Multiple sequence alignment - TraesCS2A01G526800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G526800 chr2A 100.000 4049 0 0 1 4049 746842869 746838821 0.000000e+00 7478.0
1 TraesCS2A01G526800 chr2A 84.086 1395 151 44 2010 3358 755060659 755062028 0.000000e+00 1280.0
2 TraesCS2A01G526800 chr2A 87.436 390 21 6 1 370 145202300 145202681 1.350000e-114 424.0
3 TraesCS2A01G526800 chr2A 89.535 172 18 0 1790 1961 755060170 755060341 6.810000e-53 219.0
4 TraesCS2A01G526800 chr2A 88.679 159 15 1 1983 2138 755060497 755060655 1.490000e-44 191.0
5 TraesCS2A01G526800 chr2A 87.234 141 11 4 2851 2991 754709033 754708900 1.950000e-33 154.0
6 TraesCS2A01G526800 chr2A 85.470 117 12 4 3379 3492 515963324 515963210 2.560000e-22 117.0
7 TraesCS2A01G526800 chr2D 90.648 3208 142 47 741 3881 616628150 616625034 0.000000e+00 4117.0
8 TraesCS2A01G526800 chr2D 81.841 1977 200 85 2003 3881 623790993 623792908 0.000000e+00 1515.0
9 TraesCS2A01G526800 chr2D 86.775 431 42 8 2563 2992 623793672 623794088 2.200000e-127 466.0
10 TraesCS2A01G526800 chr2D 80.545 550 93 13 2250 2788 623497885 623497339 1.050000e-110 411.0
11 TraesCS2A01G526800 chr2D 80.792 505 49 16 1662 2142 623790518 623790998 6.440000e-93 351.0
12 TraesCS2A01G526800 chr2D 90.955 199 14 1 367 561 616628383 616628185 8.630000e-67 265.0
13 TraesCS2A01G526800 chr2D 82.906 117 13 5 3380 3491 45330481 45330595 9.260000e-17 99.0
14 TraesCS2A01G526800 chr2D 100.000 28 0 0 673 700 633377319 633377292 7.000000e-03 52.8
15 TraesCS2A01G526800 chr2B 91.478 2781 133 50 741 3462 751605254 751602519 0.000000e+00 3727.0
16 TraesCS2A01G526800 chr2B 83.893 1341 150 44 2003 3297 765561884 765563204 0.000000e+00 1219.0
17 TraesCS2A01G526800 chr2B 84.072 609 63 10 2198 2788 110520863 110520271 1.270000e-154 556.0
18 TraesCS2A01G526800 chr2B 87.586 435 39 6 3452 3881 751588776 751588352 1.310000e-134 490.0
19 TraesCS2A01G526800 chr2B 90.604 149 14 0 2010 2158 765561757 765561905 8.880000e-47 198.0
20 TraesCS2A01G526800 chr2B 87.234 141 11 4 2851 2991 765486890 765486757 1.950000e-33 154.0
21 TraesCS2A01G526800 chr2B 91.743 109 9 0 437 545 751605428 751605320 7.010000e-33 152.0
22 TraesCS2A01G526800 chr2B 82.456 114 9 7 377 486 751605520 751605414 5.570000e-14 89.8
23 TraesCS2A01G526800 chr7D 83.541 1124 100 49 2010 3086 534655372 534654287 0.000000e+00 972.0
24 TraesCS2A01G526800 chr7D 90.164 183 15 3 3176 3358 534653734 534653555 6.770000e-58 235.0
25 TraesCS2A01G526800 chr7D 88.957 163 15 1 1983 2142 534655534 534655372 8.880000e-47 198.0
26 TraesCS2A01G526800 chr7D 83.810 105 11 5 3385 3485 479411315 479411213 1.200000e-15 95.3
27 TraesCS2A01G526800 chr7A 93.261 371 22 1 1 368 586654193 586654563 9.900000e-151 544.0
28 TraesCS2A01G526800 chr7A 90.625 384 29 4 1 381 648685170 648684791 1.680000e-138 503.0
29 TraesCS2A01G526800 chr7A 82.787 122 9 10 3376 3491 549873354 549873239 9.260000e-17 99.0
30 TraesCS2A01G526800 chr6A 89.175 388 22 4 1 368 57658100 57658487 2.200000e-127 466.0
31 TraesCS2A01G526800 chr1B 89.037 374 35 4 1 368 532164098 532164471 3.690000e-125 459.0
32 TraesCS2A01G526800 chr5A 88.441 372 37 4 1 368 524032719 524033088 1.030000e-120 444.0
33 TraesCS2A01G526800 chr5A 87.918 389 26 2 1 368 375570440 375570828 4.800000e-119 438.0
34 TraesCS2A01G526800 chr5A 87.158 366 25 3 1 344 651995927 651996292 2.930000e-106 396.0
35 TraesCS2A01G526800 chr1A 87.692 390 26 2 4 371 325054658 325055047 6.220000e-118 435.0
36 TraesCS2A01G526800 chr1A 86.897 290 16 2 104 371 325055605 325055894 5.080000e-79 305.0
37 TraesCS2A01G526800 chr7B 87.468 391 28 2 1 370 130514214 130513824 8.040000e-117 431.0
38 TraesCS2A01G526800 chr4B 86.869 396 31 13 1 375 646957892 646957497 1.350000e-114 424.0
39 TraesCS2A01G526800 chr3A 87.397 365 24 3 1 344 27676576 27676939 2.270000e-107 399.0
40 TraesCS2A01G526800 chr4D 85.981 107 6 6 3393 3491 121270309 121270204 5.530000e-19 106.0
41 TraesCS2A01G526800 chr1D 82.114 123 10 10 3376 3491 195003836 195003953 1.200000e-15 95.3
42 TraesCS2A01G526800 chr4A 80.672 119 16 5 3377 3491 560091967 560091852 7.210000e-13 86.1
43 TraesCS2A01G526800 chr5D 90.385 52 5 0 3825 3876 441793455 441793506 7.260000e-08 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G526800 chr2A 746838821 746842869 4048 True 7478.000000 7478 100.000000 1 4049 1 chr2A.!!$R2 4048
1 TraesCS2A01G526800 chr2A 755060170 755062028 1858 False 563.333333 1280 87.433333 1790 3358 3 chr2A.!!$F2 1568
2 TraesCS2A01G526800 chr2D 616625034 616628383 3349 True 2191.000000 4117 90.801500 367 3881 2 chr2D.!!$R3 3514
3 TraesCS2A01G526800 chr2D 623790518 623794088 3570 False 777.333333 1515 83.136000 1662 3881 3 chr2D.!!$F2 2219
4 TraesCS2A01G526800 chr2D 623497339 623497885 546 True 411.000000 411 80.545000 2250 2788 1 chr2D.!!$R1 538
5 TraesCS2A01G526800 chr2B 751602519 751605520 3001 True 1322.933333 3727 88.559000 377 3462 3 chr2B.!!$R4 3085
6 TraesCS2A01G526800 chr2B 765561757 765563204 1447 False 708.500000 1219 87.248500 2003 3297 2 chr2B.!!$F1 1294
7 TraesCS2A01G526800 chr2B 110520271 110520863 592 True 556.000000 556 84.072000 2198 2788 1 chr2B.!!$R1 590
8 TraesCS2A01G526800 chr7D 534653555 534655534 1979 True 468.333333 972 87.554000 1983 3358 3 chr7D.!!$R2 1375
9 TraesCS2A01G526800 chr1A 325054658 325055894 1236 False 370.000000 435 87.294500 4 371 2 chr1A.!!$F1 367

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
227 228 0.107081 ACAACGTCGTTCATGGGGAA 59.893 50.0 7.86 0.00 0.00 3.97 F
562 605 0.109504 GCCGCCATAACGCAAAAAGA 60.110 50.0 0.00 0.00 0.00 2.52 F
2111 2465 0.036952 CCCATGACTTGTGCTCGAGT 60.037 55.0 15.13 8.41 40.65 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1489 1556 0.179032 TGGGCAAGTTTTGAGCTCGA 60.179 50.0 9.64 3.88 0.0 4.04 R
2504 2888 0.253044 GCAGTACATCCTCTTGGCCA 59.747 55.0 0.00 0.00 0.0 5.36 R
4001 5733 0.101399 AGATCGGACGCTCACATGAC 59.899 55.0 0.00 0.00 0.0 3.06 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 7.547697 CCCTTAACCCTTAAATCCTCAAAAA 57.452 36.000 0.00 0.00 0.00 1.94
68 69 5.552430 AACCCTCTCCCAATCCTTAAAAT 57.448 39.130 0.00 0.00 0.00 1.82
102 103 2.160205 GCAAAACCTACCTCAACCCTC 58.840 52.381 0.00 0.00 0.00 4.30
105 106 4.407365 CAAAACCTACCTCAACCCTCATT 58.593 43.478 0.00 0.00 0.00 2.57
106 107 4.741928 AAACCTACCTCAACCCTCATTT 57.258 40.909 0.00 0.00 0.00 2.32
107 108 3.721087 ACCTACCTCAACCCTCATTTG 57.279 47.619 0.00 0.00 0.00 2.32
108 109 2.308866 ACCTACCTCAACCCTCATTTGG 59.691 50.000 0.00 0.00 0.00 3.28
109 110 2.369394 CTACCTCAACCCTCATTTGGC 58.631 52.381 0.00 0.00 0.00 4.52
110 111 0.609131 ACCTCAACCCTCATTTGGCG 60.609 55.000 0.00 0.00 0.00 5.69
111 112 1.315257 CCTCAACCCTCATTTGGCGG 61.315 60.000 0.00 0.00 0.00 6.13
112 113 0.609131 CTCAACCCTCATTTGGCGGT 60.609 55.000 0.00 0.00 0.00 5.68
113 114 0.178975 TCAACCCTCATTTGGCGGTT 60.179 50.000 0.00 0.00 39.18 4.44
114 115 1.074084 TCAACCCTCATTTGGCGGTTA 59.926 47.619 0.00 0.00 36.45 2.85
115 116 2.099405 CAACCCTCATTTGGCGGTTAT 58.901 47.619 0.00 0.00 36.45 1.89
116 117 3.054287 TCAACCCTCATTTGGCGGTTATA 60.054 43.478 0.00 0.00 36.45 0.98
117 118 2.927028 ACCCTCATTTGGCGGTTATAC 58.073 47.619 0.00 0.00 0.00 1.47
118 119 2.508300 ACCCTCATTTGGCGGTTATACT 59.492 45.455 0.00 0.00 0.00 2.12
119 120 3.139077 CCCTCATTTGGCGGTTATACTC 58.861 50.000 0.00 0.00 0.00 2.59
120 121 2.800544 CCTCATTTGGCGGTTATACTCG 59.199 50.000 0.00 0.00 0.00 4.18
125 126 3.392440 GCGGTTATACTCGCGCGG 61.392 66.667 31.69 22.52 42.48 6.46
126 127 2.728383 CGGTTATACTCGCGCGGG 60.728 66.667 31.23 31.23 0.00 6.13
127 128 2.723746 GGTTATACTCGCGCGGGA 59.276 61.111 39.76 25.06 0.00 5.14
128 129 1.371389 GGTTATACTCGCGCGGGAG 60.371 63.158 40.95 40.95 39.97 4.30
129 130 1.371389 GTTATACTCGCGCGGGAGG 60.371 63.158 43.26 29.96 38.39 4.30
130 131 1.526686 TTATACTCGCGCGGGAGGA 60.527 57.895 43.26 40.12 38.39 3.71
131 132 1.102809 TTATACTCGCGCGGGAGGAA 61.103 55.000 43.26 34.13 38.39 3.36
132 133 1.102809 TATACTCGCGCGGGAGGAAA 61.103 55.000 43.26 32.07 38.39 3.13
133 134 1.952102 ATACTCGCGCGGGAGGAAAA 61.952 55.000 43.26 30.03 38.39 2.29
134 135 2.157305 TACTCGCGCGGGAGGAAAAA 62.157 55.000 43.26 26.19 38.39 1.94
151 152 1.545841 AAAATTCTCCCAACTCCCGC 58.454 50.000 0.00 0.00 0.00 6.13
152 153 0.676782 AAATTCTCCCAACTCCCGCG 60.677 55.000 0.00 0.00 0.00 6.46
153 154 1.838073 AATTCTCCCAACTCCCGCGT 61.838 55.000 4.92 0.00 0.00 6.01
154 155 2.240162 ATTCTCCCAACTCCCGCGTC 62.240 60.000 4.92 0.00 0.00 5.19
155 156 3.691342 CTCCCAACTCCCGCGTCA 61.691 66.667 4.92 0.00 0.00 4.35
156 157 3.234630 CTCCCAACTCCCGCGTCAA 62.235 63.158 4.92 0.00 0.00 3.18
157 158 3.047877 CCCAACTCCCGCGTCAAC 61.048 66.667 4.92 0.00 0.00 3.18
158 159 3.411351 CCAACTCCCGCGTCAACG 61.411 66.667 4.92 0.00 43.27 4.10
189 190 4.208686 CTGCTAGTCGCCCCCGTC 62.209 72.222 0.00 0.00 38.05 4.79
