCTTT 58.436 52.632 3.32 0.00 41.69 3.11
763 801 0.112412 ACCCAGTAAGGTGGCCTTTG 59.888 55.000 3.32 0.00 41.69 2.77
764 802 0.404040 CCCAGTAAGGTGGCCTTTGA 59.596 55.000 3.32 0.00 41.69 2.69
765 803 1.534729 CCAGTAAGGTGGCCTTTGAC 58.465 55.000 3.32 0.00 41.69 3.18
766 804 1.534729 CAGTAAGGTGGCCTTTGACC 58.465 55.000 3.32 2.33 41.69 4.02
767 805 1.145571 AGTAAGGTGGCCTTTGACCA 58.854 50.000 12.26 0.00 41.69 4.02
811 849 2.264480 CGGGTTCGCTGTCATGGA 59.736 61.111 0.00 0.00 0.00 3.41
886 924 3.061965 TCAATATGTCACGCGTGATGTTG 59.938 43.478 40.84 34.69 42.18 3.33
950 988 1.282738 GTCTTTATTCCCGGTTCCCCA 59.717 52.381 0.00 0.00 0.00 4.96
966 1011 5.823045 GGTTCCCCAAACAGTTCTCTATATG 59.177 44.000 0.00 0.00 39.81 1.78
967 1012 5.036117 TCCCCAAACAGTTCTCTATATGC 57.964 43.478 0.00 0.00 0.00 3.14
1007 1056 1.721926 GCGAGTGACTAGCAGTTTCAC 59.278 52.381 12.87 2.92 40.04 3.18
1020 1069 3.321497 CAGTTTCACTAGAGACACCTGC 58.679 50.000 0.00 0.00 31.59 4.85
1214 1264 2.835431 CTCCACCTCCTCGGCGAT 60.835 66.667 11.27 0.00 35.61 4.58
1526 1580 2.793933 CGAAAAGGTACGGGATCTCGTC 60.794 54.545 26.67 15.84 42.82 4.20
1611 1665 0.325203 GAGCCTGAACCTCCTCTCCT 60.325 60.000 0.00 0.00 0.00 3.69
1925 1979 2.679716 GGCAAGGACCTGCTGGAT 59.320 61.111 17.64 0.21 42.25 3.41
1983 2042 3.735237 TTTCTGTCTGAGAGGACACAC 57.265 47.619 1.65 0.00 40.72 3.82
2025 2090 1.061411 CGCACATGAATGGTCAGCG 59.939 57.895 0.00 0.00 37.14 5.18
2038 2103 2.356313 CAGCGTTGCCGACTGAGT 60.356 61.111 0.00 0.00 39.18 3.41
2068 2134 1.980772 AAAGCACATGGCCAGCCTC 60.981 57.895 13.05 0.05 46.50 4.70
2205 2285 7.259290 ACCATATTACTTGTCGCTTAAATGG 57.741 36.000 0.00 0.00 36.93 3.16
2208 2288 8.017373 CCATATTACTTGTCGCTTAAATGGATG 58.983 37.037 0.00 0.00 33.54 3.51
2272 2352 5.756833 CGACAAACACTAGTAGAAAAAGGGT 59.243 40.000 3.59 0.00 0.00 4.34
2348 2428 2.961062 GGGTCGTTACTAATGCCCTAGA 59.039 50.000 10.85 0.00 33.56 2.43
2391 2471 3.411517 CCGGGACAGATGGGCCTT 61.412 66.667 4.53 0.00 0.00 4.35
2488 2568 1.291184 CCACGCGTCAGCATTTCAGA 61.291 55.000 9.86 0.00 45.49 3.27
2490 2570 0.319900 ACGCGTCAGCATTTCAGAGT 60.320 50.000 5.58 0.00 45.49 3.24
2563 2649 9.525826 TTAGGTTGGTATAGGTAGCTAATAGAC 57.474 37.037 5.62 0.00 0.00 2.59
2605 2691 2.223829 CCGTGCTACTGCTACTGCTATT 60.224 50.000 0.00 0.00 40.48 1.73
2606 2692 3.448686 CGTGCTACTGCTACTGCTATTT 58.551 45.455 0.00 0.00 40.48 1.40
2607 2693 3.865745 CGTGCTACTGCTACTGCTATTTT 59.134 43.478 0.00 0.00 40.48 1.82
2799 2885 4.320870 TCATACTCGCATCATGCATCATT 58.679 39.130 11.00 0.00 45.36 2.57
2840 2926 9.539825 GTCTACTGATCATCATCATACAACTTT 57.460 33.333 0.00 0.00 38.42 2.66
3027 3147 5.246656 GGAGAATGGAGATCATCATGTCTCT 59.753 44.000 21.59 14.09 40.50 3.10
3125 3248 6.662865 TTTGCATGTCTCCATTCCTTTTAA 57.337 33.333 0.00 0.00 0.00 1.52
3148 3271 5.505181 AAATCTGGTATGGACAGTTGAGT 57.495 39.130 0.00 0.00 37.25 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
67 68 5.710567 TGAGCTAACACTGACACTACTGTAT 59.289 40.000 0.00 0.00 0.00 2.29
120 121 9.219603 TGAACCAGAATAGAAATTACAGTGAAG 57.780 33.333 0.00 0.00 0.00 3.02
269 307 6.348786 GCAAGAACAGCAGAATAGAAATCACA 60.349 38.462 0.00 0.00 0.00 3.58
270 308 6.026513 GCAAGAACAGCAGAATAGAAATCAC 58.973 40.000 0.00 0.00 0.00 3.06
271 309 5.706833 TGCAAGAACAGCAGAATAGAAATCA 59.293 36.000 0.00 0.00 37.02 2.57
272 310 6.187125 TGCAAGAACAGCAGAATAGAAATC 57.813 37.500 0.00 0.00 37.02 2.17
283 321 2.038164 AGATCTCACTGCAAGAACAGCA 59.962 45.455 0.00 0.00 41.60 4.41
284 322 2.672381 GAGATCTCACTGCAAGAACAGC 59.328 50.000 18.11 0.00 41.60 4.40
285 323 4.191033 AGAGATCTCACTGCAAGAACAG 57.809 45.455 24.39 0.00 43.59 3.16
