Multiple sequence alignment - TraesCS2A01G527100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G527100 chr2A 100.000 2955 0 0 707 3661 746934748 746931794 0.000000e+00 5457.0
1 TraesCS2A01G527100 chr2A 100.000 330 0 0 1 330 746935454 746935125 8.690000e-171 610.0
2 TraesCS2A01G527100 chr2A 97.838 185 4 0 3477 3661 360443282 360443098 1.640000e-83 320.0
3 TraesCS2A01G527100 chr2A 96.237 186 7 0 3476 3661 360444579 360444394 4.590000e-79 305.0
4 TraesCS2A01G527100 chr2D 89.941 1879 101 47 1202 3025 616937628 616935783 0.000000e+00 2342.0
5 TraesCS2A01G527100 chr2D 89.398 415 18 13 709 1118 616938018 616937625 1.960000e-137 499.0
6 TraesCS2A01G527100 chr2D 79.154 331 30 16 1 321 616938302 616938001 3.730000e-45 193.0
7 TraesCS2A01G527100 chr2D 91.089 101 6 2 1838 1935 10056992 10057092 2.290000e-27 134.0
8 TraesCS2A01G527100 chr2B 90.695 806 48 16 2196 2981 752403778 752402980 0.000000e+00 1048.0
9 TraesCS2A01G527100 chr2B 86.926 719 44 23 709 1391 752405248 752404544 0.000000e+00 761.0
10 TraesCS2A01G527100 chr2B 90.832 469 25 8 1476 1935 752404481 752404022 2.420000e-171 612.0
11 TraesCS2A01G527100 chr2B 87.278 338 24 6 1 321 752405566 752405231 5.780000e-98 368.0
12 TraesCS2A01G527100 chr2B 92.517 147 5 1 1 141 752475614 752475468 4.790000e-49 206.0
13 TraesCS2A01G527100 chr2B 88.757 169 16 3 2043 2211 752403960 752403795 1.720000e-48 204.0
14 TraesCS2A01G527100 chr2B 78.906 256 30 7 3026 3281 467877803 467877572 6.330000e-33 152.0
15 TraesCS2A01G527100 chr3A 98.396 187 3 0 3475 3661 17483253 17483067 2.730000e-86 329.0
16 TraesCS2A01G527100 chr3B 96.757 185 6 0 3477 3661 502644325 502644509 3.550000e-80 309.0
17 TraesCS2A01G527100 chr6A 96.250 160 5 1 3477 3636 171802738 171802580 1.010000e-65 261.0
18 TraesCS2A01G527100 chr4A 85.537 242 21 3 3020 3261 590934661 590934888 1.310000e-59 241.0
19 TraesCS2A01G527100 chr7B 85.981 214 16 4 3056 3269 713044940 713045139 2.210000e-52 217.0
20 TraesCS2A01G527100 chr7B 79.297 256 30 6 3026 3281 656195498 656195730 1.360000e-34 158.0
21 TraesCS2A01G527100 chr7B 89.000 100 11 0 1281 1380 740313306 740313405 1.380000e-24 124.0
22 TraesCS2A01G527100 chr7B 76.016 246 35 6 3025 3269 747592876 747592654 5.000000e-19 106.0
23 TraesCS2A01G527100 chr4B 80.738 244 25 2 3026 3269 32265617 32265396 1.750000e-38 171.0
24 TraesCS2A01G527100 chr1B 78.906 256 31 6 3026 3281 570298570 570298802 6.330000e-33 152.0
25 TraesCS2A01G527100 chr1D 93.000 100 5 2 1838 1935 16467710 16467809 1.060000e-30 145.0
26 TraesCS2A01G527100 chr6B 76.016 246 35 6 3025 3269 650723678 650723456 5.000000e-19 106.0
27 TraesCS2A01G527100 chr6B 75.410 244 38 5 3026 3269 650721202 650721423 8.370000e-17 99.0
28 TraesCS2A01G527100 chr5D 83.607 61 8 2 3414 3474 488677617 488677675 5.110000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G527100 chr2A 746931794 746935454 3660 True 3033.500000 5457 100.000000 1 3661 2 chr2A.!!$R2 3660
1 TraesCS2A01G527100 chr2A 360443098 360444579 1481 True 312.500000 320 97.037500 3476 3661 2 chr2A.!!$R1 185
2 TraesCS2A01G527100 chr2D 616935783 616938302 2519 True 1011.333333 2342 86.164333 1 3025 3 chr2D.!!$R1 3024
3 TraesCS2A01G527100 chr2B 752402980 752405566 2586 True 598.600000 1048 88.897600 1 2981 5 chr2B.!!$R3 2980

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
954 1023 0.179006 GAACCTCCCATCCATCAGGC 60.179 60.0 0.0 0.0 33.74 4.85 F
2336 2489 0.109723 TGTCCTGCCCAACCAAGTAC 59.890 55.0 0.0 0.0 0.00 2.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2472 2630 0.163788 GTTCACGAAGCATCACGGTG 59.836 55.0 0.56 0.56 0.00 4.94 R
3224 3419 0.033109 AAGGCCAGGGAGGTAATTGC 60.033 55.0 5.01 0.00 40.61 3.56 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
215 236 1.893808 CCGCTTCACCACTGCAGTT 60.894 57.895 18.94 0.00 0.00 3.16
250 280 2.676471 GCCCAACGCATTCCACCT 60.676 61.111 0.00 0.00 37.47 4.00
256 286 2.203209 CGCATTCCACCTAGGCCC 60.203 66.667 9.30 0.00 37.29 5.80
275 305 2.569354 GGCCCAAACGCATTCCACA 61.569 57.895 0.00 0.00 0.00 4.17
276 306 1.591183 GCCCAAACGCATTCCACAT 59.409 52.632 0.00 0.00 0.00 3.21
283 313 2.253758 CGCATTCCACATAGGCCCG 61.254 63.158 0.00 0.00 37.29 6.13
286 316 2.078665 ATTCCACATAGGCCCGGCT 61.079 57.895 9.86 0.34 37.29 5.52
318 348 3.439857 TTTAGGGTGATGCTTCAAGCT 57.560 42.857 11.57 0.00 42.97 3.74
319 349 3.439857 TTAGGGTGATGCTTCAAGCTT 57.560 42.857 11.57 3.78 42.97 3.74
320 350 1.831580 AGGGTGATGCTTCAAGCTTC 58.168 50.000 16.61 16.61 42.97 3.86
321 351 0.813821 GGGTGATGCTTCAAGCTTCC 59.186 55.000 19.73 12.16 42.66 3.46
322 352 0.813821 GGTGATGCTTCAAGCTTCCC 59.186 55.000 19.73 16.30 42.66 3.97
323 353 1.615384 GGTGATGCTTCAAGCTTCCCT 60.615 52.381 19.73 0.00 42.66 4.20
324 354 1.742268 GTGATGCTTCAAGCTTCCCTC 59.258 52.381 19.73 8.89 42.66 4.30
325 355 1.352017 TGATGCTTCAAGCTTCCCTCA 59.648 47.619 19.73 8.44 42.66 3.86
326 356 2.224843 TGATGCTTCAAGCTTCCCTCAA 60.225 45.455 19.73 1.22 42.66 3.02
327 357 2.363306 TGCTTCAAGCTTCCCTCAAA 57.637 45.000 11.57 0.00 42.97 2.69
328 358 2.665165 TGCTTCAAGCTTCCCTCAAAA 58.335 42.857 11.57 0.00 42.97 2.44
329 359 3.030291 TGCTTCAAGCTTCCCTCAAAAA 58.970 40.909 11.57 0.00 42.97 1.94
814 866 5.512404 CCACTGAACCACAACCACTAGATTA 60.512 44.000 0.00 0.00 0.00 1.75
818 870 6.539173 TGAACCACAACCACTAGATTAATGT 58.461 36.000 0.00 0.00 0.00 2.71
829 881 7.145985 CCACTAGATTAATGTAGCTAAGCGAA 58.854 38.462 17.27 0.00 0.00 4.70
830 882 7.327275 CCACTAGATTAATGTAGCTAAGCGAAG 59.673 40.741 17.27 0.00 0.00 3.79
843 895 3.084579 CGAAGCATGGTCACGAGC 58.915 61.111 15.80 0.00 0.00 5.03
844 896 1.737735 CGAAGCATGGTCACGAGCA 60.738 57.895 15.80 0.79 43.48 4.26
894 963 4.717313 AAACCTCGCCGCCTTCCC 62.717 66.667 0.00 0.00 0.00 3.97
927 996 2.684881 CCTGCATATAAATCGCCATCCC 59.315 50.000 0.00 0.00 0.00 3.85
938 1007 1.153349 GCCATCCCGTCCTCTGAAC 60.153 63.158 0.00 0.00 0.00 3.18
949 1018 1.010046 TCCTCTGAACCTCCCATCCAT 59.990 52.381 0.00 0.00 0.00 3.41
954 1023 0.179006 GAACCTCCCATCCATCAGGC 60.179 60.000 0.00 0.00 33.74 4.85
956 1025 2.429058 CTCCCATCCATCAGGCCG 59.571 66.667 0.00 0.00 33.74 6.13
958 1027 4.962836 CCCATCCATCAGGCCGGC 62.963 72.222 21.18 21.18 33.74 6.13
960 1029 2.114625 CATCCATCAGGCCGGCAT 59.885 61.111 30.85 21.35 33.74 4.40
963 1032 1.998444 ATCCATCAGGCCGGCATCAA 61.998 55.000 30.85 12.50 33.74 2.57
964 1033 2.191513 CCATCAGGCCGGCATCAAG 61.192 63.158 30.85 14.55 0.00 3.02
965 1034 1.452651 CATCAGGCCGGCATCAAGT 60.453 57.895 30.85 5.54 0.00 3.16
966 1035 0.179048 CATCAGGCCGGCATCAAGTA 60.179 55.000 30.85 6.01 0.00 2.24
967 1036 0.179045 ATCAGGCCGGCATCAAGTAC 60.179 55.000 30.85 8.01 0.00 2.73
968 1037 1.078497 CAGGCCGGCATCAAGTACA 60.078 57.895 30.85 0.00 0.00 2.90
969 1038 1.091771 CAGGCCGGCATCAAGTACAG 61.092 60.000 30.85 1.86 0.00 2.74
972 1041 1.369091 GCCGGCATCAAGTACAGGTG 61.369 60.000 24.80 0.00 0.00 4.00
975 1044 2.482326 GCATCAAGTACAGGTGCCC 58.518 57.895 11.32 0.00 0.00 5.36
990 1059 3.443925 CCCTGAGCAGCGAGACGA 61.444 66.667 0.00 0.00 0.00 4.20
997 1070 0.319900 AGCAGCGAGACGAACATTGT 60.320 50.000 0.00 0.00 0.00 2.71
1124 1203 2.414161 GCCAGATCGCACAGGTAAAAAC 60.414 50.000 0.00 0.00 0.00 2.43
1131 1210 3.112580 CGCACAGGTAAAAACAACTTGG 58.887 45.455 0.00 0.00 0.00 3.61
1171 1265 0.593128 GCATTGGCGTCACTGAAACT 59.407 50.000 11.97 0.00 0.00 2.66
1172 1266 1.664016 GCATTGGCGTCACTGAAACTG 60.664 52.381 11.97 0.00 0.00 3.16
1181 1275 3.813166 CGTCACTGAAACTGTAAATGGGT 59.187 43.478 0.00 0.00 0.00 4.51
1190 1284 7.601856 TGAAACTGTAAATGGGTGATTGATTC 58.398 34.615 0.00 0.00 0.00 2.52
1400 1495 2.297033 ACGCCAGTACGTTTCTTTCCTA 59.703 45.455 0.00 0.00 45.75 2.94
1403 1498 4.060205 GCCAGTACGTTTCTTTCCTAACA 58.940 43.478 0.00 0.00 0.00 2.41
1404 1499 4.151867 GCCAGTACGTTTCTTTCCTAACAG 59.848 45.833 0.00 0.00 0.00 3.16
1405 1500 4.151867 CCAGTACGTTTCTTTCCTAACAGC 59.848 45.833 0.00 0.00 0.00 4.40
1438 1534 4.201724 GCAGCGTAGATAAACTCTGTTTGG 60.202 45.833 6.01 0.00 35.20 3.28
1441 1537 6.019479 CAGCGTAGATAAACTCTGTTTGGATC 60.019 42.308 6.01 2.83 35.28 3.36
1443 1539 6.019479 GCGTAGATAAACTCTGTTTGGATCTG 60.019 42.308 14.03 4.90 35.28 2.90
1444 1540 6.477033 CGTAGATAAACTCTGTTTGGATCTGG 59.523 42.308 14.03 6.59 35.28 3.86
1445 1541 6.380079 AGATAAACTCTGTTTGGATCTGGT 57.620 37.500 6.01 0.00 31.12 4.00
1446 1542 6.176183 AGATAAACTCTGTTTGGATCTGGTG 58.824 40.000 6.01 0.00 31.12 4.17
1448 1544 4.437682 AACTCTGTTTGGATCTGGTGAA 57.562 40.909 0.00 0.00 0.00 3.18
1450 1546 4.990526 ACTCTGTTTGGATCTGGTGAATT 58.009 39.130 0.00 0.00 0.00 2.17