225 226 2.159181 GACAACGTCGTTCATGGGG 58.841 57.895 7.86 0.00 0.00 4.96
226 227 0.320073 GACAACGTCGTTCATGGGGA 60.320 55.000 7.86 0.00 0.00 4.81
227 228 0.107081 ACAACGTCGTTCATGGGGAA 59.893 50.000 7.86 0.00 0.00 3.97
228 229 1.271163 ACAACGTCGTTCATGGGGAAT 60.271 47.619 7.86 0.00 37.93 3.01
229 230 2.027929 ACAACGTCGTTCATGGGGAATA 60.028 45.455 7.86 0.00 37.93 1.75
230 231 3.202906 CAACGTCGTTCATGGGGAATAT 58.797 45.455 7.86 0.00 37.93 1.28
231 232 3.553828 ACGTCGTTCATGGGGAATATT 57.446 42.857 0.00 0.00 37.93 1.28
232 233 3.463944 ACGTCGTTCATGGGGAATATTC 58.536 45.455 6.93 6.93 37.93 1.75
233 234 2.806244 CGTCGTTCATGGGGAATATTCC 59.194 50.000 24.14 24.14 46.82 3.01
249 250 8.631480 GGAATATTCCGTTATAAGAATTGGGT 57.369 34.615 18.61 0.00 37.65 4.51
250 251 9.074576 GGAATATTCCGTTATAAGAATTGGGTT 57.925 33.333 18.61 0.00 37.65 4.11
253 254 7.948034 ATTCCGTTATAAGAATTGGGTTTGA 57.052 32.000 0.00 0.00 28.19 2.69
254 255 6.995511 TCCGTTATAAGAATTGGGTTTGAG 57.004 37.500 0.00 0.00 0.00 3.02
255 256 5.883673 TCCGTTATAAGAATTGGGTTTGAGG 59.116 40.000 0.00 0.00 0.00 3.86
256 257 5.883673 CCGTTATAAGAATTGGGTTTGAGGA 59.116 40.000 0.00 0.00 0.00 3.71
257 258 6.546034 CCGTTATAAGAATTGGGTTTGAGGAT 59.454 38.462 0.00 0.00 0.00 3.24
258 259 7.068226 CCGTTATAAGAATTGGGTTTGAGGATT 59.932 37.037 0.00 0.00 0.00 3.01
259 260 8.129211 CGTTATAAGAATTGGGTTTGAGGATTC 58.871 37.037 0.00 0.00 0.00 2.52
260 261 9.190317 GTTATAAGAATTGGGTTTGAGGATTCT 57.810 33.333 0.00 0.00 38.36 2.40
263 264 9.942526 ATAAGAATTGGGTTTGAGGATTCTAAT 57.057 29.630 0.00 0.00 36.38 1.73
264 265 7.888250 AGAATTGGGTTTGAGGATTCTAATC 57.112 36.000 0.00 0.00 35.82 1.75
265 266 7.646884 AGAATTGGGTTTGAGGATTCTAATCT 58.353 34.615 2.91 0.00 35.82 2.40
266 267 8.118600 AGAATTGGGTTTGAGGATTCTAATCTT 58.881 33.333 2.91 0.00 35.82 2.40
267 268 8.670521 AATTGGGTTTGAGGATTCTAATCTTT 57.329 30.769 2.91 0.00 35.73 2.52
268 269 7.466746 TTGGGTTTGAGGATTCTAATCTTTG 57.533 36.000 2.91 0.00 35.73 2.77
269 270 5.418840 TGGGTTTGAGGATTCTAATCTTTGC 59.581 40.000 2.91 0.00 35.73 3.68
270 271 5.163509 GGGTTTGAGGATTCTAATCTTTGCC 60.164 44.000 2.91 0.00 35.73 4.52
271 272 5.163509 GGTTTGAGGATTCTAATCTTTGCCC 60.164 44.000 2.91 0.00 35.73 5.36
272 273 4.170468 TGAGGATTCTAATCTTTGCCCC 57.830 45.455 2.91 0.00 35.73 5.80
273 274 3.788142 TGAGGATTCTAATCTTTGCCCCT 59.212 43.478 2.91 0.00 35.73 4.79
274 275 4.140536 GAGGATTCTAATCTTTGCCCCTG 58.859 47.826 2.91 0.00 35.73 4.45
275 276 3.529319 AGGATTCTAATCTTTGCCCCTGT 59.471 43.478 2.91 0.00 35.73 4.00
276 277 4.017130 AGGATTCTAATCTTTGCCCCTGTT 60.017 41.667 2.91 0.00 35.73 3.16
277 278 4.711846 GGATTCTAATCTTTGCCCCTGTTT 59.288 41.667 2.91 0.00 35.73 2.83
278 279 5.187772 GGATTCTAATCTTTGCCCCTGTTTT 59.812 40.000 2.91 0.00 35.73 2.43
279 280 6.295859 GGATTCTAATCTTTGCCCCTGTTTTT 60.296 38.462 2.91 0.00 35.73 1.94
280 281 5.722021 TCTAATCTTTGCCCCTGTTTTTC 57.278 39.130 0.00 0.00 0.00 2.29
281 282 5.144100 TCTAATCTTTGCCCCTGTTTTTCA 58.856 37.500 0.00 0.00 0.00 2.69
282 283 4.769345 AATCTTTGCCCCTGTTTTTCAA 57.231 36.364 0.00 0.00 0.00 2.69
283 284 3.535280 TCTTTGCCCCTGTTTTTCAAC 57.465 42.857 0.00 0.00 0.00 3.18
284 285 2.834549 TCTTTGCCCCTGTTTTTCAACA 59.165 40.909 0.00 0.00 40.82 3.33
285 286 2.682155 TTGCCCCTGTTTTTCAACAC 57.318 45.000 0.00 0.00 38.03 3.32
286 287 0.457851 TGCCCCTGTTTTTCAACACG 59.542 50.000 0.00 0.00 38.03 4.49
287 288 0.458260 GCCCCTGTTTTTCAACACGT 59.542 50.000 0.00 0.00 38.03 4.49
288 289 1.677052 GCCCCTGTTTTTCAACACGTA 59.323 47.619 0.00 0.00 38.03 3.57
289 290 2.099427 GCCCCTGTTTTTCAACACGTAA 59.901 45.455 0.00 0.00 38.03 3.18
290 291 3.429135 GCCCCTGTTTTTCAACACGTAAA 60.429 43.478 0.00 0.00 38.03 2.01
291 292 4.745649 CCCCTGTTTTTCAACACGTAAAA 58.254 39.130 0.00 0.00 38.03 1.52
292 293 4.801516 CCCCTGTTTTTCAACACGTAAAAG 59.198 41.667 0.00 0.00 38.03 2.27
293 294 5.404096 CCCTGTTTTTCAACACGTAAAAGT 58.596 37.500 0.00 0.00 38.03 2.66
294 295 5.287513 CCCTGTTTTTCAACACGTAAAAGTG 59.712 40.000 0.00 0.00 46.83 3.16
295 296 5.220135 CCTGTTTTTCAACACGTAAAAGTGC 60.220 40.000 0.00 0.00 45.45 4.40
296 297 5.220381 TGTTTTTCAACACGTAAAAGTGCA 58.780 33.333 0.00 0.00 45.45 4.57
297 298 5.864474 TGTTTTTCAACACGTAAAAGTGCAT 59.136 32.000 0.00 0.00 45.45 3.96
298 299 7.027760 TGTTTTTCAACACGTAAAAGTGCATA 58.972 30.769 0.00 0.00 45.45 3.14
299 300 7.541091 TGTTTTTCAACACGTAAAAGTGCATAA 59.459 29.630 0.00 0.00 45.45 1.90
300 301 8.373992 GTTTTTCAACACGTAAAAGTGCATAAA 58.626 29.630 0.00 0.00 45.45 1.40
301 302 8.462143 TTTTCAACACGTAAAAGTGCATAAAA 57.538 26.923 0.00 0.02 45.45 1.52
302 303 8.635877 TTTCAACACGTAAAAGTGCATAAAAT 57.364 26.923 0.00 0.00 45.45 1.82
303 304 7.845617 TCAACACGTAAAAGTGCATAAAATC 57.154 32.000 0.00 0.00 45.45 2.17
304 305 7.418408 TCAACACGTAAAAGTGCATAAAATCA 58.582 30.769 0.00 0.00 45.45 2.57
305 306 8.079203 TCAACACGTAAAAGTGCATAAAATCAT 58.921 29.630 0.00 0.00 45.45 2.45
306 307 8.698854 CAACACGTAAAAGTGCATAAAATCATT 58.301 29.630 0.00 0.00 45.45 2.57
307 308 8.810652 ACACGTAAAAGTGCATAAAATCATTT 57.189 26.923 0.00 0.00 45.45 2.32
308 309 9.255304 ACACGTAAAAGTGCATAAAATCATTTT 57.745 25.926 0.02 0.02 45.45 1.82
314 315 9.949174 AAAAGTGCATAAAATCATTTTTGAACC 57.051 25.926 0.00 0.00 36.96 3.62
315 316 7.671495 AGTGCATAAAATCATTTTTGAACCC 57.329 32.000 0.00 0.00 36.96 4.11
316 317 7.452562 AGTGCATAAAATCATTTTTGAACCCT 58.547 30.769 0.00 0.00 36.96 4.34
317 318 7.938490 AGTGCATAAAATCATTTTTGAACCCTT 59.062 29.630 0.00 0.00 36.96 3.95
318 319 9.213799 GTGCATAAAATCATTTTTGAACCCTTA 57.786 29.630 0.00 0.00 35.82 2.69
319 320 9.784531 TGCATAAAATCATTTTTGAACCCTTAA 57.215 25.926 0.00 0.00 35.82 1.85
324 325 6.779115 ATCATTTTTGAACCCTTAAAACGC 57.221 33.333 0.00 0.00 0.00 4.84
325 326 5.908341 TCATTTTTGAACCCTTAAAACGCT 58.092 33.333 0.00 0.00 0.00 5.07
326 327 7.040473 TCATTTTTGAACCCTTAAAACGCTA 57.960 32.000 0.00 0.00 0.00 4.26
327 328 7.142680 TCATTTTTGAACCCTTAAAACGCTAG 58.857 34.615 0.00 0.00 0.00 3.42
328 329 6.453926 TTTTTGAACCCTTAAAACGCTAGT 57.546 33.333 0.00 0.00 0.00 2.57
329 330 7.565323 TTTTTGAACCCTTAAAACGCTAGTA 57.435 32.000 0.00 0.00 0.00 1.82
330 331 7.565323 TTTTGAACCCTTAAAACGCTAGTAA 57.435 32.000 0.00 0.00 0.00 2.24
331 332 7.565323 TTTGAACCCTTAAAACGCTAGTAAA 57.435 32.000 0.00 0.00 0.00 2.01
332 333 6.790285 TGAACCCTTAAAACGCTAGTAAAG 57.210 37.500 0.00 0.00 0.00 1.85
333 334 6.523840 TGAACCCTTAAAACGCTAGTAAAGA 58.476 36.000 0.00 0.00 0.00 2.52
334 335 7.163441 TGAACCCTTAAAACGCTAGTAAAGAT 58.837 34.615 0.00 0.00 0.00 2.40
335 336 7.662669 TGAACCCTTAAAACGCTAGTAAAGATT 59.337 33.333 0.00 0.00 0.00 2.40
336 337 7.991084 ACCCTTAAAACGCTAGTAAAGATTT 57.009 32.000 0.00 0.00 0.00 2.17
337 338 7.813645 ACCCTTAAAACGCTAGTAAAGATTTG 58.186 34.615 0.00 0.00 0.00 2.32
338 339 7.662669 ACCCTTAAAACGCTAGTAAAGATTTGA 59.337 33.333 0.00 0.00 0.00 2.69
339 340 8.175716 CCCTTAAAACGCTAGTAAAGATTTGAG 58.824 37.037 0.00 0.00 0.00 3.02
340 341 8.175716 CCTTAAAACGCTAGTAAAGATTTGAGG 58.824 37.037 0.00 1.34 31.05 3.86
341 342 6.496338 AAAACGCTAGTAAAGATTTGAGGG 57.504 37.500 0.00 0.00 0.00 4.30
342 343 4.820894 ACGCTAGTAAAGATTTGAGGGT 57.179 40.909 0.00 0.00 0.00 4.34
343 344 5.161943 ACGCTAGTAAAGATTTGAGGGTT 57.838 39.130 0.00 0.00 0.00 4.11
344 345 4.935808 ACGCTAGTAAAGATTTGAGGGTTG 59.064 41.667 0.00 0.00 0.00 3.77
345 346 5.175859 CGCTAGTAAAGATTTGAGGGTTGA 58.824 41.667 0.00 0.00 0.00 3.18
346 347 5.642063 CGCTAGTAAAGATTTGAGGGTTGAA 59.358 40.000 0.00 0.00 0.00 2.69
347 348 6.183360 CGCTAGTAAAGATTTGAGGGTTGAAG 60.183 42.308 0.00 0.00 0.00 3.02
348 349 6.094186 GCTAGTAAAGATTTGAGGGTTGAAGG 59.906 42.308 0.00 0.00 0.00 3.46
349 350 5.325239 AGTAAAGATTTGAGGGTTGAAGGG 58.675 41.667 0.00 0.00 0.00 3.95
350 351 3.903530 AAGATTTGAGGGTTGAAGGGT 57.096 42.857 0.00 0.00 0.00 4.34
351 352 3.903530 AGATTTGAGGGTTGAAGGGTT 57.096 42.857 0.00 0.00 0.00 4.11
352 353 3.767711 AGATTTGAGGGTTGAAGGGTTC 58.232 45.455 0.00 0.00 0.00 3.62
353 354 3.399305 AGATTTGAGGGTTGAAGGGTTCT 59.601 43.478 0.00 0.00 0.00 3.01
354 355 4.601857 AGATTTGAGGGTTGAAGGGTTCTA 59.398 41.667 0.00 0.00 0.00 2.10
355 356 3.782656 TTGAGGGTTGAAGGGTTCTAC 57.217 47.619 0.00 0.00 35.18 2.59
356 357 2.986050 TGAGGGTTGAAGGGTTCTACT 58.014 47.619 2.15 0.00 36.02 2.57
357 358 4.136341 TGAGGGTTGAAGGGTTCTACTA 57.864 45.455 2.15 0.00 36.02 1.82
358 359 4.495565 TGAGGGTTGAAGGGTTCTACTAA 58.504 43.478 2.15 0.00 36.02 2.24
359 360 5.098663 TGAGGGTTGAAGGGTTCTACTAAT 58.901 41.667 2.15 0.00 36.02 1.73
360 361 6.266080 TGAGGGTTGAAGGGTTCTACTAATA 58.734 40.000 2.15 0.00 36.02 0.98
361 362 6.731919 TGAGGGTTGAAGGGTTCTACTAATAA 59.268 38.462 2.15 0.00 36.02 1.40
362 363 7.404980 TGAGGGTTGAAGGGTTCTACTAATAAT 59.595 37.037 2.15 0.00 36.02 1.28
363 364 7.574607 AGGGTTGAAGGGTTCTACTAATAATG 58.425 38.462 2.15 0.00 36.02 1.90
364 365 6.262496 GGGTTGAAGGGTTCTACTAATAATGC 59.738 42.308 2.15 0.00 36.02 3.56
365 366 7.054751 GGTTGAAGGGTTCTACTAATAATGCT 58.945 38.462 2.15 0.00 36.02 3.79