286 324 4.613925 AAGAGATCTCACTGCAAGAACA 57.386 40.909 24.39 0.00 37.43 3.18
287 325 5.468072 TCAAAAGAGATCTCACTGCAAGAAC 59.532 40.000 24.39 0.00 37.43 3.01
288 326 5.468072 GTCAAAAGAGATCTCACTGCAAGAA 59.532 40.000 24.39 0.26 37.43 2.52
289 327 4.993584 GTCAAAAGAGATCTCACTGCAAGA 59.006 41.667 24.39 9.71 37.43 3.02
290 328 4.153835 GGTCAAAAGAGATCTCACTGCAAG 59.846 45.833 24.39 7.65 42.29 4.01
291 329 4.067896 GGTCAAAAGAGATCTCACTGCAA 58.932 43.478 24.39 2.83 0.00 4.08
292 330 3.326006 AGGTCAAAAGAGATCTCACTGCA 59.674 43.478 24.39 2.71 0.00 4.41
293 331 3.936564 AGGTCAAAAGAGATCTCACTGC 58.063 45.455 24.39 12.73 0.00 4.40
294 332 5.178996 CACAAGGTCAAAAGAGATCTCACTG 59.821 44.000 24.39 16.72 0.00 3.66
295 333 5.163258 ACACAAGGTCAAAAGAGATCTCACT 60.163 40.000 24.39 8.45 0.00 3.41
296 334 5.059833 ACACAAGGTCAAAAGAGATCTCAC 58.940 41.667 24.39 12.84 0.00 3.51
297 335 5.296151 ACACAAGGTCAAAAGAGATCTCA 57.704 39.130 24.39 0.16 0.00 3.27
298 336 6.625873 AAACACAAGGTCAAAAGAGATCTC 57.374 37.500 15.29 15.29 0.00 2.75
299 337 7.410120 AAAAACACAAGGTCAAAAGAGATCT 57.590 32.000 0.00 0.00 0.00 2.75
320 358 6.754675 GCACAAGGTAAAAACAGCTCTAAAAA 59.245 34.615 0.00 0.00 0.00 1.94
321 359 6.096282 AGCACAAGGTAAAAACAGCTCTAAAA 59.904 34.615 0.00 0.00 0.00 1.52
322 360 5.592688 AGCACAAGGTAAAAACAGCTCTAAA 59.407 36.000 0.00 0.00 0.00 1.85
323 361 5.130350 AGCACAAGGTAAAAACAGCTCTAA 58.870 37.500 0.00 0.00 0.00 2.10
324 362 4.714632 AGCACAAGGTAAAAACAGCTCTA 58.285 39.130 0.00 0.00 0.00 2.43
325 363 3.555966 AGCACAAGGTAAAAACAGCTCT 58.444 40.909 0.00 0.00 0.00 4.09
326 364 3.990318 AGCACAAGGTAAAAACAGCTC 57.010 42.857 0.00 0.00 0.00 4.09
327 365 4.736126 AAAGCACAAGGTAAAAACAGCT 57.264 36.364 0.00 0.00 0.00 4.24
328 366 4.629634 ACAAAAGCACAAGGTAAAAACAGC 59.370 37.500 0.00 0.00 0.00 4.40
329 367 5.866633 TCACAAAAGCACAAGGTAAAAACAG 59.133 36.000 0.00 0.00 0.00 3.16
330 368 5.784177 TCACAAAAGCACAAGGTAAAAACA 58.216 33.333 0.00 0.00 0.00 2.83
331 369 6.096695 TCTCACAAAAGCACAAGGTAAAAAC 58.903 36.000 0.00 0.00 0.00 2.43
332 370 6.274157 TCTCACAAAAGCACAAGGTAAAAA 57.726 33.333 0.00 0.00 0.00 1.94
333 371 5.906113 TCTCACAAAAGCACAAGGTAAAA 57.094 34.783 0.00 0.00 0.00 1.52
334 372 5.417580 ACTTCTCACAAAAGCACAAGGTAAA 59.582 36.000 0.00 0.00 0.00 2.01
335 373 4.947388 ACTTCTCACAAAAGCACAAGGTAA 59.053 37.500 0.00 0.00 0.00 2.85
336 374 4.523083 ACTTCTCACAAAAGCACAAGGTA 58.477 39.130 0.00 0.00 0.00 3.08
337 375 3.356290 ACTTCTCACAAAAGCACAAGGT 58.644 40.909 0.00 0.00 0.00 3.50
338 376 4.552767 CGTACTTCTCACAAAAGCACAAGG 60.553 45.833 0.00 0.00 0.00 3.61
339 377 4.034048 ACGTACTTCTCACAAAAGCACAAG 59.966 41.667 0.00 0.00 0.00 3.16
340 378 3.936453 ACGTACTTCTCACAAAAGCACAA 59.064 39.130 0.00 0.00 0.00 3.33
341 379 3.527533 ACGTACTTCTCACAAAAGCACA 58.472 40.909 0.00 0.00 0.00 4.57
342 380 5.646467 TTACGTACTTCTCACAAAAGCAC 57.354 39.130 0.00 0.00 0.00 4.40
343 381 6.259167 ACATTTACGTACTTCTCACAAAAGCA 59.741 34.615 0.00 0.00 0.00 3.91
344 382 6.656003 ACATTTACGTACTTCTCACAAAAGC 58.344 36.000 0.00 0.00 0.00 3.51
345 383 9.188588 TCTACATTTACGTACTTCTCACAAAAG 57.811 33.333 0.00 0.00 0.00 2.27
346 384 9.701098 ATCTACATTTACGTACTTCTCACAAAA 57.299 29.630 0.00 0.00 0.00 2.44
347 385 9.135843 CATCTACATTTACGTACTTCTCACAAA 57.864 33.333 0.00 0.00 0.00 2.83
348 386 8.301720 ACATCTACATTTACGTACTTCTCACAA 58.698 33.333 0.00 0.00 0.00 3.33
349 387 7.823665 ACATCTACATTTACGTACTTCTCACA 58.176 34.615 0.00 0.00 0.00 3.58
350 388 8.182881 AGACATCTACATTTACGTACTTCTCAC 58.817 37.037 0.00 0.00 0.00 3.51
351 389 8.277490 AGACATCTACATTTACGTACTTCTCA 57.723 34.615 0.00 0.00 0.00 3.27
352 390 9.570488 AAAGACATCTACATTTACGTACTTCTC 57.430 33.333 0.00 0.00 0.00 2.87