1451 1547 4.763793 ACTCTGTTTGGATCTGGTGAATTG 59.236 41.667 0.00 0.00 0.00 2.32
1633 1734 1.689813 TCTTGTACCCAGCGTTTCTGA 59.310 47.619 0.00 0.00 45.72 3.27
1634 1735 2.103432 TCTTGTACCCAGCGTTTCTGAA 59.897 45.455 0.00 0.00 45.72 3.02
1635 1736 2.851263 TGTACCCAGCGTTTCTGAAT 57.149 45.000 0.00 0.00 45.72 2.57
1636 1737 2.422597 TGTACCCAGCGTTTCTGAATG 58.577 47.619 0.00 0.00 45.72 2.67
1637 1738 2.037902 TGTACCCAGCGTTTCTGAATGA 59.962 45.455 0.00 0.00 45.72 2.57
1638 1739 1.813513 ACCCAGCGTTTCTGAATGAG 58.186 50.000 0.00 0.00 45.72 2.90
1639 1740 1.072331 ACCCAGCGTTTCTGAATGAGT 59.928 47.619 0.00 0.00 45.72 3.41
1640 1741 2.301870 ACCCAGCGTTTCTGAATGAGTA 59.698 45.455 0.00 0.00 45.72 2.59
1651 1752 7.095649 CGTTTCTGAATGAGTAATCACTGTTCA 60.096 37.037 7.30 7.30 35.35 3.18
1755 1857 5.560724 TCACCAGGTATTTTCTTCCTTCTG 58.439 41.667 0.00 0.00 0.00 3.02
1757 1859 6.012508 TCACCAGGTATTTTCTTCCTTCTGAT 60.013 38.462 0.00 0.00 0.00 2.90
1778 1883 9.237187 TCTGATATCTAGTAATCCTGTGATCAC 57.763 37.037 19.27 19.27 0.00 3.06
1781 1886 5.521906 TCTAGTAATCCTGTGATCACTGC 57.478 43.478 25.55 12.17 30.39 4.40
1801 1916 2.930023 GCACAGACCAGTCTCTGACATG 60.930 54.545 7.19 0.00 40.28 3.21
1804 1919 3.837146 ACAGACCAGTCTCTGACATGATT 59.163 43.478 0.00 0.00 40.28 2.57
1805 1920 4.285517 ACAGACCAGTCTCTGACATGATTT 59.714 41.667 0.00 0.00 40.28 2.17
1932 2047 6.605594 TCCAACCTCCATCATGTAAATAAACC 59.394 38.462 0.00 0.00 0.00 3.27
1933 2048 6.379703 CCAACCTCCATCATGTAAATAAACCA 59.620 38.462 0.00 0.00 0.00 3.67
1934 2049 7.416664 CCAACCTCCATCATGTAAATAAACCAG 60.417 40.741 0.00 0.00 0.00 4.00
1935 2050 5.594317 ACCTCCATCATGTAAATAAACCAGC 59.406 40.000 0.00 0.00 0.00 4.85
1936 2051 5.829924 CCTCCATCATGTAAATAAACCAGCT 59.170 40.000 0.00 0.00 0.00 4.24
1937 2052 6.016777 CCTCCATCATGTAAATAAACCAGCTC 60.017 42.308 0.00 0.00 0.00 4.09
1938 2053 5.827797 TCCATCATGTAAATAAACCAGCTCC 59.172 40.000 0.00 0.00 0.00 4.70
1939 2054 5.010012 CCATCATGTAAATAAACCAGCTCCC 59.990 44.000 0.00 0.00 0.00 4.30
1940 2055 5.186256 TCATGTAAATAAACCAGCTCCCA 57.814 39.130 0.00 0.00 0.00 4.37
1941 2056 4.947388 TCATGTAAATAAACCAGCTCCCAC 59.053 41.667 0.00 0.00 0.00 4.61
1942 2057 4.650972 TGTAAATAAACCAGCTCCCACT 57.349 40.909 0.00 0.00 0.00 4.00
1943 2058 4.585879 TGTAAATAAACCAGCTCCCACTC 58.414 43.478 0.00 0.00 0.00 3.51
1944 2059 3.806949 AAATAAACCAGCTCCCACTCA 57.193 42.857 0.00 0.00 0.00 3.41
1945 2060 4.322057 AAATAAACCAGCTCCCACTCAT 57.678 40.909 0.00 0.00 0.00 2.90
1946 2061 2.787473 TAAACCAGCTCCCACTCATG 57.213 50.000 0.00 0.00 0.00 3.07
1947 2062 1.067295 AAACCAGCTCCCACTCATGA 58.933 50.000 0.00 0.00 0.00 3.07
1953 2068 2.702478 CAGCTCCCACTCATGATCCTTA 59.298 50.000 0.00 0.00 0.00 2.69
1977 2092 4.213270 CCTGTAACACACTACACACAATGG 59.787 45.833 0.00 0.00 0.00 3.16
1988 2103 2.429971 ACACACAATGGCATGTCACAAA 59.570 40.909 0.00 0.00 0.00 2.83
1989 2104 3.118847 ACACACAATGGCATGTCACAAAA 60.119 39.130 0.00 0.00 0.00 2.44
1991 2106 3.870419 ACACAATGGCATGTCACAAAAAC 59.130 39.130 0.00 0.00 0.00 2.43
2148 2263 2.884012 CAGCACAACATCACCAAGGTAA 59.116 45.455 0.00 0.00 0.00 2.85
2150 2265 2.351738 GCACAACATCACCAAGGTAAGC 60.352 50.000 0.00 0.00 0.00 3.09
2153 2268 3.181445 ACAACATCACCAAGGTAAGCTGA 60.181 43.478 0.00 0.00 0.00 4.26
2157 2272 5.079643 ACATCACCAAGGTAAGCTGAAAAT 58.920 37.500 0.00 0.00 0.00 1.82
2162 2277 6.097554 TCACCAAGGTAAGCTGAAAATCAAAA 59.902 34.615 0.00 0.00 0.00 2.44
2163 2278 6.930722 CACCAAGGTAAGCTGAAAATCAAAAT 59.069 34.615 0.00 0.00 0.00 1.82
2164 2279 7.116805 CACCAAGGTAAGCTGAAAATCAAAATC 59.883 37.037 0.00 0.00 0.00 2.17
2166 2281 7.656948 CCAAGGTAAGCTGAAAATCAAAATCAA 59.343 33.333 0.00 0.00 0.00 2.57
2167 2282 8.490355 CAAGGTAAGCTGAAAATCAAAATCAAC 58.510 33.333 0.00 0.00 0.00 3.18
2168 2283 7.154656 AGGTAAGCTGAAAATCAAAATCAACC 58.845 34.615 0.00 0.00 0.00 3.77
2169 2284 6.089417 GGTAAGCTGAAAATCAAAATCAACCG 59.911 38.462 0.00 0.00 0.00 4.44
2170 2285 4.559153 AGCTGAAAATCAAAATCAACCGG 58.441 39.130 0.00 0.00 0.00 5.28
2176 2294 2.270352 TCAAAATCAACCGGCAGTCT 57.730 45.000 0.00 0.00 0.00 3.24
2179 2297 2.270352 AAATCAACCGGCAGTCTCAA 57.730 45.000 0.00 0.00 0.00 3.02
2181 2299 2.029838 ATCAACCGGCAGTCTCAATC 57.970 50.000 0.00 0.00 0.00 2.67
2185 2303 0.396435 ACCGGCAGTCTCAATCACAA 59.604 50.000 0.00 0.00 0.00 3.33
2187 2305 2.086869 CCGGCAGTCTCAATCACAAAT 58.913 47.619 0.00 0.00 0.00 2.32
2200 2351 2.507484 TCACAAATGTGCTCTCCAAGG 58.493 47.619 8.67 0.00 45.25 3.61
2219 2370 1.541588 GGCCAGGAACATGTCTGAAAC 59.458 52.381 14.48 5.31 33.11 2.78
2238 2389 9.854668 TCTGAAACTTACAGACTAGCTAGATAT 57.145 33.333 27.45 4.76 39.10 1.63
2336 2489 0.109723 TGTCCTGCCCAACCAAGTAC 59.890 55.000 0.00 0.00 0.00 2.73
2448 2606 2.677902 CGCCTAGCTTCCTGTTCATCAA 60.678 50.000 0.00 0.00 0.00 2.57
2466 2624 1.139256 CAAGCCATTGCCATGCCATTA 59.861 47.619 0.00 0.00 38.69 1.90
2472 2630 2.057137 TTGCCATGCCATTAGTCCTC 57.943 50.000 0.00 0.00 0.00 3.71
2475 2633 1.972872 CCATGCCATTAGTCCTCACC 58.027 55.000 0.00 0.00 0.00 4.02
2490 2648 0.032815 TCACCGTGATGCTTCGTGAA 59.967 50.000 0.00 0.00 0.00 3.18
2585 2743 1.971695 GTTCCTCAACCGGGCCTTG 60.972 63.158 6.32 0.79 0.00 3.61
2638 2796 3.723348 GCCGGTGAACTTGGTCGC 61.723 66.667 1.90 0.00 0.00 5.19
2711 2874 1.351076 TCCATGCTGACCTGAAGACA 58.649 50.000 0.00 0.00 0.00 3.41
2716 2879 0.615331 GCTGACCTGAAGACATGGGA 59.385 55.000 0.00 0.00 0.00 4.37
2717 2880 1.677217 GCTGACCTGAAGACATGGGAC 60.677 57.143 0.00 0.00 0.00 4.46
2739 2913 4.576873 ACACGATGATACTGTAGGAGACTG 59.423 45.833 0.00 0.00 43.88 3.51
2766 2940 6.152492 TGCTAACTTGCATGGAAATGATACAA 59.848 34.615 0.00 0.00 38.12 2.41
2771 2945 7.037438 ACTTGCATGGAAATGATACAAATGAC 58.963 34.615 0.00 0.00 0.00 3.06
2774 2952 5.750067 GCATGGAAATGATACAAATGACCAC 59.250 40.000 0.00 0.00 0.00 4.16
2792 2970 5.046910 ACCACTGAATAATTGTTTGCGAG 57.953 39.130 0.00 0.00 0.00 5.03
2796 2974 1.508725 GAATAATTGTTTGCGAGCGCG 59.491 47.619 5.14 5.14 45.51 6.86
2812 2990 2.959275 GCGAACAGCTAGCGTGTAT 58.041 52.632 16.73 9.56 44.04 2.29
2813 2991 0.572590 GCGAACAGCTAGCGTGTATG 59.427 55.000 16.73 9.28 44.04 2.39
2920 3108 3.569701 AGTTGCCTGAATGAATCAACGTT 59.430 39.130 0.00 0.00 41.15 3.99
2921 3109 3.557577 TGCCTGAATGAATCAACGTTG 57.442 42.857 22.35 22.35 37.67 4.10
2944 3132 0.387622 CATTTGTCACGGCAAGGCAG 60.388 55.000 0.00 0.00 0.00 4.85
2963 3151 0.603569 GGATCGTGTCCACACTCTGT 59.396 55.000 8.19 0.00 46.96 3.41
2987 3175 3.125146 CACATCAGTACCATTTGTCGTGG 59.875 47.826 0.00 0.00 42.55 4.94
2994 3182 1.167851 CCATTTGTCGTGGCATGACT 58.832 50.000 32.96 16.08 35.24 3.41
2995 3183 1.131126 CCATTTGTCGTGGCATGACTC 59.869 52.381 32.96 14.52 35.24 3.36
2996 3184 1.131126 CATTTGTCGTGGCATGACTCC 59.869 52.381 32.96 13.86 35.24 3.85
3002 3190 1.642037 CGTGGCATGACTCCTTGCAG 61.642 60.000 0.00 0.00 43.04 4.41
3003 3191 0.607489 GTGGCATGACTCCTTGCAGT 60.607 55.000 0.00 0.00 43.04 4.40
3040 3235 9.669353 CATTTAAATGTGAGGTAATAGCATCAC 57.331 33.333 18.32 12.03 41.89 3.06
3041 3236 5.991328 AAATGTGAGGTAATAGCATCACG 57.009 39.130 13.22 0.00 43.94 4.35
3042 3237 4.937201 ATGTGAGGTAATAGCATCACGA 57.063 40.909 13.22 6.90 43.94 4.35
3043 3238 4.307443 TGTGAGGTAATAGCATCACGAG 57.693 45.455 13.22 0.00 43.94 4.18
3044 3239 3.699538 TGTGAGGTAATAGCATCACGAGT 59.300 43.478 13.22 0.00 43.94 4.18
3045 3240 4.202020 TGTGAGGTAATAGCATCACGAGTC 60.202 45.833 13.22 0.00 43.94 3.36
3046 3241 3.318275 TGAGGTAATAGCATCACGAGTCC 59.682 47.826 0.00 0.00 0.00 3.85
3047 3242 3.567397 AGGTAATAGCATCACGAGTCCT 58.433 45.455 0.00 0.00 0.00 3.85
3048 3243 3.319405 AGGTAATAGCATCACGAGTCCTG 59.681 47.826 0.00 0.00 0.00 3.86
3049 3244 3.318275 GGTAATAGCATCACGAGTCCTGA 59.682 47.826 0.00 0.00 0.00 3.86
3050 3245 4.202121 GGTAATAGCATCACGAGTCCTGAA 60.202 45.833 0.00 0.00 0.00 3.02
3051 3246 4.471904 AATAGCATCACGAGTCCTGAAA 57.528 40.909 0.00 0.00 0.00 2.69
3052 3247 2.086054 AGCATCACGAGTCCTGAAAC 57.914 50.000 0.00 0.00 0.00 2.78
3053 3248 1.620819 AGCATCACGAGTCCTGAAACT 59.379 47.619 0.00 0.00 0.00 2.66
3054 3249 2.037772 AGCATCACGAGTCCTGAAACTT 59.962 45.455 0.00 0.00 0.00 2.66
3055 3250 2.158449 GCATCACGAGTCCTGAAACTTG 59.842 50.000 0.00 0.00 36.81 3.16
3056 3251 3.393800 CATCACGAGTCCTGAAACTTGT 58.606 45.455 0.00 0.00 43.30 3.16
3057 3252 3.093717 TCACGAGTCCTGAAACTTGTC 57.906 47.619 0.00 0.00 41.08 3.18
3058 3253 2.693591 TCACGAGTCCTGAAACTTGTCT 59.306 45.455 0.00 0.00 41.08 3.41
3059 3254 3.132289 TCACGAGTCCTGAAACTTGTCTT 59.868 43.478 0.00 0.00 41.08 3.01
3060 3255 3.246226 CACGAGTCCTGAAACTTGTCTTG 59.754 47.826 0.00 0.00 41.08 3.02
3061 3256 3.132289 ACGAGTCCTGAAACTTGTCTTGA 59.868 43.478 0.00 0.00 39.23 3.02