385 386 0.251354 CTAAGCTCAGCTTCCAGCCA 59.749 55.000 17.33 0.00 46.77 4.75
424 429 2.709475 GCATAGCCGCGAAACCAG 59.291 61.111 8.23 0.00 0.00 4.00
441 474 4.267349 ACCAGTTAGCAACAACGTAGAT 57.733 40.909 0.00 0.00 33.50 1.98
447 480 9.856488 CCAGTTAGCAACAACGTAGATATATAT 57.144 33.333 0.00 0.00 33.50 0.86
533 570 3.934068 ACCGAAATACCTCACGTTTGAT 58.066 40.909 0.00 0.00 0.00 2.57
538 575 5.064707 CGAAATACCTCACGTTTGATCCATT 59.935 40.000 0.00 0.00 0.00 3.16
546 583 2.095263 ACGTTTGATCCATTTTCTGCCG 60.095 45.455 0.00 0.00 0.00 5.69
561 604 0.387878 TGCCGCCATAACGCAAAAAG 60.388 50.000 0.00 0.00 0.00 2.27
562 605 0.109504 GCCGCCATAACGCAAAAAGA 60.110 50.000 0.00 0.00 0.00 2.52
563 606 1.469079 GCCGCCATAACGCAAAAAGAT 60.469 47.619 0.00 0.00 0.00 2.40
564 607 2.184448 CCGCCATAACGCAAAAAGATG 58.816 47.619 0.00 0.00 0.00 2.90
566 609 3.181505 CCGCCATAACGCAAAAAGATGTA 60.182 43.478 0.00 0.00 0.00 2.29
567 610 4.028383 CGCCATAACGCAAAAAGATGTAG 58.972 43.478 0.00 0.00 0.00 2.74
568 611 3.791353 GCCATAACGCAAAAAGATGTAGC 59.209 43.478 0.00 0.00 0.00 3.58
569 612 4.438744 GCCATAACGCAAAAAGATGTAGCT 60.439 41.667 0.00 0.00 0.00 3.32
570 613 5.220777 GCCATAACGCAAAAAGATGTAGCTA 60.221 40.000 0.00 0.00 0.00 3.32
571 614 6.422223 CCATAACGCAAAAAGATGTAGCTAG 58.578 40.000 0.00 0.00 0.00 3.42
572 615 4.946784 AACGCAAAAAGATGTAGCTAGG 57.053 40.909 0.00 0.00 0.00 3.02
573 616 3.939066 ACGCAAAAAGATGTAGCTAGGT 58.061 40.909 0.00 0.00 0.00 3.08
574 617 3.933332 ACGCAAAAAGATGTAGCTAGGTC 59.067 43.478 0.00 0.00 0.00 3.85
575 618 4.184629 CGCAAAAAGATGTAGCTAGGTCT 58.815 43.478 0.00 0.00 0.00 3.85
576 619 5.105473 ACGCAAAAAGATGTAGCTAGGTCTA 60.105 40.000 0.00 0.00 0.00 2.59
578 621 6.144724 CGCAAAAAGATGTAGCTAGGTCTATC 59.855 42.308 0.00 4.02 0.00 2.08
579 622 6.144724 GCAAAAAGATGTAGCTAGGTCTATCG 59.855 42.308 0.00 0.00 0.00 2.92
580 623 7.426410 CAAAAAGATGTAGCTAGGTCTATCGA 58.574 38.462 0.00 0.00 0.00 3.59
581 624 6.563222 AAAGATGTAGCTAGGTCTATCGAC 57.437 41.667 0.00 0.00 39.49 4.20
582 625 5.492855 AGATGTAGCTAGGTCTATCGACT 57.507 43.478 0.00 0.00 40.10 4.18
583 626 5.242434 AGATGTAGCTAGGTCTATCGACTG 58.758 45.833 0.00 0.00 40.10 3.51
585 628 4.633175 TGTAGCTAGGTCTATCGACTGAG 58.367 47.826 0.00 0.00 40.10 3.35
586 629 4.344390 TGTAGCTAGGTCTATCGACTGAGA 59.656 45.833 0.00 0.00 40.10 3.27
587 630 4.634012 AGCTAGGTCTATCGACTGAGAT 57.366 45.455 0.00 0.00 40.10 2.75
588 631 5.748670 AGCTAGGTCTATCGACTGAGATA 57.251 43.478 0.00 0.00 40.10 1.98
589 632 6.116711 AGCTAGGTCTATCGACTGAGATAA 57.883 41.667 0.00 0.00 40.10 1.75
590 633 6.535540 AGCTAGGTCTATCGACTGAGATAAA 58.464 40.000 0.00 0.00 40.10 1.40
591 634 7.172342 AGCTAGGTCTATCGACTGAGATAAAT 58.828 38.462 0.00 0.00 40.10 1.40
592 635 7.668052 AGCTAGGTCTATCGACTGAGATAAATT 59.332 37.037 0.00 0.00 40.10 1.82
593 636 8.948145 GCTAGGTCTATCGACTGAGATAAATTA 58.052 37.037 0.00 0.00 40.10 1.40
596 639 9.357161 AGGTCTATCGACTGAGATAAATTAAGT 57.643 33.333 0.00 0.00 40.10 2.24
597 640 9.615295 GGTCTATCGACTGAGATAAATTAAGTC 57.385 37.037 0.00 0.00 40.10 3.01
677 720 9.797642 TTATACGGACCTTAATGTAGTATCTCA 57.202 33.333 11.79 0.00 0.00 3.27
678 721 6.388435 ACGGACCTTAATGTAGTATCTCAC 57.612 41.667 0.00 0.00 0.00 3.51
679 722 5.008415 ACGGACCTTAATGTAGTATCTCACG 59.992 44.000 0.00 0.00 0.00 4.35
680 723 5.237996 CGGACCTTAATGTAGTATCTCACGA 59.762 44.000 0.00 0.00 0.00 4.35
681 724 6.238566 CGGACCTTAATGTAGTATCTCACGAA 60.239 42.308 0.00 0.00 0.00 3.85
682 725 7.521748 CGGACCTTAATGTAGTATCTCACGAAT 60.522 40.741 0.00 0.00 0.00 3.34
683 726 8.790718 GGACCTTAATGTAGTATCTCACGAATA 58.209 37.037 0.00 0.00 0.00 1.75
684 727 9.828852 GACCTTAATGTAGTATCTCACGAATAG 57.171 37.037 0.00 0.00 0.00 1.73
685 728 9.570468 ACCTTAATGTAGTATCTCACGAATAGA 57.430 33.333 0.00 0.00 0.00 1.98
687 730 9.549509 CTTAATGTAGTATCTCACGAATAGAGC 57.450 37.037 0.00 0.00 33.15 4.09
688 731 7.511959 AATGTAGTATCTCACGAATAGAGCA 57.488 36.000 0.00 0.00 33.15 4.26
689 732 7.695480 ATGTAGTATCTCACGAATAGAGCAT 57.305 36.000 0.00 0.00 33.15 3.79
690 733 7.511959 TGTAGTATCTCACGAATAGAGCATT 57.488 36.000 0.00 0.00 33.15 3.56
691 734 7.363431 TGTAGTATCTCACGAATAGAGCATTG 58.637 38.462 0.00 0.00 33.15 2.82
692 735 6.641169 AGTATCTCACGAATAGAGCATTGA 57.359 37.500 0.00 0.00 33.15 2.57
693 736 6.442952 AGTATCTCACGAATAGAGCATTGAC 58.557 40.000 0.00 0.00 33.15 3.18
694 737 4.991153 TCTCACGAATAGAGCATTGACT 57.009 40.909 0.00 0.00 33.15 3.41
695 738 4.676546 TCTCACGAATAGAGCATTGACTG 58.323 43.478 0.00 0.00 33.15 3.51
696 739 4.399303 TCTCACGAATAGAGCATTGACTGA 59.601 41.667 0.00 0.00 33.15 3.41
697 740 4.676546 TCACGAATAGAGCATTGACTGAG 58.323 43.478 0.00 0.00 0.00 3.35
698 741 4.399303 TCACGAATAGAGCATTGACTGAGA 59.601 41.667 0.00 0.00 0.00 3.27
699 742 4.502282 CACGAATAGAGCATTGACTGAGAC 59.498 45.833 0.00 0.00 0.00 3.36
700 743 4.400884 ACGAATAGAGCATTGACTGAGACT 59.599 41.667 0.00 0.00 0.00 3.24
701 744 5.105554 ACGAATAGAGCATTGACTGAGACTT 60.106 40.000 0.00 0.00 0.00 3.01
702 745 5.231779 CGAATAGAGCATTGACTGAGACTTG 59.768 44.000 0.00 0.00 0.00 3.16
703 746 5.929058 ATAGAGCATTGACTGAGACTTGA 57.071 39.130 0.00 0.00 0.00 3.02
704 747 4.191033 AGAGCATTGACTGAGACTTGAG 57.809 45.455 0.00 0.00 0.00 3.02
705 748 3.831333 AGAGCATTGACTGAGACTTGAGA 59.169 43.478 0.00 0.00 0.00 3.27
706 749 3.924144 AGCATTGACTGAGACTTGAGAC 58.076 45.455 0.00 0.00 0.00 3.36
707 750 3.323115 AGCATTGACTGAGACTTGAGACA 59.677 43.478 0.00 0.00 0.00 3.41
708 751 4.020396 AGCATTGACTGAGACTTGAGACAT 60.020 41.667 0.00 0.00 0.00 3.06
709 752 5.186603 AGCATTGACTGAGACTTGAGACATA 59.813 40.000 0.00 0.00 0.00 2.29
710 753 5.290643 GCATTGACTGAGACTTGAGACATAC 59.709 44.000 0.00 0.00 0.00 2.39
711 754 4.686839 TGACTGAGACTTGAGACATACG 57.313 45.455 0.00 0.00 0.00 3.06
712 755 4.324267 TGACTGAGACTTGAGACATACGA 58.676 43.478 0.00 0.00 0.00 3.43
713 756 4.760204 TGACTGAGACTTGAGACATACGAA 59.240 41.667 0.00 0.00 0.00 3.85
714 757 5.106515 TGACTGAGACTTGAGACATACGAAG 60.107 44.000 0.00 0.00 0.00 3.79
715 758 5.004448 ACTGAGACTTGAGACATACGAAGA 58.996 41.667 0.00 0.00 0.00 2.87
716 759 5.650266 ACTGAGACTTGAGACATACGAAGAT 59.350 40.000 0.00 0.00 0.00 2.40
717 760 6.151985 ACTGAGACTTGAGACATACGAAGATT 59.848 38.462 0.00 0.00 0.00 2.40
718 761 6.325596 TGAGACTTGAGACATACGAAGATTG 58.674 40.000 0.00 0.00 0.00 2.67
719 762 6.151144 TGAGACTTGAGACATACGAAGATTGA 59.849 38.462 0.00 0.00 0.00 2.57
720 763 6.925211 AGACTTGAGACATACGAAGATTGAA 58.075 36.000 0.00 0.00 0.00 2.69
721 764 6.809196 AGACTTGAGACATACGAAGATTGAAC 59.191 38.462 0.00 0.00 0.00 3.18
722 765 5.573282 ACTTGAGACATACGAAGATTGAACG 59.427 40.000 0.00 0.00 0.00 3.95
723 766 3.857665 TGAGACATACGAAGATTGAACGC 59.142 43.478 0.00 0.00 0.00 4.84
724 767 3.845178 AGACATACGAAGATTGAACGCA 58.155 40.909 0.00 0.00 0.00 5.24
725 768 4.242475 AGACATACGAAGATTGAACGCAA 58.758 39.130 0.00 0.00 38.60 4.85
726 769 4.688879 AGACATACGAAGATTGAACGCAAA 59.311 37.500 0.00 0.00 37.59 3.68
727 770 5.178623 AGACATACGAAGATTGAACGCAAAA 59.821 36.000 0.00 0.00 37.59 2.44
728 771 5.753744 ACATACGAAGATTGAACGCAAAAA 58.246 33.333 0.00 0.00 37.59 1.94
777 820 7.921786 TGGATCAAAACATTCCAGTTACTAG 57.078 36.000 0.00 0.00 34.65 2.57
779 822 8.598916 TGGATCAAAACATTCCAGTTACTAGTA 58.401 33.333 0.00 0.00 34.65 1.82
780 823 9.099454 GGATCAAAACATTCCAGTTACTAGTAG 57.901 37.037 2.23 0.00 0.00 2.57
781 824 9.654663 GATCAAAACATTCCAGTTACTAGTAGT 57.345 33.333 8.14 8.14 0.00 2.73
882 931 1.798813 GAGCTGAAATTTCGACGGTGT 59.201 47.619 13.34 0.00 0.00 4.16
1048 1115 2.820037 CCGCGGCTTTTCTCCTCC 60.820 66.667 14.67 0.00 0.00 4.30
1049 1116 2.266055 CGCGGCTTTTCTCCTCCT 59.734 61.111 0.00 0.00 0.00 3.69
1050 1117 1.811679 CGCGGCTTTTCTCCTCCTC 60.812 63.158 0.00 0.00 0.00 3.71
1067 1134 1.689273 CCTCCTATTCGTCCTCTTGGG 59.311 57.143 0.00 0.00 0.00 4.12
1122 1189 2.423898 CGGGAGCGAGGCCTTCTTA 61.424 63.158 6.77 0.00 0.00 2.10
1415 1482 4.088781 GTGAGTTCTCTTTACTTTCTCGCG 59.911 45.833 0.00 0.00 0.00 5.87
1437 1504 3.488553 GCGCGGCTGGTTAATTAATTCTT 60.489 43.478 8.83 0.00 0.00 2.52
1438 1505 4.668289 CGCGGCTGGTTAATTAATTCTTT 58.332 39.130 3.39 0.00 0.00 2.52
1440 1507 5.448632 CGCGGCTGGTTAATTAATTCTTTCT 60.449 40.000 3.39 0.00 0.00 2.52
1441 1508 6.238266 CGCGGCTGGTTAATTAATTCTTTCTA 60.238 38.462 3.39 0.00 0.00 2.10
1442 1509 6.910972 GCGGCTGGTTAATTAATTCTTTCTAC 59.089 38.462 3.39 0.00 0.00 2.59
1443 1510 7.415229 CGGCTGGTTAATTAATTCTTTCTACC 58.585 38.462 3.39 5.10 0.00 3.18
1444 1511 7.066525 CGGCTGGTTAATTAATTCTTTCTACCA 59.933 37.037 3.39 8.85 0.00 3.25
1445 1512 8.188799 GGCTGGTTAATTAATTCTTTCTACCAC 58.811 37.037 3.39 5.69 0.00 4.16
1446 1513 8.957466 GCTGGTTAATTAATTCTTTCTACCACT 58.043 33.333 3.39 0.00 0.00 4.00
1478 1545 2.092646 TGTGGGGGTGTATCTGTATTGC 60.093 50.000 0.00 0.00 0.00 3.56
1483 1550 3.901844 GGGGTGTATCTGTATTGCCTAGA 59.098 47.826 0.00 0.00 0.00 2.43
1485 1552 5.163237 GGGGTGTATCTGTATTGCCTAGAAA 60.163 44.000 0.00 0.00 0.00 2.52