353 391 9.924650 AAAAGACATCTACATTTACGTACTTCT 57.075 29.630 0.00 0.00 0.00 2.85
383 421 2.959030 AGAGTCAAAGGGGCAAAAAGAC 59.041 45.455 0.00 0.00 0.00 3.01
384 422 2.958355 CAGAGTCAAAGGGGCAAAAAGA 59.042 45.455 0.00 0.00 0.00 2.52
385 423 2.036346 CCAGAGTCAAAGGGGCAAAAAG 59.964 50.000 0.00 0.00 0.00 2.27
386 424 2.038659 CCAGAGTCAAAGGGGCAAAAA 58.961 47.619 0.00 0.00 0.00 1.94
387 425 1.216678 TCCAGAGTCAAAGGGGCAAAA 59.783 47.619 0.00 0.00 0.00 2.44
388 426 0.850100 TCCAGAGTCAAAGGGGCAAA 59.150 50.000 0.00 0.00 0.00 3.68
389 427 0.850100 TTCCAGAGTCAAAGGGGCAA 59.150 50.000 0.00 0.00 0.00 4.52
390 428 0.850100 TTTCCAGAGTCAAAGGGGCA 59.150 50.000 0.00 0.00 0.00 5.36
391 429 2.222227 ATTTCCAGAGTCAAAGGGGC 57.778 50.000 0.00 0.00 0.00 5.80
392 430 5.509498 TCATAATTTCCAGAGTCAAAGGGG 58.491 41.667 0.00 0.00 0.00 4.79
393 431 6.434028 TGTTCATAATTTCCAGAGTCAAAGGG 59.566 38.462 0.00 0.00 0.00 3.95
394 432 7.362401 CCTGTTCATAATTTCCAGAGTCAAAGG 60.362 40.741 0.00 0.00 0.00 3.11
395 433 7.533426 CCTGTTCATAATTTCCAGAGTCAAAG 58.467 38.462 0.00 0.00 0.00 2.77
396 434 6.071952 GCCTGTTCATAATTTCCAGAGTCAAA 60.072 38.462 0.00 0.00 0.00 2.69
397 435 5.415701 GCCTGTTCATAATTTCCAGAGTCAA 59.584 40.000 0.00 0.00 0.00 3.18
398 436 4.943705 GCCTGTTCATAATTTCCAGAGTCA 59.056 41.667 0.00 0.00 0.00 3.41
399 437 5.189180 AGCCTGTTCATAATTTCCAGAGTC 58.811 41.667 0.00 0.00 0.00 3.36
400 438 5.184892 AGCCTGTTCATAATTTCCAGAGT 57.815 39.130 0.00 0.00 0.00 3.24
401 439 5.678107 GCAAGCCTGTTCATAATTTCCAGAG 60.678 44.000 0.00 0.00 0.00 3.35
402 440 4.158394 GCAAGCCTGTTCATAATTTCCAGA 59.842 41.667 0.00 0.00 0.00 3.86
403 441 4.082081 TGCAAGCCTGTTCATAATTTCCAG 60.082 41.667 0.00 0.00 0.00 3.86
404 442 3.831333 TGCAAGCCTGTTCATAATTTCCA 59.169 39.130 0.00 0.00 0.00 3.53
405 443 4.427312 CTGCAAGCCTGTTCATAATTTCC 58.573 43.478 0.00 0.00 0.00 3.13
406 444 4.427312 CCTGCAAGCCTGTTCATAATTTC 58.573 43.478 0.00 0.00 0.00 2.17
407 445 3.368739 GCCTGCAAGCCTGTTCATAATTT 60.369 43.478 0.00 0.00 0.00 1.82
408 446 2.167075 GCCTGCAAGCCTGTTCATAATT 59.833 45.455 0.00 0.00 0.00 1.40
409 447 1.753073 GCCTGCAAGCCTGTTCATAAT 59.247 47.619 0.00 0.00 0.00 1.28
410 448 1.176527 GCCTGCAAGCCTGTTCATAA 58.823 50.000 0.00 0.00 0.00 1.90
411 449 0.329261 AGCCTGCAAGCCTGTTCATA 59.671 50.000 3.00 0.00 0.00 2.15
412 450 0.541296 AAGCCTGCAAGCCTGTTCAT 60.541 50.000 3.00 0.00 0.00 2.57
413 451 0.756442 AAAGCCTGCAAGCCTGTTCA 60.756 50.000 3.00 0.00 0.00 3.18
414 452 0.390492 AAAAGCCTGCAAGCCTGTTC 59.610 50.000 3.00 0.00 0.00 3.18
415 453 0.832626 AAAAAGCCTGCAAGCCTGTT 59.167 45.000 3.00 0.00 0.00 3.16
416 454 2.519937 AAAAAGCCTGCAAGCCTGT 58.480 47.368 3.00 0.00 0.00 4.00
433 471 1.511613 TGAACCAATGGGGCCAAAAA 58.488 45.000 4.39 0.00 42.05 1.94
434 472 1.419387 CTTGAACCAATGGGGCCAAAA 59.581 47.619 4.39 0.00 42.05 2.44
435 473 1.055040 CTTGAACCAATGGGGCCAAA 58.945 50.000 4.39 0.00 42.05 3.28
436 474 0.105246 ACTTGAACCAATGGGGCCAA 60.105 50.000 4.39 0.00 42.05 4.52
437 475 0.831288 CACTTGAACCAATGGGGCCA 60.831 55.000 4.39 0.00 42.05 5.36
438 476 0.831711 ACACTTGAACCAATGGGGCC 60.832 55.000 3.55 0.00 42.05 5.80
439 477 1.047801 AACACTTGAACCAATGGGGC 58.952 50.000 3.55 0.00 42.05 5.80
440 478 2.965147 AGAAACACTTGAACCAATGGGG 59.035 45.455 3.55 0.00 44.81 4.96
441 479 3.636300 TGAGAAACACTTGAACCAATGGG 59.364 43.478 3.55 0.00 41.29 4.00
442 480 4.580167 TCTGAGAAACACTTGAACCAATGG 59.420 41.667 0.00 0.00 0.00 3.16
443 481 5.756195 TCTGAGAAACACTTGAACCAATG 57.244 39.130 0.00 0.00 0.00 2.82
444 482 5.829924 ACATCTGAGAAACACTTGAACCAAT 59.170 36.000 0.00 0.00 0.00 3.16