3062 3257 4.119862 CGAGTCCTGAAACTTGTCTTGAA 58.880 43.478 0.00 0.00 0.00 2.69
3063 3258 4.752101 CGAGTCCTGAAACTTGTCTTGAAT 59.248 41.667 0.00 0.00 0.00 2.57
3064 3259 5.333645 CGAGTCCTGAAACTTGTCTTGAATG 60.334 44.000 0.00 0.00 0.00 2.67
3065 3260 5.440610 AGTCCTGAAACTTGTCTTGAATGT 58.559 37.500 0.00 0.00 0.00 2.71
3066 3261 5.297776 AGTCCTGAAACTTGTCTTGAATGTG 59.702 40.000 0.00 0.00 0.00 3.21
3067 3262 5.296780 GTCCTGAAACTTGTCTTGAATGTGA 59.703 40.000 0.00 0.00 0.00 3.58
3068 3263 6.016777 GTCCTGAAACTTGTCTTGAATGTGAT 60.017 38.462 0.00 0.00 0.00 3.06
3069 3264 7.173218 GTCCTGAAACTTGTCTTGAATGTGATA 59.827 37.037 0.00 0.00 0.00 2.15
3070 3265 7.719193 TCCTGAAACTTGTCTTGAATGTGATAA 59.281 33.333 0.00 0.00 0.00 1.75
3071 3266 8.517878 CCTGAAACTTGTCTTGAATGTGATAAT 58.482 33.333 0.00 0.00 0.00 1.28
3072 3267 9.552114 CTGAAACTTGTCTTGAATGTGATAATC 57.448 33.333 0.00 0.00 0.00 1.75
3073 3268 9.288576 TGAAACTTGTCTTGAATGTGATAATCT 57.711 29.630 0.00 0.00 0.00 2.40
3076 3271 9.950496 AACTTGTCTTGAATGTGATAATCTAGT 57.050 29.630 0.00 0.00 0.00 2.57
3077 3272 9.950496 ACTTGTCTTGAATGTGATAATCTAGTT 57.050 29.630 0.00 0.00 0.00 2.24
3079 3274 9.942850 TTGTCTTGAATGTGATAATCTAGTTCA 57.057 29.630 0.00 0.00 0.00 3.18
3080 3275 9.942850 TGTCTTGAATGTGATAATCTAGTTCAA 57.057 29.630 0.00 0.00 34.24 2.69
3114 3309 9.816354 AAAAACAAACTATTGCATCTTACAACT 57.184 25.926 0.00 0.00 40.34 3.16
3115 3310 9.816354 AAAACAAACTATTGCATCTTACAACTT 57.184 25.926 0.00 0.00 40.34 2.66
3116 3311 8.801715 AACAAACTATTGCATCTTACAACTTG 57.198 30.769 0.00 0.00 40.34 3.16
3117 3312 6.863126 ACAAACTATTGCATCTTACAACTTGC 59.137 34.615 0.00 0.00 40.34 4.01
3118 3313 6.573664 AACTATTGCATCTTACAACTTGCA 57.426 33.333 0.00 0.00 42.90 4.08
3119 3314 6.764308 ACTATTGCATCTTACAACTTGCAT 57.236 33.333 0.00 0.00 43.91 3.96
3120 3315 6.789262 ACTATTGCATCTTACAACTTGCATC 58.211 36.000 0.00 0.00 43.91 3.91
3121 3316 4.439305 TTGCATCTTACAACTTGCATCC 57.561 40.909 0.00 0.00 43.91 3.51
3122 3317 3.419943 TGCATCTTACAACTTGCATCCA 58.580 40.909 0.00 0.00 39.98 3.41
3123 3318 3.825585 TGCATCTTACAACTTGCATCCAA 59.174 39.130 0.00 0.00 39.98 3.53
3124 3319 4.463539 TGCATCTTACAACTTGCATCCAAT 59.536 37.500 0.00 0.00 39.98 3.16
3125 3320 4.802039 GCATCTTACAACTTGCATCCAATG 59.198 41.667 0.00 0.00 35.22 2.82
3126 3321 5.622914 GCATCTTACAACTTGCATCCAATGT 60.623 40.000 0.00 0.00 35.22 2.71
3127 3322 5.375417 TCTTACAACTTGCATCCAATGTG 57.625 39.130 0.00 0.00 29.62 3.21
3128 3323 4.826733 TCTTACAACTTGCATCCAATGTGT 59.173 37.500 0.00 0.00 34.30 3.72
3129 3324 6.000840 TCTTACAACTTGCATCCAATGTGTA 58.999 36.000 0.00 0.00 32.94 2.90
3130 3325 6.488344 TCTTACAACTTGCATCCAATGTGTAA 59.512 34.615 0.00 5.41 37.54 2.41
3131 3326 5.528043 ACAACTTGCATCCAATGTGTAAA 57.472 34.783 0.00 0.00 30.48 2.01
3132 3327 6.100404 ACAACTTGCATCCAATGTGTAAAT 57.900 33.333 0.00 0.00 30.48 1.40
3133 3328 6.523840 ACAACTTGCATCCAATGTGTAAATT 58.476 32.000 0.00 0.00 30.48 1.82
3134 3329 6.991531 ACAACTTGCATCCAATGTGTAAATTT 59.008 30.769 0.00 0.00 30.48 1.82
3135 3330 7.041916 ACAACTTGCATCCAATGTGTAAATTTG 60.042 33.333 0.00 0.00 30.48 2.32
3136 3331 6.757237 ACTTGCATCCAATGTGTAAATTTGA 58.243 32.000 0.00 0.00 0.00 2.69
3137 3332 7.388437 ACTTGCATCCAATGTGTAAATTTGAT 58.612 30.769 0.00 0.00 0.00 2.57
3138 3333 7.546667 ACTTGCATCCAATGTGTAAATTTGATC 59.453 33.333 0.00 0.00 0.00 2.92
3139 3334 6.339730 TGCATCCAATGTGTAAATTTGATCC 58.660 36.000 0.00 0.00 0.00 3.36
3140 3335 6.154877 TGCATCCAATGTGTAAATTTGATCCT 59.845 34.615 0.00 0.00 0.00 3.24
3141 3336 7.341512 TGCATCCAATGTGTAAATTTGATCCTA 59.658 33.333 0.00 0.00 0.00 2.94
3142 3337 7.864379 GCATCCAATGTGTAAATTTGATCCTAG 59.136 37.037 0.00 0.00 0.00 3.02
3143 3338 7.333528 TCCAATGTGTAAATTTGATCCTAGC 57.666 36.000 0.00 0.00 0.00 3.42
3144 3339 6.321181 TCCAATGTGTAAATTTGATCCTAGCC 59.679 38.462 0.00 0.00 0.00 3.93
3145 3340 6.096705 CCAATGTGTAAATTTGATCCTAGCCA 59.903 38.462 0.00 0.00 0.00 4.75
3146 3341 7.363705 CCAATGTGTAAATTTGATCCTAGCCAA 60.364 37.037 0.00 0.00 0.00 4.52
3147 3342 7.902920 ATGTGTAAATTTGATCCTAGCCAAT 57.097 32.000 0.00 0.00 0.00 3.16
3148 3343 7.333528 TGTGTAAATTTGATCCTAGCCAATC 57.666 36.000 0.00 0.00 0.00 2.67
3149 3344 6.889177 TGTGTAAATTTGATCCTAGCCAATCA 59.111 34.615 0.00 0.00 0.00 2.57
3150 3345 7.067372 TGTGTAAATTTGATCCTAGCCAATCAG 59.933 37.037 0.00 0.00 33.66 2.90
3151 3346 7.283127 GTGTAAATTTGATCCTAGCCAATCAGA 59.717 37.037 0.00 0.00 33.66 3.27
3152 3347 6.705863 AAATTTGATCCTAGCCAATCAGAC 57.294 37.500 0.00 0.00 33.66 3.51
3153 3348 4.842531 TTTGATCCTAGCCAATCAGACA 57.157 40.909 0.00 0.00 33.66 3.41
3154 3349 4.842531 TTGATCCTAGCCAATCAGACAA 57.157 40.909 0.00 0.00 33.66 3.18
3155 3350 4.142609 TGATCCTAGCCAATCAGACAAC 57.857 45.455 0.00 0.00 0.00 3.32
3156 3351 3.519107 TGATCCTAGCCAATCAGACAACA 59.481 43.478 0.00 0.00 0.00 3.33
3157 3352 4.019411 TGATCCTAGCCAATCAGACAACAA 60.019 41.667 0.00 0.00 0.00 2.83
3158 3353 3.674997 TCCTAGCCAATCAGACAACAAC 58.325 45.455 0.00 0.00 0.00 3.32
3159 3354 2.416547 CCTAGCCAATCAGACAACAACG 59.583 50.000 0.00 0.00 0.00 4.10
3160 3355 2.254546 AGCCAATCAGACAACAACGA 57.745 45.000 0.00 0.00 0.00 3.85
3161 3356 1.873591 AGCCAATCAGACAACAACGAC 59.126 47.619 0.00 0.00 0.00 4.34
3162 3357 1.601903 GCCAATCAGACAACAACGACA 59.398 47.619 0.00 0.00 0.00 4.35
3163 3358 2.032799 GCCAATCAGACAACAACGACAA 59.967 45.455 0.00 0.00 0.00 3.18
3164 3359 3.617669 CCAATCAGACAACAACGACAAC 58.382 45.455 0.00 0.00 0.00 3.32
3165 3360 3.312421 CCAATCAGACAACAACGACAACT 59.688 43.478 0.00 0.00 0.00 3.16
3166 3361 4.274069 CAATCAGACAACAACGACAACTG 58.726 43.478 0.00 0.00 0.00 3.16
3167 3362 2.276201 TCAGACAACAACGACAACTGG 58.724 47.619 0.00 0.00 0.00 4.00
3168 3363 2.093921 TCAGACAACAACGACAACTGGA 60.094 45.455 0.00 0.00 0.00 3.86
3169 3364 2.285220 CAGACAACAACGACAACTGGAG 59.715 50.000 0.00 0.00 0.00 3.86
3170 3365 1.003866 GACAACAACGACAACTGGAGC 60.004 52.381 0.00 0.00 0.00 4.70
3171 3366 0.307760 CAACAACGACAACTGGAGCC 59.692 55.000 0.00 0.00 0.00 4.70
3172 3367 0.107410 AACAACGACAACTGGAGCCA 60.107 50.000 0.00 0.00 0.00 4.75
3173 3368 0.107410 ACAACGACAACTGGAGCCAA 60.107 50.000 0.00 0.00 0.00 4.52
3174 3369 0.588252 CAACGACAACTGGAGCCAAG 59.412 55.000 0.00 0.00 0.00 3.61
3175 3370 0.180406 AACGACAACTGGAGCCAAGT 59.820 50.000 0.00 0.00 0.00 3.16
3176 3371 0.249911 ACGACAACTGGAGCCAAGTC 60.250 55.000 0.00 0.00 0.00 3.01
3177 3372 0.249868 CGACAACTGGAGCCAAGTCA 60.250 55.000 13.37 0.00 0.00 3.41
3178 3373 1.517242 GACAACTGGAGCCAAGTCAG 58.483 55.000 9.97 0.00 34.91 3.51
3179 3374 0.536006 ACAACTGGAGCCAAGTCAGC 60.536 55.000 0.00 0.00 32.19 4.26
3180 3375 0.535780 CAACTGGAGCCAAGTCAGCA 60.536 55.000 0.00 0.00 32.19 4.41
3181 3376 0.536006 AACTGGAGCCAAGTCAGCAC 60.536 55.000 0.00 0.00 32.19 4.40
3182 3377 1.071987 CTGGAGCCAAGTCAGCACA 59.928 57.895 0.00 0.00 0.00 4.57
3183 3378 0.954449 CTGGAGCCAAGTCAGCACAG 60.954 60.000 0.00 0.00 33.32 3.66
3184 3379 2.331132 GGAGCCAAGTCAGCACAGC 61.331 63.158 0.00 0.00 0.00 4.40
3185 3380 2.282040 AGCCAAGTCAGCACAGCC 60.282 61.111 0.00 0.00 0.00 4.85
3186 3381 3.368571 GCCAAGTCAGCACAGCCC 61.369 66.667 0.00 0.00 0.00 5.19
3187 3382 2.113774 CCAAGTCAGCACAGCCCA 59.886 61.111 0.00 0.00 0.00 5.36
3188 3383 1.303888 CCAAGTCAGCACAGCCCAT 60.304 57.895 0.00 0.00 0.00 4.00
3189 3384 0.896940 CCAAGTCAGCACAGCCCATT 60.897 55.000 0.00 0.00 0.00 3.16
3190 3385 0.242825 CAAGTCAGCACAGCCCATTG 59.757 55.000 0.00 0.00 0.00 2.82
3191 3386 1.530013 AAGTCAGCACAGCCCATTGC 61.530 55.000 0.00 0.00 39.16 3.56
3192 3387 2.677524 TCAGCACAGCCCATTGCC 60.678 61.111 0.00 0.00 42.71 4.52
3193 3388 3.766691 CAGCACAGCCCATTGCCC 61.767 66.667 0.00 0.00 42.71 5.36
3196 3391 4.700448 CACAGCCCATTGCCCCCA 62.700 66.667 0.00 0.00 42.71 4.96
3197 3392 4.702274 ACAGCCCATTGCCCCCAC 62.702 66.667 0.00 0.00 42.71 4.61
3198 3393 4.387343 CAGCCCATTGCCCCCACT 62.387 66.667 0.00 0.00 42.71 4.00
3199 3394 4.066139 AGCCCATTGCCCCCACTC 62.066 66.667 0.00 0.00 42.71 3.51
3201 3396 3.671410 CCCATTGCCCCCACTCCA 61.671 66.667 0.00 0.00 0.00 3.86
3202 3397 2.691732 CCATTGCCCCCACTCCAT 59.308 61.111 0.00 0.00 0.00 3.41
3203 3398 1.456331 CCATTGCCCCCACTCCATC 60.456 63.158 0.00 0.00 0.00 3.51
3204 3399 1.456331 CATTGCCCCCACTCCATCC 60.456 63.158 0.00 0.00 0.00 3.51
3205 3400 3.060614 ATTGCCCCCACTCCATCCG 62.061 63.158 0.00 0.00 0.00 4.18
3208 3403 3.480133 CCCCCACTCCATCCGGTC 61.480 72.222 0.00 0.00 0.00 4.79
3209 3404 2.687200 CCCCACTCCATCCGGTCA 60.687 66.667 0.00 0.00 0.00 4.02
3210 3405 2.735772 CCCCACTCCATCCGGTCAG 61.736 68.421 0.00 0.00 0.00 3.51