1486 1553 5.758784 GGGTGTATCTGTATTGCCTAGAAAC 59.241 44.000 0.00 0.00 0.00 2.78
1488 1555 6.480320 GGTGTATCTGTATTGCCTAGAAACAG 59.520 42.308 0.00 0.00 39.10 3.16
1489 1556 7.042335 GTGTATCTGTATTGCCTAGAAACAGT 58.958 38.462 0.00 0.00 38.88 3.55
1501 1568 4.150804 CCTAGAAACAGTCGAGCTCAAAAC 59.849 45.833 15.40 8.58 0.00 2.43
1535 1602 1.134220 TCACTCAGGCCTGAAACGTTT 60.134 47.619 34.30 14.57 39.39 3.60
1886 1959 2.157701 CGTCTTCTGCTCGAGCTGC 61.158 63.158 35.27 20.84 42.66 5.25
1953 2026 3.700970 TCGAATGCCCCGACTGCA 61.701 61.111 0.00 0.00 43.97 4.41
1997 2204 0.749454 ATGGCGAGGGCAATGAAGAC 60.749 55.000 0.00 0.00 42.43 3.01
2111 2465 0.036952 CCCATGACTTGTGCTCGAGT 60.037 55.000 15.13 8.41 40.65 4.18
2122 2476 2.201732 GTGCTCGAGTTGTGTTTCTCA 58.798 47.619 15.13 0.00 0.00 3.27
2123 2477 2.607635 GTGCTCGAGTTGTGTTTCTCAA 59.392 45.455 15.13 0.00 0.00 3.02
2192 2576 3.787001 GCGGACCTCCTCCCCAAG 61.787 72.222 0.00 0.00 35.21 3.61
2193 2577 3.787001 CGGACCTCCTCCCCAAGC 61.787 72.222 0.00 0.00 35.21 4.01
2240 2624 1.738099 CGTTGACGGGGAGCTCTTG 60.738 63.158 14.64 6.27 35.37 3.02
2281 2665 3.782443 GGTGCCCGGTACCCTCAG 61.782 72.222 13.62 0.00 32.14 3.35
2450 2834 1.075525 CATCCCCACGGACCTCCTA 60.076 63.158 0.00 0.00 42.48 2.94
2499 2883 4.451150 CGGTAGGCGCCAAGAGCA 62.451 66.667 31.54 2.68 44.04 4.26
2500 2884 2.046314 GGTAGGCGCCAAGAGCAA 60.046 61.111 31.54 1.07 44.04 3.91
2501 2885 2.399356 GGTAGGCGCCAAGAGCAAC 61.399 63.158 31.54 13.72 44.04 4.17
2502 2886 1.671054 GTAGGCGCCAAGAGCAACA 60.671 57.895 31.54 0.00 44.04 3.33
2503 2887 1.671054 TAGGCGCCAAGAGCAACAC 60.671 57.895 31.54 0.00 44.04 3.32
2504 2888 2.111999 TAGGCGCCAAGAGCAACACT 62.112 55.000 31.54 5.27 44.04 3.55
2505 2889 2.253452 GCGCCAAGAGCAACACTG 59.747 61.111 0.00 0.00 44.04 3.66
2790 3947 5.333299 ACTACATCAAATGCAGGTACGTA 57.667 39.130 0.00 0.00 0.00 3.57
2791 3948 5.107133 ACTACATCAAATGCAGGTACGTAC 58.893 41.667 17.56 17.56 0.00 3.67
2792 3949 2.927477 ACATCAAATGCAGGTACGTACG 59.073 45.455 18.98 15.01 0.00 3.67
2793 3950 3.183754 CATCAAATGCAGGTACGTACGA 58.816 45.455 24.41 8.64 0.00 3.43
2804 3961 3.444742 AGGTACGTACGACAAATCCATCA 59.555 43.478 24.41 0.00 0.00 3.07
2805 3962 4.098960 AGGTACGTACGACAAATCCATCAT 59.901 41.667 24.41 0.00 0.00 2.45
2806 3963 4.443394 GGTACGTACGACAAATCCATCATC 59.557 45.833 24.41 0.00 0.00 2.92
2807 3964 4.386867 ACGTACGACAAATCCATCATCT 57.613 40.909 24.41 0.00 0.00 2.90
2827 4002 9.838339 ATCATCTATCGTTCTCCTTGTAAATTT 57.162 29.630 0.00 0.00 0.00 1.82
2875 4053 3.764160 GAGCTCATCCCCGGCTTGG 62.764 68.421 9.40 0.00 36.37 3.61
2882 4060 2.105821 TCATCCCCGGCTTGGTTTATAG 59.894 50.000 0.00 0.00 35.15 1.31
2995 4179 4.019919 CAACAAGTGCAAGCGCTAATAT 57.980 40.909 12.05 0.00 39.64 1.28
2996 4180 3.951979 ACAAGTGCAAGCGCTAATATC 57.048 42.857 12.05 0.40 39.64 1.63
3076 4283 2.285083 TCGGCCATGTTAATTTCCTCG 58.715 47.619 2.24 0.00 0.00 4.63
3147 4556 8.341892 AGTCAGGAAAAGAACCTTGATTAATC 57.658 34.615 8.60 8.60 35.35 1.75
3148 4557 8.166726 AGTCAGGAAAAGAACCTTGATTAATCT 58.833 33.333 16.24 0.00 35.35 2.40
3150 4559 9.672673 TCAGGAAAAGAACCTTGATTAATCTAG 57.327 33.333 17.03 17.03 35.35 2.43
3152 4561 9.674068 AGGAAAAGAACCTTGATTAATCTAGTC 57.326 33.333 20.68 14.41 33.55 2.59
3153 4562 9.449719 GGAAAAGAACCTTGATTAATCTAGTCA 57.550 33.333 20.68 0.00 0.00 3.41
3155 4564 9.454859 AAAAGAACCTTGATTAATCTAGTCAGG 57.545 33.333 20.68 16.35 0.00 3.86
3157 4566 8.380742 AGAACCTTGATTAATCTAGTCAGGAA 57.619 34.615 20.68 3.98 0.00 3.36
3161 4570 9.401058 ACCTTGATTAATCTAGTCAGGAAAATG 57.599 33.333 20.68 7.98 0.00 2.32
3162 4571 9.401058 CCTTGATTAATCTAGTCAGGAAAATGT 57.599 33.333 20.68 0.00 0.00 2.71
3167 4576 8.575649 TTAATCTAGTCAGGAAAATGTTTCCC 57.424 34.615 14.68 2.14 39.39 3.97
3168 4577 4.575885 TCTAGTCAGGAAAATGTTTCCCG 58.424 43.478 14.68 6.42 39.39 5.14
3169 4578 1.886542 AGTCAGGAAAATGTTTCCCGC 59.113 47.619 14.68 6.85 39.39 6.13
3172 4581 3.504520 GTCAGGAAAATGTTTCCCGCTTA 59.495 43.478 14.68 0.00 39.39 3.09
3198 4871 0.531974 TTCTCCACTTGTCGGTGTGC 60.532 55.000 0.00 0.00 35.63 4.57
3199 4872 2.279851 TCCACTTGTCGGTGTGCG 60.280 61.111 0.00 0.00 35.63 5.34
3204 4877 3.521308 CTTGTCGGTGTGCGTTGGC 62.521 63.158 0.00 0.00 40.52 4.52
3227 4900 6.417930 GGCGAAAATAATATTCTTGCCACTTC 59.582 38.462 11.71 0.00 35.00 3.01
3299 4979 4.142773 CCGTGCTTGTTTTATAATGTCCGT 60.143 41.667 0.00 0.00 0.00 4.69
3371 5087 1.967779 TCACTGAGGGTCAACATTCGA 59.032 47.619 0.00 0.00 0.00 3.71
3507 5225 7.997773 ATCTAGTGTGTAGAGTCAGTTGTTA 57.002 36.000 0.00 0.00 0.00 2.41
3511 5229 7.948278 AGTGTGTAGAGTCAGTTGTTATTTC 57.052 36.000 0.00 0.00 0.00 2.17
3517 5235 8.208224 TGTAGAGTCAGTTGTTATTTCTTGGAA 58.792 33.333 0.00 0.00 0.00 3.53
3605 5324 0.248843 GAAGAGCCACTGGGTGAGAG 59.751 60.000 3.96 0.00 35.23 3.20
3607 5326 1.915769 GAGCCACTGGGTGAGAGGT 60.916 63.158 3.96 0.00 34.95 3.85
3618 5337 1.609320 GGTGAGAGGTTCAACTGGAGC 60.609 57.143 0.00 0.00 40.53 4.70
3708 5427 3.864686 CCGCATTTCGACGCCCTG 61.865 66.667 0.00 0.00 41.67 4.45
3723 5442 1.277557 GCCCTGGCTCCATATCTACTG 59.722 57.143 0.00 0.00 38.26 2.74
3736 5456 2.623878 TCTACTGAAAAACACCGGCA 57.376 45.000 0.00 0.00 0.00 5.69
3742 5462 4.555262 ACTGAAAAACACCGGCATAATTG 58.445 39.130 0.00 0.00 0.00 2.32
3761 5482 2.865079 TGAACCCTAATTTGTTCGCCA 58.135 42.857 9.32 0.00 42.93 5.69
3771 5492 1.723608 TTGTTCGCCACTGCCACTTG 61.724 55.000 0.00 0.00 0.00 3.16
3790 5521 1.531739 GCCGATCTTGGTTTTGGCCA 61.532 55.000 0.00 0.00 36.55 5.36
3831 5563 6.318648 TCGTAGGGAAATTTTGATCTTCATGG 59.681 38.462 0.00 0.00 0.00 3.66
3851 5583 2.122768 GACCTCTCCATCATCCCTTGT 58.877 52.381 0.00 0.00 0.00 3.16
3881 5613 6.210784 CCTATGATGATCCGGGAGTAGTTAAA 59.789 42.308 0.00 0.00 0.00 1.52
3882 5614 5.943349 TGATGATCCGGGAGTAGTTAAAA 57.057 39.130 0.00 0.00 0.00 1.52
3883 5615 5.914033 TGATGATCCGGGAGTAGTTAAAAG 58.086 41.667 0.00 0.00 0.00 2.27
3884 5616 4.748277 TGATCCGGGAGTAGTTAAAAGG 57.252 45.455 0.00 0.00 0.00 3.11
3886 5618 2.906568 TCCGGGAGTAGTTAAAAGGGT 58.093 47.619 0.00 0.00 0.00 4.34
3887 5619 3.250617 TCCGGGAGTAGTTAAAAGGGTT 58.749 45.455 0.00 0.00 0.00 4.11
3888 5620 3.652387 TCCGGGAGTAGTTAAAAGGGTTT 59.348 43.478 0.00 0.00 0.00 3.27
3889 5621 4.843516 TCCGGGAGTAGTTAAAAGGGTTTA 59.156 41.667 0.00 0.00 0.00 2.01
3890 5622 5.046376 TCCGGGAGTAGTTAAAAGGGTTTAG 60.046 44.000 0.00 0.00 30.92 1.85
3891 5623 5.280164 CCGGGAGTAGTTAAAAGGGTTTAGT 60.280 44.000 0.00 0.00 30.92 2.24
3892 5624 6.233434 CGGGAGTAGTTAAAAGGGTTTAGTT 58.767 40.000 0.00 0.00 30.92 2.24
3895 5627 7.226441 GGAGTAGTTAAAAGGGTTTAGTTGGA 58.774 38.462 0.00 0.00 30.92 3.53
3896 5628 7.720957 GGAGTAGTTAAAAGGGTTTAGTTGGAA 59.279 37.037 0.00 0.00 30.92 3.53
3897 5629 8.687292 AGTAGTTAAAAGGGTTTAGTTGGAAG 57.313 34.615 0.00 0.00 30.92 3.46
3898 5630 8.496916 AGTAGTTAAAAGGGTTTAGTTGGAAGA 58.503 33.333 0.00 0.00 30.92 2.87
3899 5631 9.123902 GTAGTTAAAAGGGTTTAGTTGGAAGAA 57.876 33.333 0.00 0.00 30.92 2.52
3900 5632 8.234136 AGTTAAAAGGGTTTAGTTGGAAGAAG 57.766 34.615 0.00 0.00 30.92 2.85
3902 5634 8.689061 GTTAAAAGGGTTTAGTTGGAAGAAGAA 58.311 33.333 0.00 0.00 30.92 2.52
3903 5635 7.914427 AAAAGGGTTTAGTTGGAAGAAGAAT 57.086 32.000 0.00 0.00 0.00 2.40
3905 5637 9.429109 AAAAGGGTTTAGTTGGAAGAAGAATTA 57.571 29.630 0.00 0.00 0.00 1.40
3906 5638 8.637196 AAGGGTTTAGTTGGAAGAAGAATTAG 57.363 34.615 0.00 0.00 0.00 1.73
3907 5639 7.756614 AGGGTTTAGTTGGAAGAAGAATTAGT 58.243 34.615 0.00 0.00 0.00 2.24
3909 5641 9.682465 GGGTTTAGTTGGAAGAAGAATTAGTAT 57.318 33.333 0.00 0.00 0.00 2.12
3919 5651 9.688091 GGAAGAAGAATTAGTATTTTTCCTCCT 57.312 33.333 2.79 0.00 39.78 3.69
3929 5661 9.581289 TTAGTATTTTTCCTCCTCAAATGTTCA 57.419 29.630 0.00 0.00 0.00 3.18
3930 5662 7.886338 AGTATTTTTCCTCCTCAAATGTTCAC 58.114 34.615 0.00 0.00 0.00 3.18
3932 5664 6.729690 TTTTTCCTCCTCAAATGTTCACAT 57.270 33.333 0.00 0.00 38.41 3.21
3967 5699 3.474083 CCCCCAGGAATTTTGGTGT 57.526 52.632 8.58 0.00 33.73 4.16
3968 5700 2.614134 CCCCCAGGAATTTTGGTGTA 57.386 50.000 8.58 0.00 33.73 2.90
3969 5701 2.176045 CCCCCAGGAATTTTGGTGTAC 58.824 52.381 8.58 0.00 33.73 2.90
3970 5702 2.491825 CCCCCAGGAATTTTGGTGTACA 60.492 50.000 0.00 0.00 33.73 2.90
3971 5703 3.440127 CCCCAGGAATTTTGGTGTACAT 58.560 45.455 0.00 0.00 33.73 2.29
3972 5704 3.447229 CCCCAGGAATTTTGGTGTACATC 59.553 47.826 0.00 0.00 33.73 3.06
3973 5705 3.447229 CCCAGGAATTTTGGTGTACATCC 59.553 47.826 3.07 2.35 33.73 3.51
3974 5706 3.128589 CCAGGAATTTTGGTGTACATCCG 59.871 47.826 3.07 0.00 31.25 4.18
3975 5707 2.752903 AGGAATTTTGGTGTACATCCGC 59.247 45.455 3.07 0.00 31.25 5.54
3976 5708 2.159296 GGAATTTTGGTGTACATCCGCC 60.159 50.000 3.07 0.00 35.49 6.13
3977 5709 2.208132 ATTTTGGTGTACATCCGCCA 57.792 45.000 3.07 0.79 43.07 5.69
3978 5710 2.208132 TTTTGGTGTACATCCGCCAT 57.792 45.000 3.07 0.00 44.11 4.40
3979 5711 2.208132 TTTGGTGTACATCCGCCATT 57.792 45.000 3.07 0.00 44.11 3.16