445 483 5.192927 ACATCTGAGAAACACTTGAACCAA 58.807 37.500 0.00 0.00 0.00 3.67
446 484 4.780815 ACATCTGAGAAACACTTGAACCA 58.219 39.130 0.00 0.00 0.00 3.67
447 485 5.296780 TCAACATCTGAGAAACACTTGAACC 59.703 40.000 0.00 0.00 0.00 3.62
448 486 6.363577 TCAACATCTGAGAAACACTTGAAC 57.636 37.500 0.00 0.00 0.00 3.18
461 499 2.502947 AGCCTACATGCTCAACATCTGA 59.497 45.455 0.00 0.00 36.75 3.27
462 500 2.915349 AGCCTACATGCTCAACATCTG 58.085 47.619 0.00 0.00 36.75 2.90
463 501 3.539604 GAAGCCTACATGCTCAACATCT 58.460 45.455 0.00 0.00 41.80 2.90
464 502 2.615912 GGAAGCCTACATGCTCAACATC 59.384 50.000 0.00 0.00 41.80 3.06
465 503 2.648059 GGAAGCCTACATGCTCAACAT 58.352 47.619 0.00 0.00 41.80 2.71
466 504 1.340017 GGGAAGCCTACATGCTCAACA 60.340 52.381 0.00 0.00 41.80 3.33
467 505 1.383523 GGGAAGCCTACATGCTCAAC 58.616 55.000 0.00 0.00 41.80 3.18
468 506 0.255890 GGGGAAGCCTACATGCTCAA 59.744 55.000 0.00 0.00 41.80 3.02
469 507 1.635817 GGGGGAAGCCTACATGCTCA 61.636 60.000 0.00 0.00 41.80 4.26
470 508 1.149401 GGGGGAAGCCTACATGCTC 59.851 63.158 0.00 0.00 41.80 4.26
471 509 1.308216 AGGGGGAAGCCTACATGCT 60.308 57.895 0.00 0.00 45.43 3.79
472 510 1.152881 CAGGGGGAAGCCTACATGC 60.153 63.158 0.00 0.00 0.00 4.06
473 511 1.152881 GCAGGGGGAAGCCTACATG 60.153 63.158 0.00 0.00 0.00 3.21
474 512 3.335711 GCAGGGGGAAGCCTACAT 58.664 61.111 0.00 0.00 0.00 2.29
482 520 4.995058 AACGAGGGGCAGGGGGAA 62.995 66.667 0.00 0.00 0.00 3.97
483 521 2.850851 ATAAACGAGGGGCAGGGGGA 62.851 60.000 0.00 0.00 0.00 4.81
484 522 2.383601 ATAAACGAGGGGCAGGGGG 61.384 63.158 0.00 0.00 0.00 5.40
485 523 1.152963 CATAAACGAGGGGCAGGGG 60.153 63.158 0.00 0.00 0.00 4.79
486 524 0.034477 AACATAAACGAGGGGCAGGG 60.034 55.000 0.00 0.00 0.00 4.45
487 525 1.834188 AAACATAAACGAGGGGCAGG 58.166 50.000 0.00 0.00 0.00 4.85
488 526 3.934457 AAAAACATAAACGAGGGGCAG 57.066 42.857 0.00 0.00 0.00 4.85
507 545 7.338449 AGACTAGACCAGCTACAAAAACAAAAA 59.662 33.333 0.00 0.00 0.00 1.94
508 546 6.826741 AGACTAGACCAGCTACAAAAACAAAA 59.173 34.615 0.00 0.00 0.00 2.44
509 547 6.260050 CAGACTAGACCAGCTACAAAAACAAA 59.740 38.462 0.00 0.00 0.00 2.83
510 548 5.758296 CAGACTAGACCAGCTACAAAAACAA 59.242 40.000 0.00 0.00 0.00 2.83
511 549 5.297547 CAGACTAGACCAGCTACAAAAACA 58.702 41.667 0.00 0.00 0.00 2.83
512 550 4.691216 CCAGACTAGACCAGCTACAAAAAC 59.309 45.833 0.00 0.00 0.00 2.43
513 551 4.802918 GCCAGACTAGACCAGCTACAAAAA 60.803 45.833 0.00 0.00 0.00 1.94
514 552 3.306780 GCCAGACTAGACCAGCTACAAAA 60.307 47.826 0.00 0.00 0.00 2.44
515 553 2.233922 GCCAGACTAGACCAGCTACAAA 59.766 50.000 0.00 0.00 0.00 2.83
516 554 1.825474 GCCAGACTAGACCAGCTACAA 59.175 52.381 0.00 0.00 0.00 2.41
517 555 1.475403 GCCAGACTAGACCAGCTACA 58.525 55.000 0.00 0.00 0.00 2.74
518 556 0.747852 GGCCAGACTAGACCAGCTAC 59.252 60.000 0.00 0.00 0.00 3.58
519 557 0.752009 CGGCCAGACTAGACCAGCTA 60.752 60.000 2.24 0.00 0.00 3.32
520 558 2.055042 CGGCCAGACTAGACCAGCT 61.055 63.158 2.24 0.00 0.00 4.24
521 559 2.496817 CGGCCAGACTAGACCAGC 59.503 66.667 2.24 0.00 0.00 4.85
522 560 1.668101 GACCGGCCAGACTAGACCAG 61.668 65.000 0.00 0.00 0.00 4.00
523 561 1.681327 GACCGGCCAGACTAGACCA 60.681 63.158 0.00 0.00 0.00 4.02
524 562 2.772691 CGACCGGCCAGACTAGACC 61.773 68.421 0.00 0.00 0.00 3.85
525 563 1.310933 TTCGACCGGCCAGACTAGAC 61.311 60.000 0.00 0.00 0.00 2.59
526 564 0.395311 ATTCGACCGGCCAGACTAGA 60.395 55.000 0.00 0.00 0.00 2.43
527 565 0.460311 AATTCGACCGGCCAGACTAG 59.540 55.000 0.00 0.00 0.00 2.57
528 566 0.899720 AAATTCGACCGGCCAGACTA 59.100 50.000 0.00 0.00 0.00 2.59
529 567 0.673644 CAAATTCGACCGGCCAGACT 60.674 55.000 0.00 0.00 0.00 3.24
530 568 0.953960 ACAAATTCGACCGGCCAGAC 60.954 55.000 0.00 0.00 0.00 3.51