3211 3406 2.187946 CCACTCCATCCGGTCAGC 59.812 66.667 0.00 0.00 0.00 4.26
3212 3407 2.202797 CACTCCATCCGGTCAGCG 60.203 66.667 0.00 0.00 0.00 5.18
3213 3408 4.148825 ACTCCATCCGGTCAGCGC 62.149 66.667 0.00 0.00 0.00 5.92
3214 3409 4.899239 CTCCATCCGGTCAGCGCC 62.899 72.222 2.29 0.00 0.00 6.53
3222 3417 3.660111 GGTCAGCGCCGCACTTTT 61.660 61.111 13.36 0.00 0.00 2.27
3223 3418 2.331451 GTCAGCGCCGCACTTTTT 59.669 55.556 13.36 0.00 0.00 1.94
3224 3419 2.010817 GTCAGCGCCGCACTTTTTG 61.011 57.895 13.36 0.00 0.00 2.44
3237 3432 4.871933 CACTTTTTGCAATTACCTCCCT 57.128 40.909 0.00 0.00 0.00 4.20
3238 3433 4.559153 CACTTTTTGCAATTACCTCCCTG 58.441 43.478 0.00 0.00 0.00 4.45
3239 3434 3.578282 ACTTTTTGCAATTACCTCCCTGG 59.422 43.478 0.00 0.00 42.93 4.45
3240 3435 1.555967 TTTGCAATTACCTCCCTGGC 58.444 50.000 0.00 0.00 40.22 4.85
3241 3436 0.324275 TTGCAATTACCTCCCTGGCC 60.324 55.000 0.00 0.00 40.22 5.36
3242 3437 1.214305 TGCAATTACCTCCCTGGCCT 61.214 55.000 3.32 0.00 40.22 5.19
3243 3438 0.033109 GCAATTACCTCCCTGGCCTT 60.033 55.000 3.32 0.00 40.22 4.35
3244 3439 1.214424 GCAATTACCTCCCTGGCCTTA 59.786 52.381 3.32 0.00 40.22 2.69
3245 3440 2.749800 GCAATTACCTCCCTGGCCTTAG 60.750 54.545 3.32 0.00 40.22 2.18
3246 3441 1.141185 ATTACCTCCCTGGCCTTAGC 58.859 55.000 3.32 0.00 40.22 3.09
3247 3442 0.252974 TTACCTCCCTGGCCTTAGCA 60.253 55.000 3.32 0.00 42.56 3.49
3248 3443 0.981277 TACCTCCCTGGCCTTAGCAC 60.981 60.000 3.32 0.00 42.56 4.40
3249 3444 2.300967 CCTCCCTGGCCTTAGCACA 61.301 63.158 3.32 0.00 42.56 4.57
3250 3445 1.685224 CTCCCTGGCCTTAGCACAA 59.315 57.895 3.32 0.00 42.56 3.33
3251 3446 0.038166 CTCCCTGGCCTTAGCACAAA 59.962 55.000 3.32 0.00 42.56 2.83
3252 3447 0.704076 TCCCTGGCCTTAGCACAAAT 59.296 50.000 3.32 0.00 42.56 2.32
3253 3448 1.919654 TCCCTGGCCTTAGCACAAATA 59.080 47.619 3.32 0.00 42.56 1.40
3254 3449 2.310349 TCCCTGGCCTTAGCACAAATAA 59.690 45.455 3.32 0.00 42.56 1.40
3255 3450 3.096092 CCCTGGCCTTAGCACAAATAAA 58.904 45.455 3.32 0.00 42.56 1.40
3256 3451 3.119137 CCCTGGCCTTAGCACAAATAAAC 60.119 47.826 3.32 0.00 42.56 2.01
3257 3452 3.119137 CCTGGCCTTAGCACAAATAAACC 60.119 47.826 3.32 0.00 42.56 3.27
3258 3453 2.829120 TGGCCTTAGCACAAATAAACCC 59.171 45.455 3.32 0.00 42.56 4.11
3259 3454 2.159296 GGCCTTAGCACAAATAAACCCG 60.159 50.000 0.00 0.00 42.56 5.28
3260 3455 2.734175 GCCTTAGCACAAATAAACCCGC 60.734 50.000 0.00 0.00 39.53 6.13
3261 3456 2.490115 CCTTAGCACAAATAAACCCGCA 59.510 45.455 0.00 0.00 0.00 5.69
3262 3457 3.130340 CCTTAGCACAAATAAACCCGCAT 59.870 43.478 0.00 0.00 0.00 4.73
3263 3458 4.381505 CCTTAGCACAAATAAACCCGCATT 60.382 41.667 0.00 0.00 0.00 3.56
3264 3459 5.163602 CCTTAGCACAAATAAACCCGCATTA 60.164 40.000 0.00 0.00 0.00 1.90
3265 3460 4.104696 AGCACAAATAAACCCGCATTAC 57.895 40.909 0.00 0.00 0.00 1.89
3266 3461 3.508012 AGCACAAATAAACCCGCATTACA 59.492 39.130 0.00 0.00 0.00 2.41
3267 3462 3.610677 GCACAAATAAACCCGCATTACAC 59.389 43.478 0.00 0.00 0.00 2.90
3268 3463 4.170256 CACAAATAAACCCGCATTACACC 58.830 43.478 0.00 0.00 0.00 4.16
3269 3464 3.827302 ACAAATAAACCCGCATTACACCA 59.173 39.130 0.00 0.00 0.00 4.17
3270 3465 4.170256 CAAATAAACCCGCATTACACCAC 58.830 43.478 0.00 0.00 0.00 4.16
3271 3466 1.823797 TAAACCCGCATTACACCACC 58.176 50.000 0.00 0.00 0.00 4.61
3272 3467 0.111639 AAACCCGCATTACACCACCT 59.888 50.000 0.00 0.00 0.00 4.00
3273 3468 0.608035 AACCCGCATTACACCACCTG 60.608 55.000 0.00 0.00 0.00 4.00
3274 3469 1.298340 CCCGCATTACACCACCTGA 59.702 57.895 0.00 0.00 0.00 3.86
3275 3470 0.744414 CCCGCATTACACCACCTGAG 60.744 60.000 0.00 0.00 0.00 3.35
3276 3471 0.744414 CCGCATTACACCACCTGAGG 60.744 60.000 0.00 0.00 0.00 3.86
3277 3472 0.036388 CGCATTACACCACCTGAGGT 60.036 55.000 0.00 0.00 44.48 3.85
3278 3473 1.610624 CGCATTACACCACCTGAGGTT 60.611 52.381 0.00 0.00 40.77 3.50
3279 3474 2.514803 GCATTACACCACCTGAGGTTT 58.485 47.619 0.00 0.00 40.77 3.27
3280 3475 3.681593 GCATTACACCACCTGAGGTTTA 58.318 45.455 0.00 0.00 40.77 2.01
3281 3476 3.689649 GCATTACACCACCTGAGGTTTAG 59.310 47.826 0.00 0.00 40.77 1.85
3282 3477 4.261801 CATTACACCACCTGAGGTTTAGG 58.738 47.826 0.00 2.58 40.77 2.69
3283 3478 2.112279 ACACCACCTGAGGTTTAGGA 57.888 50.000 12.94 0.00 40.77 2.94
3284 3479 2.632537 ACACCACCTGAGGTTTAGGAT 58.367 47.619 12.94 0.00 40.77 3.24
3285 3480 2.305927 ACACCACCTGAGGTTTAGGATG 59.694 50.000 12.94 9.56 40.77 3.51
3286 3481 1.916181 ACCACCTGAGGTTTAGGATGG 59.084 52.381 12.94 6.97 39.34 3.51
3287 3482 2.196595 CCACCTGAGGTTTAGGATGGA 58.803 52.381 0.00 0.00 38.06 3.41
3288 3483 2.171448 CCACCTGAGGTTTAGGATGGAG 59.829 54.545 0.00 0.00 38.06 3.86
3289 3484 2.840651 CACCTGAGGTTTAGGATGGAGT 59.159 50.000 0.00 0.00 38.71 3.85
3290 3485 2.840651 ACCTGAGGTTTAGGATGGAGTG 59.159 50.000 0.00 0.00 38.71 3.51
3291 3486 3.107601 CCTGAGGTTTAGGATGGAGTGA 58.892 50.000 0.00 0.00 37.52 3.41
3292 3487 3.133721 CCTGAGGTTTAGGATGGAGTGAG 59.866 52.174 0.00 0.00 37.52 3.51
3293 3488 3.772025 CTGAGGTTTAGGATGGAGTGAGT 59.228 47.826 0.00 0.00 0.00 3.41
3294 3489 4.168101 TGAGGTTTAGGATGGAGTGAGTT 58.832 43.478 0.00 0.00 0.00 3.01
3295 3490 4.597507 TGAGGTTTAGGATGGAGTGAGTTT 59.402 41.667 0.00 0.00 0.00 2.66
3296 3491 5.073144 TGAGGTTTAGGATGGAGTGAGTTTT 59.927 40.000 0.00 0.00 0.00 2.43
3297 3492 6.271391 TGAGGTTTAGGATGGAGTGAGTTTTA 59.729 38.462 0.00 0.00 0.00 1.52
3298 3493 6.712276 AGGTTTAGGATGGAGTGAGTTTTAG 58.288 40.000 0.00 0.00 0.00 1.85
3299 3494 6.500751 AGGTTTAGGATGGAGTGAGTTTTAGA 59.499 38.462 0.00 0.00 0.00 2.10
3300 3495 6.594547 GGTTTAGGATGGAGTGAGTTTTAGAC 59.405 42.308 0.00 0.00 0.00 2.59
3301 3496 4.457834 AGGATGGAGTGAGTTTTAGACG 57.542 45.455 0.00 0.00 0.00 4.18
3302 3497 2.930682 GGATGGAGTGAGTTTTAGACGC 59.069 50.000 0.00 0.00 0.00 5.19
3303 3498 2.060326 TGGAGTGAGTTTTAGACGCG 57.940 50.000 3.53 3.53 0.00 6.01
3304 3499 1.610038 TGGAGTGAGTTTTAGACGCGA 59.390 47.619 15.93 0.00 0.00 5.87
3305 3500 1.984297 GGAGTGAGTTTTAGACGCGAC 59.016 52.381 15.93 6.86 0.00 5.19
3306 3501 1.984297 GAGTGAGTTTTAGACGCGACC 59.016 52.381 15.93 3.72 0.00 4.79
3307 3502 1.338973 AGTGAGTTTTAGACGCGACCA 59.661 47.619 15.93 0.00 0.00 4.02
3308 3503 1.719780 GTGAGTTTTAGACGCGACCAG 59.280 52.381 15.93 0.00 0.00 4.00
3309 3504 1.338973 TGAGTTTTAGACGCGACCAGT 59.661 47.619 15.93 0.00 0.00 4.00
3310 3505 1.719780 GAGTTTTAGACGCGACCAGTG 59.280 52.381 15.93 0.00 0.00 3.66
3311 3506 0.163146 GTTTTAGACGCGACCAGTGC 59.837 55.000 15.93 0.00 0.00 4.40
3312 3507 0.947180 TTTTAGACGCGACCAGTGCC 60.947 55.000 15.93 0.00 0.00 5.01
3313 3508 3.620300 TTAGACGCGACCAGTGCCG 62.620 63.158 15.93 0.00 0.00 5.69
3333 3528 2.280186 GACCATGGGGACGATCGC 60.280 66.667 18.09 8.04 38.05 4.58
3339 3534 4.587189 GGGGACGATCGCCGGAAG 62.587 72.222 16.60 0.00 39.75 3.46
3340 3535 3.834799 GGGACGATCGCCGGAAGT 61.835 66.667 16.60 0.00 43.93 3.01
3341 3536 2.183555 GGACGATCGCCGGAAGTT 59.816 61.111 16.60 0.00 43.93 2.66
3342 3537 1.877165 GGACGATCGCCGGAAGTTC 60.877 63.158 16.60 2.01 43.93 3.01
3343 3538 2.202570 ACGATCGCCGGAAGTTCG 60.203 61.111 16.60 21.34 43.93 3.95
3344 3539 2.101575 CGATCGCCGGAAGTTCGA 59.898 61.111 19.48 12.93 38.25 3.71
3345 3540 1.515519 CGATCGCCGGAAGTTCGAA 60.516 57.895 19.48 0.00 37.63 3.71
3346 3541 1.740043 CGATCGCCGGAAGTTCGAAC 61.740 60.000 20.71 20.71 37.63 3.95
3347 3542 1.419107 GATCGCCGGAAGTTCGAACC 61.419 60.000 24.22 10.19 37.63 3.62
3348 3543 3.475774 CGCCGGAAGTTCGAACCG 61.476 66.667 24.22 19.97 45.24 4.44
3351 3546 3.475774 CGGAAGTTCGAACCGGCG 61.476 66.667 24.22 0.00 42.48 6.46
3352 3547 3.116531 GGAAGTTCGAACCGGCGG 61.117 66.667 27.06 27.06 0.00 6.13
3353 3548 3.785499 GAAGTTCGAACCGGCGGC 61.785 66.667 28.71 10.04 0.00 6.53
3372 3567 3.688159 GCCAGCAACAAGGCCCTG 61.688 66.667 0.00 0.00 45.18 4.45
3373 3568 3.688159 CCAGCAACAAGGCCCTGC 61.688 66.667 0.00 4.89 36.29 4.85
3374 3569 2.913578 CAGCAACAAGGCCCTGCA 60.914 61.111 16.39 0.00 38.58 4.41
3375 3570 2.599578 AGCAACAAGGCCCTGCAG 60.600 61.111 6.78 6.78 38.58 4.41
3376 3571 3.688159 GCAACAAGGCCCTGCAGG 61.688 66.667 26.87 26.87 36.09 4.85
3412 3607 3.986006 GGCACTGGTCGTCGTCCA 61.986 66.667 10.79 10.79 0.00 4.02
3413 3608 2.733593 GCACTGGTCGTCGTCCAC 60.734 66.667 7.14 0.00 0.00 4.02
3426 3621 3.515286 TCCACGGAGTCGCGGATC 61.515 66.667 6.13 4.38 41.98 3.36
3427 3622 4.907034 CCACGGAGTCGCGGATCG 62.907 72.222 6.13 8.38 41.61 3.69
3428 3623 4.175489 CACGGAGTCGCGGATCGT 62.175 66.667 6.13 9.06 41.61 3.73
3429 3624 4.175489 ACGGAGTCGCGGATCGTG 62.175 66.667 6.13 3.70 29.74 4.35
3430 3625 4.907034 CGGAGTCGCGGATCGTGG 62.907 72.222 6.13 0.00 37.97 4.94
3457 3652 4.323477 CGTGTTCGGGGGCAAGGA 62.323 66.667 0.00 0.00 0.00 3.36