3980 5712 1.458398 TTGGTGTACATCCGCCATTG 58.542 50.000 3.07 0.00 44.11 2.82
3981 5713 0.326595 TGGTGTACATCCGCCATTGT 59.673 50.000 3.07 0.00 40.01 2.71
3982 5714 0.732571 GGTGTACATCCGCCATTGTG 59.267 55.000 0.00 0.00 35.02 3.33
3983 5715 1.448985 GTGTACATCCGCCATTGTGT 58.551 50.000 0.00 0.00 0.00 3.72
3984 5716 1.810151 GTGTACATCCGCCATTGTGTT 59.190 47.619 0.00 0.00 0.00 3.32
3985 5717 2.080693 TGTACATCCGCCATTGTGTTC 58.919 47.619 0.00 0.00 0.00 3.18
3986 5718 2.290008 TGTACATCCGCCATTGTGTTCT 60.290 45.455 0.00 0.00 0.00 3.01
3987 5719 2.779755 ACATCCGCCATTGTGTTCTA 57.220 45.000 0.00 0.00 0.00 2.10
3988 5720 3.281727 ACATCCGCCATTGTGTTCTAT 57.718 42.857 0.00 0.00 0.00 1.98
3989 5721 3.206150 ACATCCGCCATTGTGTTCTATC 58.794 45.455 0.00 0.00 0.00 2.08
3990 5722 3.118261 ACATCCGCCATTGTGTTCTATCT 60.118 43.478 0.00 0.00 0.00 1.98
3991 5723 3.627395 TCCGCCATTGTGTTCTATCTT 57.373 42.857 0.00 0.00 0.00 2.40
3992 5724 3.950397 TCCGCCATTGTGTTCTATCTTT 58.050 40.909 0.00 0.00 0.00 2.52
3993 5725 3.938963 TCCGCCATTGTGTTCTATCTTTC 59.061 43.478 0.00 0.00 0.00 2.62
3994 5726 3.941483 CCGCCATTGTGTTCTATCTTTCT 59.059 43.478 0.00 0.00 0.00 2.52
3995 5727 4.034510 CCGCCATTGTGTTCTATCTTTCTC 59.965 45.833 0.00 0.00 0.00 2.87
3996 5728 4.034510 CGCCATTGTGTTCTATCTTTCTCC 59.965 45.833 0.00 0.00 0.00 3.71
3997 5729 5.189180 GCCATTGTGTTCTATCTTTCTCCT 58.811 41.667 0.00 0.00 0.00 3.69
3998 5730 5.295540 GCCATTGTGTTCTATCTTTCTCCTC 59.704 44.000 0.00 0.00 0.00 3.71
3999 5731 6.648192 CCATTGTGTTCTATCTTTCTCCTCT 58.352 40.000 0.00 0.00 0.00 3.69
4000 5732 6.538021 CCATTGTGTTCTATCTTTCTCCTCTG 59.462 42.308 0.00 0.00 0.00 3.35
4001 5733 5.667539 TGTGTTCTATCTTTCTCCTCTGG 57.332 43.478 0.00 0.00 0.00 3.86
4002 5734 5.087323 TGTGTTCTATCTTTCTCCTCTGGT 58.913 41.667 0.00 0.00 0.00 4.00
4003 5735 5.186021 TGTGTTCTATCTTTCTCCTCTGGTC 59.814 44.000 0.00 0.00 0.00 4.02
4004 5736 5.186021 GTGTTCTATCTTTCTCCTCTGGTCA 59.814 44.000 0.00 0.00 0.00 4.02
4005 5737 5.960811 TGTTCTATCTTTCTCCTCTGGTCAT 59.039 40.000 0.00 0.00 0.00 3.06
4006 5738 6.127225 TGTTCTATCTTTCTCCTCTGGTCATG 60.127 42.308 0.00 0.00 0.00 3.07
4007 5739 5.523588 TCTATCTTTCTCCTCTGGTCATGT 58.476 41.667 0.00 0.00 0.00 3.21
4008 5740 3.969287 TCTTTCTCCTCTGGTCATGTG 57.031 47.619 0.00 0.00 0.00 3.21
4009 5741 3.510459 TCTTTCTCCTCTGGTCATGTGA 58.490 45.455 0.00 0.00 0.00 3.58
4010 5742 3.513119 TCTTTCTCCTCTGGTCATGTGAG 59.487 47.826 0.00 0.00 0.00 3.51
4011 5743 1.189752 TCTCCTCTGGTCATGTGAGC 58.810 55.000 5.31 5.31 42.48 4.26
4012 5744 0.179116 CTCCTCTGGTCATGTGAGCG 60.179 60.000 7.59 3.47 44.88 5.03
4013 5745 0.900182 TCCTCTGGTCATGTGAGCGT 60.900 55.000 7.59 0.00 44.88 5.07
4014 5746 0.459237 CCTCTGGTCATGTGAGCGTC 60.459 60.000 7.59 0.00 44.88 5.19
4015 5747 0.459237 CTCTGGTCATGTGAGCGTCC 60.459 60.000 7.59 0.00 44.88 4.79
4016 5748 1.807165 CTGGTCATGTGAGCGTCCG 60.807 63.158 7.59 0.00 44.88 4.79
4017 5749 2.212900 CTGGTCATGTGAGCGTCCGA 62.213 60.000 7.59 0.00 44.88 4.55
4018 5750 1.141881 GGTCATGTGAGCGTCCGAT 59.858 57.895 0.00 0.00 32.58 4.18
4019 5751 0.872021 GGTCATGTGAGCGTCCGATC 60.872 60.000 0.00 0.00 32.58 3.69
4020 5752 0.101399 GTCATGTGAGCGTCCGATCT 59.899 55.000 6.50 0.00 0.00 2.75
4021 5753 0.817654 TCATGTGAGCGTCCGATCTT 59.182 50.000 6.50 0.00 0.00 2.40
4022 5754 0.926155 CATGTGAGCGTCCGATCTTG 59.074 55.000 6.50 0.00 0.00 3.02
4023 5755 0.817654 ATGTGAGCGTCCGATCTTGA 59.182 50.000 6.50 0.00 0.00 3.02
4024 5756 0.817654 TGTGAGCGTCCGATCTTGAT 59.182 50.000 6.50 0.00 0.00 2.57
4025 5757 1.204704 TGTGAGCGTCCGATCTTGATT 59.795 47.619 6.50 0.00 0.00 2.57
4033 6021 2.474359 GTCCGATCTTGATTGCGATCAG 59.526 50.000 16.16 10.92 42.90 2.90
4034 6022 2.362077 TCCGATCTTGATTGCGATCAGA 59.638 45.455 16.16 15.24 42.90 3.27
4047 6035 6.507958 TTGCGATCAGATTTGTTAATGGAA 57.492 33.333 0.00 0.00 0.00 3.53
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.547697 TTTTTGAGGATTTAAGGGTTAAGGG 57.452 36.000 0.00 0.00 0.00 3.95
23 24 6.816616 TTGAGGGTTGGACCTTTAAATTTT 57.183 33.333 0.00 0.00 42.10 1.82
24 25 6.408776 GGTTTGAGGGTTGGACCTTTAAATTT 60.409 38.462 0.00 0.00 42.10 1.82
25 26 5.071250 GGTTTGAGGGTTGGACCTTTAAATT 59.929 40.000 3.24 0.00 42.10 1.82
26 27 4.591498 GGTTTGAGGGTTGGACCTTTAAAT 59.409 41.667 3.24 0.00 42.10 1.40
28 29 3.568443 GGTTTGAGGGTTGGACCTTTAA 58.432 45.455 0.00 0.00 42.10 1.52
68 69 2.321719 GTTTTGCTCCCCAACCCTTAA 58.678 47.619 0.00 0.00 31.97 1.85
102 103 2.663279 GCGAGTATAACCGCCAAATG 57.337 50.000 8.35 0.00 45.06 2.32
109 110 2.728383 CCCGCGCGAGTATAACCG 60.728 66.667 34.63 10.97 0.00 4.44
110 111 1.371389 CTCCCGCGCGAGTATAACC 60.371 63.158 34.63 0.00 0.00 2.85
111 112 1.371389 CCTCCCGCGCGAGTATAAC 60.371 63.158 34.63 0.00 0.00 1.89
112 113 1.102809 TTCCTCCCGCGCGAGTATAA 61.103 55.000 34.63 16.70 0.00 0.98
113 114 1.102809 TTTCCTCCCGCGCGAGTATA 61.103 55.000 34.63 10.96 0.00 1.47
114 115 1.952102 TTTTCCTCCCGCGCGAGTAT 61.952 55.000 34.63 0.00 0.00 2.12
115 116 2.157305 TTTTTCCTCCCGCGCGAGTA 62.157 55.000 34.63 15.06 0.00 2.59
116 117 3.524648 TTTTTCCTCCCGCGCGAGT 62.525 57.895 34.63 0.00 0.00 4.18
117 118 2.740826 TTTTTCCTCCCGCGCGAG 60.741 61.111 34.63 20.97 0.00 5.03
131 132 1.893137 GCGGGAGTTGGGAGAATTTTT 59.107 47.619 0.00 0.00 0.00 1.94
132 133 1.545841 GCGGGAGTTGGGAGAATTTT 58.454 50.000 0.00 0.00 0.00 1.82
133 134 0.676782 CGCGGGAGTTGGGAGAATTT 60.677 55.000 0.00 0.00 0.00 1.82
134 135 1.078426 CGCGGGAGTTGGGAGAATT 60.078 57.895 0.00 0.00 0.00 2.17
135 136 2.240162 GACGCGGGAGTTGGGAGAAT 62.240 60.000 12.47 0.00 0.00 2.40
136 137 2.920912 ACGCGGGAGTTGGGAGAA 60.921 61.111 12.47 0.00 0.00 2.87
137 138 3.379445 GACGCGGGAGTTGGGAGA 61.379 66.667 12.47 0.00 0.00 3.71
138 139 3.234630 TTGACGCGGGAGTTGGGAG 62.235 63.158 12.47 0.00 0.00 4.30
139 140 3.235481 TTGACGCGGGAGTTGGGA 61.235 61.111 12.47 0.00 0.00 4.37
140 141 3.047877 GTTGACGCGGGAGTTGGG 61.048 66.667 12.47 0.00 0.00 4.12
141 142 3.411351 CGTTGACGCGGGAGTTGG 61.411 66.667 12.47 0.00 0.00 3.77
207 208 0.320073 TCCCCATGAACGACGTTGTC 60.320 55.000 19.60 5.24 0.00 3.18
208 209 0.107081 TTCCCCATGAACGACGTTGT 59.893 50.000 19.60 1.48 0.00 3.32
209 210 1.448985 ATTCCCCATGAACGACGTTG 58.551 50.000 19.60 4.40 35.31 4.10
210 211 3.553828 ATATTCCCCATGAACGACGTT 57.446 42.857 14.11 14.11 35.31 3.99
211 212 3.463944 GAATATTCCCCATGAACGACGT 58.536 45.455 3.92 0.00 35.31 4.34
212 213 2.806244 GGAATATTCCCCATGAACGACG 59.194 50.000 22.09 0.00 41.62 5.12
213 214 2.806244 CGGAATATTCCCCATGAACGAC 59.194 50.000 25.60 0.16 44.67 4.34
214 215 2.436542 ACGGAATATTCCCCATGAACGA 59.563 45.455 25.60 0.00 44.67 3.85
215 216 2.846193 ACGGAATATTCCCCATGAACG 58.154 47.619 25.60 14.85 44.67 3.95
216 217 7.881232 TCTTATAACGGAATATTCCCCATGAAC 59.119 37.037 25.60 1.98 44.67 3.18
217 218 7.980032 TCTTATAACGGAATATTCCCCATGAA 58.020 34.615 25.60 14.64 44.67 2.57
218 219 7.562259 TCTTATAACGGAATATTCCCCATGA 57.438 36.000 25.60 13.14 44.67 3.07
219 220 8.807948 ATTCTTATAACGGAATATTCCCCATG 57.192 34.615 25.60 15.38 44.67 3.66
220 221 9.243105 CAATTCTTATAACGGAATATTCCCCAT 57.757 33.333 25.60 18.15 44.67 4.00
221 222 7.668052 CCAATTCTTATAACGGAATATTCCCCA 59.332 37.037 25.60 13.04 44.67 4.96
222 223 7.122204 CCCAATTCTTATAACGGAATATTCCCC 59.878 40.741 25.60 6.05 44.67 4.81
223 224 7.668469 ACCCAATTCTTATAACGGAATATTCCC 59.332 37.037 25.60 10.60 44.67 3.97
224 225 8.631480 ACCCAATTCTTATAACGGAATATTCC 57.369 34.615 22.63 22.63 44.05 3.01
227 228 9.635404 TCAAACCCAATTCTTATAACGGAATAT 57.365 29.630 1.56 0.00 32.65 1.28
228 229 9.116067 CTCAAACCCAATTCTTATAACGGAATA 57.884 33.333 1.56 0.00 32.65 1.75
229 230 7.068226 CCTCAAACCCAATTCTTATAACGGAAT 59.932 37.037 0.00 0.00 34.14 3.01
230 231 6.376018 CCTCAAACCCAATTCTTATAACGGAA 59.624 38.462 0.00 0.00 0.00 4.30
231 232 5.883673 CCTCAAACCCAATTCTTATAACGGA 59.116 40.000 0.00 0.00 0.00 4.69
232 233 5.883673 TCCTCAAACCCAATTCTTATAACGG 59.116 40.000 0.00 0.00 0.00 4.44
233 234 6.995511 TCCTCAAACCCAATTCTTATAACG 57.004 37.500 0.00 0.00 0.00 3.18
234 235 9.190317 AGAATCCTCAAACCCAATTCTTATAAC 57.810 33.333 0.00 0.00 33.96 1.89
237 238 9.942526 ATTAGAATCCTCAAACCCAATTCTTAT 57.057 29.630 0.00 0.00 37.70 1.73
238 239 9.408648 GATTAGAATCCTCAAACCCAATTCTTA 57.591 33.333 0.00 0.00 37.70 2.10
239 240 8.118600 AGATTAGAATCCTCAAACCCAATTCTT 58.881 33.333 0.00 0.00 37.70 2.52
240 241 7.646884 AGATTAGAATCCTCAAACCCAATTCT 58.353 34.615 0.00 0.00 39.38 2.40
241 242 7.888250 AGATTAGAATCCTCAAACCCAATTC 57.112 36.000 0.00 0.00 36.04 2.17
242 243 8.534496 CAAAGATTAGAATCCTCAAACCCAATT 58.466 33.333 0.00 0.00 36.04 2.32
243 244 7.364144 GCAAAGATTAGAATCCTCAAACCCAAT 60.364 37.037 0.00 0.00 36.04 3.16
244 245 6.071391 GCAAAGATTAGAATCCTCAAACCCAA 60.071 38.462 0.00 0.00 36.04 4.12
245 246 5.418840 GCAAAGATTAGAATCCTCAAACCCA 59.581 40.000 0.00 0.00 36.04 4.51
246 247 5.163509 GGCAAAGATTAGAATCCTCAAACCC 60.164 44.000 0.00 0.00 36.04 4.11