531 569 0.250553 AACAAATTCGACCGGCCAGA 60.251 50.000 0.00 0.00 0.00 3.86
532 570 0.596082 AAACAAATTCGACCGGCCAG 59.404 50.000 0.00 0.00 0.00 4.85
533 571 0.312416 CAAACAAATTCGACCGGCCA 59.688 50.000 0.00 0.00 0.00 5.36
534 572 0.388006 CCAAACAAATTCGACCGGCC 60.388 55.000 0.00 0.00 0.00 6.13
535 573 1.006825 GCCAAACAAATTCGACCGGC 61.007 55.000 0.00 0.00 0.00 6.13
536 574 0.388006 GGCCAAACAAATTCGACCGG 60.388 55.000 0.00 0.00 0.00 5.28
537 575 0.312416 TGGCCAAACAAATTCGACCG 59.688 50.000 0.61 0.00 0.00 4.79
538 576 1.604438 GGTGGCCAAACAAATTCGACC 60.604 52.381 7.24 0.00 0.00 4.79
539 577 1.604438 GGGTGGCCAAACAAATTCGAC 60.604 52.381 7.24 0.00 0.00 4.20
540 578 0.676736 GGGTGGCCAAACAAATTCGA 59.323 50.000 7.24 0.00 0.00 3.71
541 579 0.665972 CGGGTGGCCAAACAAATTCG 60.666 55.000 7.24 0.00 0.00 3.34
542 580 0.320334 CCGGGTGGCCAAACAAATTC 60.320 55.000 7.24 0.00 0.00 2.17
543 581 1.051556 ACCGGGTGGCCAAACAAATT 61.052 50.000 7.24 0.00 39.70 1.82
544 582 1.458588 ACCGGGTGGCCAAACAAAT 60.459 52.632 7.24 0.00 39.70 2.32
545 583 2.042843 ACCGGGTGGCCAAACAAA 60.043 55.556 7.24 0.00 39.70 2.83
546 584 2.835431 CACCGGGTGGCCAAACAA 60.835 61.111 19.63 0.00 39.70 2.83
547 585 3.360423 TTCACCGGGTGGCCAAACA 62.360 57.895 26.07 2.72 39.70 2.83
548 586 2.519780 TTCACCGGGTGGCCAAAC 60.520 61.111 26.07 2.86 39.70 2.93
549 587 2.519780 GTTCACCGGGTGGCCAAA 60.520 61.111 26.07 10.89 39.70 3.28
550 588 4.939368 CGTTCACCGGGTGGCCAA 62.939 66.667 26.07 11.25 39.70 4.52
569 607 0.249741 CTTGGGCCTTATCCGTACGG 60.250 60.000 28.66 28.66 0.00 4.02
570 608 0.878961 GCTTGGGCCTTATCCGTACG 60.879 60.000 8.69 8.69 0.00 3.67
571 609 0.878961 CGCTTGGGCCTTATCCGTAC 60.879 60.000 4.53 0.00 34.44 3.67
572 610 1.332144 ACGCTTGGGCCTTATCCGTA 61.332 55.000 4.53 0.00 34.44 4.02
573 611 2.189521 CGCTTGGGCCTTATCCGT 59.810 61.111 4.53 0.00 34.44 4.69
574 612 2.180204 CACGCTTGGGCCTTATCCG 61.180 63.158 4.53 2.06 34.44 4.18
575 613 1.095807 GTCACGCTTGGGCCTTATCC 61.096 60.000 4.53 0.00 34.44 2.59
576 614 0.392461 TGTCACGCTTGGGCCTTATC 60.392 55.000 4.53 0.00 34.44 1.75
577 615 0.037590 TTGTCACGCTTGGGCCTTAT 59.962 50.000 4.53 0.00 34.44 1.73
578 616 0.037590 ATTGTCACGCTTGGGCCTTA 59.962 50.000 4.53 0.00 34.44 2.69
579 617 1.228552 ATTGTCACGCTTGGGCCTT 60.229 52.632 4.53 0.00 34.44 4.35
580 618 1.973281 CATTGTCACGCTTGGGCCT 60.973 57.895 4.53 0.00 34.44 5.19
581 619 2.568090 CATTGTCACGCTTGGGCC 59.432 61.111 0.00 0.00 34.44 5.80
582 620 1.315257 ATCCATTGTCACGCTTGGGC 61.315 55.000 0.00 0.00 0.00 5.36
583 621 0.734889 GATCCATTGTCACGCTTGGG 59.265 55.000 0.00 0.00 0.00 4.12
584 622 1.452110 TGATCCATTGTCACGCTTGG 58.548 50.000 0.00 0.00 0.00 3.61
585 623 2.679336 TCATGATCCATTGTCACGCTTG 59.321 45.455 0.00 0.00 0.00 4.01
586 624 2.989909 TCATGATCCATTGTCACGCTT 58.010 42.857 0.00 0.00 0.00 4.68
587 625 2.696989 TCATGATCCATTGTCACGCT 57.303 45.000 0.00 0.00 0.00 5.07
588 626 2.938451 TCTTCATGATCCATTGTCACGC 59.062 45.455 0.00 0.00 0.00 5.34
589 627 5.550232 TTTCTTCATGATCCATTGTCACG 57.450 39.130 0.00 0.00 0.00 4.35
590 628 7.025963 GTCTTTTCTTCATGATCCATTGTCAC 58.974 38.462 0.00 0.00 0.00 3.67
591 629 6.716173 TGTCTTTTCTTCATGATCCATTGTCA 59.284 34.615 0.00 0.00 0.00 3.58
592 630 7.025963 GTGTCTTTTCTTCATGATCCATTGTC 58.974 38.462 0.00 0.00 0.00 3.18
593 631 6.491062 TGTGTCTTTTCTTCATGATCCATTGT 59.509 34.615 0.00 0.00 0.00 2.71
594 632 6.805271 GTGTGTCTTTTCTTCATGATCCATTG 59.195 38.462 0.00 0.00 0.00 2.82
595 633 6.491062 TGTGTGTCTTTTCTTCATGATCCATT 59.509 34.615 0.00 0.00 0.00 3.16
596 634 6.005823 TGTGTGTCTTTTCTTCATGATCCAT 58.994 36.000 0.00 0.00 0.00 3.41