3458 3653 2.671963 GTGTTCGGGGGCAAGGAC 60.672 66.667 0.00 0.00 0.00 3.85
3459 3654 3.961414 TGTTCGGGGGCAAGGACC 61.961 66.667 0.00 0.00 0.00 4.46
3469 3664 2.594303 CAAGGACCGGCACAGCAA 60.594 61.111 0.00 0.00 0.00 3.91
3470 3665 2.281761 AAGGACCGGCACAGCAAG 60.282 61.111 0.00 0.00 0.00 4.01
3471 3666 3.850098 AAGGACCGGCACAGCAAGG 62.850 63.158 0.00 0.00 34.85 3.61
3472 3667 4.643387 GGACCGGCACAGCAAGGT 62.643 66.667 0.00 7.87 42.01 3.50
3473 3668 3.357079 GACCGGCACAGCAAGGTG 61.357 66.667 0.00 0.00 40.13 4.00
3474 3669 3.825160 GACCGGCACAGCAAGGTGA 62.825 63.158 0.00 0.00 40.13 4.02
3480 3675 0.603707 GCACAGCAAGGTGAGCACTA 60.604 55.000 15.00 0.00 41.32 2.74
3618 5109 1.468127 TCGTACGCGTAGGATTCACAA 59.532 47.619 31.33 12.77 39.49 3.33
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
141 152 4.947147 GCGGGTGGGTTGCTGTCA 62.947 66.667 0.00 0.00 0.00 3.58
204 225 0.315568 GAGACGAGAACTGCAGTGGT 59.684 55.000 22.49 15.86 0.00 4.16
207 228 0.827925 TGGGAGACGAGAACTGCAGT 60.828 55.000 15.25 15.25 0.00 4.40
256 286 3.369400 TGGAATGCGTTTGGGCCG 61.369 61.111 0.00 0.00 0.00 6.13
263 293 0.751643 GGGCCTATGTGGAATGCGTT 60.752 55.000 0.84 0.00 38.35 4.84
268 298 2.056906 GAGCCGGGCCTATGTGGAAT 62.057 60.000 17.02 0.00 38.35 3.01
269 299 2.690881 AGCCGGGCCTATGTGGAA 60.691 61.111 17.02 0.00 38.35 3.53
275 305 1.383248 AGAACTGAGCCGGGCCTAT 60.383 57.895 17.02 0.00 0.00 2.57
276 306 2.038975 AGAACTGAGCCGGGCCTA 59.961 61.111 17.02 3.79 0.00 3.93
283 313 2.019984 CCTAAATGCCAGAACTGAGCC 58.980 52.381 3.19 0.00 0.00 4.70
286 316 2.642311 TCACCCTAAATGCCAGAACTGA 59.358 45.455 3.19 0.00 0.00 3.41
713 743 2.145037 ACGTTTCCGATGCTTGAAGCA 61.145 47.619 23.28 23.28 46.48 3.91
714 744 0.517316 ACGTTTCCGATGCTTGAAGC 59.483 50.000 10.84 10.84 38.71 3.86
715 745 3.785505 GCATACGTTTCCGATGCTTGAAG 60.786 47.826 11.99 0.00 40.85 3.02
716 746 2.095213 GCATACGTTTCCGATGCTTGAA 59.905 45.455 11.99 0.00 40.85 2.69
717 747 1.663643 GCATACGTTTCCGATGCTTGA 59.336 47.619 11.99 0.00 40.85 3.02
718 748 1.396648 TGCATACGTTTCCGATGCTTG 59.603 47.619 18.27 0.00 42.64 4.01
719 749 1.732941 TGCATACGTTTCCGATGCTT 58.267 45.000 18.27 0.00 42.64 3.91
720 750 1.732941 TTGCATACGTTTCCGATGCT 58.267 45.000 18.27 0.00 42.64 3.79
721 751 2.535934 TTTGCATACGTTTCCGATGC 57.464 45.000 12.29 12.29 42.58 3.91
722 752 3.168193 GGTTTTGCATACGTTTCCGATG 58.832 45.455 0.00 0.00 37.88 3.84
814 866 2.874701 CCATGCTTCGCTTAGCTACATT 59.125 45.455 1.76 0.00 41.76 2.71
818 870 1.480545 TGACCATGCTTCGCTTAGCTA 59.519 47.619 1.76 0.00 41.76 3.32
829 881 1.376424 CCTTGCTCGTGACCATGCT 60.376 57.895 0.00 0.00 0.00 3.79
830 882 0.955428 TTCCTTGCTCGTGACCATGC 60.955 55.000 0.00 0.00 0.00 4.06
831 883 0.798776 GTTCCTTGCTCGTGACCATG 59.201 55.000 0.00 0.00 0.00 3.66
832 884 0.321653 GGTTCCTTGCTCGTGACCAT 60.322 55.000 0.00 0.00 0.00 3.55
833 885 1.070786 GGTTCCTTGCTCGTGACCA 59.929 57.895 0.00 0.00 0.00 4.02
834 886 1.070786 TGGTTCCTTGCTCGTGACC 59.929 57.895 0.00 0.00 0.00 4.02
835 887 1.228657 GGTGGTTCCTTGCTCGTGAC 61.229 60.000 0.00 0.00 0.00 3.67
836 888 1.070786 GGTGGTTCCTTGCTCGTGA 59.929 57.895 0.00 0.00 0.00 4.35
837 889 0.817634 TTGGTGGTTCCTTGCTCGTG 60.818 55.000 0.00 0.00 37.07 4.35
838 890 0.110486 ATTGGTGGTTCCTTGCTCGT 59.890 50.000 0.00 0.00 37.07 4.18
839 891 0.523072 CATTGGTGGTTCCTTGCTCG 59.477 55.000 0.00 0.00 37.07 5.03
840 892 0.244721 GCATTGGTGGTTCCTTGCTC 59.755 55.000 0.00 0.00 40.38 4.26
841 893 1.187567 GGCATTGGTGGTTCCTTGCT 61.188 55.000 10.35 0.00 41.93 3.91
842 894 1.293179 GGCATTGGTGGTTCCTTGC 59.707 57.895 0.00 0.00 41.71 4.01
843 895 1.066716 CATGGCATTGGTGGTTCCTTG 60.067 52.381 0.00 0.00 37.07 3.61
844 896 1.269012 CATGGCATTGGTGGTTCCTT 58.731 50.000 0.00 0.00 37.07 3.36
894 963 1.421346 TATGCAGGGGAGCTGGATGG 61.421 60.000 0.00 0.00 34.74 3.51
927 996 0.461961 GATGGGAGGTTCAGAGGACG 59.538 60.000 0.00 0.00 0.00 4.79
938 1007 2.842058 GGCCTGATGGATGGGAGG 59.158 66.667 0.00 0.00 34.57 4.30
949 1018 1.220749 GTACTTGATGCCGGCCTGA 59.779 57.895 26.77 5.00 0.00 3.86
954 1023 1.369091 GCACCTGTACTTGATGCCGG 61.369 60.000 0.00 0.00 0.00 6.13
975 1044 0.457509 ATGTTCGTCTCGCTGCTCAG 60.458 55.000 0.00 0.00 0.00 3.35
982 1051 2.474526 CCATTGACAATGTTCGTCTCGC 60.475 50.000 23.27 0.00 37.18 5.03
989 1058 1.812571 AGGACGCCATTGACAATGTTC 59.187 47.619 23.27 16.48 37.18 3.18
990 1059 1.812571 GAGGACGCCATTGACAATGTT 59.187 47.619 23.27 9.93 37.18 2.71
997 1070 1.900351 CTCCTGAGGACGCCATTGA 59.100 57.895 0.00 0.00 0.00 2.57
1083 1156 2.439156 GTGAGCATGTGGCCCTCC 60.439 66.667 0.00 0.00 46.50 4.30
1124 1203 3.002553 GCCAAAAACAGAATGCCAAGTTG 59.997 43.478 0.00 0.00 42.53 3.16
1131 1210 2.997986 CAGGATGCCAAAAACAGAATGC 59.002 45.455 0.00 0.00 42.53 3.56
1158 1249 3.364964 CCCATTTACAGTTTCAGTGACGC 60.365 47.826 0.00 0.00 0.00 5.19
1161 1252 5.042463 TCACCCATTTACAGTTTCAGTGA 57.958 39.130 0.00 0.00 0.00 3.41
1171 1265 6.572119 GCAACAGAATCAATCACCCATTTACA 60.572 38.462 0.00 0.00 0.00 2.41
1172 1266 5.807011 GCAACAGAATCAATCACCCATTTAC 59.193 40.000 0.00 0.00 0.00 2.01
1181 1275 1.199789 GCCACGCAACAGAATCAATCA 59.800 47.619 0.00 0.00 0.00 2.57
1190 1284 1.376424 AGATCCTGCCACGCAACAG 60.376 57.895 0.00 0.00 38.41 3.16
1400 1495 4.669842 TGCTGCTCGCTCGCTGTT 62.670 61.111 0.00 0.00 40.11 3.16
1405 1500 4.836688 TACGCTGCTGCTCGCTCG 62.837 66.667 14.03 0.00 40.11 5.03
1423 1518 6.173339 TCACCAGATCCAAACAGAGTTTATC 58.827 40.000 0.00 0.00 0.00 1.75
1438 1534 5.295950 ACGATCATCTCAATTCACCAGATC 58.704 41.667 0.00 0.00 0.00 2.75
1441 1537 3.488678 CGACGATCATCTCAATTCACCAG 59.511 47.826 0.00 0.00 0.00 4.00
1443 1539 3.243877 CACGACGATCATCTCAATTCACC 59.756 47.826 0.00 0.00 0.00 4.02
1444 1540 3.859961 ACACGACGATCATCTCAATTCAC 59.140 43.478 0.00 0.00 0.00 3.18
1445 1541 4.105486 GACACGACGATCATCTCAATTCA 58.895 43.478 0.00 0.00 0.00 2.57
1446 1542 3.487574 GGACACGACGATCATCTCAATTC 59.512 47.826 0.00 0.00 0.00 2.17
1448 1544 2.541794 CGGACACGACGATCATCTCAAT 60.542 50.000 0.00 0.00 44.60 2.57
1450 1546 0.377203 CGGACACGACGATCATCTCA 59.623 55.000 0.00 0.00 44.60 3.27
1451 1547 0.656259 TCGGACACGACGATCATCTC 59.344 55.000 0.00 0.00 45.59 2.75
1597 1697 1.860950 CAAGATATCAACACCCTCGCG 59.139 52.381 0.00 0.00 0.00 5.87
1633 1734 7.675062 AGAACTCTGAACAGTGATTACTCATT 58.325 34.615 10.20 0.00 34.07 2.57
1634 1735 7.238486 AGAACTCTGAACAGTGATTACTCAT 57.762 36.000 10.20 0.00 34.07 2.90
1635 1736 6.656632 AGAACTCTGAACAGTGATTACTCA 57.343 37.500 10.20 0.00 34.07 3.41
1636 1737 7.115663 GTCAAGAACTCTGAACAGTGATTACTC 59.884 40.741 10.20 1.11 34.07 2.59
1637 1738 6.926272 GTCAAGAACTCTGAACAGTGATTACT 59.074 38.462 10.20 0.00 37.75 2.24
1638 1739 6.926272 AGTCAAGAACTCTGAACAGTGATTAC 59.074 38.462 10.20 0.00 30.02 1.89
1639 1740 6.925718 CAGTCAAGAACTCTGAACAGTGATTA 59.074 38.462 10.20 0.00 35.45 1.75
1640 1741 5.757320 CAGTCAAGAACTCTGAACAGTGATT 59.243 40.000 10.20 2.50 35.45 2.57
1651 1752 4.063689 CAACAGATGCAGTCAAGAACTCT 58.936 43.478 0.00 0.00 35.45 3.24
1755 1857 7.973388 GCAGTGATCACAGGATTACTAGATATC 59.027 40.741 27.02 0.00 45.52 1.63
1757 1859 6.777580 TGCAGTGATCACAGGATTACTAGATA 59.222 38.462 27.02 0.00 45.52 1.98
1776 1881 0.678395 AGAGACTGGTCTGTGCAGTG 59.322 55.000 8.06 0.00 40.61 3.66
1778 1883 0.964700 TCAGAGACTGGTCTGTGCAG 59.035 55.000 18.96 0.00 46.77 4.41
1810 1925 7.340487 TGCACATACATACCATGGACAAAATTA 59.660 33.333 21.47 0.00 33.60 1.40
1846 1961 3.228017 TCGCTCGTGAACCCCACA 61.228 61.111 0.00 0.00 45.98 4.17
1932 2047 1.129917 AGGATCATGAGTGGGAGCTG 58.870 55.000 0.09 0.00 0.00 4.24
1933 2048 1.890552 AAGGATCATGAGTGGGAGCT 58.109 50.000 0.09 0.00 0.00 4.09
1934 2049 2.224402 GGTAAGGATCATGAGTGGGAGC 60.224 54.545 0.09 0.00 0.00 4.70
1935 2050 3.070734 CAGGTAAGGATCATGAGTGGGAG 59.929 52.174 0.09 0.00 0.00 4.30
1936 2051 3.041211 CAGGTAAGGATCATGAGTGGGA 58.959 50.000 0.09 0.00 0.00 4.37
1937 2052 2.774234 ACAGGTAAGGATCATGAGTGGG 59.226 50.000 0.09 0.00 0.00 4.61
1938 2053 5.104941 TGTTACAGGTAAGGATCATGAGTGG 60.105 44.000 0.09 0.00 0.00 4.00
1939 2054 5.812642 GTGTTACAGGTAAGGATCATGAGTG 59.187 44.000 0.09 0.00 0.00 3.51
1940 2055 5.483937 TGTGTTACAGGTAAGGATCATGAGT 59.516 40.000 0.09 0.00 0.00 3.41
1941 2056 5.812642 GTGTGTTACAGGTAAGGATCATGAG 59.187 44.000 0.09 0.00 0.00 2.90
1942 2057 5.483937 AGTGTGTTACAGGTAAGGATCATGA 59.516 40.000 0.00 0.00 0.00 3.07
1943 2058 5.734720 AGTGTGTTACAGGTAAGGATCATG 58.265 41.667 0.00 0.00 0.00 3.07
1944 2059 6.439375 TGTAGTGTGTTACAGGTAAGGATCAT 59.561 38.462 0.00 0.00 0.00 2.45
1945 2060 5.776208 TGTAGTGTGTTACAGGTAAGGATCA 59.224 40.000 0.00 0.00 0.00 2.92