247 248 5.163509 GGGCAAAGATTAGAATCCTCAAACC 60.164 44.000 0.00 0.00 36.04 3.27
248 249 5.163509 GGGGCAAAGATTAGAATCCTCAAAC 60.164 44.000 0.00 0.00 36.04 2.93
249 250 4.956075 GGGGCAAAGATTAGAATCCTCAAA 59.044 41.667 0.00 0.00 36.04 2.69
250 251 4.230502 AGGGGCAAAGATTAGAATCCTCAA 59.769 41.667 0.00 0.00 36.04 3.02
251 252 3.788142 AGGGGCAAAGATTAGAATCCTCA 59.212 43.478 0.00 0.00 36.04 3.86
252 253 4.140536 CAGGGGCAAAGATTAGAATCCTC 58.859 47.826 0.00 0.00 36.04 3.71
253 254 3.529319 ACAGGGGCAAAGATTAGAATCCT 59.471 43.478 0.00 0.00 36.04 3.24
254 255 3.903467 ACAGGGGCAAAGATTAGAATCC 58.097 45.455 0.00 0.00 36.04 3.01
255 256 5.921962 AAACAGGGGCAAAGATTAGAATC 57.078 39.130 0.00 0.00 35.64 2.52
256 257 6.269769 TGAAAAACAGGGGCAAAGATTAGAAT 59.730 34.615 0.00 0.00 0.00 2.40
257 258 5.600484 TGAAAAACAGGGGCAAAGATTAGAA 59.400 36.000 0.00 0.00 0.00 2.10
258 259 5.144100 TGAAAAACAGGGGCAAAGATTAGA 58.856 37.500 0.00 0.00 0.00 2.10
259 260 5.467035 TGAAAAACAGGGGCAAAGATTAG 57.533 39.130 0.00 0.00 0.00 1.73
260 261 5.129485 TGTTGAAAAACAGGGGCAAAGATTA 59.871 36.000 0.00 0.00 0.00 1.75
261 262 4.080638 TGTTGAAAAACAGGGGCAAAGATT 60.081 37.500 0.00 0.00 0.00 2.40
262 263 3.454082 TGTTGAAAAACAGGGGCAAAGAT 59.546 39.130 0.00 0.00 0.00 2.40
263 264 2.834549 TGTTGAAAAACAGGGGCAAAGA 59.165 40.909 0.00 0.00 0.00 2.52
264 265 2.935849 GTGTTGAAAAACAGGGGCAAAG 59.064 45.455 0.00 0.00 32.64 2.77
265 266 2.675317 CGTGTTGAAAAACAGGGGCAAA 60.675 45.455 3.91 0.00 35.56 3.68
266 267 1.134965 CGTGTTGAAAAACAGGGGCAA 60.135 47.619 3.91 0.00 35.56 4.52
267 268 0.457851 CGTGTTGAAAAACAGGGGCA 59.542 50.000 3.91 0.00 35.56 5.36
268 269 0.458260 ACGTGTTGAAAAACAGGGGC 59.542 50.000 13.81 0.00 41.38 5.80
269 270 4.373348 TTTACGTGTTGAAAAACAGGGG 57.627 40.909 13.81 1.08 41.38 4.79
270 271 5.287513 CACTTTTACGTGTTGAAAAACAGGG 59.712 40.000 13.81 3.12 41.38 4.45
271 272 5.220135 GCACTTTTACGTGTTGAAAAACAGG 60.220 40.000 0.00 9.13 42.40 4.00
272 273 5.343593 TGCACTTTTACGTGTTGAAAAACAG 59.656 36.000 0.00 0.00 37.24 3.16
273 274 5.220381 TGCACTTTTACGTGTTGAAAAACA 58.780 33.333 0.00 0.00 37.24 2.83
274 275 5.748872 TGCACTTTTACGTGTTGAAAAAC 57.251 34.783 0.00 0.00 37.24 2.43
275 276 8.462143 TTTATGCACTTTTACGTGTTGAAAAA 57.538 26.923 0.00 0.00 37.24 1.94
276 277 8.462143 TTTTATGCACTTTTACGTGTTGAAAA 57.538 26.923 0.00 0.00 37.24 2.29
277 278 8.635877 ATTTTATGCACTTTTACGTGTTGAAA 57.364 26.923 0.00 0.00 37.24 2.69
278 279 7.915923 TGATTTTATGCACTTTTACGTGTTGAA 59.084 29.630 0.00 0.00 37.24 2.69
279 280 7.418408 TGATTTTATGCACTTTTACGTGTTGA 58.582 30.769 0.00 0.00 37.24 3.18
280 281 7.616103 TGATTTTATGCACTTTTACGTGTTG 57.384 32.000 0.00 0.00 37.24 3.33
281 282 8.810652 AATGATTTTATGCACTTTTACGTGTT 57.189 26.923 0.00 0.00 37.24 3.32
282 283 8.810652 AAATGATTTTATGCACTTTTACGTGT 57.189 26.923 0.00 0.00 37.24 4.49
288 289 9.949174 GGTTCAAAAATGATTTTATGCACTTTT 57.051 25.926 3.26 0.00 36.62 2.27
289 290 8.567104 GGGTTCAAAAATGATTTTATGCACTTT 58.433 29.630 3.26 0.00 36.62 2.66
290 291 7.938490 AGGGTTCAAAAATGATTTTATGCACTT 59.062 29.630 3.26 0.00 36.62 3.16
291 292 7.452562 AGGGTTCAAAAATGATTTTATGCACT 58.547 30.769 3.26 0.00 36.62 4.40
292 293 7.671495 AGGGTTCAAAAATGATTTTATGCAC 57.329 32.000 3.26 5.60 36.62 4.57
293 294 9.784531 TTAAGGGTTCAAAAATGATTTTATGCA 57.215 25.926 3.26 0.00 36.62 3.96
298 299 8.126074 GCGTTTTAAGGGTTCAAAAATGATTTT 58.874 29.630 0.00 0.00 39.30 1.82
299 300 7.497579 AGCGTTTTAAGGGTTCAAAAATGATTT 59.502 29.630 0.00 0.00 33.09 2.17
300 301 6.989759 AGCGTTTTAAGGGTTCAAAAATGATT 59.010 30.769 0.00 0.00 33.09 2.57
301 302 6.521162 AGCGTTTTAAGGGTTCAAAAATGAT 58.479 32.000 0.00 0.00 33.09 2.45
302 303 5.908341 AGCGTTTTAAGGGTTCAAAAATGA 58.092 33.333 0.00 0.00 33.09 2.57
303 304 6.921307 ACTAGCGTTTTAAGGGTTCAAAAATG 59.079 34.615 0.00 0.00 33.99 2.32
304 305 7.046292 ACTAGCGTTTTAAGGGTTCAAAAAT 57.954 32.000 0.00 0.00 0.00 1.82
305 306 6.453926 ACTAGCGTTTTAAGGGTTCAAAAA 57.546 33.333 0.00 0.00 0.00 1.94
306 307 7.565323 TTACTAGCGTTTTAAGGGTTCAAAA 57.435 32.000 0.00 0.00 0.00 2.44
307 308 7.498570 TCTTTACTAGCGTTTTAAGGGTTCAAA 59.501 33.333 0.00 0.00 0.00 2.69
308 309 6.991531 TCTTTACTAGCGTTTTAAGGGTTCAA 59.008 34.615 0.00 0.00 0.00 2.69
309 310 6.523840 TCTTTACTAGCGTTTTAAGGGTTCA 58.476 36.000 0.00 0.00 0.00 3.18
310 311 7.606858 ATCTTTACTAGCGTTTTAAGGGTTC 57.393 36.000 0.00 0.00 0.00 3.62
311 312 7.991084 AATCTTTACTAGCGTTTTAAGGGTT 57.009 32.000 0.00 0.00 0.00 4.11
312 313 7.662669 TCAAATCTTTACTAGCGTTTTAAGGGT 59.337 33.333 0.00 0.00 0.00 4.34
313 314 8.036273 TCAAATCTTTACTAGCGTTTTAAGGG 57.964 34.615 0.00 0.00 0.00 3.95
314 315 8.175716 CCTCAAATCTTTACTAGCGTTTTAAGG 58.824 37.037 0.00 0.00 0.00 2.69
315 316 8.175716 CCCTCAAATCTTTACTAGCGTTTTAAG 58.824 37.037 0.00 0.00 0.00 1.85
316 317 7.662669 ACCCTCAAATCTTTACTAGCGTTTTAA 59.337 33.333 0.00 0.00 0.00 1.52
317 318 7.163441 ACCCTCAAATCTTTACTAGCGTTTTA 58.837 34.615 0.00 0.00 0.00 1.52
318 319 6.002082 ACCCTCAAATCTTTACTAGCGTTTT 58.998 36.000 0.00 0.00 0.00 2.43
319 320 5.557866 ACCCTCAAATCTTTACTAGCGTTT 58.442 37.500 0.00 0.00 0.00 3.60
320 321 5.161943 ACCCTCAAATCTTTACTAGCGTT 57.838 39.130 0.00 0.00 0.00 4.84
321 322 4.820894 ACCCTCAAATCTTTACTAGCGT 57.179 40.909 0.00 0.00 0.00 5.07
322 323 5.175859 TCAACCCTCAAATCTTTACTAGCG 58.824 41.667 0.00 0.00 0.00 4.26
323 324 6.094186 CCTTCAACCCTCAAATCTTTACTAGC 59.906 42.308 0.00 0.00 0.00 3.42
324 325 6.599638 CCCTTCAACCCTCAAATCTTTACTAG 59.400 42.308 0.00 0.00 0.00 2.57
325 326 6.045106 ACCCTTCAACCCTCAAATCTTTACTA 59.955 38.462 0.00 0.00 0.00 1.82
326 327 5.162980 ACCCTTCAACCCTCAAATCTTTACT 60.163 40.000 0.00 0.00 0.00 2.24
327 328 5.077564 ACCCTTCAACCCTCAAATCTTTAC 58.922 41.667 0.00 0.00 0.00 2.01
328 329 5.333566 ACCCTTCAACCCTCAAATCTTTA 57.666 39.130 0.00 0.00 0.00 1.85
329 330 4.199002 ACCCTTCAACCCTCAAATCTTT 57.801 40.909 0.00 0.00 0.00 2.52
330 331 3.903530 ACCCTTCAACCCTCAAATCTT 57.096 42.857 0.00 0.00 0.00 2.40
331 332 3.399305 AGAACCCTTCAACCCTCAAATCT 59.601 43.478 0.00 0.00 0.00 2.40
332 333 3.767711 AGAACCCTTCAACCCTCAAATC 58.232 45.455 0.00 0.00 0.00 2.17
333 334 3.903530 AGAACCCTTCAACCCTCAAAT 57.096 42.857 0.00 0.00 0.00 2.32
334 335 3.720002 AGTAGAACCCTTCAACCCTCAAA 59.280 43.478 0.00 0.00 0.00 2.69
335 336 3.323775 AGTAGAACCCTTCAACCCTCAA 58.676 45.455 0.00 0.00 0.00 3.02
336 337 2.986050 AGTAGAACCCTTCAACCCTCA 58.014 47.619 0.00 0.00 0.00 3.86
337 338 5.695424 ATTAGTAGAACCCTTCAACCCTC 57.305 43.478 0.00 0.00 0.00 4.30
338 339 7.574607 CATTATTAGTAGAACCCTTCAACCCT 58.425 38.462 0.00 0.00 0.00 4.34
339 340 6.262496 GCATTATTAGTAGAACCCTTCAACCC 59.738 42.308 0.00 0.00 0.00 4.11
340 341 7.054751 AGCATTATTAGTAGAACCCTTCAACC 58.945 38.462 0.00 0.00 0.00 3.77
341 342 7.988028 AGAGCATTATTAGTAGAACCCTTCAAC 59.012 37.037 0.00 0.00 0.00 3.18
342 343 8.090788 AGAGCATTATTAGTAGAACCCTTCAA 57.909 34.615 0.00 0.00 0.00 2.69
343 344 7.676683 AGAGCATTATTAGTAGAACCCTTCA 57.323 36.000 0.00 0.00 0.00 3.02
344 345 9.699703 CTTAGAGCATTATTAGTAGAACCCTTC 57.300 37.037 0.00 0.00 0.00 3.46
345 346 8.151596 GCTTAGAGCATTATTAGTAGAACCCTT 58.848 37.037 0.00 0.00 41.89 3.95
346 347 7.511028 AGCTTAGAGCATTATTAGTAGAACCCT 59.489 37.037 2.47 0.00 45.56 4.34
347 348 7.672240 AGCTTAGAGCATTATTAGTAGAACCC 58.328 38.462 2.47 0.00 45.56 4.11
348 349 8.361139 TGAGCTTAGAGCATTATTAGTAGAACC 58.639 37.037 2.47 0.00 45.56 3.62
349 350 9.405587 CTGAGCTTAGAGCATTATTAGTAGAAC 57.594 37.037 0.00 0.00 45.56 3.01
350 351 8.085296 GCTGAGCTTAGAGCATTATTAGTAGAA 58.915 37.037 10.16 0.00 45.56 2.10
351 352 7.450014 AGCTGAGCTTAGAGCATTATTAGTAGA 59.550 37.037 10.16 0.00 45.56 2.59
352 353 7.601856 AGCTGAGCTTAGAGCATTATTAGTAG 58.398 38.462 10.16 0.00 45.56 2.57
353 354 7.531857 AGCTGAGCTTAGAGCATTATTAGTA 57.468 36.000 10.16 0.00 45.56 1.82
354 355 6.418057 AGCTGAGCTTAGAGCATTATTAGT 57.582 37.500 10.16 0.00 45.56 2.24
385 386 3.279434 GTGGCCGATAGAGGAAAAACAT 58.721 45.455 0.00 0.00 39.76 2.71
464 497 9.752274 CTACCATCGTACTATATCTACGTTTTC 57.248 37.037 0.00 0.00 38.49 2.29
533 570 1.748493 GTTATGGCGGCAGAAAATGGA 59.252 47.619 21.21 0.00 0.00 3.41
538 575 1.237954 TTGCGTTATGGCGGCAGAAA 61.238 50.000 21.21 12.82 35.06 2.52
546 583 3.791353 GCTACATCTTTTTGCGTTATGGC 59.209 43.478 0.00 0.00 0.00 4.40
651 694 9.797642 TGAGATACTACATTAAGGTCCGTATAA 57.202 33.333 12.32 3.42 0.00 0.98
652 695 9.224267 GTGAGATACTACATTAAGGTCCGTATA 57.776 37.037 12.32 0.22 0.00 1.47
653 696 7.094890 CGTGAGATACTACATTAAGGTCCGTAT 60.095 40.741 12.23 12.23 0.00 3.06
654 697 6.203530 CGTGAGATACTACATTAAGGTCCGTA 59.796 42.308 0.00 0.49 0.00 4.02
655 698 5.008415 CGTGAGATACTACATTAAGGTCCGT 59.992 44.000 0.00 0.00 0.00 4.69
656 699 5.237996 TCGTGAGATACTACATTAAGGTCCG 59.762 44.000 0.00 0.00 33.31 4.79
657 700 6.630444 TCGTGAGATACTACATTAAGGTCC 57.370 41.667 0.00 0.00 33.31 4.46
658 701 9.828852 CTATTCGTGAGATACTACATTAAGGTC 57.171 37.037 0.00 0.00 41.60 3.85