597 635 5.375773 TGTGTGTCTTTTCTTCATGATCCA 58.624 37.500 0.00 0.00 0.00 3.41
598 636 5.618640 GCTGTGTGTCTTTTCTTCATGATCC 60.619 44.000 0.00 0.00 0.00 3.36
599 637 5.388944 GCTGTGTGTCTTTTCTTCATGATC 58.611 41.667 0.00 0.00 0.00 2.92
600 638 4.083643 CGCTGTGTGTCTTTTCTTCATGAT 60.084 41.667 0.00 0.00 0.00 2.45
601 639 3.248363 CGCTGTGTGTCTTTTCTTCATGA 59.752 43.478 0.00 0.00 0.00 3.07
602 640 3.548587 CGCTGTGTGTCTTTTCTTCATG 58.451 45.455 0.00 0.00 0.00 3.07
603 641 2.031682 GCGCTGTGTGTCTTTTCTTCAT 60.032 45.455 0.00 0.00 0.00 2.57
604 642 1.330521 GCGCTGTGTGTCTTTTCTTCA 59.669 47.619 0.00 0.00 0.00 3.02
605 643 1.657538 CGCGCTGTGTGTCTTTTCTTC 60.658 52.381 5.56 0.00 0.00 2.87
606 644 0.304705 CGCGCTGTGTGTCTTTTCTT 59.695 50.000 5.56 0.00 0.00 2.52
607 645 1.498865 CCGCGCTGTGTGTCTTTTCT 61.499 55.000 5.56 0.00 0.00 2.52
608 646 1.082756 CCGCGCTGTGTGTCTTTTC 60.083 57.895 5.56 0.00 0.00 2.29
609 647 3.022287 CCGCGCTGTGTGTCTTTT 58.978 55.556 5.56 0.00 0.00 2.27
610 648 3.649986 GCCGCGCTGTGTGTCTTT 61.650 61.111 5.56 0.00 0.00 2.52
611 649 4.908687 TGCCGCGCTGTGTGTCTT 62.909 61.111 5.56 0.00 0.00 3.01
618 656 4.082523 ATGTACCTGCCGCGCTGT 62.083 61.111 5.56 0.00 0.00 4.40
619 657 3.566853 CATGTACCTGCCGCGCTG 61.567 66.667 5.56 0.00 0.00 5.18
620 658 4.838152 CCATGTACCTGCCGCGCT 62.838 66.667 5.56 0.00 0.00 5.92
621 659 4.830765 TCCATGTACCTGCCGCGC 62.831 66.667 0.00 0.00 0.00 6.86
622 660 2.890474 GTCCATGTACCTGCCGCG 60.890 66.667 0.00 0.00 0.00 6.46
623 661 0.105964 TATGTCCATGTACCTGCCGC 59.894 55.000 0.00 0.00 0.00 6.53
624 662 1.138069 TGTATGTCCATGTACCTGCCG 59.862 52.381 0.00 0.00 0.00 5.69
625 663 3.275617 TTGTATGTCCATGTACCTGCC 57.724 47.619 0.00 0.00 0.00 4.85
626 664 5.637006 TTTTTGTATGTCCATGTACCTGC 57.363 39.130 0.00 0.00 0.00 4.85
627 665 6.966632 CGAATTTTTGTATGTCCATGTACCTG 59.033 38.462 0.00 0.00 0.00 4.00
628 666 6.882140 TCGAATTTTTGTATGTCCATGTACCT 59.118 34.615 0.00 0.00 0.00 3.08
629 667 6.964934 GTCGAATTTTTGTATGTCCATGTACC 59.035 38.462 0.00 0.00 0.00 3.34
630 668 7.692291 CAGTCGAATTTTTGTATGTCCATGTAC 59.308 37.037 0.00 0.00 0.00 2.90
631 669 7.604545 TCAGTCGAATTTTTGTATGTCCATGTA 59.395 33.333 0.00 0.00 0.00 2.29
632 670 6.429692 TCAGTCGAATTTTTGTATGTCCATGT 59.570 34.615 0.00 0.00 0.00 3.21
633 671 6.841119 TCAGTCGAATTTTTGTATGTCCATG 58.159 36.000 0.00 0.00 0.00 3.66
634 672 7.447374 TTCAGTCGAATTTTTGTATGTCCAT 57.553 32.000 0.00 0.00 0.00 3.41
635 673 6.567701 GCTTCAGTCGAATTTTTGTATGTCCA 60.568 38.462 0.00 0.00 0.00 4.02
636 674 5.795441 GCTTCAGTCGAATTTTTGTATGTCC 59.205 40.000 0.00 0.00 0.00 4.02
637 675 6.603095 AGCTTCAGTCGAATTTTTGTATGTC 58.397 36.000 0.00 0.00 0.00 3.06
638 676 6.560253 AGCTTCAGTCGAATTTTTGTATGT 57.440 33.333 0.00 0.00 0.00 2.29
639 677 8.948853 TTAAGCTTCAGTCGAATTTTTGTATG 57.051 30.769 0.00 0.00 0.00 2.39
642 680 9.959749 TTAATTAAGCTTCAGTCGAATTTTTGT 57.040 25.926 0.00 0.00 0.00 2.83
649 687 9.825972 CTGAAATTTAATTAAGCTTCAGTCGAA 57.174 29.630 25.55 0.00 34.46 3.71
650 688 9.214957 TCTGAAATTTAATTAAGCTTCAGTCGA 57.785 29.630 28.66 18.55 37.20 4.20
651 689 9.267096 GTCTGAAATTTAATTAAGCTTCAGTCG 57.733 33.333 28.66 17.38 37.20 4.18
652 690 9.267096 CGTCTGAAATTTAATTAAGCTTCAGTC 57.733 33.333 28.66 25.31 37.20 3.51
653 691 8.237267 CCGTCTGAAATTTAATTAAGCTTCAGT 58.763 33.333 28.66 0.00 37.20 3.41
654 692 8.450964 TCCGTCTGAAATTTAATTAAGCTTCAG 58.549 33.333 26.69 26.69 37.22 3.02
655 693 8.330466 TCCGTCTGAAATTTAATTAAGCTTCA 57.670 30.769 0.00 16.83 0.00 3.02
656 694 9.226345 CATCCGTCTGAAATTTAATTAAGCTTC 57.774 33.333 0.00 11.62 0.00 3.86
657 695 7.702348 GCATCCGTCTGAAATTTAATTAAGCTT 59.298 33.333 3.48 3.48 0.00 3.74