1946 2061 6.098017 GTGTAGTGTGTTACAGGTAAGGATC 58.902 44.000 0.00 0.00 34.41 3.36
1947 2062 5.541101 TGTGTAGTGTGTTACAGGTAAGGAT 59.459 40.000 0.00 0.00 34.41 3.24
1953 2068 4.475051 TTGTGTGTAGTGTGTTACAGGT 57.525 40.909 0.00 0.00 34.41 4.00
1977 2092 3.360249 AGCTCTGTTTTTGTGACATGC 57.640 42.857 0.00 0.00 0.00 4.06
2148 2263 4.559153 CCGGTTGATTTTGATTTTCAGCT 58.441 39.130 0.00 0.00 0.00 4.24
2150 2265 4.305769 TGCCGGTTGATTTTGATTTTCAG 58.694 39.130 1.90 0.00 0.00 3.02
2153 2268 4.039124 AGACTGCCGGTTGATTTTGATTTT 59.961 37.500 1.90 0.00 0.00 1.82
2157 2272 2.151202 GAGACTGCCGGTTGATTTTGA 58.849 47.619 1.90 0.00 0.00 2.69
2162 2277 1.278985 TGATTGAGACTGCCGGTTGAT 59.721 47.619 1.90 0.00 0.00 2.57
2163 2278 0.684535 TGATTGAGACTGCCGGTTGA 59.315 50.000 1.90 0.00 0.00 3.18
2164 2279 0.798776 GTGATTGAGACTGCCGGTTG 59.201 55.000 1.90 0.00 0.00 3.77
2166 2281 0.396435 TTGTGATTGAGACTGCCGGT 59.604 50.000 1.90 0.00 0.00 5.28
2167 2282 1.522668 TTTGTGATTGAGACTGCCGG 58.477 50.000 0.00 0.00 0.00 6.13
2168 2283 2.485426 ACATTTGTGATTGAGACTGCCG 59.515 45.455 0.00 0.00 0.00 5.69
2169 2284 7.823647 GAGCACATTTGTGATTGAGACTGCC 62.824 48.000 14.66 0.00 45.57 4.85
2170 2285 4.905369 GAGCACATTTGTGATTGAGACTGC 60.905 45.833 14.66 0.00 45.57 4.40
2176 2294 3.753815 TGGAGAGCACATTTGTGATTGA 58.246 40.909 14.66 0.00 45.57 2.57
2185 2303 0.323178 CTGGCCTTGGAGAGCACATT 60.323 55.000 3.32 0.00 0.00 2.71
2187 2305 2.752358 CTGGCCTTGGAGAGCACA 59.248 61.111 3.32 0.00 0.00 4.57
2200 2351 2.508526 AGTTTCAGACATGTTCCTGGC 58.491 47.619 13.06 5.92 0.00 4.85
2239 2390 9.553064 GGAAGAAGACAGACATTATGACATTAT 57.447 33.333 0.00 0.00 0.00 1.28
2241 2392 7.628234 AGGAAGAAGACAGACATTATGACATT 58.372 34.615 0.00 0.00 0.00 2.71
2242 2393 7.192852 AGGAAGAAGACAGACATTATGACAT 57.807 36.000 0.00 0.00 0.00 3.06
2243 2394 6.351371 GGAGGAAGAAGACAGACATTATGACA 60.351 42.308 0.00 0.00 0.00 3.58
2244 2395 6.045955 GGAGGAAGAAGACAGACATTATGAC 58.954 44.000 0.00 0.00 0.00 3.06
2246 2397 5.982356 TGGAGGAAGAAGACAGACATTATG 58.018 41.667 0.00 0.00 0.00 1.90
2247 2398 5.130145 CCTGGAGGAAGAAGACAGACATTAT 59.870 44.000 0.00 0.00 37.39 1.28
2248 2399 4.467795 CCTGGAGGAAGAAGACAGACATTA 59.532 45.833 0.00 0.00 37.39 1.90
2291 2444 1.225745 CGCGCAATCTTTCCACGAC 60.226 57.895 8.75 0.00 0.00 4.34
2294 2447 1.134694 GTCCGCGCAATCTTTCCAC 59.865 57.895 8.75 0.00 0.00 4.02
2336 2489 2.028190 CCTATGCTCTCCGTGGCG 59.972 66.667 0.00 0.00 0.00 5.69
2438 2596 1.546923 TGGCAATGGCTTGATGAACAG 59.453 47.619 8.59 0.00 40.87 3.16
2466 2624 0.247736 GAAGCATCACGGTGAGGACT 59.752 55.000 25.24 17.76 27.97 3.85
2472 2630 0.163788 GTTCACGAAGCATCACGGTG 59.836 55.000 0.56 0.56 0.00 4.94
2475 2633 0.179240 GCAGTTCACGAAGCATCACG 60.179 55.000 0.00 0.00 0.00 4.35
2490 2648 1.178276 CCGAAGTAGTCCTCTGCAGT 58.822 55.000 14.67 0.00 0.00 4.40
2585 2743 3.256960 TGGGCCTTGTGGTCTCCC 61.257 66.667 4.53 0.00 38.23 4.30
2711 2874 3.574396 CCTACAGTATCATCGTGTCCCAT 59.426 47.826 0.00 0.00 0.00 4.00
2716 2879 4.576873 CAGTCTCCTACAGTATCATCGTGT 59.423 45.833 0.00 0.00 0.00 4.49
2717 2880 4.555708 GCAGTCTCCTACAGTATCATCGTG 60.556 50.000 0.00 0.00 0.00 4.35
2718 2881 3.566322 GCAGTCTCCTACAGTATCATCGT 59.434 47.826 0.00 0.00 0.00 3.73
2719 2882 3.818210 AGCAGTCTCCTACAGTATCATCG 59.182 47.826 0.00 0.00 0.00 3.84
2720 2883 4.558496 GCAGCAGTCTCCTACAGTATCATC 60.558 50.000 0.00 0.00 0.00 2.92
2723 2886 2.955660 AGCAGCAGTCTCCTACAGTATC 59.044 50.000 0.00 0.00 0.00 2.24
2725 2888 2.516227 AGCAGCAGTCTCCTACAGTA 57.484 50.000 0.00 0.00 0.00 2.74
2726 2889 2.494073 GTTAGCAGCAGTCTCCTACAGT 59.506 50.000 0.00 0.00 0.00 3.55
2727 2890 2.757868 AGTTAGCAGCAGTCTCCTACAG 59.242 50.000 0.00 0.00 0.00 2.74
2766 2940 5.863397 CGCAAACAATTATTCAGTGGTCATT 59.137 36.000 0.00 0.00 0.00 2.57
2771 2945 3.853671 GCTCGCAAACAATTATTCAGTGG 59.146 43.478 0.00 0.00 0.00 4.00
2774 2952 2.527487 GCGCTCGCAAACAATTATTCAG 59.473 45.455 9.59 0.00 41.49 3.02
2796 2974 1.640428 TGCATACACGCTAGCTGTTC 58.360 50.000 20.08 12.59 0.00 3.18
2812 2990 3.423749 ACATCTTTGGACATGACATGCA 58.576 40.909 15.49 3.57 0.00 3.96
2813 2991 4.877823 TCTACATCTTTGGACATGACATGC 59.122 41.667 15.49 8.15 0.00 4.06
2920 3108 2.746904 CCTTGCCGTGACAAATGTATCA 59.253 45.455 0.00 0.00 0.00 2.15
2921 3109 2.477863 GCCTTGCCGTGACAAATGTATC 60.478 50.000 0.00 0.00 0.00 2.24
2944 3132 4.919849 TGTACAGAGTGTGGACACGATCC 61.920 52.174 0.07 3.82 42.99 3.36
2963 3151 4.926832 CACGACAAATGGTACTGATGTGTA 59.073 41.667 0.00 0.00 0.00 2.90
2987 3175 2.035066 ACAAAACTGCAAGGAGTCATGC 59.965 45.455 11.97 11.97 42.86 4.06
2994 3182 4.415881 TGTAGAGACAAAACTGCAAGGA 57.584 40.909 0.00 0.00 31.95 3.36
2995 3183 5.695851 AATGTAGAGACAAAACTGCAAGG 57.304 39.130 0.00 0.00 39.59 3.61
2996 3184 9.683069 ATTTAAATGTAGAGACAAAACTGCAAG 57.317 29.630 0.00 0.00 39.59 4.01
3025 3220 3.570550 AGGACTCGTGATGCTATTACCTC 59.429 47.826 0.00 0.00 0.00 3.85
3026 3221 3.319405 CAGGACTCGTGATGCTATTACCT 59.681 47.826 0.00 0.00 0.00 3.08
3027 3222 3.318275 TCAGGACTCGTGATGCTATTACC 59.682 47.826 0.00 0.00 0.00 2.85
3028 3223 4.569761 TCAGGACTCGTGATGCTATTAC 57.430 45.455 0.00 0.00 0.00 1.89
3029 3224 5.127194 AGTTTCAGGACTCGTGATGCTATTA 59.873 40.000 2.33 0.00 0.00 0.98
3030 3225 4.081420 AGTTTCAGGACTCGTGATGCTATT 60.081 41.667 2.33 0.00 0.00 1.73
3031 3226 3.449018 AGTTTCAGGACTCGTGATGCTAT 59.551 43.478 2.33 0.00 0.00 2.97
3032 3227 2.826128 AGTTTCAGGACTCGTGATGCTA 59.174 45.455 2.33 0.00 0.00 3.49
3033 3228 1.620819 AGTTTCAGGACTCGTGATGCT 59.379 47.619 2.33 2.05 0.00 3.79
3034 3229 2.086054 AGTTTCAGGACTCGTGATGC 57.914 50.000 2.33 0.00 0.00 3.91
3035 3230 3.393800 ACAAGTTTCAGGACTCGTGATG 58.606 45.455 2.33 1.32 0.00 3.07
3036 3231 3.322254 AGACAAGTTTCAGGACTCGTGAT 59.678 43.478 2.33 0.00 0.00 3.06
3037 3232 2.693591 AGACAAGTTTCAGGACTCGTGA 59.306 45.455 0.00 0.00 0.00 4.35
3038 3233 3.099267 AGACAAGTTTCAGGACTCGTG 57.901 47.619 0.00 0.00 0.00 4.35
3039 3234 3.132289 TCAAGACAAGTTTCAGGACTCGT 59.868 43.478 0.00 0.00 0.00 4.18
3040 3235 3.717707 TCAAGACAAGTTTCAGGACTCG 58.282 45.455 0.00 0.00 0.00 4.18
3041 3236 5.529060 ACATTCAAGACAAGTTTCAGGACTC 59.471 40.000 0.00 0.00 0.00 3.36
3042 3237 5.297776 CACATTCAAGACAAGTTTCAGGACT 59.702 40.000 0.00 0.00 0.00 3.85
3043 3238 5.296780 TCACATTCAAGACAAGTTTCAGGAC 59.703 40.000 0.00 0.00 0.00 3.85
3044 3239 5.436175 TCACATTCAAGACAAGTTTCAGGA 58.564 37.500 0.00 0.00 0.00 3.86
3045 3240 5.756195 TCACATTCAAGACAAGTTTCAGG 57.244 39.130 0.00 0.00 0.00 3.86
3046 3241 9.552114 GATTATCACATTCAAGACAAGTTTCAG 57.448 33.333 0.00 0.00 0.00 3.02
3047 3242 9.288576 AGATTATCACATTCAAGACAAGTTTCA 57.711 29.630 0.00 0.00 0.00 2.69
3050 3245 9.950496 ACTAGATTATCACATTCAAGACAAGTT 57.050 29.630 0.00 0.00 0.00 2.66
3051 3246 9.950496 AACTAGATTATCACATTCAAGACAAGT 57.050 29.630 0.00 0.00 0.00 3.16
3053 3248 9.942850 TGAACTAGATTATCACATTCAAGACAA 57.057 29.630 0.00 0.00 0.00 3.18
3054 3249 9.942850 TTGAACTAGATTATCACATTCAAGACA 57.057 29.630 11.22 0.00 32.43 3.41
3088 3283 9.816354 AGTTGTAAGATGCAATAGTTTGTTTTT 57.184 25.926 0.00 0.00 35.17 1.94
3089 3284 9.816354 AAGTTGTAAGATGCAATAGTTTGTTTT 57.184 25.926 0.00 0.00 35.17 2.43
3090 3285 9.248291 CAAGTTGTAAGATGCAATAGTTTGTTT 57.752 29.630 0.00 0.00 35.17 2.83
3091 3286 7.382218 GCAAGTTGTAAGATGCAATAGTTTGTT 59.618 33.333 4.48 0.00 38.63 2.83
3092 3287 6.863126 GCAAGTTGTAAGATGCAATAGTTTGT 59.137 34.615 4.48 0.00 38.63 2.83
3093 3288 6.862608 TGCAAGTTGTAAGATGCAATAGTTTG 59.137 34.615 4.48 0.00 45.04 2.93
3094 3289 6.980593 TGCAAGTTGTAAGATGCAATAGTTT 58.019 32.000 4.48 0.00 45.04 2.66
3095 3290 6.573664 TGCAAGTTGTAAGATGCAATAGTT 57.426 33.333 4.48 0.00 45.04 2.24
3102 3297 4.439305 TTGGATGCAAGTTGTAAGATGC 57.561 40.909 4.48 0.00 39.22 3.91
3103 3298 5.803461 CACATTGGATGCAAGTTGTAAGATG 59.197 40.000 5.69 6.28 0.00 2.90
3104 3299 5.477984 ACACATTGGATGCAAGTTGTAAGAT 59.522 36.000 12.74 0.00 0.00 2.40
3105 3300 4.826733 ACACATTGGATGCAAGTTGTAAGA 59.173 37.500 12.74 0.00 0.00 2.10
3106 3301 5.125100 ACACATTGGATGCAAGTTGTAAG 57.875 39.130 12.74 3.00 0.00 2.34
3107 3302 6.641169 TTACACATTGGATGCAAGTTGTAA 57.359 33.333 22.04 22.04 0.00 2.41
3108 3303 6.641169 TTTACACATTGGATGCAAGTTGTA 57.359 33.333 15.35 15.35 0.00 2.41
3109 3304 5.528043 TTTACACATTGGATGCAAGTTGT 57.472 34.783 16.92 16.92 0.00 3.32
3110 3305 7.171167 TCAAATTTACACATTGGATGCAAGTTG 59.829 33.333 5.69 7.36 0.00 3.16
3111 3306 7.215789 TCAAATTTACACATTGGATGCAAGTT 58.784 30.769 5.69 0.00 0.00 2.66
3112 3307 6.757237 TCAAATTTACACATTGGATGCAAGT 58.243 32.000 5.69 0.65 0.00 3.16
3113 3308 7.010738 GGATCAAATTTACACATTGGATGCAAG 59.989 37.037 5.69 0.60 35.79 4.01