659 702 9.570468 TCTATTCGTGAGATACTACATTAAGGT 57.430 33.333 0.00 0.00 41.60 3.50
661 704 9.549509 GCTCTATTCGTGAGATACTACATTAAG 57.450 37.037 0.00 0.00 41.60 1.85
662 705 9.063615 TGCTCTATTCGTGAGATACTACATTAA 57.936 33.333 0.00 0.00 41.60 1.40
663 706 8.617290 TGCTCTATTCGTGAGATACTACATTA 57.383 34.615 0.00 0.00 41.60 1.90
664 707 7.511959 TGCTCTATTCGTGAGATACTACATT 57.488 36.000 0.00 0.00 41.60 2.71
665 708 7.695480 ATGCTCTATTCGTGAGATACTACAT 57.305 36.000 0.00 0.00 41.60 2.29
666 709 7.228706 TCAATGCTCTATTCGTGAGATACTACA 59.771 37.037 0.00 0.00 41.60 2.74
667 710 7.535940 GTCAATGCTCTATTCGTGAGATACTAC 59.464 40.741 0.00 0.00 41.60 2.73
668 711 7.445707 AGTCAATGCTCTATTCGTGAGATACTA 59.554 37.037 0.00 0.00 41.60 1.82
669 712 6.264292 AGTCAATGCTCTATTCGTGAGATACT 59.736 38.462 0.00 0.00 41.60 2.12
670 713 6.362016 CAGTCAATGCTCTATTCGTGAGATAC 59.638 42.308 0.00 0.00 41.60 2.24
671 714 6.263168 TCAGTCAATGCTCTATTCGTGAGATA 59.737 38.462 0.00 0.00 41.60 1.98
672 715 5.068329 TCAGTCAATGCTCTATTCGTGAGAT 59.932 40.000 0.00 0.00 41.60 2.75
673 716 4.399303 TCAGTCAATGCTCTATTCGTGAGA 59.601 41.667 0.00 0.00 39.20 3.27
674 717 4.676546 TCAGTCAATGCTCTATTCGTGAG 58.323 43.478 0.00 0.00 34.87 3.51
675 718 4.399303 TCTCAGTCAATGCTCTATTCGTGA 59.601 41.667 0.00 0.00 0.00 4.35
676 719 4.502282 GTCTCAGTCAATGCTCTATTCGTG 59.498 45.833 0.00 0.00 0.00 4.35
677 720 4.400884 AGTCTCAGTCAATGCTCTATTCGT 59.599 41.667 0.00 0.00 0.00 3.85
678 721 4.930963 AGTCTCAGTCAATGCTCTATTCG 58.069 43.478 0.00 0.00 0.00 3.34
679 722 6.336566 TCAAGTCTCAGTCAATGCTCTATTC 58.663 40.000 0.00 0.00 0.00 1.75
680 723 6.154192 TCTCAAGTCTCAGTCAATGCTCTATT 59.846 38.462 0.00 0.00 0.00 1.73
681 724 5.655974 TCTCAAGTCTCAGTCAATGCTCTAT 59.344 40.000 0.00 0.00 0.00 1.98
682 725 5.012893 TCTCAAGTCTCAGTCAATGCTCTA 58.987 41.667 0.00 0.00 0.00 2.43
683 726 3.831333 TCTCAAGTCTCAGTCAATGCTCT 59.169 43.478 0.00 0.00 0.00 4.09
684 727 3.925913 GTCTCAAGTCTCAGTCAATGCTC 59.074 47.826 0.00 0.00 0.00 4.26
685 728 3.323115 TGTCTCAAGTCTCAGTCAATGCT 59.677 43.478 0.00 0.00 0.00 3.79
686 729 3.657634 TGTCTCAAGTCTCAGTCAATGC 58.342 45.455 0.00 0.00 0.00 3.56
687 730 5.514559 CGTATGTCTCAAGTCTCAGTCAATG 59.485 44.000 0.00 0.00 0.00 2.82
688 731 5.416013 TCGTATGTCTCAAGTCTCAGTCAAT 59.584 40.000 0.00 0.00 0.00 2.57
689 732 4.760204 TCGTATGTCTCAAGTCTCAGTCAA 59.240 41.667 0.00 0.00 0.00 3.18
690 733 4.324267 TCGTATGTCTCAAGTCTCAGTCA 58.676 43.478 0.00 0.00 0.00 3.41
691 734 4.948608 TCGTATGTCTCAAGTCTCAGTC 57.051 45.455 0.00 0.00 0.00 3.51
692 735 5.004448 TCTTCGTATGTCTCAAGTCTCAGT 58.996 41.667 0.00 0.00 0.00 3.41
693 736 5.553290 TCTTCGTATGTCTCAAGTCTCAG 57.447 43.478 0.00 0.00 0.00 3.35
694 737 6.151144 TCAATCTTCGTATGTCTCAAGTCTCA 59.849 38.462 0.00 0.00 0.00 3.27
695 738 6.556212 TCAATCTTCGTATGTCTCAAGTCTC 58.444 40.000 0.00 0.00 0.00 3.36
696 739 6.516739 TCAATCTTCGTATGTCTCAAGTCT 57.483 37.500 0.00 0.00 0.00 3.24
697 740 6.237332 CGTTCAATCTTCGTATGTCTCAAGTC 60.237 42.308 0.00 0.00 0.00 3.01
698 741 5.573282 CGTTCAATCTTCGTATGTCTCAAGT 59.427 40.000 0.00 0.00 0.00 3.16
699 742 5.499334 GCGTTCAATCTTCGTATGTCTCAAG 60.499 44.000 0.00 0.00 0.00 3.02
700 743 4.326278 GCGTTCAATCTTCGTATGTCTCAA 59.674 41.667 0.00 0.00 0.00 3.02
701 744 3.857665 GCGTTCAATCTTCGTATGTCTCA 59.142 43.478 0.00 0.00 0.00 3.27
702 745 3.857665 TGCGTTCAATCTTCGTATGTCTC 59.142 43.478 0.00 0.00 0.00 3.36
703 746 3.845178 TGCGTTCAATCTTCGTATGTCT 58.155 40.909 0.00 0.00 0.00 3.41
704 747 4.577687 TTGCGTTCAATCTTCGTATGTC 57.422 40.909 0.00 0.00 0.00 3.06
705 748 5.351233 TTTTGCGTTCAATCTTCGTATGT 57.649 34.783 0.00 0.00 31.33 2.29
725 768 6.156932 GGCGACGTTAGTTACAGTATTTTT 57.843 37.500 0.00 0.00 0.00 1.94
726 769 5.768333 GGCGACGTTAGTTACAGTATTTT 57.232 39.130 0.00 0.00 0.00 1.82
780 823 9.827411 CCTTTTTGCACTTCTTTAATCTACTAC 57.173 33.333 0.00 0.00 0.00 2.73
781 824 9.787435 TCCTTTTTGCACTTCTTTAATCTACTA 57.213 29.630 0.00 0.00 0.00 1.82
782 825 8.691661 TCCTTTTTGCACTTCTTTAATCTACT 57.308 30.769 0.00 0.00 0.00 2.57
783 826 9.399403 CTTCCTTTTTGCACTTCTTTAATCTAC 57.601 33.333 0.00 0.00 0.00 2.59
943 1006 0.531200 ATTCGTCCGGTCAAGGTCTC 59.469 55.000 0.00 0.00 0.00 3.36
1048 1115 1.069358 GCCCAAGAGGACGAATAGGAG 59.931 57.143 0.00 0.00 38.24 3.69
1049 1116 1.120530 GCCCAAGAGGACGAATAGGA 58.879 55.000 0.00 0.00 38.24 2.94
1050 1117 0.249489 CGCCCAAGAGGACGAATAGG 60.249 60.000 0.00 0.00 38.24 2.57
1090 1157 1.610624 GCTCCCGTTCTTGGACATGAA 60.611 52.381 0.00 0.00 0.00 2.57
1096 1163 2.646175 CCTCGCTCCCGTTCTTGGA 61.646 63.158 0.00 0.00 35.54 3.53
1272 1339 4.840005 GCTGGAGGTGTAGGCGCC 62.840 72.222 21.89 21.89 45.35 6.53
1375 1442 0.939577 CACCTCACCACGAACACGAG 60.940 60.000 0.00 0.00 0.00 4.18
1415 1482 2.032924 AGAATTAATTAACCAGCCGCGC 59.967 45.455 0.00 0.00 0.00 6.86
1420 1487 8.957466 AGTGGTAGAAAGAATTAATTAACCAGC 58.043 33.333 0.00 4.61 35.29 4.85
1454 1521 1.449601 CAGATACACCCCCACACGC 60.450 63.158 0.00 0.00 0.00 5.34
1455 1522 1.187974 TACAGATACACCCCCACACG 58.812 55.000 0.00 0.00 0.00 4.49
1457 1524 2.092646 GCAATACAGATACACCCCCACA 60.093 50.000 0.00 0.00 0.00 4.17
1478 1545 3.577649 TTGAGCTCGACTGTTTCTAGG 57.422 47.619 9.64 0.00 0.00 3.02
1483 1550 3.487544 GCAAGTTTTGAGCTCGACTGTTT 60.488 43.478 15.29 1.68 0.00 2.83
1485 1552 1.599542 GCAAGTTTTGAGCTCGACTGT 59.400 47.619 15.29 6.03 0.00 3.55
1486 1553 1.069636 GGCAAGTTTTGAGCTCGACTG 60.070 52.381 15.29 11.37 0.00 3.51
1488 1555 0.238553 GGGCAAGTTTTGAGCTCGAC 59.761 55.000 9.64 7.86 0.00 4.20
1489 1556 0.179032 TGGGCAAGTTTTGAGCTCGA 60.179 50.000 9.64 3.88 0.00 4.04
1501 1568 1.895798 TGAGTGAGTAGAGTGGGCAAG 59.104 52.381 0.00 0.00 0.00 4.01
1535 1602 2.222678 GTCGATTCGCGGTGATACTAGA 59.777 50.000 6.13 0.00 41.33 2.43
1886 1959 3.530104 GCGACGTACTTGGCGACG 61.530 66.667 0.00 5.39 46.25 5.12
2111 2465 4.484236 CTTGCAGTTGTTGAGAAACACAA 58.516 39.130 0.00 0.00 31.49 3.33
2122 2476 2.542907 CGGCGTCCTTGCAGTTGTT 61.543 57.895 0.00 0.00 36.28 2.83
2123 2477 2.972505 CGGCGTCCTTGCAGTTGT 60.973 61.111 0.00 0.00 36.28 3.32
2177 2552 3.412408 GGCTTGGGGAGGAGGTCC 61.412 72.222 0.00 0.00 46.10 4.46
2188 2572 2.662070 CCATTGCCCTTGGGCTTGG 61.662 63.158 28.37 27.40 34.51 3.61
2189 2573 1.610086 TCCATTGCCCTTGGGCTTG 60.610 57.895 28.37 23.64 34.85 4.01
2190 2574 1.305549 CTCCATTGCCCTTGGGCTT 60.306 57.895 28.37 15.07 34.85 4.35
2191 2575 1.587522 ATCTCCATTGCCCTTGGGCT 61.588 55.000 28.37 9.32 34.85 5.19
2192 2576 0.688749 AATCTCCATTGCCCTTGGGC 60.689 55.000 22.91 22.91 34.85 5.36
2193 2577 1.483415 CAAATCTCCATTGCCCTTGGG 59.517 52.381 0.32 0.32 34.85 4.12
2273 2657 2.283388 ACGCGGAACCTGAGGGTA 60.283 61.111 12.47 0.00 46.67 3.69
2281 2665 2.355481 ACGAGTTGACGCGGAACC 60.355 61.111 12.47 6.40 43.37 3.62
2359 2743 1.878069 CATTCGATGCGAGCGACCA 60.878 57.895 0.00 0.00 37.14 4.02
2498 2882 1.171308 CATCCTCTTGGCCAGTGTTG 58.829 55.000 5.11 0.00 0.00 3.33
2499 2883 0.773644 ACATCCTCTTGGCCAGTGTT 59.226 50.000 5.11 0.00 0.00 3.32
2500 2884 1.279271 GTACATCCTCTTGGCCAGTGT 59.721 52.381 5.11 8.21 0.00 3.55
2501 2885 1.556911 AGTACATCCTCTTGGCCAGTG 59.443 52.381 5.11 3.13 0.00 3.66
2502 2886 1.556911 CAGTACATCCTCTTGGCCAGT 59.443 52.381 5.11 0.28 0.00 4.00
2503 2887 1.745141 GCAGTACATCCTCTTGGCCAG 60.745 57.143 5.11 0.00 0.00 4.85
2504 2888 0.253044 GCAGTACATCCTCTTGGCCA 59.747 55.000 0.00 0.00 0.00 5.36
2505 2889 0.464554 GGCAGTACATCCTCTTGGCC 60.465 60.000 0.00 0.00 0.00 5.36
2790 3947 5.201713 ACGATAGATGATGGATTTGTCGT 57.798 39.130 0.00 0.00 37.93 4.34
2791 3948 5.923114 AGAACGATAGATGATGGATTTGTCG 59.077 40.000 0.00 0.00 36.31 4.35
2792 3949 6.367422 GGAGAACGATAGATGATGGATTTGTC 59.633 42.308 0.00 0.00 41.38 3.18
2793 3950 6.042552 AGGAGAACGATAGATGATGGATTTGT 59.957 38.462 0.00 0.00 41.38 2.83
2804 3961 8.195436 TCGAAATTTACAAGGAGAACGATAGAT 58.805 33.333 0.00 0.00 41.38 1.98
2805 3962 7.541162 TCGAAATTTACAAGGAGAACGATAGA 58.459 34.615 0.00 0.00 41.38 1.98
2806 3963 7.751047 TCGAAATTTACAAGGAGAACGATAG 57.249 36.000 0.00 0.00 46.19 2.08
2807 3964 8.195436 AGATCGAAATTTACAAGGAGAACGATA 58.805 33.333 0.00 0.00 37.00 2.92
2827 4002 2.536761 TGCATGCATGATGAGATCGA 57.463 45.000 30.64 0.00 33.31 3.59
2882 4060 5.503520 CGGCCGGAGAAAATCAAATTACTAC 60.504 44.000 20.10 0.00 0.00 2.73
2995 4179 0.981183 ATAGCCAACCAGACCGTTGA 59.019 50.000 3.10 0.00 44.88 3.18
2996 4180 1.086696 CATAGCCAACCAGACCGTTG 58.913 55.000 0.00 0.00 42.31 4.10
3147 4556 3.127030 GCGGGAAACATTTTCCTGACTAG 59.873 47.826 24.66 8.98 45.63 2.57
3148 4557 3.078837 GCGGGAAACATTTTCCTGACTA 58.921 45.455 24.66 0.00 45.63 2.59
3150 4559 1.886542 AGCGGGAAACATTTTCCTGAC 59.113 47.619 24.66 16.98 45.63 3.51
3152 4561 3.119495 CCTAAGCGGGAAACATTTTCCTG 60.119 47.826 18.55 18.55 45.56 3.86
3153 4562 3.089284 CCTAAGCGGGAAACATTTTCCT 58.911 45.455 15.58 1.09 38.61 3.36
3155 4564 4.022676 TCAACCTAAGCGGGAAACATTTTC 60.023 41.667 0.69 0.00 36.97 2.29