658 696 7.067494 AGCATCCGTCTGAAATTTAATTAAGCT 59.933 33.333 0.00 0.00 0.00 3.74
659 697 7.196331 AGCATCCGTCTGAAATTTAATTAAGC 58.804 34.615 0.00 0.00 0.00 3.09
665 703 9.607988 TCTATTTAGCATCCGTCTGAAATTTAA 57.392 29.630 0.00 0.00 0.00 1.52
666 704 9.042008 GTCTATTTAGCATCCGTCTGAAATTTA 57.958 33.333 0.00 0.00 0.00 1.40
667 705 7.552687 TGTCTATTTAGCATCCGTCTGAAATTT 59.447 33.333 0.00 0.00 0.00 1.82
668 706 7.047891 TGTCTATTTAGCATCCGTCTGAAATT 58.952 34.615 0.00 0.00 0.00 1.82
669 707 6.582636 TGTCTATTTAGCATCCGTCTGAAAT 58.417 36.000 0.00 0.00 0.00 2.17
670 708 5.972935 TGTCTATTTAGCATCCGTCTGAAA 58.027 37.500 0.00 0.00 0.00 2.69
671 709 5.127194 ACTGTCTATTTAGCATCCGTCTGAA 59.873 40.000 0.00 0.00 0.00 3.02
672 710 4.645136 ACTGTCTATTTAGCATCCGTCTGA 59.355 41.667 0.00 0.00 0.00 3.27
673 711 4.938080 ACTGTCTATTTAGCATCCGTCTG 58.062 43.478 0.00 0.00 0.00 3.51
674 712 4.038162 GGACTGTCTATTTAGCATCCGTCT 59.962 45.833 7.85 0.00 0.00 4.18
675 713 4.038162 AGGACTGTCTATTTAGCATCCGTC 59.962 45.833 7.85 0.00 0.00 4.79
676 714 3.961408 AGGACTGTCTATTTAGCATCCGT 59.039 43.478 7.85 0.00 0.00 4.69
677 715 4.592485 AGGACTGTCTATTTAGCATCCG 57.408 45.455 7.85 0.00 0.00 4.18
678 716 8.732746 TTTTAAGGACTGTCTATTTAGCATCC 57.267 34.615 7.85 0.00 0.00 3.51
703 741 7.355778 GTCTTGTGAACTCGATCAATCTTTTT 58.644 34.615 0.00 0.00 0.00 1.94
704 742 6.073003 GGTCTTGTGAACTCGATCAATCTTTT 60.073 38.462 0.00 0.00 0.00 2.27
705 743 5.409826 GGTCTTGTGAACTCGATCAATCTTT 59.590 40.000 0.00 0.00 0.00 2.52
706 744 4.932200 GGTCTTGTGAACTCGATCAATCTT 59.068 41.667 0.00 0.00 0.00 2.40
707 745 4.021104 TGGTCTTGTGAACTCGATCAATCT 60.021 41.667 0.00 0.00 0.00 2.40
708 746 4.245660 TGGTCTTGTGAACTCGATCAATC 58.754 43.478 0.00 0.00 0.00 2.67
709 747 4.271696 TGGTCTTGTGAACTCGATCAAT 57.728 40.909 0.00 0.00 0.00 2.57
710 748 3.744238 TGGTCTTGTGAACTCGATCAA 57.256 42.857 0.00 0.00 0.00 2.57
711 749 3.744238 TTGGTCTTGTGAACTCGATCA 57.256 42.857 0.00 0.00 0.00 2.92
712 750 3.807622 TGTTTGGTCTTGTGAACTCGATC 59.192 43.478 0.00 0.00 0.00 3.69
713 751 3.804036 TGTTTGGTCTTGTGAACTCGAT 58.196 40.909 0.00 0.00 0.00 3.59
714 752 3.254470 TGTTTGGTCTTGTGAACTCGA 57.746 42.857 0.00 0.00 0.00 4.04
715 753 4.349663 TTTGTTTGGTCTTGTGAACTCG 57.650 40.909 0.00 0.00 0.00 4.18
716 754 7.027778 AGTATTTGTTTGGTCTTGTGAACTC 57.972 36.000 0.00 0.00 0.00 3.01
717 755 7.012989 GGTAGTATTTGTTTGGTCTTGTGAACT 59.987 37.037 0.00 0.00 0.00 3.01
718 756 7.136772 GGTAGTATTTGTTTGGTCTTGTGAAC 58.863 38.462 0.00 0.00 0.00 3.18
719 757 6.829298 TGGTAGTATTTGTTTGGTCTTGTGAA 59.171 34.615 0.00 0.00 0.00 3.18
720 758 6.261381 GTGGTAGTATTTGTTTGGTCTTGTGA 59.739 38.462 0.00 0.00 0.00 3.58
721 759 6.435428 GTGGTAGTATTTGTTTGGTCTTGTG 58.565 40.000 0.00 0.00 0.00 3.33
722 760 5.533528 GGTGGTAGTATTTGTTTGGTCTTGT 59.466 40.000 0.00 0.00 0.00 3.16
723 761 5.048294 GGGTGGTAGTATTTGTTTGGTCTTG 60.048 44.000 0.00 0.00 0.00 3.02
724 762 5.074804 GGGTGGTAGTATTTGTTTGGTCTT 58.925 41.667 0.00 0.00 0.00 3.01
725 763 4.105057 TGGGTGGTAGTATTTGTTTGGTCT 59.895 41.667 0.00 0.00 0.00 3.85
726 764 4.400120 TGGGTGGTAGTATTTGTTTGGTC 58.600 43.478 0.00 0.00 0.00 4.02
727 765 4.141111 ACTGGGTGGTAGTATTTGTTTGGT 60.141 41.667 0.00 0.00 0.00 3.67
728 766 4.403734 ACTGGGTGGTAGTATTTGTTTGG 58.596 43.478 0.00 0.00 0.00 3.28
729 767 6.150474 CCTTACTGGGTGGTAGTATTTGTTTG 59.850 42.308 0.00 0.00 31.27 2.93
730 768 6.183361 ACCTTACTGGGTGGTAGTATTTGTTT 60.183 38.462 0.00 0.00 41.11 2.83
731 769 5.311385 ACCTTACTGGGTGGTAGTATTTGTT 59.689 40.000 0.00 0.00 41.11 2.83
732 770 4.848086 ACCTTACTGGGTGGTAGTATTTGT 59.152 41.667 0.00 0.00 41.11 2.83
733 771 5.431179 ACCTTACTGGGTGGTAGTATTTG 57.569 43.478 0.00 0.00 41.11 2.32