3114 3309 6.817641 GGATCAAATTTACACATTGGATGCAA 59.182 34.615 0.79 0.79 35.79 4.08
3115 3310 6.154877 AGGATCAAATTTACACATTGGATGCA 59.845 34.615 5.43 0.00 37.38 3.96
3116 3311 6.576185 AGGATCAAATTTACACATTGGATGC 58.424 36.000 0.00 0.00 35.91 3.91
3117 3312 7.864379 GCTAGGATCAAATTTACACATTGGATG 59.136 37.037 0.00 0.00 28.31 3.51
3118 3313 7.014615 GGCTAGGATCAAATTTACACATTGGAT 59.985 37.037 0.00 0.00 30.50 3.41
3119 3314 6.321181 GGCTAGGATCAAATTTACACATTGGA 59.679 38.462 0.00 0.00 0.00 3.53
3120 3315 6.096705 TGGCTAGGATCAAATTTACACATTGG 59.903 38.462 0.00 0.00 0.00 3.16
3121 3316 7.099266 TGGCTAGGATCAAATTTACACATTG 57.901 36.000 0.00 0.00 0.00 2.82
3122 3317 7.716799 TTGGCTAGGATCAAATTTACACATT 57.283 32.000 0.00 0.00 0.00 2.71
3123 3318 7.560991 TGATTGGCTAGGATCAAATTTACACAT 59.439 33.333 0.00 0.00 29.82 3.21
3124 3319 6.889177 TGATTGGCTAGGATCAAATTTACACA 59.111 34.615 0.00 0.00 29.82 3.72
3125 3320 7.283127 TCTGATTGGCTAGGATCAAATTTACAC 59.717 37.037 0.00 0.00 32.33 2.90
3126 3321 7.283127 GTCTGATTGGCTAGGATCAAATTTACA 59.717 37.037 0.00 0.00 32.33 2.41
3127 3322 7.283127 TGTCTGATTGGCTAGGATCAAATTTAC 59.717 37.037 0.00 0.00 32.33 2.01
3128 3323 7.345691 TGTCTGATTGGCTAGGATCAAATTTA 58.654 34.615 0.00 0.00 32.33 1.40
3129 3324 6.189859 TGTCTGATTGGCTAGGATCAAATTT 58.810 36.000 0.00 0.00 32.33 1.82
3130 3325 5.759059 TGTCTGATTGGCTAGGATCAAATT 58.241 37.500 0.00 0.00 32.33 1.82
3131 3326 5.378230 TGTCTGATTGGCTAGGATCAAAT 57.622 39.130 0.00 0.00 32.33 2.32
3132 3327 4.842531 TGTCTGATTGGCTAGGATCAAA 57.157 40.909 0.00 0.00 32.33 2.69
3133 3328 4.019411 TGTTGTCTGATTGGCTAGGATCAA 60.019 41.667 0.00 0.00 32.33 2.57
3134 3329 3.519107 TGTTGTCTGATTGGCTAGGATCA 59.481 43.478 0.00 0.00 0.00 2.92
3135 3330 4.142609 TGTTGTCTGATTGGCTAGGATC 57.857 45.455 0.00 0.00 0.00 3.36
3136 3331 4.265073 GTTGTTGTCTGATTGGCTAGGAT 58.735 43.478 0.00 0.00 0.00 3.24
3137 3332 3.674997 GTTGTTGTCTGATTGGCTAGGA 58.325 45.455 0.00 0.00 0.00 2.94
3138 3333 2.416547 CGTTGTTGTCTGATTGGCTAGG 59.583 50.000 0.00 0.00 0.00 3.02
3139 3334 3.123621 GTCGTTGTTGTCTGATTGGCTAG 59.876 47.826 0.00 0.00 0.00 3.42
3140 3335 3.064207 GTCGTTGTTGTCTGATTGGCTA 58.936 45.455 0.00 0.00 0.00 3.93
3141 3336 1.873591 GTCGTTGTTGTCTGATTGGCT 59.126 47.619 0.00 0.00 0.00 4.75
3142 3337 1.601903 TGTCGTTGTTGTCTGATTGGC 59.398 47.619 0.00 0.00 0.00 4.52
3143 3338 3.312421 AGTTGTCGTTGTTGTCTGATTGG 59.688 43.478 0.00 0.00 0.00 3.16
3144 3339 4.274069 CAGTTGTCGTTGTTGTCTGATTG 58.726 43.478 0.00 0.00 0.00 2.67
3145 3340 3.312421 CCAGTTGTCGTTGTTGTCTGATT 59.688 43.478 0.00 0.00 0.00 2.57
3146 3341 2.872245 CCAGTTGTCGTTGTTGTCTGAT 59.128 45.455 0.00 0.00 0.00 2.90
3147 3342 2.093921 TCCAGTTGTCGTTGTTGTCTGA 60.094 45.455 0.00 0.00 0.00 3.27
3148 3343 2.276201 TCCAGTTGTCGTTGTTGTCTG 58.724 47.619 0.00 0.00 0.00 3.51
3149 3344 2.550978 CTCCAGTTGTCGTTGTTGTCT 58.449 47.619 0.00 0.00 0.00 3.41
3150 3345 1.003866 GCTCCAGTTGTCGTTGTTGTC 60.004 52.381 0.00 0.00 0.00 3.18
3151 3346 1.014352 GCTCCAGTTGTCGTTGTTGT 58.986 50.000 0.00 0.00 0.00 3.32
3152 3347 0.307760 GGCTCCAGTTGTCGTTGTTG 59.692 55.000 0.00 0.00 0.00 3.33
3153 3348 0.107410 TGGCTCCAGTTGTCGTTGTT 60.107 50.000 0.00 0.00 0.00 2.83
3154 3349 0.107410 TTGGCTCCAGTTGTCGTTGT 60.107 50.000 0.00 0.00 0.00 3.32
3155 3350 0.588252 CTTGGCTCCAGTTGTCGTTG 59.412 55.000 0.00 0.00 0.00 4.10
3156 3351 0.180406 ACTTGGCTCCAGTTGTCGTT 59.820 50.000 0.00 0.00 0.00 3.85
3157 3352 0.249911 GACTTGGCTCCAGTTGTCGT 60.250 55.000 0.00 0.00 0.00 4.34
3158 3353 0.249868 TGACTTGGCTCCAGTTGTCG 60.250 55.000 11.28 0.00 0.00 4.35
3159 3354 1.517242 CTGACTTGGCTCCAGTTGTC 58.483 55.000 9.96 9.96 0.00 3.18
3160 3355 0.536006 GCTGACTTGGCTCCAGTTGT 60.536 55.000 0.00 0.00 0.00 3.32
3161 3356 0.535780 TGCTGACTTGGCTCCAGTTG 60.536 55.000 0.00 0.00 0.00 3.16
3162 3357 0.536006 GTGCTGACTTGGCTCCAGTT 60.536 55.000 0.00 0.00 0.00 3.16
3163 3358 1.072159 GTGCTGACTTGGCTCCAGT 59.928 57.895 0.00 0.00 0.00 4.00
3164 3359 0.954449 CTGTGCTGACTTGGCTCCAG 60.954 60.000 0.00 0.00 0.00 3.86
3165 3360 1.071987 CTGTGCTGACTTGGCTCCA 59.928 57.895 0.00 0.00 0.00 3.86
3166 3361 2.331132 GCTGTGCTGACTTGGCTCC 61.331 63.158 0.00 0.00 0.00 4.70
3167 3362 2.331132 GGCTGTGCTGACTTGGCTC 61.331 63.158 0.00 0.00 0.00 4.70
3168 3363 2.282040 GGCTGTGCTGACTTGGCT 60.282 61.111 0.00 0.00 0.00 4.75
3169 3364 3.368571 GGGCTGTGCTGACTTGGC 61.369 66.667 0.00 0.00 0.00 4.52
3170 3365 0.896940 AATGGGCTGTGCTGACTTGG 60.897 55.000 0.00 0.00 0.00 3.61
3171 3366 0.242825 CAATGGGCTGTGCTGACTTG 59.757 55.000 0.00 0.00 0.00 3.16
3172 3367 1.530013 GCAATGGGCTGTGCTGACTT 61.530 55.000 1.25 0.00 40.25 3.01
3173 3368 1.975407 GCAATGGGCTGTGCTGACT 60.975 57.895 1.25 0.00 40.25 3.41
3174 3369 2.570181 GCAATGGGCTGTGCTGAC 59.430 61.111 1.25 0.00 40.25 3.51
3175 3370 2.677524 GGCAATGGGCTGTGCTGA 60.678 61.111 7.35 0.00 44.01 4.26
3176 3371 3.766691 GGGCAATGGGCTGTGCTG 61.767 66.667 0.00 0.00 44.01 4.41
3179 3374 4.700448 TGGGGGCAATGGGCTGTG 62.700 66.667 0.00 0.00 44.01 3.66
3180 3375 4.702274 GTGGGGGCAATGGGCTGT 62.702 66.667 0.00 0.00 44.01 4.40
3181 3376 4.387343 AGTGGGGGCAATGGGCTG 62.387 66.667 0.00 0.00 44.01 4.85
3182 3377 4.066139 GAGTGGGGGCAATGGGCT 62.066 66.667 0.00 0.00 44.01 5.19
3184 3379 2.934363 GATGGAGTGGGGGCAATGGG 62.934 65.000 0.00 0.00 0.00 4.00
3185 3380 1.456331 GATGGAGTGGGGGCAATGG 60.456 63.158 0.00 0.00 0.00 3.16
3186 3381 1.456331 GGATGGAGTGGGGGCAATG 60.456 63.158 0.00 0.00 0.00 2.82
3187 3382 3.018901 GGATGGAGTGGGGGCAAT 58.981 61.111 0.00 0.00 0.00 3.56
3188 3383 3.727258 CGGATGGAGTGGGGGCAA 61.727 66.667 0.00 0.00 0.00 4.52
3191 3386 3.480133 GACCGGATGGAGTGGGGG 61.480 72.222 9.46 0.00 39.21 5.40
3192 3387 2.687200 TGACCGGATGGAGTGGGG 60.687 66.667 9.46 0.00 39.21 4.96
3193 3388 2.903357 CTGACCGGATGGAGTGGG 59.097 66.667 9.46 0.00 39.21 4.61
3194 3389 2.187946 GCTGACCGGATGGAGTGG 59.812 66.667 9.46 0.00 39.21 4.00
3195 3390 2.202797 CGCTGACCGGATGGAGTG 60.203 66.667 9.46 0.27 39.21 3.51
3196 3391 4.148825 GCGCTGACCGGATGGAGT 62.149 66.667 9.46 0.00 39.21 3.85
3197 3392 4.899239 GGCGCTGACCGGATGGAG 62.899 72.222 9.46 0.00 39.21 3.86
3205 3400 3.194272 AAAAAGTGCGGCGCTGACC 62.194 57.895 33.26 17.29 0.00 4.02
3206 3401 2.010817 CAAAAAGTGCGGCGCTGAC 61.011 57.895 33.26 23.21 0.00 3.51
3207 3402 2.331098 CAAAAAGTGCGGCGCTGA 59.669 55.556 33.26 11.23 0.00 4.26
3208 3403 3.397317 GCAAAAAGTGCGGCGCTG 61.397 61.111 33.26 21.83 45.10 5.18
3216 3411 4.559153 CAGGGAGGTAATTGCAAAAAGTG 58.441 43.478 1.71 0.00 0.00 3.16
3217 3412 3.578282 CCAGGGAGGTAATTGCAAAAAGT 59.422 43.478 1.71 0.00 0.00 2.66
3218 3413 3.617288 GCCAGGGAGGTAATTGCAAAAAG 60.617 47.826 1.71 0.00 40.61 2.27
3219 3414 2.301583 GCCAGGGAGGTAATTGCAAAAA 59.698 45.455 1.71 0.00 40.61 1.94
3220 3415 1.899142 GCCAGGGAGGTAATTGCAAAA 59.101 47.619 1.71 0.00 40.61 2.44
3221 3416 1.555967 GCCAGGGAGGTAATTGCAAA 58.444 50.000 1.71 0.00 40.61 3.68
3222 3417 0.324275 GGCCAGGGAGGTAATTGCAA 60.324 55.000 0.00 0.00 40.61 4.08
3223 3418 1.214305 AGGCCAGGGAGGTAATTGCA 61.214 55.000 5.01 0.00 40.61 4.08
3224 3419 0.033109 AAGGCCAGGGAGGTAATTGC 60.033 55.000 5.01 0.00 40.61 3.56
3225 3420 2.749800 GCTAAGGCCAGGGAGGTAATTG 60.750 54.545 5.01 0.00 40.61 2.32
3226 3421 1.495148 GCTAAGGCCAGGGAGGTAATT 59.505 52.381 5.01 0.00 40.61 1.40
3227 3422 1.141185 GCTAAGGCCAGGGAGGTAAT 58.859 55.000 5.01 0.00 40.61 1.89
3228 3423 0.252974 TGCTAAGGCCAGGGAGGTAA 60.253 55.000 5.01 0.00 40.61 2.85
3229 3424 0.981277 GTGCTAAGGCCAGGGAGGTA 60.981 60.000 5.01 0.00 40.61 3.08
3230 3425 2.124996 TGCTAAGGCCAGGGAGGT 59.875 61.111 5.01 0.00 40.61 3.85
3231 3426 1.852157 TTGTGCTAAGGCCAGGGAGG 61.852 60.000 5.01 0.00 41.84 4.30
3232 3427 0.038166 TTTGTGCTAAGGCCAGGGAG 59.962 55.000 5.01 0.00 37.74 4.30
3233 3428 0.704076 ATTTGTGCTAAGGCCAGGGA 59.296 50.000 5.01 0.00 37.74 4.20
3234 3429 2.435372 TATTTGTGCTAAGGCCAGGG 57.565 50.000 5.01 0.00 37.74 4.45
3235 3430 3.119137 GGTTTATTTGTGCTAAGGCCAGG 60.119 47.826 5.01 0.00 37.74 4.45
3236 3431 3.119137 GGGTTTATTTGTGCTAAGGCCAG 60.119 47.826 5.01 0.00 37.74 4.85
3237 3432 2.829120 GGGTTTATTTGTGCTAAGGCCA 59.171 45.455 5.01 0.00 37.74 5.36
3238 3433 2.159296 CGGGTTTATTTGTGCTAAGGCC 60.159 50.000 0.00 0.00 37.74 5.19
3239 3434 2.734175 GCGGGTTTATTTGTGCTAAGGC 60.734 50.000 0.00 0.00 39.26 4.35
3240 3435 2.490115 TGCGGGTTTATTTGTGCTAAGG 59.510 45.455 0.00 0.00 0.00 2.69
3241 3436 3.840890 TGCGGGTTTATTTGTGCTAAG 57.159 42.857 0.00 0.00 0.00 2.18
3242 3437 4.792521 AATGCGGGTTTATTTGTGCTAA 57.207 36.364 0.00 0.00 0.00 3.09