3157 4566 3.492337 TCAACCTAAGCGGGAAACATTT 58.508 40.909 0.69 0.00 36.97 2.32
3161 4570 3.344515 AGAATCAACCTAAGCGGGAAAC 58.655 45.455 0.69 0.00 36.97 2.78
3162 4571 3.606687 GAGAATCAACCTAAGCGGGAAA 58.393 45.455 0.69 0.00 33.15 3.13
3163 4572 2.093128 GGAGAATCAACCTAAGCGGGAA 60.093 50.000 0.69 0.00 36.25 3.97
3165 4574 1.209504 TGGAGAATCAACCTAAGCGGG 59.790 52.381 0.00 0.00 36.25 6.13
3166 4575 2.093447 AGTGGAGAATCAACCTAAGCGG 60.093 50.000 0.00 0.00 41.05 5.52
3167 4576 3.252974 AGTGGAGAATCAACCTAAGCG 57.747 47.619 0.00 0.00 41.05 4.68
3168 4577 4.327680 ACAAGTGGAGAATCAACCTAAGC 58.672 43.478 0.00 0.00 41.05 3.09
3169 4578 4.627467 CGACAAGTGGAGAATCAACCTAAG 59.373 45.833 0.00 0.00 41.05 2.18
3172 4581 2.289694 CCGACAAGTGGAGAATCAACCT 60.290 50.000 0.00 0.00 41.05 3.50
3198 4871 5.173131 GGCAAGAATATTATTTTCGCCAACG 59.827 40.000 14.51 0.00 42.01 4.10
3199 4872 6.019881 GTGGCAAGAATATTATTTTCGCCAAC 60.020 38.462 20.61 13.79 39.60 3.77
3204 4877 7.479980 TGGAAGTGGCAAGAATATTATTTTCG 58.520 34.615 0.00 0.00 0.00 3.46
3227 4900 8.674607 GTTGACTCTACCCTAATTACAAATTGG 58.325 37.037 0.00 0.00 0.00 3.16
3491 5209 7.732025 TCCAAGAAATAACAACTGACTCTACA 58.268 34.615 0.00 0.00 0.00 2.74
3605 5324 1.376037 CTCCCGCTCCAGTTGAACC 60.376 63.158 0.00 0.00 0.00 3.62
3607 5326 2.592993 CCCTCCCGCTCCAGTTGAA 61.593 63.158 0.00 0.00 0.00 2.69
3684 5403 1.375523 GTCGAAATGCGGTGGAGGT 60.376 57.895 0.00 0.00 41.33 3.85
3708 5427 5.297029 GGTGTTTTTCAGTAGATATGGAGCC 59.703 44.000 0.00 0.00 0.00 4.70
3723 5442 4.387559 GGTTCAATTATGCCGGTGTTTTTC 59.612 41.667 1.90 0.00 0.00 2.29
3736 5456 6.153680 TGGCGAACAAATTAGGGTTCAATTAT 59.846 34.615 14.25 0.00 42.67 1.28
3742 5462 2.817844 AGTGGCGAACAAATTAGGGTTC 59.182 45.455 7.24 7.24 39.92 3.62
3771 5492 1.215382 GGCCAAAACCAAGATCGGC 59.785 57.895 0.00 0.00 38.85 5.54
3790 5521 0.605319 ACGACATGGTGCCGAAACAT 60.605 50.000 0.00 0.00 0.00 2.71
3831 5563 2.122768 ACAAGGGATGATGGAGAGGTC 58.877 52.381 0.00 0.00 0.00 3.85
3851 5583 1.625315 CCCGGATCATCATAGGAGCAA 59.375 52.381 0.73 0.00 0.00 3.91
3881 5613 8.225416 ACTAATTCTTCTTCCAACTAAACCCTT 58.775 33.333 0.00 0.00 0.00 3.95
3882 5614 7.756614 ACTAATTCTTCTTCCAACTAAACCCT 58.243 34.615 0.00 0.00 0.00 4.34
3883 5615 7.997773 ACTAATTCTTCTTCCAACTAAACCC 57.002 36.000 0.00 0.00 0.00 4.11
3892 5624 9.462606 GGAGGAAAAATACTAATTCTTCTTCCA 57.537 33.333 9.30 0.00 38.35 3.53
3903 5635 9.581289 TGAACATTTGAGGAGGAAAAATACTAA 57.419 29.630 0.00 0.00 0.00 2.24
3905 5637 7.505585 TGTGAACATTTGAGGAGGAAAAATACT 59.494 33.333 0.00 0.00 0.00 2.12
3906 5638 7.657336 TGTGAACATTTGAGGAGGAAAAATAC 58.343 34.615 0.00 0.00 0.00 1.89
3907 5639 7.831691 TGTGAACATTTGAGGAGGAAAAATA 57.168 32.000 0.00 0.00 0.00 1.40
3909 5641 6.729690 ATGTGAACATTTGAGGAGGAAAAA 57.270 33.333 0.00 0.00 31.37 1.94
3949 5681 2.176045 GTACACCAAAATTCCTGGGGG 58.824 52.381 12.24 6.40 42.12 5.40
3950 5682 2.883026 TGTACACCAAAATTCCTGGGG 58.117 47.619 7.14 7.14 43.57 4.96
3951 5683 3.447229 GGATGTACACCAAAATTCCTGGG 59.553 47.826 0.00 3.57 38.36 4.45
3952 5684 3.128589 CGGATGTACACCAAAATTCCTGG 59.871 47.826 0.00 5.22 40.05 4.45
3953 5685 3.427503 GCGGATGTACACCAAAATTCCTG 60.428 47.826 0.00 0.00 0.00 3.86
3954 5686 2.752903 GCGGATGTACACCAAAATTCCT 59.247 45.455 0.00 0.00 0.00 3.36
3955 5687 2.159296 GGCGGATGTACACCAAAATTCC 60.159 50.000 0.00 0.00 0.00 3.01
3956 5688 2.490115 TGGCGGATGTACACCAAAATTC 59.510 45.455 0.00 0.00 0.00 2.17
3957 5689 2.520069 TGGCGGATGTACACCAAAATT 58.480 42.857 0.00 0.00 0.00 1.82
3958 5690 2.208132 TGGCGGATGTACACCAAAAT 57.792 45.000 0.00 0.00 0.00 1.82
3959 5691 2.208132 ATGGCGGATGTACACCAAAA 57.792 45.000 6.99 0.00 35.41 2.44
3960 5692 1.815613 CAATGGCGGATGTACACCAAA 59.184 47.619 6.99 0.00 35.41 3.28
3961 5693 1.271652 ACAATGGCGGATGTACACCAA 60.272 47.619 6.99 0.00 35.41 3.67
3962 5694 0.326595 ACAATGGCGGATGTACACCA 59.673 50.000 0.00 0.70 36.43 4.17
3963 5695 0.732571 CACAATGGCGGATGTACACC 59.267 55.000 0.00 0.71 0.00 4.16
3964 5696 1.448985 ACACAATGGCGGATGTACAC 58.551 50.000 0.00 0.00 0.00 2.90
3965 5697 2.080693 GAACACAATGGCGGATGTACA 58.919 47.619 0.00 0.00 0.00 2.90
3966 5698 2.356135 AGAACACAATGGCGGATGTAC 58.644 47.619 0.00 0.00 0.00 2.90
3967 5699 2.779755 AGAACACAATGGCGGATGTA 57.220 45.000 0.00 0.00 0.00 2.29
3968 5700 2.779755 TAGAACACAATGGCGGATGT 57.220 45.000 0.00 0.00 0.00 3.06
3969 5701 3.470709 AGATAGAACACAATGGCGGATG 58.529 45.455 0.00 0.00 0.00 3.51
3970 5702 3.845781 AGATAGAACACAATGGCGGAT 57.154 42.857 0.00 0.00 0.00 4.18
3971 5703 3.627395 AAGATAGAACACAATGGCGGA 57.373 42.857 0.00 0.00 0.00 5.54
3972 5704 3.941483 AGAAAGATAGAACACAATGGCGG 59.059 43.478 0.00 0.00 0.00 6.13
3973 5705 4.034510 GGAGAAAGATAGAACACAATGGCG 59.965 45.833 0.00 0.00 0.00 5.69
3974 5706 5.189180 AGGAGAAAGATAGAACACAATGGC 58.811 41.667 0.00 0.00 0.00 4.40
3975 5707 6.538021 CAGAGGAGAAAGATAGAACACAATGG 59.462 42.308 0.00 0.00 0.00 3.16
3976 5708 6.538021 CCAGAGGAGAAAGATAGAACACAATG 59.462 42.308 0.00 0.00 0.00 2.82
3977 5709 6.214412 ACCAGAGGAGAAAGATAGAACACAAT 59.786 38.462 0.00 0.00 0.00 2.71
3978 5710 5.544176 ACCAGAGGAGAAAGATAGAACACAA 59.456 40.000 0.00 0.00 0.00 3.33
3979 5711 5.087323 ACCAGAGGAGAAAGATAGAACACA 58.913 41.667 0.00 0.00 0.00 3.72
3980 5712 5.186021 TGACCAGAGGAGAAAGATAGAACAC 59.814 44.000 0.00 0.00 0.00 3.32
3981 5713 5.333581 TGACCAGAGGAGAAAGATAGAACA 58.666 41.667 0.00 0.00 0.00 3.18
3982 5714 5.923733 TGACCAGAGGAGAAAGATAGAAC 57.076 43.478 0.00 0.00 0.00 3.01
3983 5715 5.960811 ACATGACCAGAGGAGAAAGATAGAA 59.039 40.000 0.00 0.00 0.00 2.10
3984 5716 5.362143 CACATGACCAGAGGAGAAAGATAGA 59.638 44.000 0.00 0.00 0.00 1.98
3985 5717 5.362143 TCACATGACCAGAGGAGAAAGATAG 59.638 44.000 0.00 0.00 0.00 2.08
3986 5718 5.272402 TCACATGACCAGAGGAGAAAGATA 58.728 41.667 0.00 0.00 0.00 1.98
3987 5719 4.099633 TCACATGACCAGAGGAGAAAGAT 58.900 43.478 0.00 0.00 0.00 2.40
3988 5720 3.510459 TCACATGACCAGAGGAGAAAGA 58.490 45.455 0.00 0.00 0.00 2.52
3989 5721 3.859443 CTCACATGACCAGAGGAGAAAG 58.141 50.000 0.00 0.00 0.00 2.62
3990 5722 2.027745 GCTCACATGACCAGAGGAGAAA 60.028 50.000 0.00 0.00 0.00 2.52
3991 5723 1.552337 GCTCACATGACCAGAGGAGAA 59.448 52.381 0.00 0.00 0.00 2.87
3992 5724 1.189752 GCTCACATGACCAGAGGAGA 58.810 55.000 0.00 0.00 0.00 3.71
3993 5725 0.179116 CGCTCACATGACCAGAGGAG 60.179 60.000 0.00 0.00 0.00 3.69
3994 5726 0.900182 ACGCTCACATGACCAGAGGA 60.900 55.000 0.00 0.00 0.00 3.71
3995 5727 0.459237 GACGCTCACATGACCAGAGG 60.459 60.000 0.00 0.00 0.00 3.69
3996 5728 0.459237 GGACGCTCACATGACCAGAG 60.459 60.000 0.00 2.34 0.00 3.35
3997 5729 1.591703 GGACGCTCACATGACCAGA 59.408 57.895 0.00 0.00 0.00 3.86
3998 5730 1.807165 CGGACGCTCACATGACCAG 60.807 63.158 0.00 0.00 0.00 4.00
3999 5731 1.604147 ATCGGACGCTCACATGACCA 61.604 55.000 0.00 0.00 0.00 4.02
4000 5732 0.872021 GATCGGACGCTCACATGACC 60.872 60.000 0.00 0.00 0.00 4.02
4001 5733 0.101399 AGATCGGACGCTCACATGAC 59.899 55.000 0.00 0.00 0.00 3.06
4002 5734 0.817654 AAGATCGGACGCTCACATGA 59.182 50.000 0.00 0.00 0.00 3.07
4003 5735 0.926155 CAAGATCGGACGCTCACATG 59.074 55.000 0.00 0.00 0.00 3.21
4004 5736 0.817654 TCAAGATCGGACGCTCACAT 59.182 50.000 0.00 0.00 0.00 3.21
4005 5737 0.817654 ATCAAGATCGGACGCTCACA 59.182 50.000 0.00 0.00 0.00 3.58
4006 5738 1.590238 CAATCAAGATCGGACGCTCAC 59.410 52.381 0.00 0.00 0.00 3.51
4007 5739 1.926561 CAATCAAGATCGGACGCTCA 58.073 50.000 0.00 0.00 0.00 4.26
4008 5740 0.579156 GCAATCAAGATCGGACGCTC 59.421 55.000 6.48 0.00 0.00 5.03
4009 5741 1.148157 CGCAATCAAGATCGGACGCT 61.148 55.000 10.06 0.00 0.00 5.07
4010 5742 1.145759 TCGCAATCAAGATCGGACGC 61.146 55.000 0.00 0.00 0.00 5.19
4011 5743 1.453524 GATCGCAATCAAGATCGGACG 59.546 52.381 0.00 0.00 34.68 4.79
4012 5744 2.473816 TGATCGCAATCAAGATCGGAC 58.526 47.619 0.00 0.00 44.47 4.79
4013 5745 2.888834 TGATCGCAATCAAGATCGGA 57.111 45.000 0.00 0.00 44.47 4.55
4014 5746 2.747436 TCTGATCGCAATCAAGATCGG 58.253 47.619 7.70 7.70 46.36 4.18
4015 5747 4.986875 AATCTGATCGCAATCAAGATCG 57.013 40.909 0.00 0.00 44.47 3.69
4016 5748 6.057627 ACAAATCTGATCGCAATCAAGATC 57.942 37.500 0.00 0.00 41.33 2.75
4017 5749 6.446781 AACAAATCTGATCGCAATCAAGAT 57.553 33.333 0.00 0.00 41.33 2.40
4018 5750 5.885230 AACAAATCTGATCGCAATCAAGA 57.115 34.783 0.00 0.00 41.33 3.02
4019 5751 7.166970 CCATTAACAAATCTGATCGCAATCAAG 59.833 37.037 0.00 0.00 41.33 3.02
4020 5752 6.974048 CCATTAACAAATCTGATCGCAATCAA 59.026 34.615 0.00 0.00 41.33 2.57
4021 5753 6.318396 TCCATTAACAAATCTGATCGCAATCA 59.682 34.615 0.00 0.00 39.63 2.57
4022 5754 6.728200 TCCATTAACAAATCTGATCGCAATC 58.272 36.000 0.00 0.00 0.00 2.67
4023 5755 6.698008 TCCATTAACAAATCTGATCGCAAT 57.302 33.333 0.00 0.00 0.00 3.56
4024 5756 6.507958 TTCCATTAACAAATCTGATCGCAA 57.492 33.333 0.00 0.00 0.00 4.85
4025 5757 6.698008 ATTCCATTAACAAATCTGATCGCA 57.302 33.333 0.00 0.00 0.00 5.10


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.