744 782 0.112412 CAAAGGCCACCTTACTGGGT 59.888 55.000 5.01 0.00 43.92 4.51
745 783 0.404040 TCAAAGGCCACCTTACTGGG 59.596 55.000 5.01 0.00 43.92 4.45
746 784 1.534729 GTCAAAGGCCACCTTACTGG 58.465 55.000 5.01 0.00 43.92 4.00
747 785 1.202879 TGGTCAAAGGCCACCTTACTG 60.203 52.381 5.01 0.00 43.92 2.74
748 786 1.145571 TGGTCAAAGGCCACCTTACT 58.854 50.000 5.01 0.00 43.92 2.24
749 787 3.737702 TGGTCAAAGGCCACCTTAC 57.262 52.632 5.01 0.00 43.92 2.34
755 793 2.203280 CGGTGTGGTCAAAGGCCA 60.203 61.111 5.01 0.00 0.00 5.36
756 794 2.112297 TCGGTGTGGTCAAAGGCC 59.888 61.111 0.00 0.00 0.00 5.19
757 795 2.604174 CGTCGGTGTGGTCAAAGGC 61.604 63.158 0.00 0.00 0.00 4.35
758 796 1.959226 CCGTCGGTGTGGTCAAAGG 60.959 63.158 2.08 0.00 0.00 3.11
759 797 0.531090 TTCCGTCGGTGTGGTCAAAG 60.531 55.000 11.88 0.00 0.00 2.77
760 798 0.810823 GTTCCGTCGGTGTGGTCAAA 60.811 55.000 11.88 0.00 0.00 2.69
761 799 1.227321 GTTCCGTCGGTGTGGTCAA 60.227 57.895 11.88 0.00 0.00 3.18
762 800 2.358193 CTGTTCCGTCGGTGTGGTCA 62.358 60.000 11.88 2.52 0.00 4.02
763 801 1.663702 CTGTTCCGTCGGTGTGGTC 60.664 63.158 11.88 0.00 0.00 4.02
764 802 2.083835 CTCTGTTCCGTCGGTGTGGT 62.084 60.000 11.88 0.00 0.00 4.16
765 803 1.372997 CTCTGTTCCGTCGGTGTGG 60.373 63.158 11.88 1.20 0.00 4.17
766 804 2.022129 GCTCTGTTCCGTCGGTGTG 61.022 63.158 11.88 0.81 0.00 3.82
767 805 2.338984 GCTCTGTTCCGTCGGTGT 59.661 61.111 11.88 0.00 0.00 4.16
805 843 1.906574 ACGTAGGCTCCTTTTCCATGA 59.093 47.619 0.00 0.00 0.00 3.07
811 849 3.671716 CAAAGGTACGTAGGCTCCTTTT 58.328 45.455 19.81 5.18 44.59 2.27
886 924 0.742505 TCCATATCCGTCGTGTCACC 59.257 55.000 0.00 0.00 0.00 4.02
966 1011 5.118050 TCGCACAACGCTATTTATATAGTGC 59.882 40.000 12.11 0.00 44.92 4.40
967 1012 6.362551 ACTCGCACAACGCTATTTATATAGTG 59.637 38.462 10.97 10.97 45.96 2.74
1007 1056 0.453793 CACGGAGCAGGTGTCTCTAG 59.546 60.000 0.00 0.00 0.00 2.43
1020 1069 0.444651 TTTTAAATCGGCGCACGGAG 59.555 50.000 10.83 0.00 44.45 4.63
1514 1568 2.045634 TGGTCGACGAGATCCCGT 60.046 61.111 9.92 0.33 46.43 5.28
1611 1665 2.268920 GGCGGAGAAGATGGTGCA 59.731 61.111 0.00 0.00 0.00 4.57
1666 1720 1.600916 GTCACCACCTGCTGGAACC 60.601 63.158 17.64 0.00 43.95 3.62
1983 2042 6.628856 CGTGCGGAATTTTGAAGTATATCTTG 59.371 38.462 0.00 0.00 36.40 3.02
2038 2103 1.377202 GTGCTTTGATCCCGGCAGA 60.377 57.895 0.00 0.00 35.29 4.26
2179 2251 8.495949 CCATTTAAGCGACAAGTAATATGGTAG 58.504 37.037 0.00 0.00 0.00 3.18
2180 2252 8.205512 TCCATTTAAGCGACAAGTAATATGGTA 58.794 33.333 0.00 0.00 32.62 3.25
2181 2253 7.051623 TCCATTTAAGCGACAAGTAATATGGT 58.948 34.615 0.00 0.00 32.62 3.55
2193 2273 8.345565 ACATCTAAATTCATCCATTTAAGCGAC 58.654 33.333 0.00 0.00 29.99 5.19
2226 2306 6.144080 GTCGTCCAAACAGATGTATATAGCAC 59.856 42.308 0.00 0.00 0.00 4.40
2272 2352 3.616219 CCTTATGAACCGGGACAAATGA 58.384 45.455 6.32 0.00 0.00 2.57
2348 2428 8.637099 GTTAGTATAAGAACCGGGACTAAAGAT 58.363 37.037 6.32 0.10 32.74 2.40
2563 2649 5.046529 CGGAGATAAGAAAGGACACATCTG 58.953 45.833 0.00 0.00 0.00 2.90
2575 2661 3.024547 AGCAGTAGCACGGAGATAAGAA 58.975 45.455 0.00 0.00 45.49 2.52
2607 2693 9.219603 CCTCACTTCAATCTAAGTCATGTTTAA 57.780 33.333 0.00 0.00 37.61 1.52
2644 2730 6.641314 AGGATTAGTATTACTTTCGACATGCG 59.359 38.462 0.85 0.00 42.69 4.73
2821 2907 9.035607 ACGAGTAAAAGTTGTATGATGATGATC 57.964 33.333 0.00 0.00 0.00 2.92
3020 3140 4.331168 GTGAAGCGCAAGAATTAGAGACAT 59.669 41.667 11.47 0.00 43.02 3.06
3027 3147 3.674997 AGGAAGTGAAGCGCAAGAATTA 58.325 40.909 11.47 0.00 43.02 1.40
3125 3248 5.880901 ACTCAACTGTCCATACCAGATTTT 58.119 37.500 0.00 0.00 34.04 1.82


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.