3243 3438 4.700692 TGTAATGCGGGTTTATTTGTGCTA 59.299 37.500 0.00 0.00 0.00 3.49
3244 3439 3.508012 TGTAATGCGGGTTTATTTGTGCT 59.492 39.130 0.00 0.00 0.00 4.40
3245 3440 3.610677 GTGTAATGCGGGTTTATTTGTGC 59.389 43.478 0.00 0.00 0.00 4.57
3246 3441 4.170256 GGTGTAATGCGGGTTTATTTGTG 58.830 43.478 0.00 0.00 0.00 3.33
3247 3442 3.827302 TGGTGTAATGCGGGTTTATTTGT 59.173 39.130 0.00 0.00 0.00 2.83
3248 3443 4.170256 GTGGTGTAATGCGGGTTTATTTG 58.830 43.478 0.00 0.00 0.00 2.32
3249 3444 3.193903 GGTGGTGTAATGCGGGTTTATTT 59.806 43.478 0.00 0.00 0.00 1.40
3250 3445 2.756207 GGTGGTGTAATGCGGGTTTATT 59.244 45.455 0.00 0.00 0.00 1.40
3251 3446 2.025699 AGGTGGTGTAATGCGGGTTTAT 60.026 45.455 0.00 0.00 0.00 1.40
3252 3447 1.351683 AGGTGGTGTAATGCGGGTTTA 59.648 47.619 0.00 0.00 0.00 2.01
3253 3448 0.111639 AGGTGGTGTAATGCGGGTTT 59.888 50.000 0.00 0.00 0.00 3.27
3254 3449 0.608035 CAGGTGGTGTAATGCGGGTT 60.608 55.000 0.00 0.00 0.00 4.11
3255 3450 1.002624 CAGGTGGTGTAATGCGGGT 60.003 57.895 0.00 0.00 0.00 5.28
3256 3451 0.744414 CTCAGGTGGTGTAATGCGGG 60.744 60.000 0.00 0.00 0.00 6.13
3257 3452 0.744414 CCTCAGGTGGTGTAATGCGG 60.744 60.000 0.00 0.00 0.00 5.69
3258 3453 0.036388 ACCTCAGGTGGTGTAATGCG 60.036 55.000 0.00 0.00 39.17 4.73
3259 3454 2.200373 AACCTCAGGTGGTGTAATGC 57.800 50.000 0.00 0.00 40.73 3.56
3260 3455 4.019681 TCCTAAACCTCAGGTGGTGTAATG 60.020 45.833 0.00 0.00 40.73 1.90
3261 3456 4.172807 TCCTAAACCTCAGGTGGTGTAAT 58.827 43.478 0.00 0.00 40.73 1.89
3262 3457 3.589641 TCCTAAACCTCAGGTGGTGTAA 58.410 45.455 0.00 0.00 40.73 2.41
3263 3458 3.263369 TCCTAAACCTCAGGTGGTGTA 57.737 47.619 0.00 0.00 40.73 2.90
3264 3459 2.112279 TCCTAAACCTCAGGTGGTGT 57.888 50.000 0.00 0.00 40.73 4.16
3265 3460 2.356125 CCATCCTAAACCTCAGGTGGTG 60.356 54.545 0.00 0.00 40.73 4.17
3266 3461 1.916181 CCATCCTAAACCTCAGGTGGT 59.084 52.381 0.00 0.00 43.11 4.16
3267 3462 2.171448 CTCCATCCTAAACCTCAGGTGG 59.829 54.545 0.00 0.00 35.34 4.61
3268 3463 2.840651 ACTCCATCCTAAACCTCAGGTG 59.159 50.000 0.00 0.00 35.34 4.00
3269 3464 2.840651 CACTCCATCCTAAACCTCAGGT 59.159 50.000 0.00 0.00 37.65 4.00
3270 3465 3.107601 TCACTCCATCCTAAACCTCAGG 58.892 50.000 0.00 0.00 34.20 3.86
3271 3466 3.772025 ACTCACTCCATCCTAAACCTCAG 59.228 47.826 0.00 0.00 0.00 3.35
3272 3467 3.791320 ACTCACTCCATCCTAAACCTCA 58.209 45.455 0.00 0.00 0.00 3.86
3273 3468 4.828072 AACTCACTCCATCCTAAACCTC 57.172 45.455 0.00 0.00 0.00 3.85
3274 3469 5.584551 AAAACTCACTCCATCCTAAACCT 57.415 39.130 0.00 0.00 0.00 3.50
3275 3470 6.594547 GTCTAAAACTCACTCCATCCTAAACC 59.405 42.308 0.00 0.00 0.00 3.27
3276 3471 6.310711 CGTCTAAAACTCACTCCATCCTAAAC 59.689 42.308 0.00 0.00 0.00 2.01
3277 3472 6.395629 CGTCTAAAACTCACTCCATCCTAAA 58.604 40.000 0.00 0.00 0.00 1.85
3278 3473 5.623824 GCGTCTAAAACTCACTCCATCCTAA 60.624 44.000 0.00 0.00 0.00 2.69
3279 3474 4.142227 GCGTCTAAAACTCACTCCATCCTA 60.142 45.833 0.00 0.00 0.00 2.94
3280 3475 3.368531 GCGTCTAAAACTCACTCCATCCT 60.369 47.826 0.00 0.00 0.00 3.24
3281 3476 2.930682 GCGTCTAAAACTCACTCCATCC 59.069 50.000 0.00 0.00 0.00 3.51
3282 3477 2.599082 CGCGTCTAAAACTCACTCCATC 59.401 50.000 0.00 0.00 0.00 3.51
3283 3478 2.230508 TCGCGTCTAAAACTCACTCCAT 59.769 45.455 5.77 0.00 0.00 3.41
3284 3479 1.610038 TCGCGTCTAAAACTCACTCCA 59.390 47.619 5.77 0.00 0.00 3.86
3285 3480 1.984297 GTCGCGTCTAAAACTCACTCC 59.016 52.381 5.77 0.00 0.00 3.85
3286 3481 1.984297 GGTCGCGTCTAAAACTCACTC 59.016 52.381 5.77 0.00 0.00 3.51
3287 3482 1.338973 TGGTCGCGTCTAAAACTCACT 59.661 47.619 5.77 0.00 0.00 3.41
3288 3483 1.719780 CTGGTCGCGTCTAAAACTCAC 59.280 52.381 5.77 0.00 0.00 3.51
3289 3484 1.338973 ACTGGTCGCGTCTAAAACTCA 59.661 47.619 5.77 0.00 0.00 3.41
3290 3485 1.719780 CACTGGTCGCGTCTAAAACTC 59.280 52.381 5.77 0.00 0.00 3.01
3291 3486 1.779569 CACTGGTCGCGTCTAAAACT 58.220 50.000 5.77 0.00 0.00 2.66
3292 3487 0.163146 GCACTGGTCGCGTCTAAAAC 59.837 55.000 5.77 0.00 0.00 2.43
3293 3488 0.947180 GGCACTGGTCGCGTCTAAAA 60.947 55.000 5.77 0.00 0.00 1.52
3294 3489 1.373748 GGCACTGGTCGCGTCTAAA 60.374 57.895 5.77 0.00 0.00 1.85
3295 3490 2.260434 GGCACTGGTCGCGTCTAA 59.740 61.111 5.77 0.00 0.00 2.10
3296 3491 4.111016 CGGCACTGGTCGCGTCTA 62.111 66.667 5.77 0.00 34.18 2.59
3313 3508 3.809374 GATCGTCCCCATGGTCGCC 62.809 68.421 11.73 4.74 42.02 5.54
3314 3509 2.280186 GATCGTCCCCATGGTCGC 60.280 66.667 11.73 0.00 42.02 5.19
3315 3510 2.027605 CGATCGTCCCCATGGTCG 59.972 66.667 11.73 12.39 43.37 4.79
3316 3511 2.280186 GCGATCGTCCCCATGGTC 60.280 66.667 17.81 0.00 0.00 4.02
3317 3512 3.861797 GGCGATCGTCCCCATGGT 61.862 66.667 17.81 0.00 0.00 3.55
3318 3513 4.969196 CGGCGATCGTCCCCATGG 62.969 72.222 15.14 4.14 0.00 3.66
3319 3514 4.969196 CCGGCGATCGTCCCCATG 62.969 72.222 15.14 0.00 37.11 3.66
3322 3517 4.587189 CTTCCGGCGATCGTCCCC 62.587 72.222 15.14 7.17 37.11 4.81
3323 3518 3.366739 AACTTCCGGCGATCGTCCC 62.367 63.158 15.14 7.96 37.11 4.46
3324 3519 1.877165 GAACTTCCGGCGATCGTCC 60.877 63.158 15.14 15.54 37.11 4.79
3325 3520 2.222217 CGAACTTCCGGCGATCGTC 61.222 63.158 17.81 14.29 37.11 4.20
3326 3521 2.202570 CGAACTTCCGGCGATCGT 60.203 61.111 17.81 0.00 37.11 3.73
3327 3522 1.515519 TTCGAACTTCCGGCGATCG 60.516 57.895 11.69 11.69 33.71 3.69
3328 3523 1.419107 GGTTCGAACTTCCGGCGATC 61.419 60.000 26.32 3.34 33.71 3.69
3329 3524 1.447314 GGTTCGAACTTCCGGCGAT 60.447 57.895 26.32 0.00 33.71 4.58
3330 3525 2.048877 GGTTCGAACTTCCGGCGA 60.049 61.111 26.32 0.00 0.00 5.54
3331 3526 3.475774 CGGTTCGAACTTCCGGCG 61.476 66.667 26.32 16.56 40.49 6.46
3334 3529 3.475774 CGCCGGTTCGAACTTCCG 61.476 66.667 26.32 21.09 43.30 4.30
3335 3530 3.116531 CCGCCGGTTCGAACTTCC 61.117 66.667 26.32 10.56 0.00 3.46
3336 3531 3.785499 GCCGCCGGTTCGAACTTC 61.785 66.667 26.32 14.67 0.00 3.01
3356 3551 3.688159 GCAGGGCCTTGTTGCTGG 61.688 66.667 17.25 0.00 35.05 4.85
3357 3552 2.913578 TGCAGGGCCTTGTTGCTG 60.914 61.111 17.25 8.39 38.60 4.41
3358 3553 2.599578 CTGCAGGGCCTTGTTGCT 60.600 61.111 17.25 0.00 38.60 3.91
3359 3554 3.688159 CCTGCAGGGCCTTGTTGC 61.688 66.667 26.14 14.68 38.30 4.17
3395 3590 3.986006 TGGACGACGACCAGTGCC 61.986 66.667 15.08 0.00 33.22 5.01
3396 3591 2.733593 GTGGACGACGACCAGTGC 60.734 66.667 19.26 4.57 38.14 4.40
3411 3606 4.175489 ACGATCCGCGACTCCGTG 62.175 66.667 8.23 0.00 44.57 4.94
3412 3607 4.175489 CACGATCCGCGACTCCGT 62.175 66.667 8.23 8.91 44.57 4.69
3413 3608 4.907034 CCACGATCCGCGACTCCG 62.907 72.222 8.23 8.20 44.57 4.63
3440 3635 4.323477 TCCTTGCCCCCGAACACG 62.323 66.667 0.00 0.00 0.00 4.49
3441 3636 2.671963 GTCCTTGCCCCCGAACAC 60.672 66.667 0.00 0.00 0.00 3.32
3442 3637 3.961414 GGTCCTTGCCCCCGAACA 61.961 66.667 0.00 0.00 0.00 3.18
3452 3647 2.594303 TTGCTGTGCCGGTCCTTG 60.594 61.111 1.90 0.00 0.00 3.61
3453 3648 2.281761 CTTGCTGTGCCGGTCCTT 60.282 61.111 1.90 0.00 0.00 3.36
3454 3649 4.335647 CCTTGCTGTGCCGGTCCT 62.336 66.667 1.90 0.00 0.00 3.85
3455 3650 4.643387 ACCTTGCTGTGCCGGTCC 62.643 66.667 1.90 0.00 27.80 4.46
3456 3651 3.357079 CACCTTGCTGTGCCGGTC 61.357 66.667 1.90 0.00 30.88 4.79
3457 3652 3.832237 CTCACCTTGCTGTGCCGGT 62.832 63.158 1.90 0.00 36.17 5.28
3458 3653 3.052082 CTCACCTTGCTGTGCCGG 61.052 66.667 0.00 0.00 36.17 6.13
3459 3654 3.730761 GCTCACCTTGCTGTGCCG 61.731 66.667 0.00 0.00 36.17 5.69
3460 3655 2.595463 TGCTCACCTTGCTGTGCC 60.595 61.111 0.00 0.00 36.17 5.01
3461 3656 0.603707 TAGTGCTCACCTTGCTGTGC 60.604 55.000 0.00 0.00 36.17 4.57
3462 3657 1.436600 CTAGTGCTCACCTTGCTGTG 58.563 55.000 0.00 0.00 37.59 3.66
3463 3658 0.321122 GCTAGTGCTCACCTTGCTGT 60.321 55.000 0.00 0.00 36.03 4.40
3464 3659 1.357258 CGCTAGTGCTCACCTTGCTG 61.357 60.000 0.00 0.00 36.97 4.41
3465 3660 1.079543 CGCTAGTGCTCACCTTGCT 60.080 57.895 0.00 0.00 36.97 3.91
3466 3661 2.103042 CCGCTAGTGCTCACCTTGC 61.103 63.158 0.00 0.00 36.97 4.01
3467 3662 0.459237 CTCCGCTAGTGCTCACCTTG 60.459 60.000 0.00 0.00 36.97 3.61
3468 3663 1.893786 CTCCGCTAGTGCTCACCTT 59.106 57.895 0.00 0.00 36.97 3.50
3469 3664 2.716017 GCTCCGCTAGTGCTCACCT 61.716 63.158 0.00 0.00 36.97 4.00
3470 3665 2.202810 GCTCCGCTAGTGCTCACC 60.203 66.667 0.00 0.00 36.97 4.02
3471 3666 0.804156 GAAGCTCCGCTAGTGCTCAC 60.804 60.000 0.00 0.00 44.42 3.51
3472 3667 1.513158 GAAGCTCCGCTAGTGCTCA 59.487 57.895 0.00 0.00 44.42 4.26
3473 3668 1.587613 CGAAGCTCCGCTAGTGCTC 60.588 63.158 0.00 0.00 44.42 4.26
3480 3675 4.767255 CCTTGCCGAAGCTCCGCT 62.767 66.667 0.00 0.00 42.56 5.52
3587 5078 2.176055 CGTACGACTCTGCTGCGT 59.824 61.111 10.44 0.00 41.58 5.24
3618 5109 2.527951 GAACCCTGAGCCTGCATCGT 62.528 60.000 0.00 0.00 0.00 3.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.